Rieske-like [2Fe-2S] domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G71500 |
| fragaria_vesca | FvH4_1g25280 FvH4_1g25280 |
| malus_domestica | MD15G1137600.v1.1 |
| prunus_persica | Prupe.1G128000_v2.0.a1 |
| pyrus_communis | pycom15g12400 |
| rosa_chinensis | RchiOBHm_Chr2g0123251 |
| rosa_laevigata | RLG00000018744 |
| rosa_multiflora | Rmu_sc0011914.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00120820 |
| rosa_rugosa | Rorug02G0244200 |
| rosa_samantha | Rh2AG303400 Rh2BG311300 Rh2CG290000 Rh2DG327400 |
| rosa_wichuraiana | Rw0G013110 Rw2G024270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 76 |
| Acc16I | TGCGCA | 1 cut(s) | 473 |
| Acc36I | ACCTGC | 1 cut(s) | 76 |
| Acc65I | GGTACC | 1 cut(s) | 256 |
| AccB1I | GGYRCC | 2 cut(s) | 183, 256 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 193 |
| AccBSI | CCGCTC | 1 cut(s) | 295 |
| AccI | GTMKAC | 1 cut(s) | 552 |
| AccII | CGCG | 3 cut(s) | 278, 300, 740 |
| AclWI | GGATC | 2 cut(s) | 474, 487 |
| AcoI | YGGCCR | 1 cut(s) | 273 |
| AcuI | CTGAAG | 2 cut(s) | 402, 622 |
| AcyI | GRCGYC | 1 cut(s) | 227 |
| AdeI | CACNNNGTG | 1 cut(s) | 157 |
| AfaI | GTAC | 1 cut(s) | 258 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 193, 383, 429, 537 |
| AgeI | ACCGGT | 1 cut(s) | 259 |
| AgsI | TTSAA | 2 cut(s) | 311, 803 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 217 |
| AjnI | CCWGG | 1 cut(s) | 423 |
| AluBI | AGCT | 4 cut(s) | 418, 623, 668, 770 |
| AluI | AGCT | 4 cut(s) | 418, 623, 668, 770 |
| Alw21I | GWGCWC | 1 cut(s) | 516 |
| AlwI | GGATC | 2 cut(s) | 474, 487 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 109, 671 |
| AoxI | GGCC | 3 cut(s) | 3, 273, 400 |
| ApeKI | GCWGC | 6 cut(s) | 71, 280, 599, 620, 623, 767 |
| AsiGI | ACCGGT | 1 cut(s) | 259 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 402 |
| Asp718I | GGTACC | 1 cut(s) | 256 |
| AspLEI | GCGC | 3 cut(s) | 280, 300, 474 |
| AsuC2I | CCSGG | 1 cut(s) | 657 |
| AsuHPI | GGTGA | 4 cut(s) | 6, 412, 703, 727 |
| BamHI | GGATCC | 1 cut(s) | 479 |
| BanI | GGYRCC | 2 cut(s) | 183, 256 |
| BbsI | GAAGAC | 2 cut(s) | 628, 815 |
| Bbv12I | GWGCWC | 1 cut(s) | 516 |
| BbvI | GCAGC | 6 cut(s) | 58, 267, 586, 610, 632, 779 |
| BccI | CCATC | 5 cut(s) | 54, 187, 308, 422, 454 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 198, 232 |
| BciT130I | CCWGG | 1 cut(s) | 425 |
| BciVI | GTATCC | 1 cut(s) | 507 |
| BcnI | CCSGG | 1 cut(s) | 657 |
| BfaI | CTAG | 1 cut(s) | 716 |
| BfuAI | ACCTGC | 1 cut(s) | 76 |
| BfuI | GTATCC | 1 cut(s) | 507 |
| Bme1390I | CCNGG | 2 cut(s) | 425, 657 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 217 |
| BmiI | GGNNCC | 4 cut(s) | 185, 258, 481, 782 |
| BmrFI | CCNGG | 2 cut(s) | 425, 657 |
| BmrI | ACTGGG | 1 cut(s) | 503 |
| BmsI | GCATC | 2 cut(s) | 83, 607 |
| BmuI | ACTGGG | 1 cut(s) | 503 |
| BpiI | GAAGAC | 2 cut(s) | 628, 815 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 356, 388 |
| BpuEI | CTTGAG | 1 cut(s) | 812 |
| BpuMI | CCSGG | 1 cut(s) | 657 |
| BsaHI | GRCGYC | 1 cut(s) | 227 |
| BsaJI | CCNNGG | 4 cut(s) | 127, 284, 423, 592 |
| BsaWI | WCCGGW | 1 cut(s) | 259 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 193, 383, 429, 537 |
| Bse118I | RCCGGY | 1 cut(s) | 259 |
| Bse1I | ACTGG | 4 cut(s) | 276, 509, 817, 841 |
| Bse3DI | GCAATG | 1 cut(s) | 29 |
| BseBI | CCWGG | 1 cut(s) | 425 |
| BseDI | CCNNGG | 4 cut(s) | 127, 284, 423, 592 |
| BseGI | GGATG | 4 cut(s) | 58, 74, 433, 691 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 193, 383, 429, 537 |
| BseMI | GCAATG | 1 cut(s) | 29 |
| BseNI | ACTGG | 4 cut(s) | 276, 509, 817, 841 |
| BseXI | GCAGC | 6 cut(s) | 58, 267, 586, 610, 632, 779 |
| Bsh1236I | CGCG | 3 cut(s) | 278, 300, 740 |
| BshFI | GGCC | 3 cut(s) | 5, 275, 402 |
| BshNI | GGYRCC | 2 cut(s) | 183, 256 |
| BshTI | ACCGGT | 1 cut(s) | 259 |
| BsiHKAI | GWGCWC | 1 cut(s) | 516 |
| BsiSI | CCGG | 2 cut(s) | 260, 656 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 193, 383, 429, 537 |
| BsnI | GGCC | 3 cut(s) | 5, 275, 402 |
| Bsp1286I | GDGCHC | 1 cut(s) | 516 |
| Bsp143I | GATC | 3 cut(s) | 346, 466, 479 |
| BspANI | GGCC | 3 cut(s) | 5, 275, 402 |
| BspFNI | CGCG | 3 cut(s) | 278, 300, 740 |
| BspLI | GGNNCC | 4 cut(s) | 185, 258, 481, 782 |
| BspMI | ACCTGC | 1 cut(s) | 76 |
| BspPI | GGATC | 2 cut(s) | 474, 487 |
| BspT107I | GGYRCC | 2 cut(s) | 183, 256 |
| BsrBI | CCGCTC | 1 cut(s) | 295 |
| BsrDI | GCAATG | 1 cut(s) | 29 |
| BsrFI | RCCGGY | 1 cut(s) | 259 |
| BsrI | ACTGG | 4 cut(s) | 276, 509, 817, 841 |
| BssAI | RCCGGY | 1 cut(s) | 259 |
| BssECI | CCNNGG | 4 cut(s) | 127, 284, 423, 592 |
| BssMI | GATC | 3 cut(s) | 346, 466, 479 |
| BssNI | GRCGYC | 1 cut(s) | 227 |
| BssT1I | CCWWGG | 1 cut(s) | 284 |
| Bst2UI | CCWGG | 1 cut(s) | 425 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 713 |
| BstACI | GRCGYC | 1 cut(s) | 227 |
| BstDEI | CTNAG | 1 cut(s) | 89 |
| BstDSI | CCRYGG | 1 cut(s) | 127 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 381 |
| BstF5I | GGATG | 4 cut(s) | 58, 74, 433, 691 |
| BstFNI | CGCG | 3 cut(s) | 278, 300, 740 |
| BstHHI | GCGC | 3 cut(s) | 280, 300, 474 |
| BstKTI | GATC | 3 cut(s) | 349, 469, 482 |
| BstMBI | GATC | 3 cut(s) | 346, 466, 479 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 240, 386 |
| BstNI | CCWGG | 1 cut(s) | 425 |
| BstSCI | CCNGG | 2 cut(s) | 423, 655 |
| BstUI | CGCG | 3 cut(s) | 278, 300, 740 |
| BstV1I | GCAGC | 6 cut(s) | 58, 267, 586, 610, 632, 779 |
| BstV2I | GAAGAC | 2 cut(s) | 628, 815 |
| BstX2I | RGATCY | 1 cut(s) | 479 |
| BstYI | RGATCY | 1 cut(s) | 479 |
| BsuI | GTATCC | 1 cut(s) | 507 |
| BsuRI | GGCC | 3 cut(s) | 5, 275, 402 |
| BtgI | CCRYGG | 1 cut(s) | 127 |
| BtgZI | GCGATG | 1 cut(s) | 206 |
| BtsCI | GGATG | 4 cut(s) | 58, 74, 433, 691 |
| BtsIMutI | CAGTG | 3 cut(s) | 269, 516, 646 |
| BveI | ACCTGC | 1 cut(s) | 76 |
| CaiI | CAGNNNCTG | 2 cut(s) | 109, 671 |
| CfoI | GCGC | 3 cut(s) | 280, 300, 474 |
| Cfr10I | RCCGGY | 1 cut(s) | 259 |
| CseI | GACGC | 3 cut(s) | 216, 289, 550 |
| Csp6I | GTAC | 1 cut(s) | 257 |
| CspAI | ACCGGT | 1 cut(s) | 259 |
| CviQI | GTAC | 1 cut(s) | 257 |
| DdeI | CTNAG | 1 cut(s) | 89 |
| DpnI | GATC | 3 cut(s) | 348, 468, 481 |
| DpnII | GATC | 3 cut(s) | 346, 466, 479 |
| DraIII | CACNNNGTG | 1 cut(s) | 157 |
| DriI | GACNNNNNGTC | 1 cut(s) | 217 |
| EaeI | YGGCCR | 1 cut(s) | 273 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 217 |
| Eco130I | CCWWGG | 1 cut(s) | 284 |
| Eco147I | AGGCCT | 1 cut(s) | 402 |
| Eco57I | CTGAAG | 2 cut(s) | 402, 622 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 381 |
| EcoRII | CCWGG | 1 cut(s) | 423 |
| EcoT14I | CCWWGG | 1 cut(s) | 284 |
| ErhI | CCWWGG | 1 cut(s) | 284 |
| FaiI | YATR | 7 cut(s) | 117, 305, 326, 342, 393, 437, 755 |
| FauI | CCCGC | 4 cut(s) | 34, 86, 236, 538 |
| FblI | GTMKAC | 1 cut(s) | 552 |
| FokI | GGATG | 4 cut(s) | 45, 61, 440, 698 |
| FspBI | CTAG | 1 cut(s) | 716 |
| FspI | TGCGCA | 1 cut(s) | 473 |
| GlaI | GCGC | 3 cut(s) | 279, 299, 473 |
| HaeIII | GGCC | 3 cut(s) | 5, 275, 402 |
| HapII | CCGG | 2 cut(s) | 260, 656 |
| HgaI | GACGC | 3 cut(s) | 216, 289, 550 |
| HhaI | GCGC | 3 cut(s) | 280, 300, 474 |
| Hin1I | GRCGYC | 1 cut(s) | 227 |
| Hin6I | GCGC | 3 cut(s) | 278, 298, 472 |
| HinP1I | GCGC | 3 cut(s) | 278, 298, 472 |
| HinfI | GANTC | 2 cut(s) | 367, 519 |
| HpaII | CCGG | 2 cut(s) | 260, 656 |
| HphI | GGTGA | 4 cut(s) | 6, 412, 703, 727 |
| Hpy166II | GTNNAC | 1 cut(s) | 553 |
| Hpy188I | TCNGA | 3 cut(s) | 168, 518, 616 |
| Hpy188III | TCNNGA | 3 cut(s) | 311, 716, 808 |
| Hpy8I | GTNNAC | 1 cut(s) | 553 |
| Hpy99I | CGWCG | 4 cut(s) | 168, 181, 223, 226 |
| HpyAV | CCTTC | 5 cut(s) | 28, 377, 392, 413, 757 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 713 |
| HpyCH4IV | ACGT | 1 cut(s) | 549 |
| HpyCH4V | TGCA | 4 cut(s) | 74, 140, 620, 877 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 240, 386 |
| HpyF3I | CTNAG | 1 cut(s) | 89 |
| HpySE526I | ACGT | 1 cut(s) | 549 |
| Hsp92I | GRCGYC | 1 cut(s) | 227 |
| HspAI | GCGC | 3 cut(s) | 278, 298, 472 |
| KpnI | GGTACC | 1 cut(s) | 260 |
| Kzo9I | GATC | 3 cut(s) | 346, 466, 479 |
| LmnI | GCTCC | 3 cut(s) | 292, 377, 519 |
| Lsp1109I | GCAGC | 6 cut(s) | 58, 267, 586, 610, 632, 779 |
| LweI | GCATC | 2 cut(s) | 83, 607 |
| MaeI | CTAG | 1 cut(s) | 716 |
| MaeII | ACGT | 1 cut(s) | 549 |
| MalI | GATC | 3 cut(s) | 348, 468, 481 |
| MbiI | CCGCTC | 1 cut(s) | 295 |
| MboI | GATC | 3 cut(s) | 346, 466, 479 |
| MboII | GAAGA | 2 cut(s) | 628, 815 |
| MflI | RGATCY | 1 cut(s) | 479 |
| MhlI | GDGCHC | 1 cut(s) | 516 |
| MluCI | AATT | 6 cut(s) | 40, 118, 145, 250, 306, 630 |
| MlyI | GAGTC | 1 cut(s) | 528 |
| MmeI | TCCRAC | 1 cut(s) | 146 |
| MroXI | GAANNNNTTC | 1 cut(s) | 402 |
| MseI | TTAA | 2 cut(s) | 135, 486 |
| MspA1I | CMGCKG | 2 cut(s) | 623, 770 |
| MspI | CCGG | 2 cut(s) | 260, 656 |
| MspR9I | CCNGG | 2 cut(s) | 425, 657 |
| MvaI | CCWGG | 1 cut(s) | 425 |
| MvnI | CGCG | 3 cut(s) | 278, 300, 740 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 240, 386 |
| NciI | CCSGG | 1 cut(s) | 657 |
| NdeII | GATC | 3 cut(s) | 346, 466, 479 |
| NlaIV | GGNNCC | 4 cut(s) | 185, 258, 481, 782 |
| NsbI | TGCGCA | 1 cut(s) | 473 |
| PaqCI | CACCTGC | 1 cut(s) | 76 |
| PceI | AGGCCT | 1 cut(s) | 402 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 224 |
| PdmI | GAANNNNTTC | 1 cut(s) | 402 |
| PfeI | GAWTC | 1 cut(s) | 367 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 193 |
| PinAI | ACCGGT | 1 cut(s) | 259 |
| PleI | GAGTC | 1 cut(s) | 527 |
| PpsI | GAGTC | 1 cut(s) | 527 |
| Psp6I | CCWGG | 1 cut(s) | 423 |
| PspGI | CCWGG | 1 cut(s) | 423 |
| PspN4I | GGNNCC | 4 cut(s) | 185, 258, 481, 782 |
| PstNI | CAGNNNCTG | 2 cut(s) | 109, 671 |
| PsuI | RGATCY | 1 cut(s) | 479 |
| PvuII | CAGCTG | 2 cut(s) | 623, 770 |
| RsaI | GTAC | 1 cut(s) | 258 |
| RsaNI | GTAC | 1 cut(s) | 257 |
| SaqAI | TTAA | 2 cut(s) | 135, 486 |
| Sau3AI | GATC | 3 cut(s) | 346, 466, 479 |
| SchI | GAGTC | 1 cut(s) | 528 |
| ScrFI | CCNGG | 2 cut(s) | 425, 657 |
| SduI | GDGCHC | 1 cut(s) | 516 |
| SfaNI | GCATC | 2 cut(s) | 83, 607 |
| SmlI | CTYRAG | 1 cut(s) | 827 |
| SmoI | CTYRAG | 1 cut(s) | 827 |
| Sse9I | AATT | 6 cut(s) | 40, 118, 145, 250, 306, 630 |
| SseBI | AGGCCT | 1 cut(s) | 402 |
| SspMI | CTAG | 1 cut(s) | 716 |
| StuI | AGGCCT | 1 cut(s) | 402 |
| StyD4I | CCNGG | 2 cut(s) | 423, 655 |
| StyI | CCWWGG | 1 cut(s) | 284 |
| TaaI | ACNGT | 2 cut(s) | 131, 713 |
| TaiI | ACGT | 1 cut(s) | 552 |
| TasI | AATT | 6 cut(s) | 40, 118, 145, 250, 306, 630 |
| TauI | GCSGC | 6 cut(s) | 115, 237, 240, 243, 278, 298 |
| TfiI | GAWTC | 1 cut(s) | 367 |
| Tru1I | TTAA | 2 cut(s) | 135, 486 |
| Tru9I | TTAA | 2 cut(s) | 135, 486 |
| TscAI | CASTG | 3 cut(s) | 276, 516, 646 |
| TseI | GCWGC | 6 cut(s) | 71, 280, 599, 620, 623, 767 |
| TspGWI | ACGGA | 1 cut(s) | 492 |
| TspRI | CASTG | 3 cut(s) | 276, 516, 646 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 193 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 381 |
| XbaI | TCTAGA | 1 cut(s) | 715 |
| XmiI | GTMKAC | 1 cut(s) | 552 |
| XmnI | GAANNNNTTC | 1 cut(s) | 402 |
| XspI | CTAG | 1 cut(s) | 716 |