Rmu_sc0008929.1_g000013

Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008929.1
Physical Location & Seq
Forward (+)
51755 .. 52064
310 bp
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UTR
Exon/CDS
Intron
Rmu_sc0008929.1_g000013.1.cds

Sequence Viewer

Length: 203 bp
atggcggcgttgggagcaagaggaggtggactggtgctgccaaagccggtgacttttgtgaccggaaacgccaagaagcttgaagaagtgcgcgccatcttgggcacctccattcccttcaactctctcaagctcgatttgccagaattgcaaggggagcctgaggacatctccaaagaaaaggcgaggttggctgccgttca

Protein Analysis

67

Amino Acids

7.03

Weight (kDa)

8.1

Isoelectric Point (pI)

36.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010856)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 104
AccII CGCG 1 cut(s) 93
AciI CCGC 1 cut(s) 5
AgsI TTSAA 2 cut(s) 83, 121
AluBI AGCT 2 cut(s) 79, 133
AluI AGCT 2 cut(s) 79, 133
ApeKI GCWGC 2 cut(s) 37, 194
AspLEI GCGC 2 cut(s) 93, 95
AsuHPI GGTGA 1 cut(s) 61
AxyI CCTNAGG 1 cut(s) 162
BaeGI GKGCMC 1 cut(s) 107
BanI GGYRCC 1 cut(s) 104
BbvI GCAGC 2 cut(s) 24, 181
BccI CCATC 1 cut(s) 104
BceAI ACGGC 1 cut(s) 182
BisI GCNGC 3 cut(s) 6, 38, 195
BlsI GCNGC 3 cut(s) 7, 39, 196
BmiI GGNNCC 2 cut(s) 106, 159
BplI GAGNNNNNCTC 2 cut(s) 155, 187
BpuEI CTTGAG 1 cut(s) 113
BsaWI WCCGGW 1 cut(s) 62
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 1 cut(s) 36
Bse21I CCTNAGG 1 cut(s) 162
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 1 cut(s) 36
BsePI GCGCGC 1 cut(s) 91
BseRI GAGGAG 1 cut(s) 36
BseSI GKGCMC 1 cut(s) 107
BseXI GCAGC 2 cut(s) 24, 181
Bsh1236I CGCG 1 cut(s) 93
BshNI GGYRCC 1 cut(s) 104
BsiSI CCGG 2 cut(s) 47, 63
Bsp1286I GDGCHC 1 cut(s) 107
BspACI CCGC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 154
BspFNI CGCG 1 cut(s) 93
BspLI GGNNCC 2 cut(s) 106, 159
BspT107I GGYRCC 1 cut(s) 104
BsrFI RCCGGY 1 cut(s) 46
BsrI ACTGG 1 cut(s) 36
BssAI RCCGGY 1 cut(s) 46
BssHII GCGCGC 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 93
BstDEI CTNAG 1 cut(s) 162
BstFNI CGCG 1 cut(s) 93
BstHHI GCGC 2 cut(s) 93, 95
BstMWI GCNNNNNNNGC 6 cut(s) 14, 43, 139, 148, 157, 191
BstSLI GKGCMC 1 cut(s) 107
BstUI CGCG 1 cut(s) 93
BstV1I GCAGC 2 cut(s) 24, 181
Bsu36I CCTNAGG 1 cut(s) 162
Cac8I GCNNGC 1 cut(s) 93
CfoI GCGC 2 cut(s) 93, 95
Cfr10I RCCGGY 1 cut(s) 46
CviJI RGCY 5 cut(s) 46, 79, 133, 160, 194
CviKI_1 RGCY 5 cut(s) 46, 79, 133, 160, 194
DdeI CTNAG 1 cut(s) 162
Eco81I CCTNAGG 1 cut(s) 162
Fnu4HI GCNGC 3 cut(s) 6, 38, 195
Fsp4HI GCNGC 3 cut(s) 6, 38, 195
GlaI GCGC 2 cut(s) 92, 94
GluI GCNGC 3 cut(s) 6, 38, 195
HapII CCGG 2 cut(s) 47, 63
HhaI GCGC 2 cut(s) 93, 95
Hin6I GCGC 2 cut(s) 91, 93
HinP1I GCGC 2 cut(s) 91, 93
HindIII AAGCTT 1 cut(s) 77
HpaII CCGG 2 cut(s) 47, 63
HphI GGTGA 1 cut(s) 61
Hpy166II GTNNAC 1 cut(s) 29
Hpy8I GTNNAC 1 cut(s) 29
HpyAV CCTTC 1 cut(s) 127
HpyCH4V TGCA 1 cut(s) 151
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 43, 139, 148, 157, 191
HpyF3I CTNAG 1 cut(s) 162
HspAI GCGC 2 cut(s) 91, 93
LmnI GCTCC 2 cut(s) 14, 157
LpnPI CCDG 5 cut(s) 17, 60, 76, 156, 174
Lsp1109I GCAGC 2 cut(s) 24, 181
MaeIII GTNAC 2 cut(s) 49, 58
MboII GAAGA 1 cut(s) 95
MhlI GDGCHC 1 cut(s) 107
MluCI AATT 1 cut(s) 146
MnlI CCTC 5 cut(s) 14, 17, 118, 157, 180
MspI CCGG 2 cut(s) 47, 63
MvnI CGCG 1 cut(s) 93
MwoI GCNNNNNNNGC 6 cut(s) 14, 43, 139, 148, 157, 191
NlaIV GGNNCC 2 cut(s) 106, 159
NmuCI GTSAC 2 cut(s) 49, 58
PauI GCGCGC 1 cut(s) 91
PkrI GCNGC 3 cut(s) 7, 39, 196
PspN4I GGNNCC 2 cut(s) 106, 159
PteI GCGCGC 1 cut(s) 91
SatI GCNGC 3 cut(s) 6, 38, 195
SduI GDGCHC 1 cut(s) 107
SetI ASST 5 cut(s) 28, 81, 110, 135, 191
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
Sse9I AATT 1 cut(s) 146
SsiI CCGC 1 cut(s) 5
TaqI TCGA 1 cut(s) 135
TasI AATT 1 cut(s) 146
TauI GCSGC 1 cut(s) 8
TseFI GTSAC 2 cut(s) 49, 58
TseI GCWGC 2 cut(s) 37, 194
Tsp45I GTSAC 2 cut(s) 49, 58
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.