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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G59670 |
| fragaria_vesca | FvH4_5g30050 |
| malus_domestica | MD04G1049200.v1.1 MD17G1177900.v1.1 |
| prunus_persica | Prupe.1G207400_v2.0.a1 Prupe.1G207400_v2.0.a1 |
| pyrus_communis | pycom04g04340 pycom17g18680 pycom17g18690 |
| rosa_chinensis | RchiOBHm_Chr7g0224241 |
| rosa_laevigata | RLG00000001911 |
| rosa_multiflora | Rmu_sc0008008.1_g000002 Rmu_sc0023501.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00235030 |
| rosa_rugosa | Rorug07G0221600 |
| rosa_samantha | Rh7AG366500 Rh7BG330000 Rh7BG357500 Rh7CG384800 Rh7DG360400 |
| rosa_wichuraiana | Rw7G030990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 16 |
| Acc36I | ACCTGC | 1 cut(s) | 16 |
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccII | CGCG | 1 cut(s) | 716 |
| AciI | CCGC | 7 cut(s) | 203, 305, 365, 472, 652, 1226, 1280 |
| AclWI | GGATC | 3 cut(s) | 735, 740, 1119 |
| AcsI | RAATTY | 5 cut(s) | 88, 328, 773, 988, 1423 |
| AcuI | CTGAAG | 3 cut(s) | 288, 950, 1077 |
| AfaI | GTAC | 2 cut(s) | 22, 1005 |
| AfeI | AGCGCT | 1 cut(s) | 537 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 371, 1013, 1146, 1355 |
| AflIII | ACRYGT | 1 cut(s) | 714 |
| AgeI | ACCGGT | 1 cut(s) | 1463 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 313 |
| AjnI | CCWGG | 1 cut(s) | 1501 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 74, 106 |
| AluBI | AGCT | 5 cut(s) | 297, 833, 928, 1026, 1182 |
| AluI | AGCT | 5 cut(s) | 297, 833, 928, 1026, 1182 |
| Alw26I | GTCTC | 3 cut(s) | 671, 896, 1056 |
| AlwI | GGATC | 3 cut(s) | 735, 740, 1119 |
| Ama87I | CYCGRG | 1 cut(s) | 531 |
| Aor51HI | AGCGCT | 1 cut(s) | 537 |
| AoxI | GGCC | 1 cut(s) | 1370 |
| ApeKI | GCWGC | 4 cut(s) | 542, 965, 1076, 1342 |
| ApoI | RAATTY | 5 cut(s) | 88, 328, 773, 988, 1423 |
| AsiGI | ACCGGT | 1 cut(s) | 1463 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 562, 1465 |
| AspLEI | GCGC | 2 cut(s) | 538, 1299 |
| AspS9I | GGNCC | 2 cut(s) | 447, 1370 |
| AsuHPI | GGTGA | 4 cut(s) | 353, 878, 961, 1076 |
| AvaI | CYCGRG | 1 cut(s) | 531 |
| AvaII | GGWCC | 1 cut(s) | 447 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 1326 |
| BbsI | GAAGAC | 1 cut(s) | 276 |
| BbvI | GCAGC | 4 cut(s) | 554, 952, 1063, 1354 |
| BccI | CCATC | 5 cut(s) | 478, 857, 1007, 1220, 1227 |
| BciT130I | CCWGG | 1 cut(s) | 1503 |
| BciVI | GTATCC | 1 cut(s) | 1166 |
| BclI | TGATCA | 1 cut(s) | 550 |
| BcoDI | GTCTC | 3 cut(s) | 671, 896, 1056 |
| BfaI | CTAG | 3 cut(s) | 95, 621, 1409 |
| BfoI | RGCGCY | 1 cut(s) | 539 |
| BfuAI | ACCTGC | 1 cut(s) | 16 |
| BfuI | GTATCC | 1 cut(s) | 1166 |
| BisI | GCNGC | 6 cut(s) | 543, 966, 1077, 1226, 1281, 1343 |
| BlsI | GCNGC | 6 cut(s) | 544, 967, 1078, 1227, 1282, 1344 |
| Bme1390I | CCNGG | 1 cut(s) | 1503 |
| Bme18I | GGWCC | 1 cut(s) | 447 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 313 |
| BmeT110I | CYCGRG | 1 cut(s) | 531 |
| BmgT120I | GGNCC | 2 cut(s) | 447, 1370 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 1503 |
| BmrI | ACTGGG | 1 cut(s) | 349 |
| BmsI | GCATC | 6 cut(s) | 159, 268, 382, 701, 942, 1198 |
| BmuI | ACTGGG | 1 cut(s) | 349 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1195 |
| BpiI | GAAGAC | 1 cut(s) | 276 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1492 |
| BpuEI | CTTGAG | 1 cut(s) | 872 |
| BsaJI | CCNNGG | 1 cut(s) | 876 |
| BsaWI | WCCGGW | 1 cut(s) | 1463 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 371, 1013, 1146, 1355 |
| Bse118I | RCCGGY | 2 cut(s) | 1052, 1463 |
| Bse1I | ACTGG | 3 cut(s) | 44, 355, 1140 |
| Bse3DI | GCAATG | 3 cut(s) | 198, 608, 1063 |
| BseBI | CCWGG | 1 cut(s) | 1503 |
| BseDI | CCNNGG | 1 cut(s) | 876 |
| BseGI | GGATG | 5 cut(s) | 162, 211, 217, 489, 1317 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 371, 1013, 1146, 1355 |
| BseMI | GCAATG | 3 cut(s) | 198, 608, 1063 |
| BseMII | CTCAG | 3 cut(s) | 315, 838, 1506 |
| BseNI | ACTGG | 3 cut(s) | 44, 355, 1140 |
| BseXI | GCAGC | 4 cut(s) | 554, 952, 1063, 1354 |
| BsgI | GTGCAG | 1 cut(s) | 893 |
| Bsh1236I | CGCG | 1 cut(s) | 716 |
| BshFI | GGCC | 1 cut(s) | 1372 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BshTI | ACCGGT | 1 cut(s) | 1463 |
| BsiHKCI | CYCGRG | 1 cut(s) | 531 |
| BsiSI | CCGG | 2 cut(s) | 1053, 1464 |
| BslFI | GGGAC | 3 cut(s) | 642, 1163, 1203 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 371, 1013, 1146, 1355 |
| BsmAI | GTCTC | 3 cut(s) | 671, 896, 1056 |
| BsmBI | CGTCTC | 1 cut(s) | 1056 |
| BsmFI | GGGAC | 3 cut(s) | 642, 1163, 1203 |
| BsmI | GAATGC | 1 cut(s) | 1043 |
| BsnI | GGCC | 1 cut(s) | 1372 |
| BsoBI | CYCGRG | 1 cut(s) | 531 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1326 |
| Bsp1407I | TGTACA | 1 cut(s) | 20 |
| Bsp143I | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| BspACI | CCGC | 7 cut(s) | 203, 305, 365, 472, 652, 1226, 1280 |
| BspANI | GGCC | 1 cut(s) | 1372 |
| BspCNI | CTCAG | 3 cut(s) | 316, 837, 1505 |
| BspFNI | CGCG | 1 cut(s) | 716 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspMI | ACCTGC | 1 cut(s) | 16 |
| BspPI | GGATC | 3 cut(s) | 735, 740, 1119 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BsrDI | GCAATG | 3 cut(s) | 198, 608, 1063 |
| BsrFI | RCCGGY | 2 cut(s) | 1052, 1463 |
| BsrGI | TGTACA | 1 cut(s) | 20 |
| BsrI | ACTGG | 3 cut(s) | 44, 355, 1140 |
| BssAI | RCCGGY | 2 cut(s) | 1052, 1463 |
| BssECI | CCNNGG | 1 cut(s) | 876 |
| BssMI | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| BssT1I | CCWWGG | 1 cut(s) | 876 |
| Bst2UI | CCWGG | 1 cut(s) | 1503 |
| Bst4CI | ACNGT | 7 cut(s) | 123, 137, 313, 803, 1154, 1197, 1396 |
| Bst6I | CTCTTC | 1 cut(s) | 669 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1049, 1488 |
| BstAUI | TGTACA | 1 cut(s) | 20 |
| BstC8I | GCNNGC | 3 cut(s) | 540, 1054, 1499 |
| BstDEI | CTNAG | 3 cut(s) | 324, 824, 1492 |
| BstF5I | GGATG | 5 cut(s) | 162, 211, 217, 489, 1317 |
| BstFNI | CGCG | 1 cut(s) | 716 |
| BstH2I | RGCGCY | 1 cut(s) | 539 |
| BstHHI | GCGC | 2 cut(s) | 538, 1299 |
| BstKTI | GATC | 4 cut(s) | 553, 743, 748, 1114 |
| BstMAI | GTCTC | 3 cut(s) | 671, 896, 1056 |
| BstMBI | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 392, 542, 1049, 1208, 1488 |
| BstNI | CCWGG | 1 cut(s) | 1503 |
| BstNSI | RCATGY | 1 cut(s) | 887 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1195 |
| BstSCI | CCNGG | 1 cut(s) | 1501 |
| BstUI | CGCG | 1 cut(s) | 716 |
| BstV1I | GCAGC | 4 cut(s) | 554, 952, 1063, 1354 |
| BstV2I | GAAGAC | 1 cut(s) | 276 |
| BstX2I | RGATCY | 2 cut(s) | 740, 1111 |
| BstYI | RGATCY | 2 cut(s) | 740, 1111 |
| BsuI | GTATCC | 1 cut(s) | 1166 |
| BsuRI | GGCC | 1 cut(s) | 1372 |
| BtsCI | GGATG | 5 cut(s) | 162, 211, 217, 489, 1317 |
| BtsI | GCAGTG | 1 cut(s) | 905 |
| BtsIMutI | CAGTG | 4 cut(s) | 309, 321, 808, 905 |
| BveI | ACCTGC | 1 cut(s) | 16 |
| Cac8I | GCNNGC | 3 cut(s) | 540, 1054, 1499 |
| CfoI | GCGC | 2 cut(s) | 538, 1299 |
| Cfr10I | RCCGGY | 2 cut(s) | 1052, 1463 |
| Cfr13I | GGNCC | 2 cut(s) | 447, 1370 |
| Csp6I | GTAC | 2 cut(s) | 21, 1004 |
| CspAI | ACCGGT | 1 cut(s) | 1463 |
| CviAII | CATG | 6 cut(s) | 18, 48, 127, 253, 884, 1404 |
| CviQI | GTAC | 2 cut(s) | 21, 1004 |
| DdeI | CTNAG | 3 cut(s) | 324, 824, 1492 |
| DpnI | GATC | 4 cut(s) | 552, 742, 747, 1113 |
| DpnII | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| DriI | GACNNNNNGTC | 1 cut(s) | 313 |
| Eam1104I | CTCTTC | 1 cut(s) | 669 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 313 |
| EarI | CTCTTC | 1 cut(s) | 669 |
| Eco130I | CCWWGG | 1 cut(s) | 876 |
| Eco24I | GRGCYC | 1 cut(s) | 1326 |
| Eco47I | GGWCC | 1 cut(s) | 447 |
| Eco47III | AGCGCT | 1 cut(s) | 537 |
| Eco57I | CTGAAG | 3 cut(s) | 288, 950, 1077 |
| Eco88I | CYCGRG | 1 cut(s) | 531 |
| EcoO109I | RGGNCCY | 2 cut(s) | 447, 1370 |
| EcoRI | GAATTC | 1 cut(s) | 88 |
| EcoRII | CCWGG | 1 cut(s) | 1501 |
| EcoT14I | CCWWGG | 1 cut(s) | 876 |
| EcoT22I | ATGCAT | 1 cut(s) | 397 |
| EcoT38I | GRGCYC | 1 cut(s) | 1326 |
| ErhI | CCWWGG | 1 cut(s) | 876 |
| Esp3I | CGTCTC | 1 cut(s) | 1056 |
| FaeI | CATG | 6 cut(s) | 21, 51, 130, 256, 887, 1407 |
| FaqI | GGGAC | 3 cut(s) | 642, 1163, 1203 |
| FatI | CATG | 6 cut(s) | 17, 47, 126, 252, 883, 1403 |
| FauNDI | CATATG | 1 cut(s) | 547 |
| FbaI | TGATCA | 1 cut(s) | 550 |
| Fnu4HI | GCNGC | 6 cut(s) | 543, 966, 1077, 1226, 1281, 1343 |
| FokI | GGATG | 5 cut(s) | 169, 218, 224, 496, 1324 |
| FriOI | GRGCYC | 1 cut(s) | 1326 |
| Fsp4HI | GCNGC | 6 cut(s) | 543, 966, 1077, 1226, 1281, 1343 |
| FspBI | CTAG | 3 cut(s) | 95, 621, 1409 |
| GlaI | GCGC | 2 cut(s) | 537, 1298 |
| GluI | GCNGC | 6 cut(s) | 543, 966, 1077, 1226, 1281, 1343 |
| HaeII | RGCGCY | 1 cut(s) | 539 |
| HaeIII | GGCC | 1 cut(s) | 1372 |
| HapII | CCGG | 2 cut(s) | 1053, 1464 |
| HhaI | GCGC | 2 cut(s) | 538, 1299 |
| Hin1II | CATG | 6 cut(s) | 21, 51, 130, 256, 887, 1407 |
| Hin6I | GCGC | 2 cut(s) | 536, 1297 |
| HinP1I | GCGC | 2 cut(s) | 536, 1297 |
| HincII | GTYRAC | 2 cut(s) | 217, 432 |
| HindII | GTYRAC | 2 cut(s) | 217, 432 |
| HinfI | GANTC | 6 cut(s) | 350, 509, 593, 1238, 1333, 1400 |
| HpaII | CCGG | 2 cut(s) | 1053, 1464 |
| HphI | GGTGA | 4 cut(s) | 353, 878, 961, 1076 |
| Hpy166II | GTNNAC | 3 cut(s) | 217, 432, 922 |
| Hpy188I | TCNGA | 6 cut(s) | 319, 745, 985, 1096, 1307, 1471 |
| Hpy188III | TCNNGA | 9 cut(s) | 154, 169, 531, 749, 851, 860, 901, 1166, 1267 |
| Hpy8I | GTNNAC | 3 cut(s) | 217, 432, 922 |
| HpyAV | CCTTC | 7 cut(s) | 250, 332, 1280, 1302, 1349, 1361, 1395 |
| HpyCH4III | ACNGT | 7 cut(s) | 123, 137, 313, 803, 1154, 1197, 1396 |
| HpyCH4IV | ACGT | 1 cut(s) | 457 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 392, 542, 1049, 1208, 1488 |
| HpyF3I | CTNAG | 3 cut(s) | 324, 824, 1492 |
| HpySE526I | ACGT | 1 cut(s) | 457 |
| Hsp92II | CATG | 6 cut(s) | 21, 51, 130, 256, 887, 1407 |
| HspAI | GCGC | 2 cut(s) | 536, 1297 |
| KroI | GCCGGC | 1 cut(s) | 1052 |
| KroNI | GCCGGC | 1 cut(s) | 1054 |
| Ksp22I | TGATCA | 1 cut(s) | 550 |
| Kzo9I | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| LmnI | GCTCC | 5 cut(s) | 302, 880, 1168, 1453, 1479 |
| Lsp1109I | GCAGC | 4 cut(s) | 554, 952, 1063, 1354 |
| LweI | GCATC | 6 cut(s) | 159, 268, 382, 701, 942, 1198 |
| MaeI | CTAG | 3 cut(s) | 95, 621, 1409 |
| MaeII | ACGT | 1 cut(s) | 457 |
| MaeIII | GTNAC | 3 cut(s) | 131, 137, 866 |
| MalI | GATC | 4 cut(s) | 552, 742, 747, 1113 |
| MboI | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| MflI | RGATCY | 2 cut(s) | 740, 1111 |
| MhlI | GDGCHC | 1 cut(s) | 1326 |
| MluI | ACGCGT | 1 cut(s) | 714 |
| MnlI | CCTC | 8 cut(s) | 106, 178, 411, 438, 648, 991, 1345, 1442 |
| Mph1103I | ATGCAT | 1 cut(s) | 397 |
| MroNI | GCCGGC | 1 cut(s) | 1052 |
| MroXI | GAANNNNTTC | 2 cut(s) | 562, 1465 |
| MseI | TTAA | 2 cut(s) | 191, 498 |
| MslI | CAYNNNNRTG | 1 cut(s) | 155 |
| MspA1I | CMGCKG | 1 cut(s) | 833 |
| MspI | CCGG | 2 cut(s) | 1053, 1464 |
| MspR9I | CCNGG | 1 cut(s) | 1503 |
| Mva1269I | GAATGC | 1 cut(s) | 1043 |
| MvaI | CCWGG | 1 cut(s) | 1503 |
| MvnI | CGCG | 1 cut(s) | 716 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 392, 542, 1049, 1208, 1488 |
| NaeI | GCCGGC | 1 cut(s) | 1054 |
| NdeI | CATATG | 1 cut(s) | 547 |
| NdeII | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| NgoMIV | GCCGGC | 1 cut(s) | 1052 |
| NlaIII | CATG | 6 cut(s) | 21, 51, 130, 256, 887, 1407 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| NmuCI | GTSAC | 2 cut(s) | 137, 866 |
| NsiI | ATGCAT | 1 cut(s) | 397 |
| NspI | RCATGY | 1 cut(s) | 887 |
| PaqCI | CACCTGC | 1 cut(s) | 16 |
| PctI | GAATGC | 1 cut(s) | 1043 |
| PdiI | GCCGGC | 1 cut(s) | 1054 |
| PdmI | GAANNNNTTC | 2 cut(s) | 562, 1465 |
| PfeI | GAWTC | 6 cut(s) | 350, 509, 593, 1238, 1333, 1400 |
| PinAI | ACCGGT | 1 cut(s) | 1463 |
| PkrI | GCNGC | 6 cut(s) | 544, 967, 1078, 1227, 1282, 1344 |
| PpuMI | RGGWCCY | 1 cut(s) | 447 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1195 |
| Psp5II | RGGWCCY | 1 cut(s) | 447 |
| Psp6I | CCWGG | 1 cut(s) | 1501 |
| PspGI | CCWGG | 1 cut(s) | 1501 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PspPI | GGNCC | 2 cut(s) | 447, 1370 |
| PspPPI | RGGWCCY | 1 cut(s) | 447 |
| PsuI | RGATCY | 2 cut(s) | 740, 1111 |
| PvuII | CAGCTG | 1 cut(s) | 833 |
| RsaI | GTAC | 2 cut(s) | 22, 1005 |
| RsaNI | GTAC | 2 cut(s) | 21, 1004 |
| RseI | CAYNNNNRTG | 1 cut(s) | 155 |
| SaqAI | TTAA | 2 cut(s) | 191, 498 |
| SatI | GCNGC | 6 cut(s) | 543, 966, 1077, 1226, 1281, 1343 |
| Sau3AI | GATC | 4 cut(s) | 550, 740, 745, 1111 |
| Sau96I | GGNCC | 2 cut(s) | 447, 1370 |
| ScrFI | CCNGG | 1 cut(s) | 1503 |
| SduI | GDGCHC | 1 cut(s) | 1326 |
| SetI | ASST | 9 cut(s) | 10, 299, 343, 452, 460, 835, 930, 1028, 1184 |
| SfaNI | GCATC | 6 cut(s) | 159, 268, 382, 701, 942, 1198 |
| SinI | GGWCC | 1 cut(s) | 447 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 155 |
| SmlI | CTYRAG | 1 cut(s) | 851 |
| SmoI | CTYRAG | 1 cut(s) | 851 |
| SsiI | CCGC | 7 cut(s) | 203, 305, 365, 472, 652, 1226, 1280 |
| SspI | AATATT | 2 cut(s) | 290, 1105 |
| SspMI | CTAG | 3 cut(s) | 95, 621, 1409 |
| StyD4I | CCNGG | 1 cut(s) | 1501 |
| StyI | CCWWGG | 1 cut(s) | 876 |
| TaaI | ACNGT | 7 cut(s) | 123, 137, 313, 803, 1154, 1197, 1396 |
| TaiI | ACGT | 1 cut(s) | 460 |
| TaqI | TCGA | 3 cut(s) | 225, 859, 900 |
| TatI | WGTACW | 1 cut(s) | 20 |
| TauI | GCSGC | 2 cut(s) | 1228, 1283 |
| TfiI | GAWTC | 6 cut(s) | 350, 509, 593, 1238, 1333, 1400 |
| Tru1I | TTAA | 2 cut(s) | 191, 498 |
| Tru9I | TTAA | 2 cut(s) | 191, 498 |
| TscAI | CASTG | 4 cut(s) | 316, 328, 808, 912 |
| TseFI | GTSAC | 2 cut(s) | 137, 866 |
| TseI | GCWGC | 4 cut(s) | 542, 965, 1076, 1342 |
| Tsp45I | GTSAC | 2 cut(s) | 137, 866 |
| TspDTI | ATGAA | 3 cut(s) | 173, 269, 1377 |
| TspGWI | ACGGA | 1 cut(s) | 1080 |
| TspRI | CASTG | 4 cut(s) | 316, 328, 808, 912 |
| VpaK11BI | GGWCC | 1 cut(s) | 447 |
| XapI | RAATTY | 5 cut(s) | 88, 328, 773, 988, 1423 |
| XceI | RCATGY | 1 cut(s) | 887 |
| XmnI | GAANNNNTTC | 2 cut(s) | 562, 1465 |
| XspI | CTAG | 3 cut(s) | 95, 621, 1409 |
| Zsp2I | ATGCAT | 1 cut(s) | 397 |