Prupe.1G015700_v2.0.a1

ERG2 and Sigma1 receptor like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0011384
Physical Location & Seq
Reverse (-)
1120161 .. 1121977
1817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G015700.1

Sequence Viewer

Length: 1161 bp
ATGTCGTCTAATAAACCGAGTCACTCTCCTAAACCCCGAAGCACCCAAGCAGCCATGAAAACCGTCCTCTCATCTTCGTCAACCACGACGACCACAACATCATCCTCGGTAAAATCGAGCACCACCACCGCCGCCATGGAAGACGACCGATCTGAAAATCGTGACAGCTGCTACTACCCAGGATGCAGAAAAGACGCCAACTGCAAGTGTGACATGTGCTTGGCCAGCATCAATGCCACTCTTGATCTCATGCCTTTTAGCTCCCAGAAAAGCACACTCACCAAGTTCTCAGCTTCAAGGCCCAAGACCAACCGCAGTGTTGAACTCACTCCCATCTCTTTTGATGCTTCGGTTTTGTCCACACCCAGATCAAACTCTTCTCAGATTCCGGTGTCCCCGGGTCGTAAATCGGCTGCAAGATTCAAAGTGAAGGAAAAGATTAAGAAGAGGGAGAGAAATTGGGGTTTTGGGTGTGATTTTTGGAGAATGATTTTGGGTTTAAGCTTGGTTTATTTTGCTGTGTGTGGAGTTTCTAATCTGGTCTCTGGGGCTTTGAAACCTGTTCTATCACCTGAGATGGTGAGAAATGTTGGTGAAAAATCTTGGGTTGTGGATGATTTGAATGGGAGGCTGAGGTTCTTGCAGAAAGAGGTGCAGGGTCTTGTTCAAGGAAAGGTTTCAAATTGCAGCTATTCTAATTCTATATGGGAAATTAGTCAGGATGGTTTGCTTCTGAGCTCACATTGCACATTATATAAATCTGCAATTGAGGAGGTGAGCGTATGGGGATGGCCTTTGCAGACCGCAGGGTTGCTCACAAGTGGATTTTCTTCCCGGTCTTTCACAATCTTATCCGGCAGAGTCACAGAGTGGTCGGATGGAAAGCTTGGCTATGTGATTCGAAAGGCAAACACTTCCTGGGTGCAGAAAAATTGGGGTGCCTCAGCTGTGCAGTTAGATCCGAATACATGGATTCTTGAGTACCAGTGGAGCTCAACATTTGATAGCCAAAGATTGGTTTCCGCTGCAATAGCCTTTTTGAAGAATAGGATGTCAAGAATGCTTGGAAGTATGAAGCAGAAGTTTTGGCTCTGCTCTACCTTTGGAAACAACCAGTACCTTCAAACTGCTGCAGAATATAACATCAAAATCCCAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ERG2_Sigma1R

Protein Analysis

387

Amino Acids

42.79

Weight (kDa)

9.63

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011384)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05440
fragaria_vesca FvH4_4g16270
malus_domestica MD13G1194900.v1.1 MD16G1195700.v1.1
prunus_persica Prupe.1G015700_v2.0.a1
pyrus_communis pycom03g13620 pycom07g11900 pycom13g16710 pycom16g16490
rosa_chinensis RchiOBHm_Chr4g0415861
rosa_laevigata RLG00000008033
rosa_multiflora Rmu_co8517385.1_g000002 Rmu_sc0002438.1_g000006
rosa_roxburghii Rroxscaffold_5G00359720
rosa_rugosa Rorug04G0137000
rosa_samantha Rh4AG198900 Rh4BG196900 Rh4CG209800 Rh4DG196800
rosa_wichuraiana Rw4G016850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 938
AccB7I CCANNNNNTGG 1 cut(s) 1015
AciI CCGC 5 cut(s) 129, 132, 313, 804, 1023
AclWI GGATC 1 cut(s) 953
AcoI YGGCCR 1 cut(s) 222
AcyI GRCGYC 1 cut(s) 195
AdeI CACNNNGTG 1 cut(s) 870
AfaI GTAC 2 cut(s) 983, 1118
AfiI CCNNNNNNNGG 1 cut(s) 1015
AflIII ACRYGT 1 cut(s) 213
AgsI TTSAA 9 cut(s) 297, 323, 424, 556, 622, 668, 681, 1042, 1124
AjnI CCWGG 2 cut(s) 178, 917
AluBI AGCT 9 cut(s) 168, 261, 293, 504, 690, 738, 886, 947, 993
AluI AGCT 9 cut(s) 168, 261, 293, 504, 690, 738, 886, 947, 993
Alw21I GWGCWC 3 cut(s) 122, 740, 995
Alw26I GTCTC 1 cut(s) 547
AlwI GGATC 1 cut(s) 953
Ama87I CYCGRG 1 cut(s) 397
AoxI GGCC 3 cut(s) 222, 299, 791
ApeKI GCWGC 6 cut(s) 50, 168, 413, 687, 1025, 1130
Asp700I GAANNNNTTC 1 cut(s) 676
AspS9I GGNCC 1 cut(s) 300
AsuC2I CCSGG 3 cut(s) 398, 399, 835
AsuHPI GGTGA 5 cut(s) 271, 561, 592, 605, 787
AsuII TTCGAA 1 cut(s) 901
AvaI CYCGRG 1 cut(s) 397
BalI TGGCCA 1 cut(s) 224
BanI GGYRCC 1 cut(s) 938
BanII GRGCYC 2 cut(s) 740, 995
BbsI GAAGAC 1 cut(s) 147
Bbv12I GWGCWC 3 cut(s) 122, 740, 995
BbvCI CCTCAGC 2 cut(s) 632, 943
BbvI GCAGC 6 cut(s) 62, 155, 400, 699, 1012, 1117
BccI CCATC 5 cut(s) 341, 571, 716, 783, 872
BciT130I CCWGG 2 cut(s) 180, 919
BcnI CCSGG 3 cut(s) 398, 399, 835
BcoDI GTCTC 1 cut(s) 547
BfmI CTRYAG 1 cut(s) 1131
BisI GCNGC 7 cut(s) 51, 132, 169, 414, 688, 1026, 1131
BlsI GCNGC 7 cut(s) 52, 133, 170, 415, 689, 1027, 1132
Bme1390I CCNGG 5 cut(s) 180, 398, 399, 835, 919
BmeT110I CYCGRG 1 cut(s) 397
BmgT120I GGNCC 1 cut(s) 300
BmiI GGNNCC 1 cut(s) 940
BmrFI CCNGG 5 cut(s) 180, 398, 399, 835, 919
BmsI GCATC 3 cut(s) 173, 237, 334
BpiI GAAGAC 1 cut(s) 147
BplI GAGNNNNNCTC 2 cut(s) 10, 42
Bpu10I CCTNAGC 2 cut(s) 632, 943
Bpu14I TTCGAA 1 cut(s) 901
BpuEI CTTGAG 1 cut(s) 998
BpuMI CCSGG 3 cut(s) 398, 399, 835
BsaHI GRCGYC 1 cut(s) 195
BsaI GGTCTC 1 cut(s) 547
BsaJI CCNNGG 6 cut(s) 105, 135, 178, 396, 397, 918
BsaWI WCCGGW 1 cut(s) 388
Bsc4I CCNNNNNNNGG 1 cut(s) 1015
Bse1I ACTGG 2 cut(s) 985, 1114
Bse3DI GCAATG 1 cut(s) 742
BseBI CCWGG 2 cut(s) 180, 919
BseDI CCNNGG 6 cut(s) 105, 135, 178, 396, 397, 918
BseGI GGATG 7 cut(s) 101, 188, 619, 727, 794, 883, 1056
BseLI CCNNNNNNNGG 1 cut(s) 1015
BseMI GCAATG 1 cut(s) 742
BseMII CTCAG 6 cut(s) 303, 395, 564, 623, 725, 957
BseNI ACTGG 2 cut(s) 985, 1114
BseRI GAGGAG 1 cut(s) 785
BseXI GCAGC 6 cut(s) 62, 155, 400, 699, 1012, 1117
BsgI GTGCAG 3 cut(s) 674, 944, 971
Bsh1285I CGRYCG 1 cut(s) 148
BshFI GGCC 3 cut(s) 224, 301, 793
BshNI GGYRCC 1 cut(s) 938
BsiEI CGRYCG 1 cut(s) 148
BsiHKAI GWGCWC 3 cut(s) 122, 740, 995
BsiHKCI CYCGRG 1 cut(s) 397
BsiSI CCGG 4 cut(s) 389, 398, 835, 855
BslFI GGGAC 1 cut(s) 379
BslI CCNNNNNNNGG 1 cut(s) 1015
BsmAI GTCTC 1 cut(s) 547
BsmFI GGGAC 1 cut(s) 379
BsmI GAATGC 1 cut(s) 1065
BsnI GGCC 3 cut(s) 224, 301, 793
Bso31I GGTCTC 1 cut(s) 547
BsoBI CYCGRG 1 cut(s) 397
Bsp119I TTCGAA 1 cut(s) 901
Bsp1286I GDGCHC 3 cut(s) 122, 740, 995
Bsp143I GATC 4 cut(s) 149, 244, 368, 958
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 5 cut(s) 129, 132, 313, 804, 1023
BspANI GGCC 3 cut(s) 224, 301, 793
BspCNI CTCAG 6 cut(s) 302, 394, 565, 624, 726, 956
BspLI GGNNCC 1 cut(s) 940
BspMAI CTGCAG 1 cut(s) 1135
BspPI GGATC 1 cut(s) 953
BspT104I TTCGAA 1 cut(s) 901
BspT107I GGYRCC 1 cut(s) 938
BspTNI GGTCTC 1 cut(s) 547
BsrDI GCAATG 1 cut(s) 742
BsrI ACTGG 2 cut(s) 985, 1114
BssECI CCNNGG 6 cut(s) 105, 135, 178, 396, 397, 918
BssMI GATC 4 cut(s) 149, 244, 368, 958
BssNI GRCGYC 1 cut(s) 195
BssT1I CCWWGG 1 cut(s) 135
Bst2UI CCWGG 2 cut(s) 180, 919
Bst4CI ACNGT 1 cut(s) 64
Bst6I CTCTTC 2 cut(s) 382, 440
BstACI GRCGYC 1 cut(s) 195
BstBI TTCGAA 1 cut(s) 901
BstC8I GCNNGC 1 cut(s) 226
BstDEI CTNAG 6 cut(s) 289, 381, 573, 632, 734, 943
BstDSI CCRYGG 1 cut(s) 135
BstF5I GGATG 7 cut(s) 101, 188, 619, 727, 794, 883, 1056
BstKTI GATC 4 cut(s) 152, 247, 371, 961
BstMAI GTCTC 1 cut(s) 547
BstMBI GATC 4 cut(s) 149, 244, 368, 958
BstMCI CGRYCG 1 cut(s) 148
BstMWI GCNNNNNNNGC 3 cut(s) 225, 744, 1031
BstNI CCWGG 2 cut(s) 180, 919
BstNSI RCATGY 1 cut(s) 217
BstSCI CCNGG 5 cut(s) 178, 396, 397, 833, 917
BstSFI CTRYAG 1 cut(s) 1131
BstV1I GCAGC 6 cut(s) 62, 155, 400, 699, 1012, 1117
BstV2I GAAGAC 1 cut(s) 147
BstX2I RGATCY 1 cut(s) 958
BstYI RGATCY 1 cut(s) 958
BsuRI GGCC 3 cut(s) 224, 301, 793
BtgI CCRYGG 1 cut(s) 135
BtsCI GGATG 7 cut(s) 101, 188, 619, 727, 794, 883, 1056
BtsI GCAGTG 1 cut(s) 322
BtsIMutI CAGTG 2 cut(s) 322, 992
Cac8I GCNNGC 1 cut(s) 226
Cfr13I GGNCC 1 cut(s) 300
Cfr9I CCCGGG 1 cut(s) 397
CseI GACGC 1 cut(s) 203
Csp6I GTAC 2 cut(s) 982, 1117
CviAII CATG 5 cut(s) 55, 136, 214, 250, 969
CviQI GTAC 2 cut(s) 982, 1117
DdeI CTNAG 6 cut(s) 289, 381, 573, 632, 734, 943
DpnI GATC 4 cut(s) 151, 246, 370, 960
DpnII GATC 4 cut(s) 149, 244, 368, 958
DraIII CACNNNGTG 1 cut(s) 870
EaeI YGGCCR 1 cut(s) 222
Eam1104I CTCTTC 2 cut(s) 382, 440
EarI CTCTTC 2 cut(s) 382, 440
Ecl136II GAGCTC 2 cut(s) 738, 993
Eco130I CCWWGG 1 cut(s) 135
Eco24I GRGCYC 2 cut(s) 740, 995
Eco31I GGTCTC 1 cut(s) 547
Eco53kI GAGCTC 2 cut(s) 738, 993
Eco88I CYCGRG 1 cut(s) 397
EcoICRI GAGCTC 2 cut(s) 738, 993
EcoRII CCWGG 2 cut(s) 178, 917
EcoT14I CCWWGG 1 cut(s) 135
EcoT38I GRGCYC 2 cut(s) 740, 995
ErhI CCWWGG 1 cut(s) 135
FaeI CATG 5 cut(s) 58, 139, 217, 253, 972
FaqI GGGAC 1 cut(s) 379
FatI CATG 5 cut(s) 54, 135, 213, 249, 968
Fnu4HI GCNGC 7 cut(s) 51, 132, 169, 414, 688, 1026, 1131
FokI GGATG 7 cut(s) 88, 195, 626, 734, 801, 890, 1063
FriOI GRGCYC 2 cut(s) 740, 995
Fsp4HI GCNGC 7 cut(s) 51, 132, 169, 414, 688, 1026, 1131
GluI GCNGC 7 cut(s) 51, 132, 169, 414, 688, 1026, 1131
HaeIII GGCC 3 cut(s) 224, 301, 793
HapII CCGG 4 cut(s) 389, 398, 835, 855
HgaI GACGC 1 cut(s) 203
Hin1I GRCGYC 1 cut(s) 195
Hin1II CATG 5 cut(s) 58, 139, 217, 253, 972
HincII GTYRAC 1 cut(s) 81
HindII GTYRAC 1 cut(s) 81
HindIII AAGCTT 2 cut(s) 502, 884
HinfI GANTC 6 cut(s) 19, 385, 420, 861, 898, 973
HpaII CCGG 4 cut(s) 389, 398, 835, 855
HphI GGTGA 5 cut(s) 271, 561, 592, 605, 787
Hpy166II GTNNAC 2 cut(s) 81, 360
Hpy188I TCNGA 5 cut(s) 154, 384, 735, 877, 963
Hpy188III TCNNGA 5 cut(s) 161, 242, 719, 977, 1056
Hpy8I GTNNAC 2 cut(s) 81, 360
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 2 cut(s) 424, 1130
HpyCH4III ACNGT 1 cut(s) 64
HpyF10VI GCNNNNNNNGC 3 cut(s) 225, 744, 1031
HpyF3I CTNAG 6 cut(s) 289, 381, 573, 632, 734, 943
Hsp92I GRCGYC 1 cut(s) 195
Hsp92II CATG 5 cut(s) 58, 139, 217, 253, 972
Kzo9I GATC 4 cut(s) 149, 244, 368, 958
LmnI GCTCC 2 cut(s) 266, 990
Lsp1109I GCAGC 6 cut(s) 62, 155, 400, 699, 1012, 1117
LweI GCATC 3 cut(s) 173, 237, 334
MaeIII GTNAC 4 cut(s) 20, 161, 209, 862
MalI GATC 4 cut(s) 151, 246, 370, 960
MboI GATC 4 cut(s) 149, 244, 368, 958
MboII GAAGA 6 cut(s) 66, 152, 369, 457, 822, 1054
MfeI CAATTG 1 cut(s) 765
MflI RGATCY 1 cut(s) 958
MhlI GDGCHC 3 cut(s) 122, 740, 995
MlsI TGGCCA 1 cut(s) 224
MluCI AATT 6 cut(s) 457, 682, 697, 711, 765, 931
MluNI TGGCCA 1 cut(s) 224
MlyI GAGTC 2 cut(s) 28, 870
MmeI TCCRAC 1 cut(s) 855
MnlI CCTC 9 cut(s) 77, 115, 441, 621, 627, 643, 763, 766, 952
Mox20I TGGCCA 1 cut(s) 224
MroXI GAANNNNTTC 1 cut(s) 676
MscI TGGCCA 1 cut(s) 224
MseI TTAA 2 cut(s) 441, 500
Msp20I TGGCCA 1 cut(s) 224
MspA1I CMGCKG 3 cut(s) 168, 947, 1025
MspI CCGG 4 cut(s) 389, 398, 835, 855
MspR9I CCNGG 5 cut(s) 180, 398, 399, 835, 919
MunI CAATTG 1 cut(s) 765
Mva1269I GAATGC 1 cut(s) 1065
MvaI CCWGG 2 cut(s) 180, 919
MwoI GCNNNNNNNGC 3 cut(s) 225, 744, 1031
NciI CCSGG 3 cut(s) 398, 399, 835
NcoI CCATGG 1 cut(s) 135
NdeII GATC 4 cut(s) 149, 244, 368, 958
NlaIII CATG 5 cut(s) 58, 139, 217, 253, 972
NlaIV GGNNCC 1 cut(s) 940
NmuCI GTSAC 4 cut(s) 20, 161, 209, 862
NspI RCATGY 1 cut(s) 217
NspV TTCGAA 1 cut(s) 901
PciI ACATGT 1 cut(s) 213
PcsI WCGNNNNNNNCGW 2 cut(s) 83, 113
PctI GAATGC 1 cut(s) 1065
PdmI GAANNNNTTC 1 cut(s) 676
PfeI GAWTC 4 cut(s) 385, 420, 898, 973
PflMI CCANNNNNTGG 1 cut(s) 1015
PkrI GCNGC 7 cut(s) 52, 133, 170, 415, 689, 1027, 1132
PleI GAGTC 2 cut(s) 27, 869
PpsI GAGTC 2 cut(s) 27, 869
PscI ACATGT 1 cut(s) 213
Psp124BI GAGCTC 2 cut(s) 740, 995
Psp6I CCWGG 2 cut(s) 178, 917
PspGI CCWGG 2 cut(s) 178, 917
PspN4I GGNNCC 1 cut(s) 940
PspPI GGNCC 1 cut(s) 300
PstI CTGCAG 1 cut(s) 1135
PsuI RGATCY 1 cut(s) 958
PvuII CAGCTG 2 cut(s) 168, 947
RsaI GTAC 2 cut(s) 983, 1118
RsaNI GTAC 2 cut(s) 982, 1117
SacI GAGCTC 2 cut(s) 740, 995
SaqAI TTAA 2 cut(s) 441, 500
SatI GCNGC 7 cut(s) 51, 132, 169, 414, 688, 1026, 1131
Sau3AI GATC 4 cut(s) 149, 244, 368, 958
Sau96I GGNCC 1 cut(s) 300
SchI GAGTC 2 cut(s) 28, 870
ScrFI CCNGG 5 cut(s) 180, 398, 399, 835, 919
SduI GDGCHC 3 cut(s) 122, 740, 995
SfaNI GCATC 3 cut(s) 173, 237, 334
SfcI CTRYAG 1 cut(s) 1131
SfuI TTCGAA 1 cut(s) 901
SmaI CCCGGG 1 cut(s) 399
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
Sse9I AATT 6 cut(s) 457, 682, 697, 711, 765, 931
SsiI CCGC 5 cut(s) 129, 132, 313, 804, 1023
SstI GAGCTC 2 cut(s) 740, 995
StyD4I CCNGG 5 cut(s) 178, 396, 397, 833, 917
StyI CCWWGG 1 cut(s) 135
TaaI ACNGT 1 cut(s) 64
TaqI TCGA 2 cut(s) 116, 901
TaqII GACCGA 1 cut(s) 162
TasI AATT 6 cut(s) 457, 682, 697, 711, 765, 931
TauI GCSGC 1 cut(s) 134
TfiI GAWTC 4 cut(s) 385, 420, 898, 973
Tru1I TTAA 2 cut(s) 441, 500
Tru9I TTAA 2 cut(s) 441, 500
TscAI CASTG 2 cut(s) 322, 992
TseFI GTSAC 4 cut(s) 20, 161, 209, 862
TseI GCWGC 6 cut(s) 50, 168, 413, 687, 1025, 1130
Tsp45I GTSAC 4 cut(s) 20, 161, 209, 862
TspDTI ATGAA 2 cut(s) 71, 1088
TspMI CCCGGG 1 cut(s) 397
TspRI CASTG 2 cut(s) 322, 992
Van91I CCANNNNNTGG 1 cut(s) 1015
XceI RCATGY 1 cut(s) 217
XcmI CCANNNNNNNNNTGG 1 cut(s) 133
XmaI CCCGGG 1 cut(s) 397
XmnI GAANNNNTTC 1 cut(s) 676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.