Prupe.1G128900_v2.0.a1

Major allergen Pru ar 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
10055524 .. 10056490
967 bp
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UTR
Exon/CDS
Intron
Prupe.1G128900.1

Sequence Viewer

Length: 492 bp
ATGGGGTTCACCAAAGTAAGCCAGAAATTTGTGACTCAGGTAACTCCAGAGAGGATGTTCAAGGCCTTGGTCCTTGATGCCCACAACATCTGCCCCAAGCTCATGTTTTCATCAATCAAAAGTATTGATTTCGTTGAAGGTGAAGGGGAGGTAGGAACCATCAAACAGATCAACTTCACTGAAGCTAGCCCTATGAGATATGTGAAGCACAGGATTGATGCTCTGGACAAAGAGGCACTCAGTTGCACCTACACTTTCATAGAAACCAATGCAGAAAATAGTTTGCTAGAAAAGCTTGAATACATAACTTATGATGTCAAGTTTGAGGGATATGGCAGAGGAGGATGCATATGTAATTTGACAAGCACATACAAAGCCAAAGATGATATACATATCAAAGAAGAGGACATTGAGCTTGGAAAAGACAGAGCTATTGGGATGTATGAAGTTTTGGAAGCCTACCTCATGGCACACCCTCGTGCCTACACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

164

Amino Acids

18.57

Weight (kDa)

5.43

Isoelectric Point (pI)

26.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 26
AcuI CTGAAG 1 cut(s) 201
AgsI TTSAA 3 cut(s) 61, 137, 299
AleI CACNNNNGTG 1 cut(s) 477
AluBI AGCT 5 cut(s) 100, 185, 295, 415, 431
AluI AGCT 5 cut(s) 100, 185, 295, 415, 431
AoxI GGCC 1 cut(s) 63
ApoI RAATTY 1 cut(s) 26
AspS9I GGNCC 1 cut(s) 70
AsuHPI GGTGA 1 cut(s) 152
AsuNHI GCTAGC 1 cut(s) 185
AvaII GGWCC 1 cut(s) 70
BauI CACGAG 1 cut(s) 477
BccI CCATC 1 cut(s) 167
BfaI CTAG 2 cut(s) 186, 287
Bme18I GGWCC 1 cut(s) 70
BmgT120I GGNCC 1 cut(s) 70
BmiI GGNNCC 1 cut(s) 157
BmsI GCATC 3 cut(s) 67, 208, 335
BmtI GCTAGC 1 cut(s) 189
BpmI CTGGAG 1 cut(s) 30
BsaJI CCNNGG 1 cut(s) 66
BseDI CCNNGG 1 cut(s) 66
BseGI GGATG 3 cut(s) 60, 350, 444
BseMII CTCAG 2 cut(s) 50, 253
BseRI GAGGAG 1 cut(s) 354
BshFI GGCC 1 cut(s) 65
BsnI GGCC 1 cut(s) 65
Bsp143I GATC 1 cut(s) 168
BspANI GGCC 1 cut(s) 65
BspCNI CTCAG 2 cut(s) 49, 252
BspLI GGNNCC 1 cut(s) 157
BspOI GCTAGC 1 cut(s) 189
BssECI CCNNGG 1 cut(s) 66
BssMI GATC 1 cut(s) 168
BssSI CACGAG 1 cut(s) 477
BssT1I CCWWGG 1 cut(s) 66
Bst2BI CACGAG 1 cut(s) 477
Bst6I CTCTTC 1 cut(s) 396
BstC8I GCNNGC 1 cut(s) 187
BstDEI CTNAG 2 cut(s) 36, 239
BstF5I GGATG 3 cut(s) 60, 350, 444
BstKTI GATC 1 cut(s) 171
BstMBI GATC 1 cut(s) 168
BstMWI GCNNNNNNNGC 1 cut(s) 292
BsuRI GGCC 1 cut(s) 65
BtsCI GGATG 3 cut(s) 60, 350, 444
BtsIMutI CAGTG 1 cut(s) 177
Cac8I GCNNGC 1 cut(s) 187
Cfr13I GGNCC 1 cut(s) 70
CviAII CATG 2 cut(s) 103, 466
DdeI CTNAG 2 cut(s) 36, 239
DpnI GATC 1 cut(s) 170
DpnII GATC 1 cut(s) 168
Eam1104I CTCTTC 1 cut(s) 396
EarI CTCTTC 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 66
Eco147I AGGCCT 1 cut(s) 65
Eco47I GGWCC 1 cut(s) 70
Eco57I CTGAAG 1 cut(s) 201
EcoT14I CCWWGG 1 cut(s) 66
EcoT22I ATGCAT 1 cut(s) 350
ErhI CCWWGG 1 cut(s) 66
FaeI CATG 2 cut(s) 106, 469
FatI CATG 2 cut(s) 102, 465
FauNDI CATATG 1 cut(s) 350
FokI GGATG 3 cut(s) 67, 357, 451
FspBI CTAG 2 cut(s) 186, 287
GsuI CTGGAG 1 cut(s) 30
HaeIII GGCC 1 cut(s) 65
Hin1II CATG 2 cut(s) 106, 469
HindIII AAGCTT 1 cut(s) 293
HinfI GANTC 1 cut(s) 34
HphI GGTGA 1 cut(s) 152
Hpy166II GTNNAC 1 cut(s) 9
Hpy188III TCNNGA 2 cut(s) 47, 224
Hpy8I GTNNAC 1 cut(s) 9
HpyAV CCTTC 2 cut(s) 131, 137
HpyCH4V TGCA 3 cut(s) 246, 272, 348
HpyF10VI GCNNNNNNNGC 1 cut(s) 292
HpyF3I CTNAG 2 cut(s) 36, 239
Hsp92II CATG 2 cut(s) 106, 469
Kzo9I GATC 1 cut(s) 168
LpnPI CCDG 5 cut(s) 23, 35, 60, 196, 209
LweI GCATC 3 cut(s) 67, 208, 335
MaeI CTAG 2 cut(s) 186, 287
MaeIII GTNAC 2 cut(s) 31, 40
MalI GATC 1 cut(s) 170
MboI GATC 1 cut(s) 168
MboII GAAGA 1 cut(s) 413
MluCI AATT 2 cut(s) 26, 355
MlyI GAGTC 1 cut(s) 28
MnlI CCTC 9 cut(s) 45, 142, 226, 319, 332, 335, 397, 473, 486
Mph1103I ATGCAT 1 cut(s) 350
MseI TTAA 1 cut(s) 490
MslI CAYNNNNRTG 1 cut(s) 477
MwoI GCNNNNNNNGC 1 cut(s) 292
NdeI CATATG 1 cut(s) 350
NdeII GATC 1 cut(s) 168
NheI GCTAGC 1 cut(s) 185
NlaIII CATG 2 cut(s) 106, 469
NlaIV GGNNCC 1 cut(s) 157
NmuCI GTSAC 1 cut(s) 31
NsiI ATGCAT 1 cut(s) 350
OliI CACNNNNGTG 1 cut(s) 477
PceI AGGCCT 1 cut(s) 65
PleI GAGTC 1 cut(s) 28
PpsI GAGTC 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 157
PspPI GGNCC 1 cut(s) 70
RseI CAYNNNNRTG 1 cut(s) 477
SaqAI TTAA 1 cut(s) 490
Sau3AI GATC 1 cut(s) 168
Sau96I GGNCC 1 cut(s) 70
SchI GAGTC 1 cut(s) 28
SfaNI GCATC 3 cut(s) 67, 208, 335
SinI GGWCC 1 cut(s) 70
SmiMI CAYNNNNRTG 1 cut(s) 477
Sse9I AATT 2 cut(s) 26, 355
SseBI AGGCCT 1 cut(s) 65
SspMI CTAG 2 cut(s) 186, 287
StuI AGGCCT 1 cut(s) 65
StyI CCWWGG 1 cut(s) 66
TasI AATT 2 cut(s) 26, 355
Tru1I TTAA 1 cut(s) 490
Tru9I TTAA 1 cut(s) 490
TscAI CASTG 1 cut(s) 184
TseFI GTSAC 1 cut(s) 31
Tsp45I GTSAC 1 cut(s) 31
TspDTI ATGAA 3 cut(s) 99, 247, 459
TspRI CASTG 1 cut(s) 184
VpaK11BI GGWCC 1 cut(s) 70
XapI RAATTY 1 cut(s) 26
XspI CTAG 2 cut(s) 186, 287
Zsp2I ATGCAT 1 cut(s) 350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.