No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G59670 |
| fragaria_vesca | FvH4_5g30050 |
| malus_domestica | MD04G1049200.v1.1 MD17G1177900.v1.1 |
| prunus_persica | Prupe.1G207400_v2.0.a1 Prupe.1G207400_v2.0.a1 |
| pyrus_communis | pycom04g04340 pycom17g18680 pycom17g18690 |
| rosa_chinensis | RchiOBHm_Chr7g0224241 |
| rosa_laevigata | RLG00000001911 |
| rosa_multiflora | Rmu_sc0008008.1_g000002 Rmu_sc0023501.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00235030 |
| rosa_rugosa | Rorug07G0221600 |
| rosa_samantha | Rh7AG366500 Rh7BG330000 Rh7BG357500 Rh7CG384800 Rh7DG360400 |
| rosa_wichuraiana | Rw7G030990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1727 |
| AatII | GACGTC | 1 cut(s) | 2282 |
| Acc16I | TGCGCA | 1 cut(s) | 1986 |
| Acc36I | ACCTGC | 1 cut(s) | 1532 |
| AccB1I | GGYRCC | 2 cut(s) | 112, 2306 |
| AccI | GTMKAC | 2 cut(s) | 707, 2589 |
| AciI | CCGC | 2 cut(s) | 593, 1088 |
| AclWI | GGATC | 3 cut(s) | 2228, 2490, 2837 |
| AcoI | YGGCCR | 1 cut(s) | 2286 |
| AcuI | CTGAAG | 3 cut(s) | 507, 1670, 2787 |
| AcyI | GRCGYC | 3 cut(s) | 113, 784, 2279 |
| AdeI | CACNNNGTG | 1 cut(s) | 475 |
| AfaI | GTAC | 7 cut(s) | 277, 479, 694, 1353, 1741, 2189, 2664 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1016, 1017, 1655, 2409, 2557, 2630, 2733 |
| AflIII | ACRYGT | 1 cut(s) | 1664 |
| AgeI | ACCGGT | 2 cut(s) | 562, 1413 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1414 |
| AjiI | CACGTC | 1 cut(s) | 1667 |
| AjnI | CCWGG | 7 cut(s) | 941, 1504, 1648, 1754, 1922, 2050, 2550 |
| Alw21I | GWGCWC | 1 cut(s) | 941 |
| Alw26I | GTCTC | 5 cut(s) | 263, 408, 830, 2286, 2507 |
| Alw44I | GTGCAC | 1 cut(s) | 937 |
| AlwI | GGATC | 3 cut(s) | 2228, 2490, 2837 |
| Ama87I | CYCGRG | 2 cut(s) | 2402, 2976 |
| AoxI | GGCC | 5 cut(s) | 1718, 1870, 2210, 2225, 2286 |
| ApaLI | GTGCAC | 1 cut(s) | 937 |
| ApeKI | GCWGC | 6 cut(s) | 212, 1841, 2812, 2929, 3119, 3137 |
| AseI | ATTAAT | 2 cut(s) | 1212, 2715 |
| AsiGI | ACCGGT | 2 cut(s) | 562, 1413 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2691, 2778, 2834 |
| AspLEI | GCGC | 5 cut(s) | 115, 1878, 1987, 2272, 2817 |
| AspS9I | GGNCC | 1 cut(s) | 560 |
| AsuC2I | CCSGG | 3 cut(s) | 1825, 2403, 2404 |
| AsuHPI | GGTGA | 7 cut(s) | 341, 437, 476, 836, 1094, 1744, 2324 |
| AvaI | CYCGRG | 2 cut(s) | 2402, 2976 |
| AvaII | GGWCC | 1 cut(s) | 560 |
| BaeGI | GKGCMC | 1 cut(s) | 941 |
| BanI | GGYRCC | 2 cut(s) | 112, 2306 |
| BbsI | GAAGAC | 2 cut(s) | 1607, 1667 |
| Bbv12I | GWGCWC | 1 cut(s) | 941 |
| BbvCI | CCTCAGC | 2 cut(s) | 914, 2331 |
| BbvI | GCAGC | 6 cut(s) | 199, 1853, 2824, 2916, 3106, 3124 |
| BceAI | ACGGC | 2 cut(s) | 1028, 2681 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2066, 2100 |
| BciT130I | CCWGG | 7 cut(s) | 943, 1506, 1650, 1756, 1924, 2052, 2552 |
| BciVI | GTATCC | 2 cut(s) | 1536, 2581 |
| BclI | TGATCA | 1 cut(s) | 733 |
| BcnI | CCSGG | 3 cut(s) | 1825, 2403, 2404 |
| BcoDI | GTCTC | 5 cut(s) | 263, 408, 830, 2286, 2507 |
| BfaI | CTAG | 4 cut(s) | 27, 1133, 2015, 2346 |
| BfmI | CTRYAG | 4 cut(s) | 21, 309, 1195, 3138 |
| BfoI | RGCGCY | 3 cut(s) | 116, 1879, 2818 |
| BfuAI | ACCTGC | 1 cut(s) | 1532 |
| BfuI | GTATCC | 2 cut(s) | 1536, 2581 |
| BglII | AGATCT | 1 cut(s) | 1169 |
| BisI | GCNGC | 7 cut(s) | 213, 1088, 1842, 2813, 2930, 3120, 3138 |
| BlsI | GCNGC | 7 cut(s) | 214, 1089, 1843, 2814, 2931, 3121, 3139 |
| Bme18I | GGWCC | 1 cut(s) | 560 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1414 |
| BmeT110I | CYCGRG | 2 cut(s) | 2402, 2976 |
| BmgBI | CACGTC | 1 cut(s) | 1667 |
| BmgT120I | GGNCC | 1 cut(s) | 560 |
| BmiI | GGNNCC | 5 cut(s) | 114, 561, 2308, 2380, 2948 |
| BmsI | GCATC | 9 cut(s) | 525, 580, 902, 946, 1339, 1619, 1950, 2665, 3085 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1676 |
| BpiI | GAAGAC | 2 cut(s) | 1607, 1667 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 92, 124 |
| BpmI | CTGGAG | 3 cut(s) | 1212, 2016, 2573 |
| Bpu10I | CCTNAGC | 2 cut(s) | 914, 2331 |
| BpuEI | CTTGAG | 2 cut(s) | 1832, 3173 |
| BpuMI | CCSGG | 3 cut(s) | 1825, 2403, 2404 |
| BsaBI | GATNNNNATC | 1 cut(s) | 756 |
| BsaHI | GRCGYC | 3 cut(s) | 113, 784, 2279 |
| BsaI | GGTCTC | 1 cut(s) | 830 |
| BsaJI | CCNNGG | 5 cut(s) | 942, 1755, 1945, 2402, 2859 |
| BsaWI | WCCGGW | 2 cut(s) | 562, 1413 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1210, 1240, 1328, 1358 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1016, 1017, 1655, 2409, 2557, 2630, 2733 |
| Bse118I | RCCGGY | 4 cut(s) | 562, 1413, 1571, 2309 |
| Bse1I | ACTGG | 5 cut(s) | 960, 1103, 1229, 2222, 3222 |
| Bse3DI | GCAATG | 3 cut(s) | 733, 2295, 3027 |
| Bse8I | GATNNNNATC | 1 cut(s) | 756 |
| BseBI | CCWGG | 7 cut(s) | 943, 1506, 1650, 1756, 1924, 2052, 2552 |
| BseDI | CCNNGG | 5 cut(s) | 942, 1755, 1945, 2402, 2859 |
| BseJI | GATNNNNATC | 1 cut(s) | 756 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1016, 1017, 1655, 2409, 2557, 2630, 2733 |
| BseMI | GCAATG | 3 cut(s) | 733, 2295, 3027 |
| BseMII | CTCAG | 7 cut(s) | 576, 905, 1190, 1259, 2166, 2322, 2765 |
| BseNI | ACTGG | 5 cut(s) | 960, 1103, 1229, 2222, 3222 |
| BseRI | GAGGAG | 3 cut(s) | 426, 1725, 1778 |
| BseSI | GKGCMC | 1 cut(s) | 941 |
| BseXI | GCAGC | 6 cut(s) | 199, 1853, 2824, 2916, 3106, 3124 |
| BseYI | CCCAGC | 2 cut(s) | 3032, 3133 |
| BsgI | GTGCAG | 2 cut(s) | 905, 1560 |
| BshFI | GGCC | 5 cut(s) | 1720, 1872, 2212, 2227, 2288 |
| BshNI | GGYRCC | 2 cut(s) | 112, 2306 |
| BshTI | ACCGGT | 2 cut(s) | 562, 1413 |
| BsiHKAI | GWGCWC | 1 cut(s) | 941 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2402, 2976 |
| BsiSI | CCGG | 7 cut(s) | 563, 1414, 1572, 1824, 2285, 2310, 2403 |
| BsiWI | CGTACG | 1 cut(s) | 2662 |
| BslFI | GGGAC | 4 cut(s) | 573, 1208, 1508, 3006 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1016, 1017, 1655, 2409, 2557, 2630, 2733 |
| BsmAI | GTCTC | 5 cut(s) | 263, 408, 830, 2286, 2507 |
| BsmBI | CGTCTC | 1 cut(s) | 2286 |
| BsmFI | GGGAC | 4 cut(s) | 573, 1208, 1508, 3006 |
| BsmI | GAATGC | 1 cut(s) | 149 |
| BsnI | GGCC | 5 cut(s) | 1720, 1872, 2212, 2227, 2288 |
| Bso31I | GGTCTC | 1 cut(s) | 830 |
| BsoBI | CYCGRG | 2 cut(s) | 2402, 2976 |
| Bsp1286I | GDGCHC | 1 cut(s) | 941 |
| Bsp1407I | TGTACA | 1 cut(s) | 2187 |
| Bsp143I | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| BspACI | CCGC | 2 cut(s) | 593, 1088 |
| BspANI | GGCC | 5 cut(s) | 1720, 1872, 2212, 2227, 2288 |
| BspCNI | CTCAG | 7 cut(s) | 577, 906, 1189, 1258, 2165, 2323, 2764 |
| BspHI | TCATGA | 1 cut(s) | 1441 |
| BspLI | GGNNCC | 5 cut(s) | 114, 561, 2308, 2380, 2948 |
| BspMAI | CTGCAG | 1 cut(s) | 3142 |
| BspMI | ACCTGC | 1 cut(s) | 1532 |
| BspPI | GGATC | 3 cut(s) | 2228, 2490, 2837 |
| BspQI | GCTCTTC | 1 cut(s) | 903 |
| BspT107I | GGYRCC | 2 cut(s) | 112, 2306 |
| BspTNI | GGTCTC | 1 cut(s) | 830 |
| BsrDI | GCAATG | 3 cut(s) | 733, 2295, 3027 |
| BsrFI | RCCGGY | 4 cut(s) | 562, 1413, 1571, 2309 |
| BsrGI | TGTACA | 1 cut(s) | 2187 |
| BsrI | ACTGG | 5 cut(s) | 960, 1103, 1229, 2222, 3222 |
| BssAI | RCCGGY | 4 cut(s) | 562, 1413, 1571, 2309 |
| BssECI | CCNNGG | 5 cut(s) | 942, 1755, 1945, 2402, 2859 |
| BssMI | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| BssNI | GRCGYC | 3 cut(s) | 113, 784, 2279 |
| BssT1I | CCWWGG | 2 cut(s) | 1945, 2859 |
| Bst2UI | CCWGG | 7 cut(s) | 943, 1506, 1650, 1756, 1924, 2052, 2552 |
| Bst4CI | ACNGT | 7 cut(s) | 335, 464, 692, 705, 1222, 1489, 3059 |
| Bst6I | CTCTTC | 9 cut(s) | 393, 526, 903, 1065, 1398, 1755, 2769, 3039, 3159 |
| BstACI | GRCGYC | 3 cut(s) | 113, 784, 2279 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1317 |
| BstAUI | TGTACA | 1 cut(s) | 2187 |
| BstC8I | GCNNGC | 6 cut(s) | 17, 847, 1539, 1718, 1874, 2967 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1653, 2555, 2731 |
| BstH2I | RGCGCY | 3 cut(s) | 116, 1879, 2818 |
| BstHHI | GCGC | 5 cut(s) | 115, 1878, 1987, 2272, 2817 |
| BstKTI | GATC | 7 cut(s) | 736, 1172, 1341, 1385, 2223, 2485, 2845 |
| BstMAI | GTCTC | 5 cut(s) | 263, 408, 830, 2286, 2507 |
| BstMBI | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 919, 1317, 2015, 2306, 2327, 2351, 3143 |
| BstNI | CCWGG | 7 cut(s) | 943, 1506, 1650, 1756, 1924, 2052, 2552 |
| BstNSI | RCATGY | 3 cut(s) | 1646, 2235, 2369 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1676 |
| BstSFI | CTRYAG | 4 cut(s) | 21, 309, 1195, 3138 |
| BstSLI | GKGCMC | 1 cut(s) | 941 |
| BstV1I | GCAGC | 6 cut(s) | 199, 1853, 2824, 2916, 3106, 3124 |
| BstV2I | GAAGAC | 2 cut(s) | 1607, 1667 |
| BstX2I | RGATCY | 2 cut(s) | 1169, 2482 |
| BstYI | RGATCY | 2 cut(s) | 1169, 2482 |
| BsuI | GTATCC | 2 cut(s) | 1536, 2581 |
| BsuRI | GGCC | 5 cut(s) | 1720, 1872, 2212, 2227, 2288 |
| BtrI | CACGTC | 1 cut(s) | 1667 |
| BtsI | GCAGTG | 1 cut(s) | 2242 |
| BtsIMutI | CAGTG | 3 cut(s) | 340, 967, 2242 |
| BveI | ACCTGC | 1 cut(s) | 1532 |
| Cac8I | GCNNGC | 6 cut(s) | 17, 847, 1539, 1718, 1874, 2967 |
| CciI | TCATGA | 1 cut(s) | 1441 |
| CfoI | GCGC | 5 cut(s) | 115, 1878, 1987, 2272, 2817 |
| Cfr10I | RCCGGY | 4 cut(s) | 562, 1413, 1571, 2309 |
| Cfr13I | GGNCC | 1 cut(s) | 560 |
| Cfr9I | CCCGGG | 1 cut(s) | 2402 |
| CseI | GACGC | 1 cut(s) | 773 |
| Csp6I | GTAC | 7 cut(s) | 276, 478, 693, 1352, 1740, 2188, 2663 |
| CspAI | ACCGGT | 2 cut(s) | 562, 1413 |
| CviQI | GTAC | 7 cut(s) | 276, 478, 693, 1352, 1740, 2188, 2663 |
| DinI | GGCGCC | 1 cut(s) | 114 |
| DpnI | GATC | 7 cut(s) | 735, 1171, 1340, 1384, 2222, 2484, 2844 |
| DpnII | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| DraI | TTTAAA | 3 cut(s) | 1147, 1771, 2497 |
| DraIII | CACNNNGTG | 1 cut(s) | 475 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1414 |
| EaeI | YGGCCR | 1 cut(s) | 2286 |
| Eam1104I | CTCTTC | 9 cut(s) | 393, 526, 903, 1065, 1398, 1755, 2769, 3039, 3159 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1414 |
| EarI | CTCTTC | 9 cut(s) | 393, 526, 903, 1065, 1398, 1755, 2769, 3039, 3159 |
| Eco130I | CCWWGG | 2 cut(s) | 1945, 2859 |
| Eco147I | AGGCCT | 1 cut(s) | 2227 |
| Eco31I | GGTCTC | 1 cut(s) | 830 |
| Eco47I | GGWCC | 1 cut(s) | 560 |
| Eco57I | CTGAAG | 3 cut(s) | 507, 1670, 2787 |
| Eco88I | CYCGRG | 2 cut(s) | 2402, 2976 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1653, 2555, 2731 |
| EcoRI | GAATTC | 3 cut(s) | 796, 1578, 2466 |
| EcoRII | CCWGG | 7 cut(s) | 941, 1504, 1648, 1754, 1922, 2050, 2550 |
| EcoT14I | CCWWGG | 2 cut(s) | 1945, 2859 |
| EcoT22I | ATGCAT | 2 cut(s) | 149, 1634 |
| EgeI | GGCGCC | 1 cut(s) | 114 |
| EheI | GGCGCC | 1 cut(s) | 114 |
| ErhI | CCWWGG | 2 cut(s) | 1945, 2859 |
| Esp3I | CGTCTC | 1 cut(s) | 2286 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 505, 537, 2766, 2798 |
| FaqI | GGGAC | 4 cut(s) | 573, 1208, 1508, 3006 |
| FauNDI | CATATG | 2 cut(s) | 1251, 2103 |
| FbaI | TGATCA | 1 cut(s) | 733 |
| FblI | GTMKAC | 2 cut(s) | 707, 2589 |
| Fnu4HI | GCNGC | 7 cut(s) | 213, 1088, 1842, 2813, 2930, 3120, 3138 |
| Fsp4HI | GCNGC | 7 cut(s) | 213, 1088, 1842, 2813, 2930, 3120, 3138 |
| FspBI | CTAG | 4 cut(s) | 27, 1133, 2015, 2346 |
| FspI | TGCGCA | 1 cut(s) | 1986 |
| GlaI | GCGC | 5 cut(s) | 114, 1877, 1986, 2271, 2816 |
| GluI | GCNGC | 7 cut(s) | 213, 1088, 1842, 2813, 2930, 3120, 3138 |
| GsaI | CCCAGC | 2 cut(s) | 3036, 3137 |
| GsuI | CTGGAG | 3 cut(s) | 1212, 2016, 2573 |
| HaeII | RGCGCY | 3 cut(s) | 116, 1879, 2818 |
| HaeIII | GGCC | 5 cut(s) | 1720, 1872, 2212, 2227, 2288 |
| HapII | CCGG | 7 cut(s) | 563, 1414, 1572, 1824, 2285, 2310, 2403 |
| HgaI | GACGC | 1 cut(s) | 773 |
| HhaI | GCGC | 5 cut(s) | 115, 1878, 1987, 2272, 2817 |
| Hin1I | GRCGYC | 3 cut(s) | 113, 784, 2279 |
| Hin6I | GCGC | 5 cut(s) | 113, 1876, 1985, 2270, 2815 |
| HinP1I | GCGC | 5 cut(s) | 113, 1876, 1985, 2270, 2815 |
| HincII | GTYRAC | 1 cut(s) | 2590 |
| HindII | GTYRAC | 1 cut(s) | 2590 |
| HindIII | AAGCTT | 2 cut(s) | 920, 2007 |
| HpaII | CCGG | 7 cut(s) | 563, 1414, 1572, 1824, 2285, 2310, 2403 |
| HphI | GGTGA | 7 cut(s) | 341, 437, 476, 836, 1094, 1744, 2324 |
| Hpy166II | GTNNAC | 8 cut(s) | 58, 467, 478, 708, 939, 2240, 2371, 2590 |
| Hpy8I | GTNNAC | 8 cut(s) | 58, 467, 478, 708, 939, 2240, 2371, 2590 |
| HpyCH4III | ACNGT | 7 cut(s) | 335, 464, 692, 705, 1222, 1489, 3059 |
| HpyCH4IV | ACGT | 2 cut(s) | 1666, 2279 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 919, 1317, 2015, 2306, 2327, 2351, 3143 |
| HpySE526I | ACGT | 2 cut(s) | 1666, 2279 |
| Hsp92I | GRCGYC | 3 cut(s) | 113, 784, 2279 |
| HspAI | GCGC | 5 cut(s) | 113, 1876, 1985, 2270, 2815 |
| KasI | GGCGCC | 1 cut(s) | 112 |
| Ksp22I | TGATCA | 1 cut(s) | 733 |
| Kzo9I | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| LguI | GCTCTTC | 1 cut(s) | 903 |
| LmnI | GCTCC | 6 cut(s) | 1369, 1738, 2342, 2737, 2795, 2912 |
| Lsp1109I | GCAGC | 6 cut(s) | 199, 1853, 2824, 2916, 3106, 3124 |
| LweI | GCATC | 9 cut(s) | 525, 580, 902, 946, 1339, 1619, 1950, 2665, 3085 |
| MaeI | CTAG | 4 cut(s) | 27, 1133, 2015, 2346 |
| MaeII | ACGT | 2 cut(s) | 1666, 2279 |
| MaeIII | GTNAC | 8 cut(s) | 329, 699, 824, 1240, 1955, 2442, 2888, 2938 |
| MalI | GATC | 7 cut(s) | 735, 1171, 1340, 1384, 2222, 2484, 2844 |
| MboI | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| MfeI | CAATTG | 2 cut(s) | 676, 2358 |
| MflI | RGATCY | 2 cut(s) | 1169, 2482 |
| MhlI | GDGCHC | 1 cut(s) | 941 |
| Mly113I | GGCGCC | 1 cut(s) | 113 |
| MlyI | GAGTC | 4 cut(s) | 410, 1439, 1570, 2107 |
| MmeI | TCCRAC | 2 cut(s) | 238, 2890 |
| Mph1103I | ATGCAT | 2 cut(s) | 149, 1634 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2691, 2778, 2834 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1473, 1479, 1536 |
| MspA1I | CMGCKG | 1 cut(s) | 3137 |
| MspI | CCGG | 7 cut(s) | 563, 1414, 1572, 1824, 2285, 2310, 2403 |
| MunI | CAATTG | 2 cut(s) | 676, 2358 |
| Mva1269I | GAATGC | 1 cut(s) | 149 |
| MvaI | CCWGG | 7 cut(s) | 943, 1506, 1650, 1756, 1924, 2052, 2552 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 919, 1317, 2015, 2306, 2327, 2351, 3143 |
| NarI | GGCGCC | 1 cut(s) | 113 |
| NciI | CCSGG | 3 cut(s) | 1825, 2403, 2404 |
| NdeI | CATATG | 2 cut(s) | 1251, 2103 |
| NdeII | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| NlaIV | GGNNCC | 5 cut(s) | 114, 561, 2308, 2380, 2948 |
| NmeAIII | GCCGAG | 2 cut(s) | 89, 461 |
| NmuCI | GTSAC | 3 cut(s) | 329, 699, 824 |
| NsbI | TGCGCA | 1 cut(s) | 1986 |
| NsiI | ATGCAT | 2 cut(s) | 149, 1634 |
| NspI | RCATGY | 3 cut(s) | 1646, 2235, 2369 |
| PagI | TCATGA | 1 cut(s) | 1441 |
| PceI | AGGCCT | 1 cut(s) | 2227 |
| PciSI | GCTCTTC | 1 cut(s) | 903 |
| PctI | GAATGC | 1 cut(s) | 149 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2691, 2778, 2834 |
| PfeI | GAWTC | 7 cut(s) | 182, 305, 440, 455, 983, 2627, 2779 |
| Pfl23II | CGTACG | 1 cut(s) | 2662 |
| PflFI | GACNNNGTC | 1 cut(s) | 1220 |
| PfoI | TCCNGGA | 2 cut(s) | 1823, 1922 |
| PinAI | ACCGGT | 2 cut(s) | 562, 1413 |
| PkrI | GCNGC | 7 cut(s) | 214, 1089, 1843, 2814, 2931, 3121, 3139 |
| PleI | GAGTC | 4 cut(s) | 410, 1439, 1569, 2106 |
| PluTI | GGCGCC | 1 cut(s) | 116 |
| PpsI | GAGTC | 4 cut(s) | 410, 1439, 1569, 2106 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1676 |
| PshBI | ATTAAT | 2 cut(s) | 1212, 2715 |
| PsiI | TTATAA | 1 cut(s) | 1727 |
| Psp6I | CCWGG | 7 cut(s) | 941, 1504, 1648, 1754, 1922, 2050, 2550 |
| PspFI | CCCAGC | 2 cut(s) | 3032, 3133 |
| PspGI | CCWGG | 7 cut(s) | 941, 1504, 1648, 1754, 1922, 2050, 2550 |
| PspLI | CGTACG | 1 cut(s) | 2662 |
| PspN4I | GGNNCC | 5 cut(s) | 114, 561, 2308, 2380, 2948 |
| PspPI | GGNCC | 1 cut(s) | 560 |
| PstI | CTGCAG | 1 cut(s) | 3142 |
| PsuI | RGATCY | 2 cut(s) | 1169, 2482 |
| PsyI | GACNNNGTC | 1 cut(s) | 1220 |
| PvuII | CAGCTG | 1 cut(s) | 3137 |
| RsaI | GTAC | 7 cut(s) | 277, 479, 694, 1353, 1741, 2189, 2664 |
| RsaNI | GTAC | 7 cut(s) | 276, 478, 693, 1352, 1740, 2188, 2663 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1473, 1479, 1536 |
| SalI | GTCGAC | 1 cut(s) | 2588 |
| SapI | GCTCTTC | 1 cut(s) | 903 |
| SatI | GCNGC | 7 cut(s) | 213, 1088, 1842, 2813, 2930, 3120, 3138 |
| Sau3AI | GATC | 7 cut(s) | 733, 1169, 1338, 1382, 2220, 2482, 2842 |
| Sau96I | GGNCC | 1 cut(s) | 560 |
| SchI | GAGTC | 4 cut(s) | 410, 1439, 1570, 2107 |
| SduI | GDGCHC | 1 cut(s) | 941 |
| SfaNI | GCATC | 9 cut(s) | 525, 580, 902, 946, 1339, 1619, 1950, 2665, 3085 |
| SfcI | CTRYAG | 4 cut(s) | 21, 309, 1195, 3138 |
| SfoI | GGCGCC | 1 cut(s) | 114 |
| SinI | GGWCC | 1 cut(s) | 560 |
| SmaI | CCCGGG | 1 cut(s) | 2404 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1473, 1479, 1536 |
| SmlI | CTYRAG | 2 cut(s) | 1847, 3188 |
| SmoI | CTYRAG | 2 cut(s) | 1847, 3188 |
| SseBI | AGGCCT | 1 cut(s) | 2227 |
| SsiI | CCGC | 2 cut(s) | 593, 1088 |
| SspDI | GGCGCC | 1 cut(s) | 112 |
| SspI | AATATT | 1 cut(s) | 2035 |
| SspMI | CTAG | 4 cut(s) | 27, 1133, 2015, 2346 |
| StuI | AGGCCT | 1 cut(s) | 2227 |
| StyI | CCWWGG | 2 cut(s) | 1945, 2859 |
| TaaI | ACNGT | 7 cut(s) | 335, 464, 692, 705, 1222, 1489, 3059 |
| TaiI | ACGT | 2 cut(s) | 1669, 2282 |
| TaqI | TCGA | 8 cut(s) | 180, 443, 986, 1785, 2086, 2417, 2589, 2958 |
| TaqII | GACCGA | 1 cut(s) | 687 |
| TatI | WGTACW | 3 cut(s) | 275, 477, 2187 |
| TauI | GCSGC | 1 cut(s) | 1090 |
| TfiI | GAWTC | 7 cut(s) | 182, 305, 440, 455, 983, 2627, 2779 |
| TscAI | CASTG | 3 cut(s) | 340, 967, 2242 |
| TseFI | GTSAC | 3 cut(s) | 329, 699, 824 |
| TseI | GCWGC | 6 cut(s) | 212, 1841, 2812, 2929, 3119, 3137 |
| Tsp45I | GTSAC | 3 cut(s) | 329, 699, 824 |
| TspGWI | ACGGA | 1 cut(s) | 1053 |
| TspMI | CCCGGG | 1 cut(s) | 2402 |
| TspRI | CASTG | 3 cut(s) | 340, 967, 2242 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1220 |
| VneI | GTGCAC | 1 cut(s) | 937 |
| VpaK11BI | GGWCC | 1 cut(s) | 560 |
| VspI | ATTAAT | 2 cut(s) | 1212, 2715 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1653, 2555, 2731 |
| XceI | RCATGY | 3 cut(s) | 1646, 2235, 2369 |
| XmaI | CCCGGG | 1 cut(s) | 2402 |
| XmiI | GTMKAC | 2 cut(s) | 707, 2589 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2691, 2778, 2834 |
| XspI | CTAG | 4 cut(s) | 27, 1133, 2015, 2346 |
| ZraI | GACGTC | 1 cut(s) | 2280 |
| Zsp2I | ATGCAT | 2 cut(s) | 149, 1634 |