Prupe.1G060800_v2.0.a1

Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
4280933 .. 4285588
4656 bp
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UTR
Exon/CDS
Intron
Prupe.1G060800.1

Sequence Viewer

Length: 618 bp
ATGGCGCTGCTGGGAGCAAGAGGAAGTGGGCTGGTGCTGCCAAAGCCGGTGACTTTTGTGACTGGCAACGCTAAGAAACTCGAAGAAGTTCGTGCCATCTTGGGCTCCTCCATCCCCTTTCAATCCCTCAGGCTTGACCTTCCAGAATTGCAAGGTGAACCGGAGGAAATCTCCAAAGAAAAGGCTAAGTTGGCTGCTCTTCAGGTAAATGGTCCTGTTCTTGTGGAAGACACTTGCCTCTGCTTCAATGCCCTCAAAGGTCTACCTGGACCTTACATCAAGTGGTTCCTGCAGAAGCTTGGACATGAAGGTCTCTACAATTTGTTGATGGCATACGAGGATAAGTCAGCTTATGCATTGTGTTCCTTCTCTTTTTCCACTGGACCTAGCGTTGAGCCTATTACATTCCTGGGTAAAACTCCGGGGAAAATAGTTCCGGCAAGGGGACCGACTGATTTCGGATGGGATGCAATGTTCCAACCTGATGGTTACGACCAAACTTATGCCGAGATGCCAAAGGAAGAAAAGAACAAGATTTCTCATCGCTCCAGAGCTCTTGCACTGGTGAAGTCTCACTTTGCTGAAGCTGGGTACACTTTCCAGACTAACTCTCTGTAA

Protein Analysis

206

Amino Acids

22.43

Weight (kDa)

6.83

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010856)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 309
AccI GTMKAC 1 cut(s) 262
AcuI CTGAAG 2 cut(s) 185, 603
AfaI GTAC 1 cut(s) 593
AfiI CCNNNNNNNGG 1 cut(s) 443
AgsI TTSAA 2 cut(s) 122, 247
AjnI CCWGG 2 cut(s) 265, 408
AloI GAACNNNNNNTCC 2 cut(s) 458, 490
AluBI AGCT 4 cut(s) 298, 350, 554, 587
AluI AGCT 4 cut(s) 298, 350, 554, 587
Alw21I GWGCWC 1 cut(s) 556
Alw26I GTCTC 2 cut(s) 317, 576
ApeKI GCWGC 3 cut(s) 7, 37, 194
Asp700I GAANNNNTTC 1 cut(s) 87
AspLEI GCGC 1 cut(s) 7
AspS9I GGNCC 4 cut(s) 212, 269, 383, 446
AsuC2I CCSGG 1 cut(s) 423
AsuHPI GGTGA 3 cut(s) 61, 167, 577
AvaII GGWCC 4 cut(s) 212, 269, 383, 446
AxyI CCTNAGG 1 cut(s) 128
BanII GRGCYC 2 cut(s) 107, 556
BbsI GAAGAC 1 cut(s) 234
Bbv12I GWGCWC 1 cut(s) 556
BbvI GCAGC 2 cut(s) 24, 181
BccI CCATC 5 cut(s) 104, 119, 322, 456, 479
BciT130I CCWGG 2 cut(s) 267, 410
BcnI CCSGG 1 cut(s) 423
BcoDI GTCTC 2 cut(s) 317, 576
BfaI CTAG 1 cut(s) 387
BfmI CTRYAG 1 cut(s) 290
BfoI RGCGCY 1 cut(s) 8
BisI GCNGC 3 cut(s) 8, 38, 195
BlsI GCNGC 3 cut(s) 9, 39, 196
Bme1390I CCNGG 3 cut(s) 267, 410, 423
Bme18I GGWCC 4 cut(s) 212, 269, 383, 446
BmgT120I GGNCC 4 cut(s) 212, 269, 383, 446
BmiI GGNNCC 3 cut(s) 106, 287, 447
BmrFI CCNGG 3 cut(s) 267, 410, 423
BmsI GCATC 2 cut(s) 457, 501
BpiI GAAGAC 1 cut(s) 234
BplI GAGNNNNNCTC 2 cut(s) 155, 187
BpmI CTGGAG 1 cut(s) 532
BpuMI CCSGG 1 cut(s) 423
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 2 cut(s) 409, 422
BsaWI WCCGGW 1 cut(s) 160
Bsc4I CCNNNNNNNGG 1 cut(s) 443
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 3 cut(s) 67, 385, 567
Bse21I CCTNAGG 1 cut(s) 128
Bse3DI GCAATG 1 cut(s) 477
BseBI CCWGG 2 cut(s) 267, 410
BseDI CCNNGG 2 cut(s) 409, 422
BseGI GGATG 3 cut(s) 111, 467, 472
BseLI CCNNNNNNNGG 1 cut(s) 443
BseMI GCAATG 1 cut(s) 477
BseMII CTCAG 1 cut(s) 142
BseNI ACTGG 3 cut(s) 67, 385, 567
BseRI GAGGAG 1 cut(s) 97
BseXI GCAGC 2 cut(s) 24, 181
BseYI CCCAGC 2 cut(s) 10, 587
BsiHKAI GWGCWC 1 cut(s) 556
BsiSI CCGG 4 cut(s) 47, 161, 422, 437
BslFI GGGAC 1 cut(s) 459
BslI CCNNNNNNNGG 1 cut(s) 443
BsmAI GTCTC 2 cut(s) 317, 576
BsmFI GGGAC 1 cut(s) 459
Bso31I GGTCTC 1 cut(s) 317
Bsp1286I GDGCHC 2 cut(s) 107, 556
BspCNI CTCAG 1 cut(s) 141
BspLI GGNNCC 3 cut(s) 106, 287, 447
BspMAI CTGCAG 1 cut(s) 294
BspQI GCTCTTC 1 cut(s) 204
BspTNI GGTCTC 1 cut(s) 317
BsrDI GCAATG 1 cut(s) 477
BsrFI RCCGGY 1 cut(s) 46
BsrI ACTGG 3 cut(s) 67, 385, 567
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 2 cut(s) 409, 422
Bst2UI CCWGG 2 cut(s) 267, 410
Bst6I CTCTTC 1 cut(s) 204
BstDEI CTNAG 3 cut(s) 72, 128, 186
BstF5I GGATG 3 cut(s) 111, 467, 472
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 1 cut(s) 7
BstMAI GTCTC 2 cut(s) 317, 576
BstMWI GCNNNNNNNGC 3 cut(s) 37, 43, 191
BstNI CCWGG 2 cut(s) 267, 410
BstSCI CCNGG 3 cut(s) 265, 408, 421
BstSFI CTRYAG 1 cut(s) 290
BstV1I GCAGC 2 cut(s) 24, 181
BstV2I GAAGAC 1 cut(s) 234
BstXI CCANNNNNNTGG 1 cut(s) 485
Bsu36I CCTNAGG 1 cut(s) 128
BtgZI GCGATG 1 cut(s) 527
BtsCI GGATG 3 cut(s) 111, 467, 472
BtsIMutI CAGTG 2 cut(s) 378, 560
CfoI GCGC 1 cut(s) 7
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 4 cut(s) 212, 269, 383, 446
Csp6I GTAC 1 cut(s) 592
CviAII CATG 1 cut(s) 305
CviQI GTAC 1 cut(s) 592
DdeI CTNAG 3 cut(s) 72, 128, 186
DrdI GACNNNNNNGTC 1 cut(s) 309
DseDI GACNNNNNNGTC 1 cut(s) 309
Eam1104I CTCTTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 204
Ecl136II GAGCTC 1 cut(s) 554
Eco24I GRGCYC 2 cut(s) 107, 556
Eco31I GGTCTC 1 cut(s) 317
Eco47I GGWCC 4 cut(s) 212, 269, 383, 446
Eco53kI GAGCTC 1 cut(s) 554
Eco57I CTGAAG 2 cut(s) 185, 603
Eco81I CCTNAGG 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 554
EcoRII CCWGG 2 cut(s) 265, 408
EcoT22I ATGCAT 1 cut(s) 358
EcoT38I GRGCYC 2 cut(s) 107, 556
FaeI CATG 1 cut(s) 308
FaiI YATR 4 cut(s) 306, 334, 354, 504
FalI AAGNNNNNCTT 2 cut(s) 560, 592
FaqI GGGAC 1 cut(s) 459
FatI CATG 1 cut(s) 304
FblI GTMKAC 1 cut(s) 262
Fnu4HI GCNGC 3 cut(s) 8, 38, 195
FokI GGATG 3 cut(s) 98, 474, 479
FriOI GRGCYC 2 cut(s) 107, 556
Fsp4HI GCNGC 3 cut(s) 8, 38, 195
FspBI CTAG 1 cut(s) 387
GlaI GCGC 1 cut(s) 6
GluI GCNGC 3 cut(s) 8, 38, 195
GsaI CCCAGC 2 cut(s) 14, 591
GsuI CTGGAG 1 cut(s) 532
HaeII RGCGCY 1 cut(s) 8
HapII CCGG 4 cut(s) 47, 161, 422, 437
HhaI GCGC 1 cut(s) 7
Hin1II CATG 1 cut(s) 308
Hin6I GCGC 1 cut(s) 5
HinP1I GCGC 1 cut(s) 5
HindIII AAGCTT 1 cut(s) 296
HpaII CCGG 4 cut(s) 47, 161, 422, 437
HphI GGTGA 3 cut(s) 61, 167, 577
Hpy166II GTNNAC 3 cut(s) 158, 263, 594
Hpy188I TCNGA 1 cut(s) 461
Hpy188III TCNNGA 3 cut(s) 143, 549, 601
Hpy8I GTNNAC 3 cut(s) 158, 263, 594
HpyAV CCTTC 3 cut(s) 149, 302, 376
HpyCH4V TGCA 5 cut(s) 151, 292, 356, 470, 560
HpyF10VI GCNNNNNNNGC 3 cut(s) 37, 43, 191
HpyF3I CTNAG 3 cut(s) 72, 128, 186
Hsp92II CATG 1 cut(s) 308
HspAI GCGC 1 cut(s) 5
LguI GCTCTTC 1 cut(s) 204
LmnI GCTCC 3 cut(s) 14, 110, 551
Lsp1109I GCAGC 2 cut(s) 24, 181
LweI GCATC 2 cut(s) 457, 501
MaeI CTAG 1 cut(s) 387
MaeIII GTNAC 3 cut(s) 49, 58, 488
MboII GAAGA 4 cut(s) 95, 191, 239, 533
MhlI GDGCHC 2 cut(s) 107, 556
MluCI AATT 2 cut(s) 146, 319
MmeI TCCRAC 1 cut(s) 502
MnlI CCTC 7 cut(s) 14, 118, 137, 157, 248, 263, 331
Mph1103I ATGCAT 1 cut(s) 358
MroXI GAANNNNTTC 1 cut(s) 87
MspI CCGG 4 cut(s) 47, 161, 422, 437
MspR9I CCNGG 3 cut(s) 267, 410, 423
MvaI CCWGG 2 cut(s) 267, 410
MwoI GCNNNNNNNGC 3 cut(s) 37, 43, 191
NciI CCSGG 1 cut(s) 423
NlaIII CATG 1 cut(s) 308
NlaIV GGNNCC 3 cut(s) 106, 287, 447
NmeAIII GCCGAG 1 cut(s) 532
NmuCI GTSAC 2 cut(s) 49, 58
NsiI ATGCAT 1 cut(s) 358
PciSI GCTCTTC 1 cut(s) 204
PdmI GAANNNNTTC 1 cut(s) 87
PkrI GCNGC 3 cut(s) 9, 39, 196
Psp124BI GAGCTC 1 cut(s) 556
Psp6I CCWGG 2 cut(s) 265, 408
PspFI CCCAGC 2 cut(s) 10, 587
PspGI CCWGG 2 cut(s) 265, 408
PspN4I GGNNCC 3 cut(s) 106, 287, 447
PspPI GGNCC 4 cut(s) 212, 269, 383, 446
PstI CTGCAG 1 cut(s) 294
RsaI GTAC 1 cut(s) 593
RsaNI GTAC 1 cut(s) 592
SacI GAGCTC 1 cut(s) 556
SapI GCTCTTC 1 cut(s) 204
SatI GCNGC 3 cut(s) 8, 38, 195
Sau96I GGNCC 4 cut(s) 212, 269, 383, 446
ScrFI CCNGG 3 cut(s) 267, 410, 423
SduI GDGCHC 2 cut(s) 107, 556
SfaNI GCATC 2 cut(s) 457, 501
SfcI CTRYAG 1 cut(s) 290
SinI GGWCC 4 cut(s) 212, 269, 383, 446
Sse9I AATT 2 cut(s) 146, 319
SspMI CTAG 1 cut(s) 387
SstI GAGCTC 1 cut(s) 556
StyD4I CCNGG 3 cut(s) 265, 408, 421
TaqI TCGA 1 cut(s) 81
TaqII GACCGA 1 cut(s) 463
TasI AATT 2 cut(s) 146, 319
TscAI CASTG 2 cut(s) 385, 567
TseFI GTSAC 2 cut(s) 49, 58
TseI GCWGC 3 cut(s) 7, 37, 194
Tsp45I GTSAC 2 cut(s) 49, 58
TspDTI ATGAA 1 cut(s) 321
TspRI CASTG 2 cut(s) 385, 567
VpaK11BI GGWCC 4 cut(s) 212, 269, 383, 446
XmiI GTMKAC 1 cut(s) 262
XmnI GAANNNNTTC 1 cut(s) 87
XspI CTAG 1 cut(s) 387
Zsp2I ATGCAT 1 cut(s) 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.