Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011771

Physical Location & Seq

Genomic Coordinates Forward (+)

9660701 .. 9661936

Gene Structure 1236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G123300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 537 bp

ATGGCATTAACAATAAGCCAACTCTTAGTTTTAGCTGCAGCTTTCATCTATCTCTCTGCTTTCTGCTGCAAAATAGGGATGGCAGATGATTTTACACCTGAAAGAGGTGATGTGCCAGATCAAATAGGCTCTGCAGAGCAGGATCCAGCTCAAATTGTTGCCAAAGCCTTGCTGTGTTTCAATGATAAATATGTCTACAGCAGCTGTGAAGAGTCTTACAGATTGAATGAGAGTGGAGATCTCAAAGTGCCAGCAGCAAAAACTGACGAGTACTGCAACGGTCCATGTCTGCAAGAAACACACCTTGTGCTCGACTGTGTTGATAACATTTTGAGCAACTTCCTGTTCTACAACAAGGCCACGGTGCAAGATGTTAGAGATACGATTCAGGCCGGATGTGGCTACGGGGAAGAAAGAGGAAAATTCGATGTGCCTGAGCACATCAAAGCTGAGGGAAGCAAGGCATACAAGGCTGCAAATTACCAGATTCTAATTGGGCTTGTGGTGATGATCATGGGGAATGGATTGCTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Endosulfine

Protein Analysis

179

Amino Acids

19.51

Weight (kDa)

4.55

Isoelectric Point (pI)

32.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011771)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49350 AT5G49350
fragaria_vesca	FvH4_4g19330
malus_domestica	MD13G1157600.v1.1 MD16G1158500.v1.1
prunus_persica	Prupe.1G123300_v2.0.a1
pyrus_communis	pycom13g13490 pycom16g13340
rosa_chinensis	RchiOBHm_Chr4g0424351
rosa_laevigata	RLG00000007482
rosa_multiflora	Rmu_sc0005995.1_g000010
rosa_roxburghii	Rroxscaffold_5G00366300
rosa_rugosa	Rorug04G0196600 Rorug04G0196700
rosa_samantha	Rh4AG253000 Rh4BG258400 Rh4CG269400 Rh4DG252800
rosa_wichuraiana	Rw4G021820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	195
AclWI	GGATC	2 cut(s)	137, 150
AcsI	RAATTY	1 cut(s)	422
AdeI	CACNNNGTG	1 cut(s)	307
AfaI	GTAC	1 cut(s)	272
AfiI	CCNNNNNNNGG	1 cut(s)	104
AgsI	TTSAA	2 cut(s)	181, 226
AluBI	AGCT	5 cut(s)	35, 41, 149, 204, 449
AluI	AGCT	5 cut(s)	35, 41, 149, 204, 449
Alw21I	GWGCWC	2 cut(s)	312, 441
AlwI	GGATC	2 cut(s)	137, 150
AlwNI	CAGNNNCTG	1 cut(s)	204
AoxI	GGCC	2 cut(s)	357, 390
ApeKI	GCWGC	6 cut(s)	35, 38, 66, 201, 254, 473
ApoI	RAATTY	1 cut(s)	422
AspS9I	GGNCC	1 cut(s)	281
AsuHPI	GGTGA	2 cut(s)	119, 517
AvaII	GGWCC	1 cut(s)	281
BamHI	GGATCC	1 cut(s)	142
Bbv12I	GWGCWC	2 cut(s)	312, 441
BbvCI	CCTCAGC	1 cut(s)	450
BbvI	GCAGC	6 cut(s)	22, 50, 53, 213, 266, 460
BccI	CCATC	1 cut(s)	73
BclI	TGATCA	1 cut(s)	510
BfaI	CTAG	1 cut(s)	535
BfmI	CTRYAG	3 cut(s)	36, 132, 196
BglII	AGATCT	1 cut(s)	238
BisI	GCNGC	6 cut(s)	36, 39, 67, 202, 255, 474
BlsI	GCNGC	6 cut(s)	37, 40, 68, 203, 256, 475
BmcAI	AGTACT	1 cut(s)	272
Bme18I	GGWCC	1 cut(s)	281
BmgT120I	GGNCC	1 cut(s)	281
BmiI	GGNNCC	1 cut(s)	144
Bpu10I	CCTNAGC	2 cut(s)	435, 450
BsaJI	CCNNGG	1 cut(s)	360
Bsc4I	CCNNNNNNNGG	1 cut(s)	104
BseDI	CCNNGG	1 cut(s)	360
BseGI	GGATG	2 cut(s)	84, 401
BseLI	CCNNNNNNNGG	1 cut(s)	104
BseMII	CTCAG	2 cut(s)	426, 441
BseXI	GCAGC	6 cut(s)	22, 50, 53, 213, 266, 460
BshFI	GGCC	2 cut(s)	359, 392
BsiHKAI	GWGCWC	2 cut(s)	312, 441
BsiSI	CCGG	1 cut(s)	393
BslI	CCNNNNNNNGG	1 cut(s)	104
BsnI	GGCC	2 cut(s)	359, 392
Bsp1286I	GDGCHC	2 cut(s)	312, 441
Bsp143I	GATC	4 cut(s)	118, 142, 238, 510
BspANI	GGCC	2 cut(s)	359, 392
BspCNI	CTCAG	2 cut(s)	427, 442
BspLI	GGNNCC	1 cut(s)	144
BspMAI	CTGCAG	2 cut(s)	40, 136
BspPI	GGATC	2 cut(s)	137, 150
BssECI	CCNNGG	1 cut(s)	360
BssMI	GATC	4 cut(s)	118, 142, 238, 510
Bst4CI	ACNGT	3 cut(s)	281, 317, 364
Bst6I	CTCTTC	1 cut(s)	204
BstC8I	GCNNGC	1 cut(s)	252
BstDEI	CTNAG	3 cut(s)	25, 435, 450
BstDSI	CCRYGG	1 cut(s)	360
BstENI	CCTNNNNNAGG	1 cut(s)	102
BstF5I	GGATG	2 cut(s)	84, 401
BstKTI	GATC	4 cut(s)	121, 145, 241, 513
BstMBI	GATC	4 cut(s)	118, 142, 238, 510
BstMWI	GCNNNNNNNGC	1 cut(s)	470
BstSFI	CTRYAG	3 cut(s)	36, 132, 196
BstV1I	GCAGC	6 cut(s)	22, 50, 53, 213, 266, 460
BstX2I	RGATCY	2 cut(s)	142, 238
BstYI	RGATCY	2 cut(s)	142, 238
BsuRI	GGCC	2 cut(s)	359, 392
BtgI	CCRYGG	1 cut(s)	360
BtsCI	GGATG	2 cut(s)	84, 401
Cac8I	GCNNGC	1 cut(s)	252
CaiI	CAGNNNCTG	1 cut(s)	204
Cfr13I	GGNCC	1 cut(s)	281
Csp6I	GTAC	1 cut(s)	271
CviAII	CATG	2 cut(s)	285, 514
CviQI	GTAC	1 cut(s)	271
DdeI	CTNAG	3 cut(s)	25, 435, 450
DpnI	GATC	4 cut(s)	120, 144, 240, 512
DpnII	GATC	4 cut(s)	118, 142, 238, 510
DraIII	CACNNNGTG	1 cut(s)	307
Eam1104I	CTCTTC	1 cut(s)	204
EarI	CTCTTC	1 cut(s)	204
Eco47I	GGWCC	1 cut(s)	281
EcoNI	CCTNNNNNAGG	1 cut(s)	102
FaeI	CATG	2 cut(s)	288, 517
FaiI	YATR	4 cut(s)	192, 286, 466, 515
FatI	CATG	2 cut(s)	284, 513
FbaI	TGATCA	1 cut(s)	510
FblI	GTMKAC	1 cut(s)	195
Fnu4HI	GCNGC	6 cut(s)	36, 39, 67, 202, 255, 474
FokI	GGATG	2 cut(s)	91, 408
Fsp4HI	GCNGC	6 cut(s)	36, 39, 67, 202, 255, 474
FspBI	CTAG	1 cut(s)	535
GluI	GCNGC	6 cut(s)	36, 39, 67, 202, 255, 474
HaeIII	GGCC	2 cut(s)	359, 392
HapII	CCGG	1 cut(s)	393
Hin1II	CATG	2 cut(s)	288, 517
HinfI	GANTC	3 cut(s)	212, 385, 487
HpaII	CCGG	1 cut(s)	393
HphI	GGTGA	2 cut(s)	119, 517
Hpy166II	GTNNAC	1 cut(s)	196
Hpy8I	GTNNAC	1 cut(s)	196
HpyCH4III	ACNGT	3 cut(s)	281, 317, 364
HpyCH4V	TGCA	7 cut(s)	38, 69, 134, 276, 292, 367, 476
HpyF10VI	GCNNNNNNNGC	1 cut(s)	470
HpyF3I	CTNAG	3 cut(s)	25, 435, 450
Hsp92II	CATG	2 cut(s)	288, 517
Ksp22I	TGATCA	1 cut(s)	510
Kzo9I	GATC	4 cut(s)	118, 142, 238, 510
Lsp1109I	GCAGC	6 cut(s)	22, 50, 53, 213, 266, 460
MaeI	CTAG	1 cut(s)	535
MalI	GATC	4 cut(s)	120, 144, 240, 512
MboI	GATC	4 cut(s)	118, 142, 238, 510
MboII	GAAGA	2 cut(s)	221, 422
MflI	RGATCY	2 cut(s)	142, 238
MhlI	GDGCHC	2 cut(s)	312, 441
MluCI	AATT	4 cut(s)	153, 422, 478, 492
MlyI	GAGTC	1 cut(s)	221
MnlI	CCTC	3 cut(s)	98, 410, 445
MseI	TTAA	1 cut(s)	8
MspA1I	CMGCKG	1 cut(s)	204
MspI	CCGG	1 cut(s)	393
MwoI	GCNNNNNNNGC	1 cut(s)	470
NdeII	GATC	4 cut(s)	118, 142, 238, 510
NlaIII	CATG	2 cut(s)	288, 517
NlaIV	GGNNCC	1 cut(s)	144
PfeI	GAWTC	2 cut(s)	385, 487
PkrI	GCNGC	6 cut(s)	37, 40, 68, 203, 256, 475
PleI	GAGTC	1 cut(s)	220
PpsI	GAGTC	1 cut(s)	220
PspN4I	GGNNCC	1 cut(s)	144
PspPI	GGNCC	1 cut(s)	281
PstI	CTGCAG	2 cut(s)	40, 136
PstNI	CAGNNNCTG	1 cut(s)	204
PsuI	RGATCY	2 cut(s)	142, 238
PvuII	CAGCTG	1 cut(s)	204
RsaI	GTAC	1 cut(s)	272
RsaNI	GTAC	1 cut(s)	271
SaqAI	TTAA	1 cut(s)	8
SatI	GCNGC	6 cut(s)	36, 39, 67, 202, 255, 474
Sau3AI	GATC	4 cut(s)	118, 142, 238, 510
Sau96I	GGNCC	1 cut(s)	281
ScaI	AGTACT	1 cut(s)	272
SchI	GAGTC	1 cut(s)	221
SduI	GDGCHC	2 cut(s)	312, 441
SetI	ASST	8 cut(s)	37, 43, 100, 109, 151, 206, 306, 451
SfcI	CTRYAG	3 cut(s)	36, 132, 196
SinI	GGWCC	1 cut(s)	281
Sse9I	AATT	4 cut(s)	153, 422, 478, 492
SspMI	CTAG	1 cut(s)	535
TaaI	ACNGT	3 cut(s)	281, 317, 364
TaqI	TCGA	2 cut(s)	312, 426
TasI	AATT	4 cut(s)	153, 422, 478, 492
TatI	WGTACW	1 cut(s)	270
TfiI	GAWTC	2 cut(s)	385, 487
Tru1I	TTAA	1 cut(s)	8
Tru9I	TTAA	1 cut(s)	8
TseI	GCWGC	6 cut(s)	35, 38, 66, 201, 254, 473
TspDTI	ATGAA	1 cut(s)	34
VpaK11BI	GGWCC	1 cut(s)	281
XagI	CCTNNNNNAGG	1 cut(s)	102
XapI	RAATTY	1 cut(s)	422
XcmI	CCANNNNNNNNNTGG	1 cut(s)	491
XmiI	GTMKAC	1 cut(s)	195
XspI	CTAG	1 cut(s)	535
ZrmI	AGTACT	1 cut(s)	272

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.