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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G59670 |
| fragaria_vesca | FvH4_5g30050 |
| malus_domestica | MD04G1049200.v1.1 MD17G1177900.v1.1 |
| prunus_persica | Prupe.1G207400_v2.0.a1 Prupe.1G207400_v2.0.a1 |
| pyrus_communis | pycom04g04340 pycom17g18680 pycom17g18690 |
| rosa_chinensis | RchiOBHm_Chr7g0224241 |
| rosa_laevigata | RLG00000001911 |
| rosa_multiflora | Rmu_sc0008008.1_g000002 Rmu_sc0023501.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00235030 |
| rosa_rugosa | Rorug07G0221600 |
| rosa_samantha | Rh7AG366500 Rh7BG330000 Rh7BG357500 Rh7CG384800 Rh7DG360400 |
| rosa_wichuraiana | Rw7G030990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 1378, 1472 |
| AccBSI | CCGCTC | 1 cut(s) | 1474 |
| AccI | GTMKAC | 1 cut(s) | 162 |
| AccII | CGCG | 1 cut(s) | 1275 |
| AciI | CCGC | 3 cut(s) | 589, 1034, 1474 |
| AclWI | GGATC | 4 cut(s) | 206, 693, 698, 1092 |
| AcsI | RAATTY | 3 cut(s) | 551, 946, 1441 |
| AcuI | CTGAAG | 2 cut(s) | 1035, 1281 |
| AfaI | GTAC | 6 cut(s) | 202, 361, 541, 787, 815, 963 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1016, 1205 |
| AflIII | ACRYGT | 1 cut(s) | 1060 |
| AgsI | TTSAA | 8 cut(s) | 74, 237, 368, 464, 561, 632, 689, 1151 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 715 |
| AjiI | CACGTC | 1 cut(s) | 717 |
| AjnI | CCWGG | 2 cut(s) | 371, 1009 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 109, 141 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1119, 1151, 1468, 1500 |
| AluBI | AGCT | 6 cut(s) | 37, 405, 602, 984, 1040, 1055 |
| AluI | AGCT | 6 cut(s) | 37, 405, 602, 984, 1040, 1055 |
| Alw21I | GWGCWC | 2 cut(s) | 185, 870 |
| Alw26I | GTCTC | 5 cut(s) | 483, 854, 1011, 1114, 1203 |
| Alw44I | GTGCAC | 2 cut(s) | 181, 866 |
| AlwI | GGATC | 4 cut(s) | 206, 693, 698, 1092 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1370 |
| ApaLI | GTGCAC | 2 cut(s) | 181, 866 |
| ApeKI | GCWGC | 3 cut(s) | 429, 923, 1256 |
| ApoI | RAATTY | 3 cut(s) | 551, 946, 1441 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 42, 74 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 106 |
| AspLEI | GCGC | 3 cut(s) | 429, 1275, 1277 |
| AsuHPI | GGTGA | 4 cut(s) | 308, 803, 836, 919 |
| AxyI | CCTNAGG | 1 cut(s) | 1398 |
| BaeGI | GKGCMC | 2 cut(s) | 185, 870 |
| BanII | GRGCYC | 1 cut(s) | 1521 |
| BbsI | GAAGAC | 1 cut(s) | 639 |
| Bbv12I | GWGCWC | 2 cut(s) | 185, 870 |
| BbvI | GCAGC | 3 cut(s) | 416, 910, 1243 |
| BccI | CCATC | 4 cut(s) | 433, 815, 1200, 1384 |
| BceAI | ACGGC | 1 cut(s) | 1328 |
| BciT130I | CCWGG | 2 cut(s) | 373, 1011 |
| BclI | TGATCA | 1 cut(s) | 1287 |
| BcoDI | GTCTC | 5 cut(s) | 483, 854, 1011, 1114, 1203 |
| BfaI | CTAG | 3 cut(s) | 927, 1415, 1449 |
| BfoI | RGCGCY | 1 cut(s) | 430 |
| BfuAI | ACCTGC | 2 cut(s) | 1378, 1472 |
| BisI | GCNGC | 3 cut(s) | 430, 924, 1257 |
| BlsI | GCNGC | 3 cut(s) | 431, 925, 1258 |
| BmcAI | AGTACT | 1 cut(s) | 202 |
| Bme1390I | CCNGG | 2 cut(s) | 373, 1011 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 715 |
| BmgBI | CACGTC | 1 cut(s) | 717 |
| BmiI | GGNNCC | 2 cut(s) | 6, 153 |
| BmrFI | CCNGG | 2 cut(s) | 373, 1011 |
| BmrI | ACTGGG | 1 cut(s) | 808 |
| BmsI | GCATC | 5 cut(s) | 140, 208, 337, 659, 961 |
| BmuI | ACTGGG | 1 cut(s) | 808 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1168 |
| BpiI | GAAGAC | 1 cut(s) | 639 |
| BpmI | CTGGAG | 2 cut(s) | 138, 418 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1510 |
| BpuEI | CTTGAG | 2 cut(s) | 1096, 1198 |
| BsaI | GGTCTC | 1 cut(s) | 483 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1016, 1205 |
| Bse118I | RCCGGY | 1 cut(s) | 248 |
| Bse1I | ACTGG | 4 cut(s) | 155, 401, 793, 803 |
| Bse21I | CCTNAGG | 1 cut(s) | 1398 |
| Bse3DI | GCAATG | 3 cut(s) | 566, 720, 1021 |
| BseBI | CCWGG | 2 cut(s) | 373, 1011 |
| BseGI | GGATG | 2 cut(s) | 232, 444 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1016, 1205 |
| BseMI | GCAATG | 3 cut(s) | 566, 720, 1021 |
| BseMII | CTCAG | 3 cut(s) | 218, 1412, 1524 |
| BseNI | ACTGG | 4 cut(s) | 155, 401, 793, 803 |
| BsePI | GCGCGC | 1 cut(s) | 1273 |
| BseRI | GAGGAG | 2 cut(s) | 415, 625 |
| BseSI | GKGCMC | 2 cut(s) | 185, 870 |
| BseXI | GCAGC | 3 cut(s) | 416, 910, 1243 |
| BsgI | GTGCAG | 2 cut(s) | 323, 972 |
| Bsh1236I | CGCG | 1 cut(s) | 1275 |
| BsiHKAI | GWGCWC | 2 cut(s) | 185, 870 |
| BsiSI | CCGG | 1 cut(s) | 249 |
| BslFI | GGGAC | 1 cut(s) | 1176 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1016, 1205 |
| BsmAI | GTCTC | 5 cut(s) | 483, 854, 1011, 1114, 1203 |
| BsmFI | GGGAC | 1 cut(s) | 1176 |
| BsmI | GAATGC | 1 cut(s) | 803 |
| Bso31I | GGTCTC | 1 cut(s) | 483 |
| Bsp1286I | GDGCHC | 3 cut(s) | 185, 870, 1521 |
| Bsp143I | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| BspACI | CCGC | 3 cut(s) | 589, 1034, 1474 |
| BspCNI | CTCAG | 3 cut(s) | 217, 1411, 1523 |
| BspFNI | CGCG | 1 cut(s) | 1275 |
| BspLI | GGNNCC | 2 cut(s) | 6, 153 |
| BspMI | ACCTGC | 2 cut(s) | 1378, 1472 |
| BspPI | GGATC | 4 cut(s) | 206, 693, 698, 1092 |
| BspTNI | GGTCTC | 1 cut(s) | 483 |
| BsrBI | CCGCTC | 1 cut(s) | 1474 |
| BsrDI | GCAATG | 3 cut(s) | 566, 720, 1021 |
| BsrFI | RCCGGY | 1 cut(s) | 248 |
| BsrI | ACTGG | 4 cut(s) | 155, 401, 793, 803 |
| BssAI | RCCGGY | 1 cut(s) | 248 |
| BssHII | GCGCGC | 1 cut(s) | 1273 |
| BssMI | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| Bst2UI | CCWGG | 2 cut(s) | 373, 1011 |
| Bst4CI | ACNGT | 6 cut(s) | 200, 865, 1135, 1159, 1170, 1203 |
| Bst6I | CTCTTC | 1 cut(s) | 602 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1388, 1506 |
| BstC8I | GCNNGC | 3 cut(s) | 250, 1275, 1517 |
| BstDEI | CTNAG | 3 cut(s) | 204, 1398, 1510 |
| BstF5I | GGATG | 2 cut(s) | 232, 444 |
| BstFNI | CGCG | 1 cut(s) | 1275 |
| BstH2I | RGCGCY | 1 cut(s) | 430 |
| BstHHI | GCGC | 3 cut(s) | 429, 1275, 1277 |
| BstKTI | GATC | 5 cut(s) | 214, 701, 706, 1087, 1290 |
| BstMAI | GTCTC | 5 cut(s) | 483, 854, 1011, 1114, 1203 |
| BstMBI | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1262, 1379, 1388, 1471, 1506 |
| BstNI | CCWGG | 2 cut(s) | 373, 1011 |
| BstNSI | RCATGY | 2 cut(s) | 845, 1064 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1168 |
| BstSCI | CCNGG | 2 cut(s) | 371, 1009 |
| BstSLI | GKGCMC | 2 cut(s) | 185, 870 |
| BstUI | CGCG | 1 cut(s) | 1275 |
| BstV1I | GCAGC | 3 cut(s) | 416, 910, 1243 |
| BstV2I | GAAGAC | 1 cut(s) | 639 |
| BstX2I | RGATCY | 2 cut(s) | 698, 1084 |
| BstYI | RGATCY | 2 cut(s) | 698, 1084 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1398 |
| BtrI | CACGTC | 1 cut(s) | 717 |
| BtsCI | GGATG | 2 cut(s) | 232, 444 |
| BtsIMutI | CAGTG | 6 cut(s) | 185, 264, 394, 870, 1131, 1155 |
| BveI | ACCTGC | 2 cut(s) | 1378, 1472 |
| Cac8I | GCNNGC | 3 cut(s) | 250, 1275, 1517 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1370 |
| CfoI | GCGC | 3 cut(s) | 429, 1275, 1277 |
| Cfr10I | RCCGGY | 1 cut(s) | 248 |
| Csp6I | GTAC | 6 cut(s) | 201, 360, 540, 786, 814, 962 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1101, 1136 |
| CviAII | CATG | 5 cut(s) | 22, 148, 842, 1061, 1422 |
| CviQI | GTAC | 6 cut(s) | 201, 360, 540, 786, 814, 962 |
| DdeI | CTNAG | 3 cut(s) | 204, 1398, 1510 |
| DpnI | GATC | 5 cut(s) | 213, 700, 705, 1086, 1289 |
| DpnII | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| DriI | GACNNNNNGTC | 1 cut(s) | 715 |
| Eam1104I | CTCTTC | 1 cut(s) | 602 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 715 |
| EarI | CTCTTC | 1 cut(s) | 602 |
| Eco24I | GRGCYC | 1 cut(s) | 1521 |
| Eco31I | GGTCTC | 1 cut(s) | 483 |
| Eco32I | GATATC | 1 cut(s) | 97 |
| Eco57I | CTGAAG | 2 cut(s) | 1035, 1281 |
| Eco81I | CCTNAGG | 1 cut(s) | 1398 |
| EcoRII | CCWGG | 2 cut(s) | 371, 1009 |
| EcoRV | GATATC | 1 cut(s) | 97 |
| EcoT22I | ATGCAT | 1 cut(s) | 352 |
| EcoT38I | GRGCYC | 1 cut(s) | 1521 |
| FaeI | CATG | 5 cut(s) | 25, 151, 845, 1064, 1425 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 60, 92 |
| FaqI | GGGAC | 1 cut(s) | 1176 |
| FatI | CATG | 5 cut(s) | 21, 147, 841, 1060, 1421 |
| FauI | CCCGC | 1 cut(s) | 1027 |
| FauNDI | CATATG | 1 cut(s) | 505 |
| FbaI | TGATCA | 1 cut(s) | 1287 |
| FblI | GTMKAC | 1 cut(s) | 162 |
| Fnu4HI | GCNGC | 3 cut(s) | 430, 924, 1257 |
| FokI | GGATG | 2 cut(s) | 239, 451 |
| FriOI | GRGCYC | 1 cut(s) | 1521 |
| Fsp4HI | GCNGC | 3 cut(s) | 430, 924, 1257 |
| FspBI | CTAG | 3 cut(s) | 927, 1415, 1449 |
| GlaI | GCGC | 3 cut(s) | 428, 1274, 1276 |
| GluI | GCNGC | 3 cut(s) | 430, 924, 1257 |
| GsuI | CTGGAG | 2 cut(s) | 138, 418 |
| HaeII | RGCGCY | 1 cut(s) | 430 |
| HapII | CCGG | 1 cut(s) | 249 |
| HhaI | GCGC | 3 cut(s) | 429, 1275, 1277 |
| Hin1II | CATG | 5 cut(s) | 25, 151, 845, 1064, 1425 |
| Hin6I | GCGC | 3 cut(s) | 427, 1273, 1275 |
| HinP1I | GCGC | 3 cut(s) | 427, 1273, 1275 |
| HincII | GTYRAC | 5 cut(s) | 61, 163, 387, 584, 1180 |
| HindII | GTYRAC | 5 cut(s) | 61, 163, 387, 584, 1180 |
| HinfI | GANTC | 5 cut(s) | 450, 528, 1128, 1211, 1418 |
| HpaII | CCGG | 1 cut(s) | 249 |
| HphI | GGTGA | 4 cut(s) | 308, 803, 836, 919 |
| Hpy166II | GTNNAC | 8 cut(s) | 61, 163, 183, 387, 584, 868, 880, 1180 |
| Hpy188I | TCNGA | 7 cut(s) | 101, 136, 262, 703, 1208, 1366, 1435 |
| Hpy8I | GTNNAC | 8 cut(s) | 61, 163, 183, 387, 584, 868, 880, 1180 |
| Hpy99I | CGWCG | 1 cut(s) | 164 |
| HpyAV | CCTTC | 4 cut(s) | 96, 287, 503, 1198 |
| HpyCH4III | ACNGT | 6 cut(s) | 200, 865, 1135, 1159, 1170, 1203 |
| HpyCH4IV | ACGT | 5 cut(s) | 257, 412, 538, 716, 1182 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1262, 1379, 1388, 1471, 1506 |
| HpyF3I | CTNAG | 3 cut(s) | 204, 1398, 1510 |
| HpySE526I | ACGT | 5 cut(s) | 257, 412, 538, 716, 1182 |
| Hsp92II | CATG | 5 cut(s) | 25, 151, 845, 1064, 1425 |
| HspAI | GCGC | 3 cut(s) | 427, 1273, 1275 |
| KroI | GCCGGC | 1 cut(s) | 248 |
| KroNI | GCCGGC | 1 cut(s) | 250 |
| Ksp22I | TGATCA | 1 cut(s) | 1287 |
| Kzo9I | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| LmnI | GCTCC | 9 cut(s) | 10, 42, 157, 402, 838, 1037, 1378, 1471, 1497 |
| Lsp1109I | GCAGC | 3 cut(s) | 416, 910, 1243 |
| LweI | GCATC | 5 cut(s) | 140, 208, 337, 659, 961 |
| MaeI | CTAG | 3 cut(s) | 927, 1415, 1449 |
| MaeII | ACGT | 5 cut(s) | 257, 412, 538, 716, 1182 |
| MaeIII | GTNAC | 3 cut(s) | 306, 824, 1183 |
| MalI | GATC | 5 cut(s) | 213, 700, 705, 1086, 1289 |
| MbiI | CCGCTC | 1 cut(s) | 1474 |
| MboI | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| MboII | GAAGA | 9 cut(s) | 302, 330, 388, 391, 560, 619, 644, 927, 1232 |
| MflI | RGATCY | 2 cut(s) | 698, 1084 |
| MhlI | GDGCHC | 3 cut(s) | 185, 870, 1521 |
| MluCI | AATT | 9 cut(s) | 174, 271, 443, 459, 551, 855, 946, 1146, 1441 |
| MlyI | GAGTC | 2 cut(s) | 1205, 1427 |
| MmeI | TCCRAC | 2 cut(s) | 285, 1376 |
| Mph1103I | ATGCAT | 1 cut(s) | 352 |
| MroNI | GCCGGC | 1 cut(s) | 248 |
| MroXI | GAANNNNTTC | 1 cut(s) | 106 |
| MseI | TTAA | 2 cut(s) | 735, 887 |
| MspI | CCGG | 1 cut(s) | 249 |
| MspR9I | CCNGG | 2 cut(s) | 373, 1011 |
| Mva1269I | GAATGC | 1 cut(s) | 803 |
| MvaI | CCWGG | 2 cut(s) | 373, 1011 |
| MvnI | CGCG | 1 cut(s) | 1275 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1262, 1379, 1388, 1471, 1506 |
| NaeI | GCCGGC | 1 cut(s) | 250 |
| NdeI | CATATG | 1 cut(s) | 505 |
| NdeII | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| NgoMIV | GCCGGC | 1 cut(s) | 248 |
| NlaIII | CATG | 5 cut(s) | 25, 151, 845, 1064, 1425 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 153 |
| NmuCI | GTSAC | 2 cut(s) | 306, 824 |
| NsiI | ATGCAT | 1 cut(s) | 352 |
| NspI | RCATGY | 2 cut(s) | 845, 1064 |
| PauI | GCGCGC | 1 cut(s) | 1273 |
| PciI | ACATGT | 1 cut(s) | 1060 |
| PctI | GAATGC | 1 cut(s) | 803 |
| PdiI | GCCGGC | 1 cut(s) | 250 |
| PdmI | GAANNNNTTC | 1 cut(s) | 106 |
| PfeI | GAWTC | 3 cut(s) | 450, 528, 1128 |
| PkrI | GCNGC | 3 cut(s) | 431, 925, 1258 |
| PleI | GAGTC | 2 cut(s) | 1205, 1426 |
| PpsI | GAGTC | 2 cut(s) | 1205, 1426 |
| PscI | ACATGT | 1 cut(s) | 1060 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1168 |
| Psp6I | CCWGG | 2 cut(s) | 371, 1009 |
| PspGI | CCWGG | 2 cut(s) | 371, 1009 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 153 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1370 |
| PsuI | RGATCY | 2 cut(s) | 698, 1084 |
| PteI | GCGCGC | 1 cut(s) | 1273 |
| RsaI | GTAC | 6 cut(s) | 202, 361, 541, 787, 815, 963 |
| RsaNI | GTAC | 6 cut(s) | 201, 360, 540, 786, 814, 962 |
| SalI | GTCGAC | 1 cut(s) | 161 |
| SaqAI | TTAA | 2 cut(s) | 735, 887 |
| SatI | GCNGC | 3 cut(s) | 430, 924, 1257 |
| Sau3AI | GATC | 5 cut(s) | 211, 698, 703, 1084, 1287 |
| ScaI | AGTACT | 1 cut(s) | 202 |
| SchI | GAGTC | 2 cut(s) | 1205, 1427 |
| ScrFI | CCNGG | 2 cut(s) | 373, 1011 |
| SduI | GDGCHC | 3 cut(s) | 185, 870, 1521 |
| SfaNI | GCATC | 5 cut(s) | 140, 208, 337, 659, 961 |
| SmlI | CTYRAG | 2 cut(s) | 1111, 1213 |
| SmoI | CTYRAG | 2 cut(s) | 1111, 1213 |
| Sse9I | AATT | 9 cut(s) | 174, 271, 443, 459, 551, 855, 946, 1146, 1441 |
| SsiI | CCGC | 3 cut(s) | 589, 1034, 1474 |
| SspI | AATATT | 1 cut(s) | 233 |
| SspMI | CTAG | 3 cut(s) | 927, 1415, 1449 |
| StyD4I | CCNGG | 2 cut(s) | 371, 1009 |
| TaaI | ACNGT | 6 cut(s) | 200, 865, 1135, 1159, 1170, 1203 |
| TaiI | ACGT | 5 cut(s) | 260, 415, 541, 719, 1185 |
| TaqI | TCGA | 3 cut(s) | 162, 496, 531 |
| TasI | AATT | 9 cut(s) | 174, 271, 443, 459, 551, 855, 946, 1146, 1441 |
| TatI | WGTACW | 2 cut(s) | 200, 359 |
| TfiI | GAWTC | 3 cut(s) | 450, 528, 1128 |
| Tru1I | TTAA | 2 cut(s) | 735, 887 |
| Tru9I | TTAA | 2 cut(s) | 735, 887 |
| TscAI | CASTG | 6 cut(s) | 185, 271, 401, 870, 1138, 1162 |
| TseFI | GTSAC | 2 cut(s) | 306, 824 |
| TseI | GCWGC | 3 cut(s) | 429, 923, 1256 |
| Tsp45I | GTSAC | 2 cut(s) | 306, 824 |
| TspDTI | ATGAA | 2 cut(s) | 243, 620 |
| TspGWI | ACGGA | 1 cut(s) | 239 |
| TspRI | CASTG | 6 cut(s) | 185, 271, 401, 870, 1138, 1162 |
| VneI | GTGCAC | 2 cut(s) | 181, 866 |
| XapI | RAATTY | 3 cut(s) | 551, 946, 1441 |
| XbaI | TCTAGA | 1 cut(s) | 1414 |
| XceI | RCATGY | 2 cut(s) | 845, 1064 |
| XmiI | GTMKAC | 1 cut(s) | 162 |
| XmnI | GAANNNNTTC | 1 cut(s) | 106 |
| XspI | CTAG | 3 cut(s) | 927, 1415, 1449 |
| ZrmI | AGTACT | 1 cut(s) | 202 |
| Zsp2I | ATGCAT | 1 cut(s) | 352 |