The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22630 AT4G14800 AT4G14800 |
| fragaria_vesca | FvH4_4g15960 FvH4_7g08790 |
| malus_domestica | MD13G1196600.v1.1 MD16G1197000.v1.1 |
| prunus_persica | Prupe.1G017400_v2.0.a1 Prupe.1G017400_v2.0.a1 |
| pyrus_communis | pycom01g08470 pycom16g16580 |
| rosa_chinensis | RchiOBHm_Chr4g0415561 |
| rosa_laevigata | RLG00000008063 |
| rosa_multiflora | Rmu_sc0004599.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00359380 |
| rosa_rugosa | Rorug04G0134700 |
| rosa_samantha | Rh4AG196100 Rh4BG194800 Rh4CG206800 Rh4DG193600 |
| rosa_wichuraiana | Rw4G016670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 141 |
| AccII | CGCG | 2 cut(s) | 38, 137 |
| AclWI | GGATC | 3 cut(s) | 211, 224, 490 |
| AcoI | YGGCCR | 1 cut(s) | 240 |
| AfaI | GTAC | 1 cut(s) | 176 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 292 |
| AflIII | ACRYGT | 1 cut(s) | 54 |
| AgsI | TTSAA | 1 cut(s) | 380 |
| AjiI | CACGTC | 1 cut(s) | 57 |
| AluBI | AGCT | 1 cut(s) | 262 |
| AluI | AGCT | 1 cut(s) | 262 |
| Alw21I | GWGCWC | 3 cut(s) | 84, 114, 264 |
| Alw44I | GTGCAC | 1 cut(s) | 80 |
| AlwI | GGATC | 3 cut(s) | 211, 224, 490 |
| AoxI | GGCC | 2 cut(s) | 240, 327 |
| ApaLI | GTGCAC | 1 cut(s) | 80 |
| ApeKI | GCWGC | 3 cut(s) | 233, 236, 605 |
| AsuC2I | CCSGG | 2 cut(s) | 150, 331 |
| AsuHPI | GGTGA | 3 cut(s) | 155, 241, 307 |
| BaeGI | GKGCMC | 1 cut(s) | 84 |
| BamHI | GGATCC | 1 cut(s) | 216 |
| BanII | GRGCYC | 2 cut(s) | 150, 264 |
| BbsI | GAAGAC | 1 cut(s) | 102 |
| Bbv12I | GWGCWC | 3 cut(s) | 84, 114, 264 |
| BbvI | GCAGC | 3 cut(s) | 220, 223, 592 |
| BccI | CCATC | 4 cut(s) | 17, 418, 548, 593 |
| BceAI | ACGGC | 2 cut(s) | 46, 47 |
| BcnI | CCSGG | 2 cut(s) | 150, 331 |
| BfaI | CTAG | 1 cut(s) | 597 |
| BisI | GCNGC | 7 cut(s) | 48, 135, 234, 237, 240, 606, 609 |
| BlsI | GCNGC | 7 cut(s) | 49, 136, 235, 238, 241, 607, 610 |
| Bme1390I | CCNGG | 2 cut(s) | 150, 331 |
| BmgBI | CACGTC | 1 cut(s) | 57 |
| BmiI | GGNNCC | 3 cut(s) | 218, 388, 519 |
| BmrFI | CCNGG | 2 cut(s) | 150, 331 |
| BmsI | GCATC | 2 cut(s) | 344, 583 |
| BpiI | GAAGAC | 1 cut(s) | 102 |
| BpuMI | CCSGG | 2 cut(s) | 150, 331 |
| BsaJI | CCNNGG | 2 cut(s) | 253, 330 |
| BsaWI | WCCGGW | 1 cut(s) | 498 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 557, 587 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 292 |
| Bse1I | ACTGG | 1 cut(s) | 81 |
| Bse3DI | GCAATG | 2 cut(s) | 217, 357 |
| BseDI | CCNNGG | 2 cut(s) | 253, 330 |
| BseGI | GGATG | 4 cut(s) | 300, 335, 559, 598 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 292 |
| BseMI | GCAATG | 2 cut(s) | 217, 357 |
| BseNI | ACTGG | 1 cut(s) | 81 |
| BseSI | GKGCMC | 1 cut(s) | 84 |
| BseXI | GCAGC | 3 cut(s) | 220, 223, 592 |
| Bsh1236I | CGCG | 2 cut(s) | 38, 137 |
| Bsh1285I | CGRYCG | 1 cut(s) | 503 |
| BshFI | GGCC | 2 cut(s) | 242, 329 |
| BsiEI | CGRYCG | 1 cut(s) | 503 |
| BsiHKAI | GWGCWC | 3 cut(s) | 84, 114, 264 |
| BsiSI | CCGG | 3 cut(s) | 150, 330, 499 |
| BslFI | GGGAC | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 292 |
| BsmFI | GGGAC | 1 cut(s) | 41 |
| BsnI | GGCC | 2 cut(s) | 242, 329 |
| Bsp1286I | GDGCHC | 4 cut(s) | 84, 114, 150, 264 |
| Bsp143I | GATC | 3 cut(s) | 216, 469, 495 |
| BspANI | GGCC | 2 cut(s) | 242, 329 |
| BspFNI | CGCG | 2 cut(s) | 38, 137 |
| BspLI | GGNNCC | 3 cut(s) | 218, 388, 519 |
| BspPI | GGATC | 3 cut(s) | 211, 224, 490 |
| BsrBI | CCGCTC | 1 cut(s) | 141 |
| BsrDI | GCAATG | 2 cut(s) | 217, 357 |
| BsrI | ACTGG | 1 cut(s) | 81 |
| BssECI | CCNNGG | 2 cut(s) | 253, 330 |
| BssMI | GATC | 3 cut(s) | 216, 469, 495 |
| Bst4CI | ACNGT | 1 cut(s) | 443 |
| BstC8I | GCNNGC | 3 cut(s) | 139, 260, 264 |
| BstDSI | CCRYGG | 1 cut(s) | 253 |
| BstF5I | GGATG | 4 cut(s) | 300, 335, 559, 598 |
| BstFNI | CGCG | 2 cut(s) | 38, 137 |
| BstKTI | GATC | 3 cut(s) | 219, 472, 498 |
| BstMBI | GATC | 3 cut(s) | 216, 469, 495 |
| BstMCI | CGRYCG | 1 cut(s) | 503 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 44, 239, 602 |
| BstNSI | RCATGY | 1 cut(s) | 451 |
| BstSCI | CCNGG | 2 cut(s) | 148, 329 |
| BstSLI | GKGCMC | 1 cut(s) | 84 |
| BstUI | CGCG | 2 cut(s) | 38, 137 |
| BstV1I | GCAGC | 3 cut(s) | 220, 223, 592 |
| BstV2I | GAAGAC | 1 cut(s) | 102 |
| BstX2I | RGATCY | 2 cut(s) | 216, 495 |
| BstYI | RGATCY | 2 cut(s) | 216, 495 |
| BsuRI | GGCC | 2 cut(s) | 242, 329 |
| BtgI | CCRYGG | 1 cut(s) | 253 |
| BtrI | CACGTC | 1 cut(s) | 57 |
| BtsCI | GGATG | 4 cut(s) | 300, 335, 559, 598 |
| BtsI | GCAGTG | 1 cut(s) | 228 |
| BtsIMutI | CAGTG | 3 cut(s) | 228, 419, 448 |
| Cac8I | GCNNGC | 3 cut(s) | 139, 260, 264 |
| Csp6I | GTAC | 1 cut(s) | 175 |
| CviAII | CATG | 4 cut(s) | 106, 292, 448, 612 |
| CviQI | GTAC | 1 cut(s) | 175 |
| DpnI | GATC | 3 cut(s) | 218, 471, 497 |
| DpnII | GATC | 3 cut(s) | 216, 469, 495 |
| EaeI | YGGCCR | 1 cut(s) | 240 |
| EciI | GGCGGA | 1 cut(s) | 65 |
| Ecl136II | GAGCTC | 1 cut(s) | 262 |
| Eco24I | GRGCYC | 2 cut(s) | 150, 264 |
| Eco53kI | GAGCTC | 1 cut(s) | 262 |
| EcoICRI | GAGCTC | 1 cut(s) | 262 |
| EcoT38I | GRGCYC | 2 cut(s) | 150, 264 |
| FaeI | CATG | 4 cut(s) | 109, 295, 451, 615 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 374, 406 |
| FaqI | GGGAC | 1 cut(s) | 41 |
| FatI | CATG | 4 cut(s) | 105, 291, 447, 611 |
| FauI | CCCGC | 1 cut(s) | 570 |
| Fnu4HI | GCNGC | 7 cut(s) | 48, 135, 234, 237, 240, 606, 609 |
| FokI | GGATG | 4 cut(s) | 287, 322, 566, 605 |
| FriOI | GRGCYC | 2 cut(s) | 150, 264 |
| Fsp4HI | GCNGC | 7 cut(s) | 48, 135, 234, 237, 240, 606, 609 |
| FspBI | CTAG | 1 cut(s) | 597 |
| GluI | GCNGC | 7 cut(s) | 48, 135, 234, 237, 240, 606, 609 |
| HaeIII | GGCC | 2 cut(s) | 242, 329 |
| HapII | CCGG | 3 cut(s) | 150, 330, 499 |
| Hin1II | CATG | 4 cut(s) | 109, 295, 451, 615 |
| HincII | GTYRAC | 1 cut(s) | 547 |
| HindII | GTYRAC | 1 cut(s) | 547 |
| HinfI | GANTC | 3 cut(s) | 5, 116, 581 |
| HpaII | CCGG | 3 cut(s) | 150, 330, 499 |
| HphI | GGTGA | 3 cut(s) | 155, 241, 307 |
| Hpy166II | GTNNAC | 4 cut(s) | 82, 168, 298, 547 |
| Hpy188III | TCNNGA | 1 cut(s) | 538 |
| Hpy8I | GTNNAC | 4 cut(s) | 82, 168, 298, 547 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyCH4III | ACNGT | 1 cut(s) | 443 |
| HpyCH4IV | ACGT | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 3 cut(s) | 67, 82, 486 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 44, 239, 602 |
| HpySE526I | ACGT | 1 cut(s) | 56 |
| Hsp92II | CATG | 4 cut(s) | 109, 295, 451, 615 |
| Kzo9I | GATC | 3 cut(s) | 216, 469, 495 |
| LmnI | GCTCC | 2 cut(s) | 386, 523 |
| LpnPI | CCDG | 9 cut(s) | 62, 163, 297, 343, 415, 458, 494, 512, 574 |
| Lsp1109I | GCAGC | 3 cut(s) | 220, 223, 592 |
| LweI | GCATC | 2 cut(s) | 344, 583 |
| MaeI | CTAG | 1 cut(s) | 597 |
| MaeII | ACGT | 1 cut(s) | 56 |
| MalI | GATC | 3 cut(s) | 218, 471, 497 |
| MbiI | CCGCTC | 1 cut(s) | 141 |
| MboI | GATC | 3 cut(s) | 216, 469, 495 |
| MboII | GAAGA | 2 cut(s) | 4, 107 |
| MfeI | CAATTG | 1 cut(s) | 465 |
| MflI | RGATCY | 2 cut(s) | 216, 495 |
| MhlI | GDGCHC | 4 cut(s) | 84, 114, 150, 264 |
| MluCI | AATT | 3 cut(s) | 244, 465, 526 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MnlI | CCTC | 5 cut(s) | 319, 373, 451, 498, 555 |
| MslI | CAYNNNNRTG | 3 cut(s) | 77, 305, 452 |
| MspI | CCGG | 3 cut(s) | 150, 330, 499 |
| MspR9I | CCNGG | 2 cut(s) | 150, 331 |
| MunI | CAATTG | 1 cut(s) | 465 |
| MvnI | CGCG | 2 cut(s) | 38, 137 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 44, 239, 602 |
| NciI | CCSGG | 2 cut(s) | 150, 331 |
| NdeII | GATC | 3 cut(s) | 216, 469, 495 |
| NlaIII | CATG | 4 cut(s) | 109, 295, 451, 615 |
| NlaIV | GGNNCC | 3 cut(s) | 218, 388, 519 |
| NspI | RCATGY | 1 cut(s) | 451 |
| PfeI | GAWTC | 2 cut(s) | 116, 581 |
| PkrI | GCNGC | 7 cut(s) | 49, 136, 235, 238, 241, 607, 610 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| Psp124BI | GAGCTC | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 3 cut(s) | 218, 388, 519 |
| PsuI | RGATCY | 2 cut(s) | 216, 495 |
| RsaI | GTAC | 1 cut(s) | 176 |
| RsaNI | GTAC | 1 cut(s) | 175 |
| RseI | CAYNNNNRTG | 3 cut(s) | 77, 305, 452 |
| SacI | GAGCTC | 1 cut(s) | 264 |
| SatI | GCNGC | 7 cut(s) | 48, 135, 234, 237, 240, 606, 609 |
| Sau3AI | GATC | 3 cut(s) | 216, 469, 495 |
| SchI | GAGTC | 1 cut(s) | 14 |
| ScrFI | CCNGG | 2 cut(s) | 150, 331 |
| SduI | GDGCHC | 4 cut(s) | 84, 114, 150, 264 |
| SetI | ASST | 3 cut(s) | 59, 264, 378 |
| SfaNI | GCATC | 2 cut(s) | 344, 583 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 77, 305, 452 |
| Sse9I | AATT | 3 cut(s) | 244, 465, 526 |
| SspMI | CTAG | 1 cut(s) | 597 |
| SstI | GAGCTC | 1 cut(s) | 264 |
| StyD4I | CCNGG | 2 cut(s) | 148, 329 |
| TaaI | ACNGT | 1 cut(s) | 443 |
| TaiI | ACGT | 1 cut(s) | 59 |
| TaqI | TCGA | 2 cut(s) | 114, 503 |
| TasI | AATT | 3 cut(s) | 244, 465, 526 |
| TatI | WGTACW | 1 cut(s) | 174 |
| TauI | GCSGC | 4 cut(s) | 50, 137, 242, 611 |
| TfiI | GAWTC | 2 cut(s) | 116, 581 |
| TscAI | CASTG | 3 cut(s) | 235, 426, 448 |
| TseI | GCWGC | 3 cut(s) | 233, 236, 605 |
| TspRI | CASTG | 3 cut(s) | 235, 426, 448 |
| VneI | GTGCAC | 1 cut(s) | 80 |
| XceI | RCATGY | 1 cut(s) | 451 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 16 |
| XspI | CTAG | 1 cut(s) | 597 |