Prupe.1G047800_v2.0.a1

Mitochondrial import receptor subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0005799
Physical Location & Seq
Forward (+)
3375123 .. 3375873
751 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G047800.1

Sequence Viewer

Length: 294 bp
ATGGCGGCACAAGGCAGACAGCGACAGTCACTGCGAAACGGCAGCGAGGAGCAGAGCCTGCTTTCCAGGGTATCGCAATCGGGGTTGGTGCAGCAGACGAAGCGAGCGGCGAACGACGCGTCGTTGGTGACGAAGAAGCTGATGAAGAGCACGGGCAAGGCGGCATGGATCTTGGGAACGACATTCCTAATCCTGGGGGTCCCACTGATCATCGCCATGGATCGCGAGCAGCAGTTCAACGAACTCGAGTTGCAGCAGGCCAACATCCTCGGTTCCCCTTCCTCTCTCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tom22

Protein Analysis

98

Amino Acids

10.58

Weight (kDa)

10.27

Isoelectric Point (pI)

71.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 107
AccII CGCG 2 cut(s) 119, 225
AciI CCGC 3 cut(s) 5, 107, 161
AclWI GGATC 2 cut(s) 176, 228
AfiI CCNNNNNNNGG 1 cut(s) 193
AflIII ACRYGT 1 cut(s) 117
AgsI TTSAA 1 cut(s) 238
AjnI CCWGG 2 cut(s) 65, 192
AluBI AGCT 1 cut(s) 139
AluI AGCT 1 cut(s) 139
Alw21I GWGCWC 1 cut(s) 152
AlwI GGATC 2 cut(s) 176, 228
AlwNI CAGNNNCTG 2 cut(s) 31, 58
Ama87I CYCGRG 1 cut(s) 245
AoxI GGCC 1 cut(s) 258
ApeKI GCWGC 4 cut(s) 42, 91, 229, 253
ArsI GACNNNNNNTTYG 2 cut(s) 104, 136
AspS9I GGNCC 1 cut(s) 199
AsuHPI GGTGA 1 cut(s) 139
AvaI CYCGRG 1 cut(s) 245
AvaII GGWCC 1 cut(s) 199
Bbv12I GWGCWC 1 cut(s) 152
BbvI GCAGC 4 cut(s) 54, 103, 241, 265
BceAI ACGGC 1 cut(s) 55
BciT130I CCWGG 2 cut(s) 67, 194
BclI TGATCA 1 cut(s) 207
BisI GCNGC 7 cut(s) 6, 43, 92, 108, 162, 230, 254
BlsI GCNGC 7 cut(s) 7, 44, 93, 109, 163, 231, 255
Bme1390I CCNGG 2 cut(s) 67, 194
Bme18I GGWCC 1 cut(s) 199
BmeT110I CYCGRG 1 cut(s) 245
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 3 cut(s) 200, 201, 274
BmrFI CCNGG 2 cut(s) 67, 194
BpuEI CTTGAG 1 cut(s) 272
BsaJI CCNNGG 4 cut(s) 66, 193, 216, 268
Bsc4I CCNNNNNNNGG 1 cut(s) 193
BseBI CCWGG 2 cut(s) 67, 194
BseDI CCNNGG 4 cut(s) 66, 193, 216, 268
BseGI GGATG 1 cut(s) 264
BseLI CCNNNNNNNGG 1 cut(s) 193
BseRI GAGGAG 1 cut(s) 62
BseXI GCAGC 4 cut(s) 54, 103, 241, 265
BsgI GTGCAG 1 cut(s) 110
Bsh1236I CGCG 2 cut(s) 119, 225
BshFI GGCC 1 cut(s) 260
BsiHKAI GWGCWC 1 cut(s) 152
BsiHKCI CYCGRG 1 cut(s) 245
BslFI GGGAC 1 cut(s) 185
BslI CCNNNNNNNGG 1 cut(s) 193
BsmFI GGGAC 1 cut(s) 185
BsnI GGCC 1 cut(s) 260
BsoBI CYCGRG 1 cut(s) 245
Bsp1286I GDGCHC 1 cut(s) 152
Bsp143I GATC 3 cut(s) 168, 207, 220
Bsp19I CCATGG 1 cut(s) 216
Bsp68I TCGCGA 1 cut(s) 225
BspACI CCGC 3 cut(s) 5, 107, 161
BspANI GGCC 1 cut(s) 260
BspFNI CGCG 2 cut(s) 119, 225
BspLI GGNNCC 3 cut(s) 200, 201, 274
BspPI GGATC 2 cut(s) 176, 228
BspQI GCTCTTC 1 cut(s) 140
BsrBI CCGCTC 1 cut(s) 107
BssECI CCNNGG 4 cut(s) 66, 193, 216, 268
BssMI GATC 3 cut(s) 168, 207, 220
BssT1I CCWWGG 1 cut(s) 216
Bst2UI CCWGG 2 cut(s) 67, 194
Bst4CI ACNGT 1 cut(s) 27
Bst6I CTCTTC 1 cut(s) 140
BstAPI GCANNNNNTGC 1 cut(s) 58
BstC8I GCNNGC 4 cut(s) 59, 105, 227, 258
BstDSI CCRYGG 1 cut(s) 216
BstF5I GGATG 1 cut(s) 264
BstFNI CGCG 2 cut(s) 119, 225
BstKTI GATC 3 cut(s) 171, 210, 223
BstMBI GATC 3 cut(s) 168, 207, 220
BstMWI GCNNNNNNNGC 3 cut(s) 58, 100, 116
BstNI CCWGG 2 cut(s) 67, 194
BstSCI CCNGG 2 cut(s) 65, 192
BstUI CGCG 2 cut(s) 119, 225
BstV1I GCAGC 4 cut(s) 54, 103, 241, 265
BstX2I RGATCY 1 cut(s) 168
BstYI RGATCY 1 cut(s) 168
BsuRI GGCC 1 cut(s) 260
BtgI CCRYGG 1 cut(s) 216
BtgZI GCGATG 1 cut(s) 196
BtsCI GGATG 1 cut(s) 264
BtsI GCAGTG 1 cut(s) 29
BtsIMutI CAGTG 2 cut(s) 29, 203
BtuMI TCGCGA 1 cut(s) 225
Cac8I GCNNGC 4 cut(s) 59, 105, 227, 258
CaiI CAGNNNCTG 2 cut(s) 31, 58
Cfr13I GGNCC 1 cut(s) 199
CseI GACGC 2 cut(s) 108, 125
CviAII CATG 2 cut(s) 165, 217
CviJI RGCY 3 cut(s) 57, 139, 260
CviKI_1 RGCY 3 cut(s) 57, 139, 260
DpnI GATC 3 cut(s) 170, 209, 222
DpnII GATC 3 cut(s) 168, 207, 220
Eam1104I CTCTTC 1 cut(s) 140
EarI CTCTTC 1 cut(s) 140
Eco130I CCWWGG 1 cut(s) 216
Eco47I GGWCC 1 cut(s) 199
Eco88I CYCGRG 1 cut(s) 245
EcoO109I RGGNCCY 1 cut(s) 199
EcoRII CCWGG 2 cut(s) 65, 192
EcoT14I CCWWGG 1 cut(s) 216
ErhI CCWWGG 1 cut(s) 216
FaeI CATG 2 cut(s) 168, 220
FaiI YATR 2 cut(s) 166, 218
FaqI GGGAC 1 cut(s) 185
FatI CATG 2 cut(s) 164, 216
FbaI TGATCA 1 cut(s) 207
Fnu4HI GCNGC 7 cut(s) 6, 43, 92, 108, 162, 230, 254
FokI GGATG 1 cut(s) 251
Fsp4HI GCNGC 7 cut(s) 6, 43, 92, 108, 162, 230, 254
GluI GCNGC 7 cut(s) 6, 43, 92, 108, 162, 230, 254
HaeIII GGCC 1 cut(s) 260
HgaI GACGC 2 cut(s) 108, 125
Hin1II CATG 2 cut(s) 168, 220
HphI GGTGA 1 cut(s) 139
Hpy188III TCNNGA 1 cut(s) 224
Hpy99I CGWCG 2 cut(s) 119, 124
HpyAV CCTTC 1 cut(s) 288
HpyCH4III ACNGT 1 cut(s) 27
HpyCH4V TGCA 2 cut(s) 91, 253
HpyF10VI GCNNNNNNNGC 3 cut(s) 58, 100, 116
Hsp92II CATG 2 cut(s) 168, 220
KflI GGGWCCC 1 cut(s) 199
Ksp22I TGATCA 1 cut(s) 207
Kzo9I GATC 3 cut(s) 168, 207, 220
LguI GCTCTTC 1 cut(s) 140
LmnI GCTCC 1 cut(s) 49
LpnPI CCDG 6 cut(s) 52, 71, 79, 179, 206, 242
Lsp1109I GCAGC 4 cut(s) 54, 103, 241, 265
MaeIII GTNAC 2 cut(s) 27, 127
MalI GATC 3 cut(s) 170, 209, 222
MbiI CCGCTC 1 cut(s) 107
MboI GATC 3 cut(s) 168, 207, 220
MboII GAAGA 2 cut(s) 145, 157
MflI RGATCY 1 cut(s) 168
MhlI GDGCHC 1 cut(s) 152
MluI ACGCGT 1 cut(s) 117
MnlI CCTC 3 cut(s) 40, 278, 292
MslI CAYNNNNRTG 1 cut(s) 215
MspR9I CCNGG 2 cut(s) 67, 194
MvaI CCWGG 2 cut(s) 67, 194
MvnI CGCG 2 cut(s) 119, 225
MwoI GCNNNNNNNGC 3 cut(s) 58, 100, 116
NcoI CCATGG 1 cut(s) 216
NdeII GATC 3 cut(s) 168, 207, 220
NlaIII CATG 2 cut(s) 168, 220
NlaIV GGNNCC 3 cut(s) 200, 201, 274
NmuCI GTSAC 2 cut(s) 27, 127
NruI TCGCGA 1 cut(s) 225
PaeR7I CTCGAG 1 cut(s) 245
PciSI GCTCTTC 1 cut(s) 140
PcsI WCGNNNNNNNCGW 1 cut(s) 128
PkrI GCNGC 7 cut(s) 7, 44, 93, 109, 163, 231, 255
PpuMI RGGWCCY 1 cut(s) 199
Psp5II RGGWCCY 1 cut(s) 199
Psp6I CCWGG 2 cut(s) 65, 192
PspGI CCWGG 2 cut(s) 65, 192
PspN4I GGNNCC 3 cut(s) 200, 201, 274
PspPI GGNCC 1 cut(s) 199
PspPPI RGGWCCY 1 cut(s) 199
PspXI VCTCGAGB 1 cut(s) 245
PstNI CAGNNNCTG 2 cut(s) 31, 58
PsuI RGATCY 1 cut(s) 168
RruI TCGCGA 1 cut(s) 225
RseI CAYNNNNRTG 1 cut(s) 215
SapI GCTCTTC 1 cut(s) 140
SatI GCNGC 7 cut(s) 6, 43, 92, 108, 162, 230, 254
Sau3AI GATC 3 cut(s) 168, 207, 220
Sau96I GGNCC 1 cut(s) 199
ScrFI CCNGG 2 cut(s) 67, 194
SduI GDGCHC 1 cut(s) 152
SetI ASST 1 cut(s) 141
Sfr274I CTCGAG 1 cut(s) 245
SinI GGWCC 1 cut(s) 199
SlaI CTCGAG 1 cut(s) 245
SmiMI CAYNNNNRTG 1 cut(s) 215
SmlI CTYRAG 2 cut(s) 245, 287
SmoI CTYRAG 2 cut(s) 245, 287
SsiI CCGC 3 cut(s) 5, 107, 161
StyD4I CCNGG 2 cut(s) 65, 192
StyI CCWWGG 1 cut(s) 216
TaaI ACNGT 1 cut(s) 27
TaqI TCGA 1 cut(s) 246
TauI GCSGC 3 cut(s) 8, 110, 164
TscAI CASTG 2 cut(s) 36, 210
TseFI GTSAC 2 cut(s) 27, 127
TseI GCWGC 4 cut(s) 42, 91, 229, 253
Tsp45I GTSAC 2 cut(s) 27, 127
TspDTI ATGAA 1 cut(s) 158
TspRI CASTG 2 cut(s) 36, 210
VpaK11BI GGWCC 1 cut(s) 199
XhoI CTCGAG 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.