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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G59670 |
| fragaria_vesca | FvH4_5g30050 |
| malus_domestica | MD04G1049200.v1.1 MD17G1177900.v1.1 |
| prunus_persica | Prupe.1G207400_v2.0.a1 Prupe.1G207400_v2.0.a1 |
| pyrus_communis | pycom04g04340 pycom17g18680 pycom17g18690 |
| rosa_chinensis | RchiOBHm_Chr7g0224241 |
| rosa_laevigata | RLG00000001911 |
| rosa_multiflora | Rmu_sc0008008.1_g000002 Rmu_sc0023501.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00235030 |
| rosa_rugosa | Rorug07G0221600 |
| rosa_samantha | Rh7AG366500 Rh7BG330000 Rh7BG357500 Rh7CG384800 Rh7DG360400 |
| rosa_wichuraiana | Rw7G030990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1247 |
| AccI | GTMKAC | 1 cut(s) | 43 |
| AccIII | TCCGGA | 1 cut(s) | 323 |
| AciI | CCGC | 3 cut(s) | 110, 362, 628 |
| AclWI | GGATC | 3 cut(s) | 732, 737, 1412 |
| AcsI | RAATTY | 5 cut(s) | 316, 590, 770, 988, 1486 |
| AcuI | CTGAAG | 2 cut(s) | 1323, 1461 |
| AfaI | GTAC | 3 cut(s) | 754, 1005, 1115 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1247 |
| AgsI | TTSAA | 9 cut(s) | 180, 215, 282, 410, 506, 671, 728, 1095, 1193 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 301 |
| AluBI | AGCT | 9 cut(s) | 285, 535, 641, 1026, 1082, 1301, 1475, 1526, 1572 |
| AluI | AGCT | 9 cut(s) | 285, 535, 641, 1026, 1082, 1301, 1475, 1526, 1572 |
| Alw21I | GWGCWC | 2 cut(s) | 188, 912 |
| Alw26I | GTCTC | 6 cut(s) | 354, 668, 896, 1056, 1245, 1343 |
| Alw44I | GTGCAC | 2 cut(s) | 184, 908 |
| AlwI | GGATC | 3 cut(s) | 732, 737, 1412 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1415 |
| Ama87I | CYCGRG | 2 cut(s) | 915, 1555 |
| Aor13HI | TCCGGA | 1 cut(s) | 323 |
| ApaLI | GTGCAC | 2 cut(s) | 184, 908 |
| ApeKI | GCWGC | 4 cut(s) | 107, 237, 471, 1298 |
| ApoI | RAATTY | 5 cut(s) | 316, 590, 770, 988, 1486 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 559 |
| AspLEI | GCGC | 2 cut(s) | 471, 660 |
| AspS9I | GGNCC | 2 cut(s) | 259, 1388 |
| AsuHPI | GGTGA | 3 cut(s) | 845, 878, 1219 |
| AsuII | TTCGAA | 1 cut(s) | 1323 |
| AvaI | CYCGRG | 2 cut(s) | 915, 1555 |
| AvaII | GGWCC | 2 cut(s) | 259, 1388 |
| AxyI | CCTNAGG | 1 cut(s) | 1443 |
| BaeGI | GKGCMC | 2 cut(s) | 188, 912 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 961, 993 |
| Bbv12I | GWGCWC | 2 cut(s) | 188, 912 |
| BbvI | GCAGC | 4 cut(s) | 94, 249, 458, 1310 |
| BccI | CCATC | 5 cut(s) | 55, 475, 857, 1242, 1411 |
| BcoDI | GTCTC | 6 cut(s) | 354, 668, 896, 1056, 1245, 1343 |
| BfaI | CTAG | 3 cut(s) | 618, 1460, 1494 |
| BfmI | CTRYAG | 3 cut(s) | 40, 242, 1200 |
| BfoI | RGCGCY | 1 cut(s) | 472 |
| BisI | GCNGC | 5 cut(s) | 108, 238, 472, 628, 1299 |
| BlsI | GCNGC | 5 cut(s) | 109, 239, 473, 629, 1300 |
| BmcAI | AGTACT | 1 cut(s) | 754 |
| Bme18I | GGWCC | 2 cut(s) | 259, 1388 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 301 |
| BmeT110I | CYCGRG | 2 cut(s) | 915, 1555 |
| BmgT120I | GGNCC | 2 cut(s) | 259, 1388 |
| BmiI | GGNNCC | 2 cut(s) | 6, 261 |
| BmsI | GCATC | 6 cut(s) | 256, 379, 386, 698, 1420, 1442 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1210 |
| BpmI | CTGGAG | 2 cut(s) | 460, 1098 |
| Bpu14I | TTCGAA | 1 cut(s) | 1323 |
| BpuEI | CTTGAG | 1 cut(s) | 1240 |
| Bsa29I | ATCGAT | 1 cut(s) | 942 |
| BsaJI | CCNNGG | 1 cut(s) | 876 |
| BsaWI | WCCGGW | 1 cut(s) | 323 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1116, 1146 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1247 |
| Bse1I | ACTGG | 3 cut(s) | 443, 835, 845 |
| Bse21I | CCTNAGG | 1 cut(s) | 1443 |
| Bse3DI | GCAATG | 1 cut(s) | 1063 |
| BseAI | TCCGGA | 1 cut(s) | 323 |
| BseCI | ATCGAT | 1 cut(s) | 942 |
| BseDI | CCNNGG | 1 cut(s) | 876 |
| BseGI | GGATG | 3 cut(s) | 162, 199, 486 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1247 |
| BseMI | GCAATG | 1 cut(s) | 1063 |
| BseMII | CTCAG | 5 cut(s) | 246, 303, 365, 838, 1457 |
| BseNI | ACTGG | 3 cut(s) | 443, 835, 845 |
| BseRI | GAGGAG | 2 cut(s) | 664, 1527 |
| BseSI | GKGCMC | 2 cut(s) | 188, 912 |
| BseXI | GCAGC | 4 cut(s) | 94, 249, 458, 1310 |
| BsgI | GTGCAG | 2 cut(s) | 365, 1167 |
| BshVI | ATCGAT | 1 cut(s) | 942 |
| BsiHKAI | GWGCWC | 2 cut(s) | 188, 912 |
| BsiHKCI | CYCGRG | 2 cut(s) | 915, 1555 |
| BsiSI | CCGG | 1 cut(s) | 324 |
| BslFI | GGGAC | 1 cut(s) | 458 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1247 |
| BsmAI | GTCTC | 6 cut(s) | 354, 668, 896, 1056, 1245, 1343 |
| BsmFI | GGGAC | 1 cut(s) | 458 |
| BsmI | GAATGC | 2 cut(s) | 221, 967 |
| BsoBI | CYCGRG | 2 cut(s) | 915, 1555 |
| Bsp119I | TTCGAA | 1 cut(s) | 1323 |
| Bsp1286I | GDGCHC | 2 cut(s) | 188, 912 |
| Bsp13I | TCCGGA | 1 cut(s) | 323 |
| Bsp143I | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| BspACI | CCGC | 3 cut(s) | 110, 362, 628 |
| BspCNI | CTCAG | 5 cut(s) | 247, 304, 364, 837, 1456 |
| BspDI | ATCGAT | 1 cut(s) | 942 |
| BspEI | TCCGGA | 1 cut(s) | 323 |
| BspHI | TCATGA | 1 cut(s) | 1354 |
| BspLI | GGNNCC | 2 cut(s) | 6, 261 |
| BspPI | GGATC | 3 cut(s) | 732, 737, 1412 |
| BspQI | GCTCTTC | 1 cut(s) | 1516 |
| BspT104I | TTCGAA | 1 cut(s) | 1323 |
| BsrDI | GCAATG | 1 cut(s) | 1063 |
| BsrI | ACTGG | 3 cut(s) | 443, 835, 845 |
| BssECI | CCNNGG | 1 cut(s) | 876 |
| BssMI | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| BssT1I | CCWWGG | 1 cut(s) | 876 |
| Bst4CI | ACNGT | 6 cut(s) | 41, 137, 907, 1201, 1212, 1245 |
| Bst6I | CTCTTC | 3 cut(s) | 641, 666, 1516 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1049, 1551 |
| BstBI | TTCGAA | 1 cut(s) | 1323 |
| BstC8I | GCNNGC | 3 cut(s) | 537, 1054, 1562 |
| BstDEI | CTNAG | 5 cut(s) | 255, 312, 351, 824, 1443 |
| BstF5I | GGATG | 3 cut(s) | 162, 199, 486 |
| BstH2I | RGCGCY | 1 cut(s) | 472 |
| BstHHI | GCGC | 2 cut(s) | 471, 660 |
| BstKTI | GATC | 4 cut(s) | 550, 740, 745, 1420 |
| BstMAI | GTCTC | 6 cut(s) | 354, 668, 896, 1056, 1245, 1343 |
| BstMBI | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1049, 1551 |
| BstNSI | RCATGY | 1 cut(s) | 887 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1210 |
| BstSFI | CTRYAG | 3 cut(s) | 40, 242, 1200 |
| BstSLI | GKGCMC | 2 cut(s) | 188, 912 |
| BstV1I | GCAGC | 4 cut(s) | 94, 249, 458, 1310 |
| BstX2I | RGATCY | 1 cut(s) | 737 |
| BstYI | RGATCY | 1 cut(s) | 737 |
| Bsu15I | ATCGAT | 1 cut(s) | 942 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1443 |
| BsuTUI | ATCGAT | 1 cut(s) | 942 |
| BtsCI | GGATG | 3 cut(s) | 162, 199, 486 |
| BtsI | GCAGTG | 1 cut(s) | 1155 |
| BtsIMutI | CAGTG | 6 cut(s) | 309, 436, 612, 828, 1155, 1197 |
| Cac8I | GCNNGC | 3 cut(s) | 537, 1054, 1562 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1415 |
| CciI | TCATGA | 1 cut(s) | 1354 |
| CfoI | GCGC | 2 cut(s) | 471, 660 |
| Cfr13I | GGNCC | 2 cut(s) | 259, 1388 |
| ClaI | ATCGAT | 1 cut(s) | 942 |
| CseI | GACGC | 1 cut(s) | 1022 |
| Csp6I | GTAC | 3 cut(s) | 753, 1004, 1114 |
| CviAII | CATG | 4 cut(s) | 127, 884, 1355, 1467 |
| CviQI | GTAC | 3 cut(s) | 753, 1004, 1114 |
| DdeI | CTNAG | 5 cut(s) | 255, 312, 351, 824, 1443 |
| DpnI | GATC | 4 cut(s) | 549, 739, 744, 1419 |
| DpnII | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| DriI | GACNNNNNGTC | 1 cut(s) | 301 |
| Eam1104I | CTCTTC | 3 cut(s) | 641, 666, 1516 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 301 |
| EarI | CTCTTC | 3 cut(s) | 641, 666, 1516 |
| Eco130I | CCWWGG | 1 cut(s) | 876 |
| Eco47I | GGWCC | 2 cut(s) | 259, 1388 |
| Eco57I | CTGAAG | 2 cut(s) | 1323, 1461 |
| Eco81I | CCTNAGG | 1 cut(s) | 1443 |
| Eco88I | CYCGRG | 2 cut(s) | 915, 1555 |
| EcoO109I | RGGNCCY | 2 cut(s) | 259, 1388 |
| EcoT14I | CCWWGG | 1 cut(s) | 876 |
| EcoT22I | ATGCAT | 2 cut(s) | 394, 1435 |
| ErhI | CCWWGG | 1 cut(s) | 876 |
| FaeI | CATG | 4 cut(s) | 130, 887, 1358, 1470 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 54, 86 |
| FaqI | GGGAC | 1 cut(s) | 458 |
| FatI | CATG | 4 cut(s) | 126, 883, 1354, 1466 |
| FblI | GTMKAC | 1 cut(s) | 43 |
| Fnu4HI | GCNGC | 5 cut(s) | 108, 238, 472, 628, 1299 |
| FokI | GGATG | 3 cut(s) | 169, 206, 493 |
| Fsp4HI | GCNGC | 5 cut(s) | 108, 238, 472, 628, 1299 |
| FspBI | CTAG | 3 cut(s) | 618, 1460, 1494 |
| GlaI | GCGC | 2 cut(s) | 470, 659 |
| GluI | GCNGC | 5 cut(s) | 108, 238, 472, 628, 1299 |
| GsuI | CTGGAG | 2 cut(s) | 460, 1098 |
| HaeII | RGCGCY | 1 cut(s) | 472 |
| HapII | CCGG | 1 cut(s) | 324 |
| HgaI | GACGC | 1 cut(s) | 1022 |
| HhaI | GCGC | 2 cut(s) | 471, 660 |
| Hin1II | CATG | 4 cut(s) | 130, 887, 1358, 1470 |
| Hin6I | GCGC | 2 cut(s) | 469, 658 |
| HinP1I | GCGC | 2 cut(s) | 469, 658 |
| HinfI | GANTC | 6 cut(s) | 506, 934, 1253, 1285, 1351, 1463 |
| HpaII | CCGG | 1 cut(s) | 324 |
| HphI | GGTGA | 3 cut(s) | 845, 878, 1219 |
| Hpy166II | GTNNAC | 5 cut(s) | 44, 186, 199, 910, 922 |
| Hpy8I | GTNNAC | 5 cut(s) | 44, 186, 199, 910, 922 |
| HpyAV | CCTTC | 5 cut(s) | 329, 1007, 1240, 1298, 1379 |
| HpyCH4III | ACNGT | 6 cut(s) | 41, 137, 907, 1201, 1212, 1245 |
| HpyCH4IV | ACGT | 1 cut(s) | 201 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1049, 1551 |
| HpyF3I | CTNAG | 5 cut(s) | 255, 312, 351, 824, 1443 |
| HpySE526I | ACGT | 1 cut(s) | 201 |
| Hsp92II | CATG | 4 cut(s) | 130, 887, 1358, 1470 |
| HspAI | GCGC | 2 cut(s) | 469, 658 |
| Kpn2I | TCCGGA | 1 cut(s) | 323 |
| Kzo9I | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| LguI | GCTCTTC | 1 cut(s) | 1516 |
| LmnI | GCTCC | 6 cut(s) | 10, 880, 1021, 1079, 1447, 1542 |
| Lsp1109I | GCAGC | 4 cut(s) | 94, 249, 458, 1310 |
| LweI | GCATC | 6 cut(s) | 256, 379, 386, 698, 1420, 1442 |
| MaeI | CTAG | 3 cut(s) | 618, 1460, 1494 |
| MaeII | ACGT | 1 cut(s) | 201 |
| MaeIII | GTNAC | 3 cut(s) | 699, 1010, 1225 |
| MalI | GATC | 4 cut(s) | 549, 739, 744, 1419 |
| MboI | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| MflI | RGATCY | 1 cut(s) | 737 |
| MhlI | GDGCHC | 2 cut(s) | 188, 912 |
| MlyI | GAGTC | 2 cut(s) | 1247, 1345 |
| MmeI | TCCRAC | 2 cut(s) | 1043, 1421 |
| Mph1103I | ATGCAT | 2 cut(s) | 394, 1435 |
| MroI | TCCGGA | 1 cut(s) | 323 |
| MroXI | GAANNNNTTC | 1 cut(s) | 559 |
| MseI | TTAA | 3 cut(s) | 495, 518, 992 |
| MslI | CAYNNNNRTG | 2 cut(s) | 155, 708 |
| MspA1I | CMGCKG | 1 cut(s) | 1301 |
| MspI | CCGG | 1 cut(s) | 324 |
| Mva1269I | GAATGC | 2 cut(s) | 221, 967 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1049, 1551 |
| NdeII | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| NlaIII | CATG | 4 cut(s) | 130, 887, 1358, 1470 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 261 |
| NmeAIII | GCCGAG | 1 cut(s) | 83 |
| NmuCI | GTSAC | 3 cut(s) | 699, 1010, 1225 |
| NsiI | ATGCAT | 2 cut(s) | 394, 1435 |
| NspI | RCATGY | 1 cut(s) | 887 |
| NspV | TTCGAA | 1 cut(s) | 1323 |
| PagI | TCATGA | 1 cut(s) | 1354 |
| PciSI | GCTCTTC | 1 cut(s) | 1516 |
| PctI | GAATGC | 2 cut(s) | 221, 967 |
| PdmI | GAANNNNTTC | 1 cut(s) | 559 |
| PfeI | GAWTC | 4 cut(s) | 506, 934, 1285, 1463 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1247 |
| PkrI | GCNGC | 5 cut(s) | 109, 239, 473, 629, 1300 |
| PleI | GAGTC | 2 cut(s) | 1247, 1345 |
| PpsI | GAGTC | 2 cut(s) | 1247, 1345 |
| PpuMI | RGGWCCY | 2 cut(s) | 259, 1388 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1210 |
| Psp5II | RGGWCCY | 2 cut(s) | 259, 1388 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 261 |
| PspPI | GGNCC | 2 cut(s) | 259, 1388 |
| PspPPI | RGGWCCY | 2 cut(s) | 259, 1388 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1415 |
| PsuI | RGATCY | 1 cut(s) | 737 |
| PvuII | CAGCTG | 1 cut(s) | 1301 |
| RsaI | GTAC | 3 cut(s) | 754, 1005, 1115 |
| RsaNI | GTAC | 3 cut(s) | 753, 1004, 1114 |
| RseI | CAYNNNNRTG | 2 cut(s) | 155, 708 |
| SapI | GCTCTTC | 1 cut(s) | 1516 |
| SaqAI | TTAA | 3 cut(s) | 495, 518, 992 |
| SatI | GCNGC | 5 cut(s) | 108, 238, 472, 628, 1299 |
| Sau3AI | GATC | 4 cut(s) | 547, 737, 742, 1417 |
| Sau96I | GGNCC | 2 cut(s) | 259, 1388 |
| ScaI | AGTACT | 1 cut(s) | 754 |
| SchI | GAGTC | 2 cut(s) | 1247, 1345 |
| SduI | GDGCHC | 2 cut(s) | 188, 912 |
| SfaNI | GCATC | 6 cut(s) | 256, 379, 386, 698, 1420, 1442 |
| SfcI | CTRYAG | 3 cut(s) | 40, 242, 1200 |
| SfuI | TTCGAA | 1 cut(s) | 1323 |
| SinI | GGWCC | 2 cut(s) | 259, 1388 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 155, 708 |
| SmlI | CTYRAG | 1 cut(s) | 1255 |
| SmoI | CTYRAG | 1 cut(s) | 1255 |
| SsiI | CCGC | 3 cut(s) | 110, 362, 628 |
| SspI | AATATT | 2 cut(s) | 278, 524 |
| SspMI | CTAG | 3 cut(s) | 618, 1460, 1494 |
| StyI | CCWWGG | 1 cut(s) | 876 |
| TaaI | ACNGT | 6 cut(s) | 41, 137, 907, 1201, 1212, 1245 |
| TaiI | ACGT | 1 cut(s) | 204 |
| TaqI | TCGA | 2 cut(s) | 942, 1323 |
| TatI | WGTACW | 2 cut(s) | 752, 1113 |
| TauI | GCSGC | 1 cut(s) | 630 |
| TfiI | GAWTC | 4 cut(s) | 506, 934, 1285, 1463 |
| Tru1I | TTAA | 3 cut(s) | 495, 518, 992 |
| Tru9I | TTAA | 3 cut(s) | 495, 518, 992 |
| TscAI | CASTG | 6 cut(s) | 316, 443, 612, 835, 1155, 1204 |
| TseFI | GTSAC | 3 cut(s) | 699, 1010, 1225 |
| TseI | GCWGC | 4 cut(s) | 107, 237, 471, 1298 |
| Tsp45I | GTSAC | 3 cut(s) | 699, 1010, 1225 |
| TspDTI | ATGAA | 5 cut(s) | 143, 173, 659, 783, 944 |
| TspGWI | ACGGA | 2 cut(s) | 38, 1410 |
| TspRI | CASTG | 6 cut(s) | 316, 443, 612, 835, 1155, 1204 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1247 |
| VneI | GTGCAC | 2 cut(s) | 184, 908 |
| VpaK11BI | GGWCC | 2 cut(s) | 259, 1388 |
| XapI | RAATTY | 5 cut(s) | 316, 590, 770, 988, 1486 |
| XbaI | TCTAGA | 1 cut(s) | 1459 |
| XceI | RCATGY | 1 cut(s) | 887 |
| XmiI | GTMKAC | 1 cut(s) | 43 |
| XmnI | GAANNNNTTC | 1 cut(s) | 559 |
| XspI | CTAG | 3 cut(s) | 618, 1460, 1494 |
| ZrmI | AGTACT | 1 cut(s) | 754 |
| Zsp2I | ATGCAT | 2 cut(s) | 394, 1435 |