Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007465

Physical Location & Seq

Genomic Coordinates Forward (+)

6900841 .. 6908401

Gene Structure 7561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G091600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGATCGCGGCCATTTCTCCCCTCCATTCCGCAACCACGGTACACGCTGCCAACCCGACCCGAAAGCACCGCTCTTGCGAGGCCCTCTGCTGCAGCGGCAACCTAGGGTTTCGGTCCTCTGAGCGTAGGCGGTGGGTAAACCCGACCCGGATGGAGTTGCTGAACCGAATTATAGGCGGCGGAGGCTGCTTCAGGGACCCTAGCCGCCGGGAGATTAAGGTGGAGATCGACAGCGGCGGCGAGGATGTCTTCGCCGCCCACCCCAAGGGCAGCGCTGTGCCTGAACATCTTGTCATTATGGTCAATGGAATCATCGGCAGCGCTTCAGACTGGAGATATGCTGCAGAACAGTTTGTGAACAAGCTTCCTGATAAAGTAATTGTGCACCGCAGTGAATGTAACTCTTCAATGATGACATTTGATGGTGTTGACATGATGGGTGAAAGGCTAGCCGAAGAGGTATTAGCTGTTGTCAGAAATAGGTCTGAGGTGCGGAAAATATCATTTGTGGCTCACTCTTTAGGAGGGTTGGTTGCAAGGTATGCCATCGGGAGGCTTTACGAACGTTGTCCAAAATCTGAACCCTCAGGTCATAATGGTAATTGCTTAATTGAAGGGCATACAAATAATTTGACACAATCCCTTGACAAGCCTCACCACGGTACAATTGCTGGACTGGAACCAATGAACTTTATAACGTTCGCAACACCACATCTTGGTTCAAGGGGAAATAAACAGCTCCCATTTCTCTGTGGTCTTCCTTTTCTTGAGAGAAGAGCTTCTCAAACTGCGCACTTTATTGTTGGGAGATCCGGGAAGCATCTCTTCCTAACAGATGATGATGATGGCAGACCTCCTCTTCTTCTTCGAATGGTTAATGACTCTGATGACCTAAAATTCATATCAGCATTACGTGCATTTAAGCGCCGTGTGGCATATGCTAATGCAAATTACGATCATATGGTTGGGTGGAGAACATCTTCAATCCGGCGTCAAGATGAACTTCCGAAGTCCAATCTCCTTGGAACCAATGAGAGATATCCGCATATTGTATATGTCAAGCAAGAAACTTTTGATGATGTTCATATGAAAGCCTCTTCATGTGCTCAAGACCAAAAAATAGACTTGGAAGAGGAGATGATTAGAGGCCTTACTCAGATACCTTGGGAACGTGTGGATGTCAGCTTTCAAAAAAGTCGACAACGTTATATTGCTCATAATACCATTCAGGTGAAGAGTTACTGGTTGAATTCTGATGGTGCAGATGTGGTTTTCCATATGATAGATTACTTCCTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF676

Protein Analysis

434

Amino Acids

48.8

Weight (kDa)

8.66

Isoelectric Point (pI)

48.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007465)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25770 AT4G25770
fragaria_vesca	FvH4_4g08890 FvH4_4g08890 FvH4_4g08890 FvH4_4g08890 FvH4_4g08890 FvH4_4g08890
malus_domestica	MD13G1265600.v1.1 MD16G1266100.v1.1
prunus_persica	Prupe.1G091600_v2.0.a1 Prupe.1G091600_v2.0.a1
pyrus_communis	pycom13g23560 pycom16g23520
rosa_chinensis	RchiOBHm_Chr4g0403551
rosa_laevigata	RLG00000008969
rosa_multiflora	Rmu_sc0007038.1_g000018
rosa_roxburghii	Rroxscaffold_5G00348200
rosa_rugosa	Rorug04G0044100 Rorug04G0044200
rosa_samantha	Rh4AG119400 Rh4BG112400 Rh4CG127400 Rh4DG112100
rosa_wichuraiana	Rw4G009690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	695
Acc16I	TGCGCA	1 cut(s)	792
AccB7I	CCANNNNNTGG	1 cut(s)	716
AccBSI	CCGCTC	1 cut(s)	72
AccI	GTMKAC	1 cut(s)	1198
AccII	CGCG	1 cut(s)	8
AclI	AACGTT	3 cut(s)	565, 698, 1204
AclWI	GGATC	1 cut(s)	804
AcoI	YGGCCR	1 cut(s)	9
AcsI	RAATTY	2 cut(s)	896, 1249
AcuI	CTGAAG	2 cut(s)	175, 309
AcyI	GRCGYC	1 cut(s)	991
AfaI	GTAC	2 cut(s)	42, 664
AfeI	AGCGCT	2 cut(s)	274, 322
AfiI	CCNNNNNNNGG	4 cut(s)	265, 552, 659, 716
AflIII	ACRYGT	1 cut(s)	1171
AgsI	TTSAA	6 cut(s)	408, 614, 723, 984, 1190, 1249
AleI	CACNNNNGTG	1 cut(s)	390
AluBI	AGCT	5 cut(s)	364, 467, 739, 779, 1185
AluI	AGCT	5 cut(s)	364, 467, 739, 779, 1185
Alw21I	GWGCWC	2 cut(s)	387, 1108
Alw44I	GTGCAC	1 cut(s)	383
AlwI	GGATC	1 cut(s)	804
Aor51HI	AGCGCT	2 cut(s)	274, 322
AoxI	GGCC	3 cut(s)	9, 81, 1147
ApaLI	GTGCAC	1 cut(s)	383
ApeKI	GCWGC	7 cut(s)	47, 90, 93, 186, 270, 318, 341
ApoI	RAATTY	2 cut(s)	896, 1249
Asp700I	GAANNNNTTC	2 cut(s)	778, 979
AspA2I	CCTAGG	1 cut(s)	103
AspLEI	GCGC	4 cut(s)	275, 323, 793, 927
AspS9I	GGNCC	3 cut(s)	82, 114, 196
AsuC2I	CCSGG	3 cut(s)	148, 209, 814
AsuHPI	GGTGA	3 cut(s)	452, 647, 1243
AsuII	TTCGAA	1 cut(s)	868
AsuNHI	GCTAGC	1 cut(s)	448
AvaII	GGWCC	2 cut(s)	114, 196
AvrII	CCTAGG	1 cut(s)	103
AxyI	CCTNAGG	1 cut(s)	586
BaeGI	GKGCMC	1 cut(s)	387
BbsI	GAAGAC	2 cut(s)	241, 749
Bbv12I	GWGCWC	2 cut(s)	387, 1108
BbvI	GCAGC	7 cut(s)	34, 77, 105, 173, 282, 328, 330
BccI	CCATC	6 cut(s)	145, 416, 430, 554, 839, 1250
BceAI	ACGGC	1 cut(s)	912
BcnI	CCSGG	3 cut(s)	148, 209, 814
BfaI	CTAG	3 cut(s)	104, 201, 449
BfmI	CTRYAG	2 cut(s)	91, 342
BfoI	RGCGCY	3 cut(s)	276, 324, 928
BlnI	CCTAGG	1 cut(s)	103
Bme1390I	CCNGG	3 cut(s)	148, 209, 814
Bme18I	GGWCC	2 cut(s)	114, 196
BmgT120I	GGNCC	3 cut(s)	82, 114, 196
BmiI	GGNNCC	4 cut(s)	197, 198, 681, 1027
BmrFI	CCNGG	3 cut(s)	148, 209, 814
BmsI	GCATC	1 cut(s)	829
BmtI	GCTAGC	1 cut(s)	452
BpiI	GAAGAC	2 cut(s)	241, 749
BpmI	CTGGAG	1 cut(s)	352
Bpu14I	TTCGAA	1 cut(s)	868
BpuEI	CTTGAG	2 cut(s)	788, 1092
BpuMI	CCSGG	3 cut(s)	148, 209, 814
BsaAI	YACGTR	1 cut(s)	914
BsaHI	GRCGYC	1 cut(s)	991
BsaJI	CCNNGG	6 cut(s)	36, 103, 264, 658, 1021, 1163
BsaXI	ACNNNNNCTCC	2 cut(s)	516, 546
Bsc4I	CCNNNNNNNGG	4 cut(s)	265, 552, 659, 716
Bse1I	ACTGG	3 cut(s)	335, 681, 1247
Bse21I	CCTNAGG	1 cut(s)	586
BseDI	CCNNGG	6 cut(s)	36, 103, 264, 658, 1021, 1163
BseGI	GGATG	3 cut(s)	156, 250, 1183
BseLI	CCNNNNNNNGG	4 cut(s)	265, 552, 659, 716
BseMII	CTCAG	4 cut(s)	111, 477, 600, 1169
BseNI	ACTGG	3 cut(s)	335, 681, 1247
BseRI	GAGGAG	2 cut(s)	846, 1148
BseSI	GKGCMC	1 cut(s)	387
BseXI	GCAGC	7 cut(s)	34, 77, 105, 173, 282, 328, 330
BsgI	GTGCAG	1 cut(s)	1281
Bsh1236I	CGCG	1 cut(s)	8
BshFI	GGCC	3 cut(s)	11, 83, 1149
BsiHKAI	GWGCWC	2 cut(s)	387, 1108
BsiSI	CCGG	4 cut(s)	148, 208, 813, 988
BslFI	GGGAC	1 cut(s)	209
BslI	CCNNNNNNNGG	4 cut(s)	265, 552, 659, 716
BsmFI	GGGAC	1 cut(s)	209
BsnI	GGCC	3 cut(s)	11, 83, 1149
Bsp119I	TTCGAA	1 cut(s)	868
Bsp1286I	GDGCHC	2 cut(s)	387, 1108
Bsp143I	GATC	4 cut(s)	3, 225, 809, 955
BspANI	GGCC	3 cut(s)	11, 83, 1149
BspCNI	CTCAG	4 cut(s)	112, 478, 599, 1168
BspFNI	CGCG	1 cut(s)	8
BspLI	GGNNCC	4 cut(s)	197, 198, 681, 1027
BspMAI	CTGCAG	2 cut(s)	95, 346
BspOI	GCTAGC	1 cut(s)	452
BspPI	GGATC	1 cut(s)	804
BspQI	GCTCTTC	1 cut(s)	769
BspT104I	TTCGAA	1 cut(s)	868
BsrBI	CCGCTC	1 cut(s)	72
BsrI	ACTGG	3 cut(s)	335, 681, 1247
BssECI	CCNNGG	6 cut(s)	36, 103, 264, 658, 1021, 1163
BssMI	GATC	4 cut(s)	3, 225, 809, 955
BssNI	GRCGYC	1 cut(s)	991
BssT1I	CCWWGG	4 cut(s)	103, 264, 1021, 1163
Bst4CI	ACNGT	3 cut(s)	40, 351, 662
Bst6I	CTCTTC	8 cut(s)	409, 450, 769, 830, 864, 1102, 1125, 1229
BstACI	GRCGYC	1 cut(s)	991
BstAPI	GCANNNNNTGC	2 cut(s)	542, 914
BstBAI	YACGTR	1 cut(s)	914
BstBI	TTCGAA	1 cut(s)	868
BstC8I	GCNNGC	1 cut(s)	450
BstDEI	CTNAG	4 cut(s)	120, 486, 586, 1155
BstDSI	CCRYGG	2 cut(s)	36, 658
BstF5I	GGATG	3 cut(s)	156, 250, 1183
BstFNI	CGCG	1 cut(s)	8
BstH2I	RGCGCY	3 cut(s)	276, 324, 928
BstHHI	GCGC	4 cut(s)	275, 323, 793, 927
BstKTI	GATC	4 cut(s)	6, 228, 812, 958
BstMBI	GATC	4 cut(s)	3, 225, 809, 955
BstMWI	GCNNNNNNNGC	5 cut(s)	96, 183, 186, 542, 914
BstSCI	CCNGG	3 cut(s)	146, 207, 812
BstSFI	CTRYAG	2 cut(s)	91, 342
BstSLI	GKGCMC	1 cut(s)	387
BstUI	CGCG	1 cut(s)	8
BstV1I	GCAGC	7 cut(s)	34, 77, 105, 173, 282, 328, 330
BstV2I	GAAGAC	2 cut(s)	241, 749
BstX2I	RGATCY	1 cut(s)	809
BstYI	RGATCY	1 cut(s)	809
Bsu36I	CCTNAGG	1 cut(s)	586
BsuRI	GGCC	3 cut(s)	11, 83, 1149
BtgI	CCRYGG	2 cut(s)	36, 658
BtsCI	GGATG	3 cut(s)	156, 250, 1183
BtsI	GCAGTG	1 cut(s)	397
BtsIMutI	CAGTG	1 cut(s)	397
Cac8I	GCNNGC	1 cut(s)	450
CfoI	GCGC	4 cut(s)	275, 323, 793, 927
Cfr13I	GGNCC	3 cut(s)	82, 114, 196
CseI	GACGC	1 cut(s)	980
Csp6I	GTAC	2 cut(s)	41, 663
CviAII	CATG	2 cut(s)	433, 1101
CviQI	GTAC	2 cut(s)	41, 663
DdeI	CTNAG	4 cut(s)	120, 486, 586, 1155
DpnI	GATC	4 cut(s)	5, 227, 811, 957
DpnII	GATC	4 cut(s)	3, 225, 809, 955
EaeI	YGGCCR	1 cut(s)	9
Eam1104I	CTCTTC	8 cut(s)	409, 450, 769, 830, 864, 1102, 1125, 1229
EarI	CTCTTC	8 cut(s)	409, 450, 769, 830, 864, 1102, 1125, 1229
EciI	GGCGGA	1 cut(s)	195
Eco130I	CCWWGG	4 cut(s)	103, 264, 1021, 1163
Eco147I	AGGCCT	1 cut(s)	1149
Eco32I	GATATC	1 cut(s)	1040
Eco47I	GGWCC	2 cut(s)	114, 196
Eco47III	AGCGCT	2 cut(s)	274, 322
Eco57I	CTGAAG	2 cut(s)	175, 309
Eco81I	CCTNAGG	1 cut(s)	586
EcoO109I	RGGNCCY	2 cut(s)	82, 196
EcoRI	GAATTC	1 cut(s)	1249
EcoRV	GATATC	1 cut(s)	1040
EcoT14I	CCWWGG	4 cut(s)	103, 264, 1021, 1163
ErhI	CCWWGG	4 cut(s)	103, 264, 1021, 1163
FaeI	CATG	2 cut(s)	436, 1104
FalI	AAGNNNNNCTT	4 cut(s)	809, 841, 987, 1019
FaqI	GGGAC	1 cut(s)	209
FatI	CATG	2 cut(s)	432, 1100
FauNDI	CATATG	4 cut(s)	937, 960, 1086, 1278
FblI	GTMKAC	1 cut(s)	1198
FokI	GGATG	3 cut(s)	163, 257, 1190
FspBI	CTAG	3 cut(s)	104, 201, 449
FspI	TGCGCA	1 cut(s)	792
GlaI	GCGC	4 cut(s)	274, 322, 792, 926
GsuI	CTGGAG	1 cut(s)	352
HaeII	RGCGCY	3 cut(s)	276, 324, 928
HaeIII	GGCC	3 cut(s)	11, 83, 1149
HapII	CCGG	4 cut(s)	148, 208, 813, 988
HgaI	GACGC	1 cut(s)	980
HhaI	GCGC	4 cut(s)	275, 323, 793, 927
Hin1I	GRCGYC	1 cut(s)	991
Hin1II	CATG	2 cut(s)	436, 1104
Hin6I	GCGC	4 cut(s)	273, 321, 791, 925
HinP1I	GCGC	4 cut(s)	273, 321, 791, 925
HincII	GTYRAC	2 cut(s)	430, 1199
HindII	GTYRAC	2 cut(s)	430, 1199
HindIII	AAGCTT	1 cut(s)	362
HinfI	GANTC	2 cut(s)	309, 881
HpaII	CCGG	4 cut(s)	148, 208, 813, 988
HphI	GGTGA	3 cut(s)	452, 647, 1243
Hpy166II	GTNNAC	6 cut(s)	43, 139, 358, 385, 430, 1199
Hpy188I	TCNGA	9 cut(s)	121, 328, 476, 487, 580, 886, 1008, 1158, 1255
Hpy188III	TCNNGA	5 cut(s)	368, 550, 767, 995, 1109
Hpy8I	GTNNAC	6 cut(s)	43, 139, 358, 385, 430, 1199
HpyAV	CCTTC	1 cut(s)	608
HpyCH4III	ACNGT	3 cut(s)	40, 351, 662
HpyCH4IV	ACGT	5 cut(s)	565, 698, 913, 1171, 1204
HpyCH4V	TGCA	7 cut(s)	93, 344, 385, 536, 917, 947, 1262
HpyF10VI	GCNNNNNNNGC	5 cut(s)	96, 183, 186, 542, 914
HpyF3I	CTNAG	4 cut(s)	120, 486, 586, 1155
HpySE526I	ACGT	5 cut(s)	565, 698, 913, 1171, 1204
Hsp92I	GRCGYC	1 cut(s)	991
Hsp92II	CATG	2 cut(s)	436, 1104
HspAI	GCGC	4 cut(s)	273, 321, 791, 925
KflI	GGGWCCC	1 cut(s)	196
Kzo9I	GATC	4 cut(s)	3, 225, 809, 955
LguI	GCTCTTC	1 cut(s)	769
LmnI	GCTCC	1 cut(s)	744
Lsp1109I	GCAGC	7 cut(s)	34, 77, 105, 173, 282, 328, 330
LweI	GCATC	1 cut(s)	829
MaeI	CTAG	3 cut(s)	104, 201, 449
MaeII	ACGT	5 cut(s)	565, 698, 913, 1171, 1204
MaeIII	GTNAC	2 cut(s)	398, 1238
MalI	GATC	4 cut(s)	5, 227, 811, 957
MbiI	CCGCTC	1 cut(s)	72
MboI	GATC	4 cut(s)	3, 225, 809, 955
MfeI	CAATTG	1 cut(s)	666
MflI	RGATCY	1 cut(s)	809
MhlI	GDGCHC	2 cut(s)	387, 1108
MluCI	AATT	9 cut(s)	168, 378, 601, 609, 628, 666, 896, 949, 1249
MlyI	GAGTC	1 cut(s)	875
MroXI	GAANNNNTTC	2 cut(s)	778, 979
MseI	TTAA	4 cut(s)	216, 608, 876, 921
MslI	CAYNNNNRTG	2 cut(s)	390, 1229
MspA1I	CMGCKG	2 cut(s)	96, 234
MspI	CCGG	4 cut(s)	148, 208, 813, 988
MspR9I	CCNGG	3 cut(s)	148, 209, 814
MunI	CAATTG	1 cut(s)	666
MvnI	CGCG	1 cut(s)	8
MwoI	GCNNNNNNNGC	5 cut(s)	96, 183, 186, 542, 914
NciI	CCSGG	3 cut(s)	148, 209, 814
NdeI	CATATG	4 cut(s)	937, 960, 1086, 1278
NdeII	GATC	4 cut(s)	3, 225, 809, 955
NheI	GCTAGC	1 cut(s)	448
NlaIII	CATG	2 cut(s)	436, 1104
NlaIV	GGNNCC	4 cut(s)	197, 198, 681, 1027
NsbI	TGCGCA	1 cut(s)	792
NspV	TTCGAA	1 cut(s)	868
OliI	CACNNNNGTG	1 cut(s)	390
PceI	AGGCCT	1 cut(s)	1149
PciSI	GCTCTTC	1 cut(s)	769
PdmI	GAANNNNTTC	2 cut(s)	778, 979
PfeI	GAWTC	1 cut(s)	309
PflMI	CCANNNNNTGG	1 cut(s)	716
PfoI	TCCNGGA	1 cut(s)	812
PleI	GAGTC	1 cut(s)	875
PpsI	GAGTC	1 cut(s)	875
Ppu21I	YACGTR	1 cut(s)	914
PpuMI	RGGWCCY	1 cut(s)	196
PsiI	TTATAA	1 cut(s)	695
Psp1406I	AACGTT	3 cut(s)	565, 698, 1204
Psp5II	RGGWCCY	1 cut(s)	196
PspN4I	GGNNCC	4 cut(s)	197, 198, 681, 1027
PspPI	GGNCC	3 cut(s)	82, 114, 196
PspPPI	RGGWCCY	1 cut(s)	196
PstI	CTGCAG	2 cut(s)	95, 346
PsuI	RGATCY	1 cut(s)	809
RsaI	GTAC	2 cut(s)	42, 664
RsaNI	GTAC	2 cut(s)	41, 663
RseI	CAYNNNNRTG	2 cut(s)	390, 1229
SalI	GTCGAC	1 cut(s)	1197
SapI	GCTCTTC	1 cut(s)	769
SaqAI	TTAA	4 cut(s)	216, 608, 876, 921
Sau3AI	GATC	4 cut(s)	3, 225, 809, 955
Sau96I	GGNCC	3 cut(s)	82, 114, 196
SchI	GAGTC	1 cut(s)	875
ScrFI	CCNGG	3 cut(s)	148, 209, 814
SduI	GDGCHC	2 cut(s)	387, 1108
SfaNI	GCATC	1 cut(s)	829
SfcI	CTRYAG	2 cut(s)	91, 342
SfuI	TTCGAA	1 cut(s)	868
SinI	GGWCC	2 cut(s)	114, 196
SmiMI	CAYNNNNRTG	2 cut(s)	390, 1229
SmlI	CTYRAG	2 cut(s)	767, 1107
SmoI	CTYRAG	2 cut(s)	767, 1107
Sse9I	AATT	9 cut(s)	168, 378, 601, 609, 628, 666, 896, 949, 1249
SseBI	AGGCCT	1 cut(s)	1149
SspMI	CTAG	3 cut(s)	104, 201, 449
StuI	AGGCCT	1 cut(s)	1149
StyD4I	CCNGG	3 cut(s)	146, 207, 812
StyI	CCWWGG	4 cut(s)	103, 264, 1021, 1163
TaaI	ACNGT	3 cut(s)	40, 351, 662
TaiI	ACGT	5 cut(s)	568, 701, 916, 1174, 1207
TaqI	TCGA	3 cut(s)	228, 868, 1198
TaqII	GACCGA	1 cut(s)	102
TasI	AATT	9 cut(s)	168, 378, 601, 609, 628, 666, 896, 949, 1249
TauI	GCSGC	7 cut(s)	11, 99, 180, 207, 237, 240, 257
TfiI	GAWTC	1 cut(s)	309
Tru1I	TTAA	4 cut(s)	216, 608, 876, 921
Tru9I	TTAA	4 cut(s)	216, 608, 876, 921
TscAI	CASTG	1 cut(s)	397
TseI	GCWGC	7 cut(s)	47, 90, 93, 186, 270, 318, 341
TspDTI	ATGAA	6 cut(s)	701, 889, 1014, 1073, 1089, 1103
TspRI	CASTG	1 cut(s)	397
Van91I	CCANNNNNTGG	1 cut(s)	716
VneI	GTGCAC	1 cut(s)	383
VpaK11BI	GGWCC	2 cut(s)	114, 196
XapI	RAATTY	2 cut(s)	896, 1249
XmaJI	CCTAGG	1 cut(s)	103
XmiI	GTMKAC	1 cut(s)	1198
XmnI	GAANNNNTTC	2 cut(s)	778, 979
XspI	CTAG	3 cut(s)	104, 201, 449

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.