Haemolysin-III related
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G24150 AT2G24150 AT4G30850 AT4G30850 |
| fragaria_vesca | FvH4_4g08550 FvH4_4g08550 FvH4_4g08550 FvH4_6g47370 FvH4_6g47370 FvH4_6g47370 FvH4_6g47370 FvH4_6g47370 |
| malus_domestica | MD15G1444500.v1.1 |
| prunus_persica | Prupe.1G101700_v2.0.a1 Prupe.1G101700_v2.0.a1 |
| pyrus_communis | pycom08g21610 |
| rosa_chinensis | RchiOBHm_Chr4g0405431 |
| rosa_laevigata | RLG00000008843 |
| rosa_multiflora | Rmu_co8267361.1_g000001 Rmu_sc0000575.1_g000016 Rmu_sc0029762.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00349890 |
| rosa_rugosa | Rorug04G0060100 |
| rosa_samantha | Rh4AG131800 Rh4BG126700 Rh4CG139200 Rh4DG125800 |
| rosa_wichuraiana | Rw4G010670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 180 |
| AccB1I | GGYRCC | 1 cut(s) | 600 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1085 |
| AccIII | TCCGGA | 1 cut(s) | 412 |
| AciI | CCGC | 1 cut(s) | 113 |
| AclWI | GGATC | 1 cut(s) | 1081 |
| AcoI | YGGCCR | 1 cut(s) | 164 |
| AcsI | RAATTY | 2 cut(s) | 432, 968 |
| AcuI | CTGAAG | 2 cut(s) | 169, 900 |
| AcyI | GRCGYC | 2 cut(s) | 177, 601 |
| AfaI | GTAC | 2 cut(s) | 119, 399 |
| AfeI | AGCGCT | 1 cut(s) | 1039 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 774, 1085 |
| AflII | CTTAAG | 1 cut(s) | 514 |
| AgsI | TTSAA | 3 cut(s) | 172, 586, 708 |
| AjnI | CCWGG | 3 cut(s) | 102, 197, 961 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 119, 151 |
| AluBI | AGCT | 4 cut(s) | 273, 292, 892, 923 |
| AluI | AGCT | 4 cut(s) | 273, 292, 892, 923 |
| Alw21I | GWGCWC | 1 cut(s) | 294 |
| Alw26I | GTCTC | 2 cut(s) | 26, 761 |
| AlwI | GGATC | 1 cut(s) | 1081 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 923 |
| Aor13HI | TCCGGA | 1 cut(s) | 412 |
| Aor51HI | AGCGCT | 1 cut(s) | 1039 |
| AoxI | GGCC | 2 cut(s) | 164, 497 |
| ApeKI | GCWGC | 2 cut(s) | 923, 1040 |
| ApoI | RAATTY | 2 cut(s) | 432, 968 |
| AspLEI | GCGC | 4 cut(s) | 603, 880, 1025, 1040 |
| AspS9I | GGNCC | 3 cut(s) | 106, 335, 370 |
| AsuC2I | CCSGG | 3 cut(s) | 616, 817, 1070 |
| AsuHPI | GGTGA | 4 cut(s) | 76, 277, 832, 1068 |
| AvaII | GGWCC | 3 cut(s) | 106, 335, 370 |
| BaeGI | GKGCMC | 1 cut(s) | 987 |
| BalI | TGGCCA | 1 cut(s) | 166 |
| BanI | GGYRCC | 1 cut(s) | 600 |
| BanII | GRGCYC | 1 cut(s) | 294 |
| BbsI | GAAGAC | 3 cut(s) | 44, 50, 175 |
| Bbv12I | GWGCWC | 1 cut(s) | 294 |
| BbvI | GCAGC | 2 cut(s) | 910, 1027 |
| BccI | CCATC | 3 cut(s) | 489, 740, 999 |
| BciT130I | CCWGG | 3 cut(s) | 104, 199, 963 |
| BciVI | GTATCC | 1 cut(s) | 936 |
| BcnI | CCSGG | 3 cut(s) | 616, 817, 1070 |
| BcoDI | GTCTC | 2 cut(s) | 26, 761 |
| BfaI | CTAG | 3 cut(s) | 605, 753, 842 |
| BfoI | RGCGCY | 2 cut(s) | 604, 1041 |
| BfrI | CTTAAG | 1 cut(s) | 514 |
| BfuI | GTATCC | 1 cut(s) | 936 |
| BglII | AGATCT | 1 cut(s) | 996 |
| BisI | GCNGC | 2 cut(s) | 924, 1041 |
| BlsI | GCNGC | 2 cut(s) | 925, 1042 |
| Bme1390I | CCNGG | 6 cut(s) | 104, 199, 616, 817, 963, 1070 |
| Bme18I | GGWCC | 3 cut(s) | 106, 335, 370 |
| BmgT120I | GGNCC | 3 cut(s) | 106, 335, 370 |
| BmiI | GGNNCC | 1 cut(s) | 602 |
| BmrFI | CCNGG | 6 cut(s) | 104, 199, 616, 817, 963, 1070 |
| BmrI | ACTGGG | 1 cut(s) | 862 |
| BmsI | GCATC | 2 cut(s) | 452, 472 |
| BmuI | ACTGGG | 1 cut(s) | 862 |
| BpiI | GAAGAC | 3 cut(s) | 44, 50, 175 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 288, 320 |
| BpuEI | CTTGAG | 1 cut(s) | 295 |
| BpuMI | CCSGG | 3 cut(s) | 616, 817, 1070 |
| BsaHI | GRCGYC | 2 cut(s) | 177, 601 |
| BsaJI | CCNNGG | 6 cut(s) | 10, 500, 804, 816, 1018, 1069 |
| BsaWI | WCCGGW | 3 cut(s) | 412, 774, 826 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 774, 1085 |
| Bse1I | ACTGG | 3 cut(s) | 444, 857, 1053 |
| BseAI | TCCGGA | 1 cut(s) | 412 |
| BseBI | CCWGG | 3 cut(s) | 104, 199, 963 |
| BseDI | CCNNGG | 6 cut(s) | 10, 500, 804, 816, 1018, 1069 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 774, 1085 |
| BseMII | CTCAG | 1 cut(s) | 404 |
| BseNI | ACTGG | 3 cut(s) | 444, 857, 1053 |
| BseRI | GAGGAG | 3 cut(s) | 38, 373, 399 |
| BseSI | GKGCMC | 1 cut(s) | 987 |
| BseXI | GCAGC | 2 cut(s) | 910, 1027 |
| BseYI | CCCAGC | 1 cut(s) | 880 |
| BsgI | GTGCAG | 1 cut(s) | 747 |
| BshFI | GGCC | 2 cut(s) | 166, 499 |
| BshNI | GGYRCC | 1 cut(s) | 600 |
| BsiHKAI | GWGCWC | 1 cut(s) | 294 |
| BsiSI | CCGG | 6 cut(s) | 413, 615, 775, 816, 827, 1069 |
| BslFI | GGGAC | 2 cut(s) | 270, 293 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 774, 1085 |
| BsmAI | GTCTC | 2 cut(s) | 26, 761 |
| BsmBI | CGTCTC | 1 cut(s) | 26 |
| BsmFI | GGGAC | 2 cut(s) | 270, 293 |
| BsmI | GAATGC | 1 cut(s) | 926 |
| BsnI | GGCC | 2 cut(s) | 166, 499 |
| Bsp1286I | GDGCHC | 2 cut(s) | 294, 987 |
| Bsp13I | TCCGGA | 1 cut(s) | 412 |
| Bsp1407I | TGTACA | 1 cut(s) | 397 |
| Bsp143I | GATC | 3 cut(s) | 973, 996, 1073 |
| Bsp19I | CCATGG | 1 cut(s) | 804 |
| BspACI | CCGC | 1 cut(s) | 113 |
| BspANI | GGCC | 2 cut(s) | 166, 499 |
| BspCNI | CTCAG | 1 cut(s) | 403 |
| BspEI | TCCGGA | 1 cut(s) | 412 |
| BspLI | GGNNCC | 1 cut(s) | 602 |
| BspPI | GGATC | 1 cut(s) | 1081 |
| BspT107I | GGYRCC | 1 cut(s) | 600 |
| BspTI | CTTAAG | 1 cut(s) | 514 |
| BsrGI | TGTACA | 1 cut(s) | 397 |
| BsrI | ACTGG | 3 cut(s) | 444, 857, 1053 |
| BssECI | CCNNGG | 6 cut(s) | 10, 500, 804, 816, 1018, 1069 |
| BssMI | GATC | 3 cut(s) | 973, 996, 1073 |
| BssNI | GRCGYC | 2 cut(s) | 177, 601 |
| BssT1I | CCWWGG | 2 cut(s) | 500, 804 |
| Bst2UI | CCWGG | 3 cut(s) | 104, 199, 963 |
| Bst4CI | ACNGT | 3 cut(s) | 265, 339, 355 |
| Bst6I | CTCTTC | 2 cut(s) | 62, 197 |
| BstACI | GRCGYC | 2 cut(s) | 177, 601 |
| BstAFI | CTTAAG | 1 cut(s) | 514 |
| BstAUI | TGTACA | 1 cut(s) | 397 |
| BstC8I | GCNNGC | 1 cut(s) | 894 |
| BstDEI | CTNAG | 2 cut(s) | 390, 535 |
| BstDSI | CCRYGG | 2 cut(s) | 10, 804 |
| BstH2I | RGCGCY | 2 cut(s) | 604, 1041 |
| BstHHI | GCGC | 4 cut(s) | 603, 880, 1025, 1040 |
| BstKTI | GATC | 3 cut(s) | 976, 999, 1076 |
| BstMAI | GTCTC | 2 cut(s) | 26, 761 |
| BstMBI | GATC | 3 cut(s) | 973, 996, 1073 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 540, 672, 920, 1037 |
| BstNI | CCWGG | 3 cut(s) | 104, 199, 963 |
| BstSCI | CCNGG | 6 cut(s) | 102, 197, 614, 815, 961, 1068 |
| BstSLI | GKGCMC | 1 cut(s) | 987 |
| BstV1I | GCAGC | 2 cut(s) | 910, 1027 |
| BstV2I | GAAGAC | 3 cut(s) | 44, 50, 175 |
| BstX2I | RGATCY | 1 cut(s) | 996 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 954 |
| BstYI | RGATCY | 1 cut(s) | 996 |
| BsuI | GTATCC | 1 cut(s) | 936 |
| BsuRI | GGCC | 2 cut(s) | 166, 499 |
| BtgI | CCRYGG | 2 cut(s) | 10, 804 |
| BtsIMutI | CAGTG | 3 cut(s) | 437, 850, 1046 |
| Cac8I | GCNNGC | 1 cut(s) | 894 |
| CaiI | CAGNNNCTG | 1 cut(s) | 923 |
| CfoI | GCGC | 4 cut(s) | 603, 880, 1025, 1040 |
| Cfr13I | GGNCC | 3 cut(s) | 106, 335, 370 |
| CseI | GACGC | 1 cut(s) | 235 |
| Csp6I | GTAC | 2 cut(s) | 118, 398 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1033, 1068 |
| CviAII | CATG | 5 cut(s) | 121, 458, 805, 836, 1004 |
| CviQI | GTAC | 2 cut(s) | 118, 398 |
| DdeI | CTNAG | 2 cut(s) | 390, 535 |
| DinI | GGCGCC | 1 cut(s) | 602 |
| DpnI | GATC | 3 cut(s) | 975, 998, 1075 |
| DpnII | GATC | 3 cut(s) | 973, 996, 1073 |
| EaeI | YGGCCR | 1 cut(s) | 164 |
| Eam1104I | CTCTTC | 2 cut(s) | 62, 197 |
| EarI | CTCTTC | 2 cut(s) | 62, 197 |
| Ecl136II | GAGCTC | 1 cut(s) | 292 |
| Eco130I | CCWWGG | 2 cut(s) | 500, 804 |
| Eco24I | GRGCYC | 1 cut(s) | 294 |
| Eco47I | GGWCC | 3 cut(s) | 106, 335, 370 |
| Eco47III | AGCGCT | 1 cut(s) | 1039 |
| Eco53kI | GAGCTC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 2 cut(s) | 169, 900 |
| EcoICRI | GAGCTC | 1 cut(s) | 292 |
| EcoO109I | RGGNCCY | 1 cut(s) | 106 |
| EcoRII | CCWGG | 3 cut(s) | 102, 197, 961 |
| EcoT14I | CCWWGG | 2 cut(s) | 500, 804 |
| EcoT38I | GRGCYC | 1 cut(s) | 294 |
| EgeI | GGCGCC | 1 cut(s) | 602 |
| EheI | GGCGCC | 1 cut(s) | 602 |
| ErhI | CCWWGG | 2 cut(s) | 500, 804 |
| Esp3I | CGTCTC | 1 cut(s) | 26 |
| FaeI | CATG | 5 cut(s) | 124, 461, 808, 839, 1007 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 484, 516 |
| FaqI | GGGAC | 2 cut(s) | 270, 293 |
| FatI | CATG | 5 cut(s) | 120, 457, 804, 835, 1003 |
| Fnu4HI | GCNGC | 2 cut(s) | 924, 1041 |
| FriOI | GRGCYC | 1 cut(s) | 294 |
| Fsp4HI | GCNGC | 2 cut(s) | 924, 1041 |
| FspBI | CTAG | 3 cut(s) | 605, 753, 842 |
| GlaI | GCGC | 4 cut(s) | 602, 879, 1024, 1039 |
| GluI | GCNGC | 2 cut(s) | 924, 1041 |
| GsaI | CCCAGC | 1 cut(s) | 884 |
| HaeII | RGCGCY | 2 cut(s) | 604, 1041 |
| HaeIII | GGCC | 2 cut(s) | 166, 499 |
| HapII | CCGG | 6 cut(s) | 413, 615, 775, 816, 827, 1069 |
| HgaI | GACGC | 1 cut(s) | 235 |
| HhaI | GCGC | 4 cut(s) | 603, 880, 1025, 1040 |
| Hin1I | GRCGYC | 2 cut(s) | 177, 601 |
| Hin1II | CATG | 5 cut(s) | 124, 461, 808, 839, 1007 |
| Hin6I | GCGC | 4 cut(s) | 601, 878, 1023, 1038 |
| HinP1I | GCGC | 4 cut(s) | 601, 878, 1023, 1038 |
| HinfI | GANTC | 4 cut(s) | 26, 416, 723, 823 |
| HpaII | CCGG | 6 cut(s) | 413, 615, 775, 816, 827, 1069 |
| HphI | GGTGA | 4 cut(s) | 76, 277, 832, 1068 |
| Hpy188I | TCNGA | 5 cut(s) | 31, 296, 393, 942, 996 |
| Hpy188III | TCNNGA | 5 cut(s) | 223, 244, 333, 413, 918 |
| Hpy99I | CGWCG | 3 cut(s) | 52, 179, 182 |
| HpyAV | CCTTC | 5 cut(s) | 55, 118, 119, 652, 752 |
| HpyCH4III | ACNGT | 3 cut(s) | 265, 339, 355 |
| HpyCH4IV | ACGT | 3 cut(s) | 89, 177, 933 |
| HpyCH4V | TGCA | 9 cut(s) | 6, 318, 461, 543, 675, 764, 926, 980, 1031 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 540, 672, 920, 1037 |
| HpyF3I | CTNAG | 2 cut(s) | 390, 535 |
| HpySE526I | ACGT | 3 cut(s) | 89, 177, 933 |
| Hsp92I | GRCGYC | 2 cut(s) | 177, 601 |
| Hsp92II | CATG | 5 cut(s) | 124, 461, 808, 839, 1007 |
| HspAI | GCGC | 4 cut(s) | 601, 878, 1023, 1038 |
| KasI | GGCGCC | 1 cut(s) | 600 |
| Kpn2I | TCCGGA | 1 cut(s) | 412 |
| Kzo9I | GATC | 3 cut(s) | 973, 996, 1073 |
| LmnI | GCTCC | 3 cut(s) | 289, 655, 920 |
| Lsp1109I | GCAGC | 2 cut(s) | 910, 1027 |
| LweI | GCATC | 2 cut(s) | 452, 472 |
| MaeI | CTAG | 3 cut(s) | 605, 753, 842 |
| MaeII | ACGT | 3 cut(s) | 89, 177, 933 |
| MaeIII | GTNAC | 2 cut(s) | 569, 736 |
| MalI | GATC | 3 cut(s) | 975, 998, 1075 |
| MboI | GATC | 3 cut(s) | 973, 996, 1073 |
| MflI | RGATCY | 1 cut(s) | 996 |
| MhlI | GDGCHC | 2 cut(s) | 294, 987 |
| MlsI | TGGCCA | 1 cut(s) | 166 |
| MluCI | AATT | 6 cut(s) | 310, 401, 432, 453, 586, 968 |
| MluNI | TGGCCA | 1 cut(s) | 166 |
| Mly113I | GGCGCC | 1 cut(s) | 601 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MmeI | TCCRAC | 2 cut(s) | 9, 920 |
| Mox20I | TGGCCA | 1 cut(s) | 166 |
| MroI | TCCGGA | 1 cut(s) | 412 |
| MscI | TGGCCA | 1 cut(s) | 166 |
| MseI | TTAA | 3 cut(s) | 75, 375, 515 |
| Msp20I | TGGCCA | 1 cut(s) | 166 |
| MspCI | CTTAAG | 1 cut(s) | 514 |
| MspI | CCGG | 6 cut(s) | 413, 615, 775, 816, 827, 1069 |
| MspR9I | CCNGG | 6 cut(s) | 104, 199, 616, 817, 963, 1070 |
| Mva1269I | GAATGC | 1 cut(s) | 926 |
| MvaI | CCWGG | 3 cut(s) | 104, 199, 963 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 540, 672, 920, 1037 |
| NarI | GGCGCC | 1 cut(s) | 601 |
| NciI | CCSGG | 3 cut(s) | 616, 817, 1070 |
| NcoI | CCATGG | 1 cut(s) | 804 |
| NdeII | GATC | 3 cut(s) | 973, 996, 1073 |
| NlaIII | CATG | 5 cut(s) | 124, 461, 808, 839, 1007 |
| NlaIV | GGNNCC | 1 cut(s) | 602 |
| NmeAIII | GCCGAG | 1 cut(s) | 999 |
| NmuCI | GTSAC | 1 cut(s) | 569 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 47 |
| PctI | GAATGC | 1 cut(s) | 926 |
| PfeI | GAWTC | 3 cut(s) | 416, 723, 823 |
| PflFI | GACNNNGTC | 1 cut(s) | 179 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1085 |
| PfoI | TCCNGGA | 1 cut(s) | 102 |
| PkrI | GCNGC | 2 cut(s) | 925, 1042 |
| PleI | GAGTC | 1 cut(s) | 34 |
| PluTI | GGCGCC | 1 cut(s) | 604 |
| PpsI | GAGTC | 1 cut(s) | 34 |
| PpuMI | RGGWCCY | 1 cut(s) | 106 |
| Psp124BI | GAGCTC | 1 cut(s) | 294 |
| Psp5II | RGGWCCY | 1 cut(s) | 106 |
| Psp6I | CCWGG | 3 cut(s) | 102, 197, 961 |
| PspFI | CCCAGC | 1 cut(s) | 880 |
| PspGI | CCWGG | 3 cut(s) | 102, 197, 961 |
| PspN4I | GGNNCC | 1 cut(s) | 602 |
| PspPI | GGNCC | 3 cut(s) | 106, 335, 370 |
| PspPPI | RGGWCCY | 1 cut(s) | 106 |
| PstNI | CAGNNNCTG | 1 cut(s) | 923 |
| PsuI | RGATCY | 1 cut(s) | 996 |
| PsyI | GACNNNGTC | 1 cut(s) | 179 |
| RsaI | GTAC | 2 cut(s) | 119, 399 |
| RsaNI | GTAC | 2 cut(s) | 118, 398 |
| SacI | GAGCTC | 1 cut(s) | 294 |
| SaqAI | TTAA | 3 cut(s) | 75, 375, 515 |
| SatI | GCNGC | 2 cut(s) | 924, 1041 |
| Sau3AI | GATC | 3 cut(s) | 973, 996, 1073 |
| Sau96I | GGNCC | 3 cut(s) | 106, 335, 370 |
| SchI | GAGTC | 1 cut(s) | 35 |
| ScrFI | CCNGG | 6 cut(s) | 104, 199, 616, 817, 963, 1070 |
| SduI | GDGCHC | 2 cut(s) | 294, 987 |
| SfaNI | GCATC | 2 cut(s) | 452, 472 |
| SfoI | GGCGCC | 1 cut(s) | 602 |
| SinI | GGWCC | 3 cut(s) | 106, 335, 370 |
| SmlI | CTYRAG | 2 cut(s) | 274, 514 |
| SmoI | CTYRAG | 2 cut(s) | 274, 514 |
| Sse9I | AATT | 6 cut(s) | 310, 401, 432, 453, 586, 968 |
| SsiI | CCGC | 1 cut(s) | 113 |
| SspDI | GGCGCC | 1 cut(s) | 600 |
| SspMI | CTAG | 3 cut(s) | 605, 753, 842 |
| SstI | GAGCTC | 1 cut(s) | 294 |
| StyD4I | CCNGG | 6 cut(s) | 102, 197, 614, 815, 961, 1068 |
| StyI | CCWWGG | 2 cut(s) | 500, 804 |
| TaaI | ACNGT | 3 cut(s) | 265, 339, 355 |
| TaiI | ACGT | 3 cut(s) | 92, 180, 936 |
| TasI | AATT | 6 cut(s) | 310, 401, 432, 453, 586, 968 |
| TatI | WGTACW | 2 cut(s) | 117, 397 |
| TfiI | GAWTC | 3 cut(s) | 416, 723, 823 |
| Tru1I | TTAA | 3 cut(s) | 75, 375, 515 |
| Tru9I | TTAA | 3 cut(s) | 75, 375, 515 |
| TscAI | CASTG | 3 cut(s) | 444, 857, 1053 |
| TseFI | GTSAC | 1 cut(s) | 569 |
| TseI | GCWGC | 2 cut(s) | 923, 1040 |
| Tsp45I | GTSAC | 1 cut(s) | 569 |
| TspDTI | ATGAA | 6 cut(s) | 110, 127, 137, 374, 446, 824 |
| TspGWI | ACGGA | 2 cut(s) | 302, 383 |
| TspRI | CASTG | 3 cut(s) | 444, 857, 1053 |
| Tth111I | GACNNNGTC | 1 cut(s) | 179 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1085 |
| Vha464I | CTTAAG | 1 cut(s) | 514 |
| VpaK11BI | GGWCC | 3 cut(s) | 106, 335, 370 |
| XapI | RAATTY | 2 cut(s) | 432, 968 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 498 |
| XspI | CTAG | 3 cut(s) | 605, 753, 842 |
| ZraI | GACGTC | 1 cut(s) | 178 |