RNA polymerase II C-terminal domain phosphatase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G33540 AT2G33540 |
| fragaria_vesca | FvH4_4g22870 FvH4_4g22870 FvH4_4g22870 |
| malus_domestica | MD13G1129000.v1.1 MD16G1128700.v1.1 MD16G1128800.v1.1 |
| prunus_persica | Prupe.1G217600_v2.0.a1 |
| pyrus_communis | pycom13g11190 pycom13g11200 pycom16g10920 |
| rosa_chinensis | RchiOBHm_Chr4g0429111 RchiOBHm_Chr4g0429121 |
| rosa_laevigata | RLG00000007096 |
| rosa_multiflora | Rmu_sc0000846.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00370740 |
| rosa_rugosa | Rorug04G0233100 |
| rosa_samantha | Rh4AG289100 Rh4BG295100 Rh4CG310500 Rh4DG292000 |
| rosa_wichuraiana | Rw4G025040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1541 |
| AarI | CACCTGC | 1 cut(s) | 2080 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1203 |
| Acc36I | ACCTGC | 2 cut(s) | 2080, 2498 |
| AccB1I | GGYRCC | 1 cut(s) | 1475 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1729 |
| AccI | GTMKAC | 1 cut(s) | 3113 |
| AccII | CGCG | 2 cut(s) | 255, 2145 |
| AccIII | TCCGGA | 1 cut(s) | 2473 |
| AciI | CCGC | 9 cut(s) | 569, 1077, 2131, 2143, 2225, 2273, 2812, 3077, 3221 |
| AclI | AACGTT | 1 cut(s) | 1544 |
| AcoI | YGGCCR | 3 cut(s) | 2235, 3074, 3318 |
| AcsI | RAATTY | 5 cut(s) | 123, 412, 598, 1396, 2827 |
| AfaI | GTAC | 5 cut(s) | 25, 327, 1786, 2715, 3421 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 313, 902, 958, 1307, 1729, 2244, 2811, 2981 |
| AflII | CTTAAG | 1 cut(s) | 1916 |
| AflIII | ACRYGT | 1 cut(s) | 2321 |
| AhlI | ACTAGT | 1 cut(s) | 2422 |
| AjiI | CACGTC | 1 cut(s) | 2324 |
| AjnI | CCWGG | 8 cut(s) | 271, 901, 1445, 1569, 2241, 2815, 3438, 3520 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1279, 1311 |
| Alw21I | GWGCWC | 3 cut(s) | 351, 1522, 2161 |
| Alw26I | GTCTC | 2 cut(s) | 1434, 3181 |
| Alw44I | GTGCAC | 1 cut(s) | 1518 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 632, 854, 1745 |
| Aor13HI | TCCGGA | 1 cut(s) | 2473 |
| AoxI | GGCC | 7 cut(s) | 321, 1807, 2235, 2813, 2928, 3074, 3318 |
| ApaI | GGGCCC | 1 cut(s) | 2932 |
| ApaLI | GTGCAC | 1 cut(s) | 1518 |
| ApoI | RAATTY | 5 cut(s) | 123, 412, 598, 1396, 2827 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 38, 1197 |
| AspA2I | CCTAGG | 1 cut(s) | 61 |
| AspLEI | GCGC | 1 cut(s) | 255 |
| AsuC2I | CCSGG | 1 cut(s) | 295 |
| AsuNHI | GCTAGC | 1 cut(s) | 1274 |
| AvaII | GGWCC | 8 cut(s) | 931, 949, 1592, 1700, 2510, 2802, 3155, 3471 |
| AvrII | CCTAGG | 1 cut(s) | 61 |
| AxyI | CCTNAGG | 1 cut(s) | 2053 |
| BaeGI | GKGCMC | 2 cut(s) | 1522, 2932 |
| BamHI | GGATCC | 1 cut(s) | 2971 |
| BanI | GGYRCC | 1 cut(s) | 1475 |
| BanII | GRGCYC | 4 cut(s) | 319, 351, 2932, 3493 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2473, 2505 |
| BauI | CACGAG | 1 cut(s) | 993 |
| BbsI | GAAGAC | 2 cut(s) | 390, 1227 |
| Bbv12I | GWGCWC | 3 cut(s) | 351, 1522, 2161 |
| BceAI | ACGGC | 3 cut(s) | 308, 1328, 2139 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 548, 582, 1492, 1526 |
| BciT130I | CCWGG | 8 cut(s) | 273, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| BclI | TGATCA | 1 cut(s) | 3175 |
| BcnI | CCSGG | 1 cut(s) | 295 |
| BcoDI | GTCTC | 2 cut(s) | 1434, 3181 |
| BcuI | ACTAGT | 1 cut(s) | 2422 |
| BfmI | CTRYAG | 5 cut(s) | 549, 702, 1341, 2073, 2502 |
| BfrI | CTTAAG | 1 cut(s) | 1916 |
| BfuAI | ACCTGC | 2 cut(s) | 2080, 2498 |
| BglII | AGATCT | 2 cut(s) | 2449, 2662 |
| BlnI | CCTAGG | 1 cut(s) | 61 |
| BlpI | GCTNAGC | 1 cut(s) | 3399 |
| BmcAI | AGTACT | 1 cut(s) | 1786 |
| Bme1390I | CCNGG | 9 cut(s) | 273, 295, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| Bme18I | GGWCC | 8 cut(s) | 931, 949, 1592, 1700, 2510, 2802, 3155, 3471 |
| BmgBI | CACGTC | 1 cut(s) | 2324 |
| BmrFI | CCNGG | 9 cut(s) | 273, 295, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| BmrI | ACTGGG | 2 cut(s) | 36, 2934 |
| BmtI | GCTAGC | 1 cut(s) | 1278 |
| BmuI | ACTGGG | 2 cut(s) | 36, 2934 |
| BpiI | GAAGAC | 2 cut(s) | 390, 1227 |
| BpmI | CTGGAG | 1 cut(s) | 1592 |
| Bpu10I | CCTNAGC | 3 cut(s) | 192, 318, 666 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3399 |
| BpuEI | CTTGAG | 3 cut(s) | 1537, 1987, 3188 |
| BpuMI | CCSGG | 1 cut(s) | 295 |
| Bsa29I | ATCGAT | 1 cut(s) | 618 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2667, 2970 |
| BsaI | GGTCTC | 1 cut(s) | 1434 |
| BsaJI | CCNNGG | 9 cut(s) | 61, 204, 271, 1445, 1569, 2164, 2242, 2816, 3466 |
| BsaWI | WCCGGW | 1 cut(s) | 2473 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 313, 902, 958, 1307, 1729, 2244, 2811, 2981 |
| Bse118I | RCCGGY | 1 cut(s) | 2524 |
| Bse1I | ACTGG | 6 cut(s) | 31, 1252, 2019, 2711, 2929, 3353 |
| Bse21I | CCTNAGG | 1 cut(s) | 2053 |
| Bse3DI | GCAATG | 1 cut(s) | 445 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2667, 2970 |
| BseAI | TCCGGA | 1 cut(s) | 2473 |
| BseBI | CCWGG | 8 cut(s) | 273, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| BseCI | ATCGAT | 1 cut(s) | 618 |
| BseDI | CCNNGG | 9 cut(s) | 61, 204, 271, 1445, 1569, 2164, 2242, 2816, 3466 |
| BseJI | GATNNNNATC | 2 cut(s) | 2667, 2970 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 313, 902, 958, 1307, 1729, 2244, 2811, 2981 |
| BseMI | GCAATG | 1 cut(s) | 445 |
| BseMII | CTCAG | 8 cut(s) | 332, 657, 1392, 1644, 2067, 2417, 3291, 3390 |
| BseNI | ACTGG | 6 cut(s) | 31, 1252, 2019, 2711, 2929, 3353 |
| BseRI | GAGGAG | 5 cut(s) | 161, 533, 642, 1589, 2477 |
| BseSI | GKGCMC | 2 cut(s) | 1522, 2932 |
| BseYI | CCCAGC | 2 cut(s) | 1352, 3525 |
| Bsh1236I | CGCG | 2 cut(s) | 255, 2145 |
| Bsh1285I | CGRYCG | 1 cut(s) | 392 |
| BshFI | GGCC | 7 cut(s) | 323, 1809, 2237, 2815, 2930, 3076, 3320 |
| BshNI | GGYRCC | 1 cut(s) | 1475 |
| BshVI | ATCGAT | 1 cut(s) | 618 |
| BsiEI | CGRYCG | 1 cut(s) | 392 |
| BsiHKAI | GWGCWC | 3 cut(s) | 351, 1522, 2161 |
| BsiSI | CCGG | 4 cut(s) | 294, 2474, 2525, 3321 |
| BslFI | GGGAC | 5 cut(s) | 1938, 2211, 2496, 3214, 3484 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 313, 902, 958, 1307, 1729, 2244, 2811, 2981 |
| BsmAI | GTCTC | 2 cut(s) | 1434, 3181 |
| BsmFI | GGGAC | 5 cut(s) | 1938, 2211, 2496, 3214, 3484 |
| BsmI | GAATGC | 4 cut(s) | 1099, 1114, 1621, 1741 |
| BsnI | GGCC | 7 cut(s) | 323, 1809, 2237, 2815, 2930, 3076, 3320 |
| Bso31I | GGTCTC | 1 cut(s) | 1434 |
| Bsp120I | GGGCCC | 1 cut(s) | 2928 |
| Bsp1286I | GDGCHC | 6 cut(s) | 319, 351, 1522, 2161, 2932, 3493 |
| Bsp13I | TCCGGA | 1 cut(s) | 2473 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3399 |
| Bsp19I | CCATGG | 2 cut(s) | 204, 2164 |
| BspACI | CCGC | 9 cut(s) | 569, 1077, 2131, 2143, 2225, 2273, 2812, 3077, 3221 |
| BspANI | GGCC | 7 cut(s) | 323, 1809, 2237, 2815, 2930, 3076, 3320 |
| BspCNI | CTCAG | 8 cut(s) | 331, 658, 1393, 1643, 2066, 2416, 3292, 3391 |
| BspDI | ATCGAT | 1 cut(s) | 618 |
| BspEI | TCCGGA | 1 cut(s) | 2473 |
| BspFNI | CGCG | 2 cut(s) | 255, 2145 |
| BspHI | TCATGA | 3 cut(s) | 964, 1185, 3178 |
| BspMAI | CTGCAG | 3 cut(s) | 553, 2077, 2506 |
| BspMI | ACCTGC | 2 cut(s) | 2080, 2498 |
| BspOI | GCTAGC | 1 cut(s) | 1278 |
| BspT107I | GGYRCC | 1 cut(s) | 1475 |
| BspTI | CTTAAG | 1 cut(s) | 1916 |
| BspTNI | GGTCTC | 1 cut(s) | 1434 |
| BsrDI | GCAATG | 1 cut(s) | 445 |
| BsrFI | RCCGGY | 1 cut(s) | 2524 |
| BsrI | ACTGG | 6 cut(s) | 31, 1252, 2019, 2711, 2929, 3353 |
| BssAI | RCCGGY | 1 cut(s) | 2524 |
| BssECI | CCNNGG | 9 cut(s) | 61, 204, 271, 1445, 1569, 2164, 2242, 2816, 3466 |
| BssNAI | GTATAC | 1 cut(s) | 3114 |
| BssSI | CACGAG | 1 cut(s) | 993 |
| BssT1I | CCWWGG | 4 cut(s) | 61, 204, 2164, 3466 |
| Bst1107I | GTATAC | 1 cut(s) | 3114 |
| Bst2BI | CACGAG | 1 cut(s) | 993 |
| Bst2UI | CCWGG | 8 cut(s) | 273, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| Bst4CI | ACNGT | 6 cut(s) | 1226, 1507, 1729, 1789, 1817, 3111 |
| Bst6I | CTCTTC | 2 cut(s) | 369, 2780 |
| BstAFI | CTTAAG | 1 cut(s) | 1916 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1094, 1655 |
| BstC8I | GCNNGC | 5 cut(s) | 549, 574, 1276, 1358, 1849 |
| BstDSI | CCRYGG | 2 cut(s) | 204, 2164 |
| BstEII | GGTNACC | 1 cut(s) | 3442 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 956, 1305 |
| BstFNI | CGCG | 2 cut(s) | 255, 2145 |
| BstHHI | GCGC | 1 cut(s) | 255 |
| BstMAI | GTCTC | 2 cut(s) | 1434, 3181 |
| BstMCI | CGRYCG | 1 cut(s) | 392 |
| BstNI | CCWGG | 8 cut(s) | 273, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| BstNSI | RCATGY | 2 cut(s) | 1360, 1832 |
| BstPI | GGTNACC | 1 cut(s) | 3442 |
| BstSCI | CCNGG | 9 cut(s) | 271, 293, 901, 1445, 1569, 2241, 2815, 3438, 3520 |
| BstSFI | CTRYAG | 5 cut(s) | 549, 702, 1341, 2073, 2502 |
| BstSLI | GKGCMC | 2 cut(s) | 1522, 2932 |
| BstUI | CGCG | 2 cut(s) | 255, 2145 |
| BstV2I | GAAGAC | 2 cut(s) | 390, 1227 |
| BstX2I | RGATCY | 8 cut(s) | 14, 2449, 2662, 2707, 2820, 2917, 2971, 3010 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1759 |
| BstYI | RGATCY | 8 cut(s) | 14, 2449, 2662, 2707, 2820, 2917, 2971, 3010 |
| BstZ17I | GTATAC | 1 cut(s) | 3114 |
| Bsu15I | ATCGAT | 1 cut(s) | 618 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2053 |
| BsuRI | GGCC | 7 cut(s) | 323, 1809, 2237, 2815, 2930, 3076, 3320 |
| BsuTUI | ATCGAT | 1 cut(s) | 618 |
| BtgI | CCRYGG | 2 cut(s) | 204, 2164 |
| BtgZI | GCGATG | 1 cut(s) | 2976 |
| BtrI | CACGTC | 1 cut(s) | 2324 |
| BtsIMutI | CAGTG | 5 cut(s) | 147, 160, 633, 1088, 1822 |
| BveI | ACCTGC | 2 cut(s) | 2080, 2498 |
| Cac8I | GCNNGC | 5 cut(s) | 549, 574, 1276, 1358, 1849 |
| CaiI | CAGNNNCTG | 3 cut(s) | 632, 854, 1745 |
| CciI | TCATGA | 3 cut(s) | 964, 1185, 3178 |
| CfoI | GCGC | 1 cut(s) | 255 |
| Cfr10I | RCCGGY | 1 cut(s) | 2524 |
| ClaI | ATCGAT | 1 cut(s) | 618 |
| CseI | GACGC | 3 cut(s) | 1050, 1996, 2459 |
| CsiI | ACCWGGT | 1 cut(s) | 3438 |
| Csp6I | GTAC | 5 cut(s) | 24, 326, 1785, 2714, 3420 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 123, 158 |
| CviQI | GTAC | 5 cut(s) | 24, 326, 1785, 2714, 3420 |
| DraI | TTTAAA | 2 cut(s) | 918, 1710 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1203 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1203 |
| EaeI | YGGCCR | 3 cut(s) | 2235, 3074, 3318 |
| Eam1104I | CTCTTC | 2 cut(s) | 369, 2780 |
| EarI | CTCTTC | 2 cut(s) | 369, 2780 |
| EciI | GGCGGA | 1 cut(s) | 2288 |
| Ecl136II | GAGCTC | 1 cut(s) | 349 |
| Eco130I | CCWWGG | 4 cut(s) | 61, 204, 2164, 3466 |
| Eco24I | GRGCYC | 4 cut(s) | 319, 351, 2932, 3493 |
| Eco31I | GGTCTC | 1 cut(s) | 1434 |
| Eco32I | GATATC | 2 cut(s) | 696, 1882 |
| Eco47I | GGWCC | 8 cut(s) | 931, 949, 1592, 1700, 2510, 2802, 3155, 3471 |
| Eco53kI | GAGCTC | 1 cut(s) | 349 |
| Eco81I | CCTNAGG | 1 cut(s) | 2053 |
| Eco91I | GGTNACC | 1 cut(s) | 3442 |
| EcoICRI | GAGCTC | 1 cut(s) | 349 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 956, 1305 |
| EcoO109I | RGGNCCY | 5 cut(s) | 931, 2510, 2928, 2929, 3155 |
| EcoO65I | GGTNACC | 1 cut(s) | 3442 |
| EcoRI | GAATTC | 3 cut(s) | 412, 598, 1396 |
| EcoRII | CCWGG | 8 cut(s) | 271, 901, 1445, 1569, 2241, 2815, 3438, 3520 |
| EcoRV | GATATC | 2 cut(s) | 696, 1882 |
| EcoT14I | CCWWGG | 4 cut(s) | 61, 204, 2164, 3466 |
| EcoT22I | ATGCAT | 1 cut(s) | 1621 |
| EcoT38I | GRGCYC | 4 cut(s) | 319, 351, 2932, 3493 |
| ErhI | CCWWGG | 4 cut(s) | 61, 204, 2164, 3466 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1840, 1872, 1927, 1959 |
| FaqI | GGGAC | 5 cut(s) | 1938, 2211, 2496, 3214, 3484 |
| FauI | CCCGC | 1 cut(s) | 2150 |
| FauNDI | CATATG | 1 cut(s) | 2790 |
| FbaI | TGATCA | 1 cut(s) | 3175 |
| FblI | GTMKAC | 1 cut(s) | 3113 |
| FriOI | GRGCYC | 4 cut(s) | 319, 351, 2932, 3493 |
| GlaI | GCGC | 1 cut(s) | 254 |
| GsaI | CCCAGC | 2 cut(s) | 1356, 3529 |
| GsuI | CTGGAG | 1 cut(s) | 1592 |
| HaeIII | GGCC | 7 cut(s) | 323, 1809, 2237, 2815, 2930, 3076, 3320 |
| HapII | CCGG | 4 cut(s) | 294, 2474, 2525, 3321 |
| HgaI | GACGC | 3 cut(s) | 1050, 1996, 2459 |
| HhaI | GCGC | 1 cut(s) | 255 |
| Hin6I | GCGC | 1 cut(s) | 253 |
| HinP1I | GCGC | 1 cut(s) | 253 |
| HincII | GTYRAC | 1 cut(s) | 2849 |
| HindII | GTYRAC | 1 cut(s) | 2849 |
| HindIII | AAGCTT | 1 cut(s) | 1422 |
| HpaII | CCGG | 4 cut(s) | 294, 2474, 2525, 3321 |
| Hpy166II | GTNNAC | 6 cut(s) | 1520, 2096, 2802, 2849, 3114, 3420 |
| Hpy8I | GTNNAC | 6 cut(s) | 1520, 2096, 2802, 2849, 3114, 3420 |
| Hpy99I | CGWCG | 1 cut(s) | 397 |
| HpyCH4III | ACNGT | 6 cut(s) | 1226, 1507, 1729, 1789, 1817, 3111 |
| HpyCH4IV | ACGT | 2 cut(s) | 1544, 2323 |
| HpySE526I | ACGT | 2 cut(s) | 1544, 2323 |
| HspAI | GCGC | 1 cut(s) | 253 |
| Kpn2I | TCCGGA | 1 cut(s) | 2473 |
| Ksp22I | TGATCA | 1 cut(s) | 3175 |
| LmnI | GCTCC | 3 cut(s) | 435, 544, 2464 |
| MabI | ACCWGGT | 1 cut(s) | 3438 |
| MaeII | ACGT | 2 cut(s) | 1544, 2323 |
| MaeIII | GTNAC | 3 cut(s) | 628, 2287, 3442 |
| MflI | RGATCY | 8 cut(s) | 14, 2449, 2662, 2707, 2820, 2917, 2971, 3010 |
| MhlI | GDGCHC | 6 cut(s) | 319, 351, 1522, 2161, 2932, 3493 |
| MlyI | GAGTC | 3 cut(s) | 845, 1586, 2126 |
| MmeI | TCCRAC | 7 cut(s) | 495, 927, 1232, 1659, 1678, 1919, 2945 |
| Mph1103I | ATGCAT | 1 cut(s) | 1621 |
| MroI | TCCGGA | 1 cut(s) | 2473 |
| MroXI | GAANNNNTTC | 2 cut(s) | 38, 1197 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2169 |
| MspA1I | CMGCKG | 5 cut(s) | 803, 2024, 2501, 3041, 3398 |
| MspCI | CTTAAG | 1 cut(s) | 1916 |
| MspI | CCGG | 4 cut(s) | 294, 2474, 2525, 3321 |
| MspR9I | CCNGG | 9 cut(s) | 273, 295, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| Mva1269I | GAATGC | 4 cut(s) | 1099, 1114, 1621, 1741 |
| MvaI | CCWGG | 8 cut(s) | 273, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| MvnI | CGCG | 2 cut(s) | 255, 2145 |
| NciI | CCSGG | 1 cut(s) | 295 |
| NcoI | CCATGG | 2 cut(s) | 204, 2164 |
| NdeI | CATATG | 1 cut(s) | 2790 |
| NheI | GCTAGC | 1 cut(s) | 1274 |
| NmuCI | GTSAC | 3 cut(s) | 628, 2287, 3442 |
| NsiI | ATGCAT | 1 cut(s) | 1621 |
| NspI | RCATGY | 2 cut(s) | 1360, 1832 |
| PaeI | GCATGC | 1 cut(s) | 1360 |
| PagI | TCATGA | 3 cut(s) | 964, 1185, 3178 |
| PaqCI | CACCTGC | 1 cut(s) | 2080 |
| PctI | GAATGC | 4 cut(s) | 1099, 1114, 1621, 1741 |
| PdmI | GAANNNNTTC | 2 cut(s) | 38, 1197 |
| PflFI | GACNNNGTC | 1 cut(s) | 3440 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1729 |
| Ple19I | CGATCG | 1 cut(s) | 392 |
| PleI | GAGTC | 3 cut(s) | 845, 1585, 2125 |
| PpsI | GAGTC | 3 cut(s) | 845, 1585, 2125 |
| PpuMI | RGGWCCY | 3 cut(s) | 931, 2510, 3155 |
| PsiI | TTATAA | 1 cut(s) | 1541 |
| Psp124BI | GAGCTC | 1 cut(s) | 351 |
| Psp1406I | AACGTT | 1 cut(s) | 1544 |
| Psp5II | RGGWCCY | 3 cut(s) | 931, 2510, 3155 |
| Psp6I | CCWGG | 8 cut(s) | 271, 901, 1445, 1569, 2241, 2815, 3438, 3520 |
| PspEI | GGTNACC | 1 cut(s) | 3442 |
| PspFI | CCCAGC | 2 cut(s) | 1352, 3525 |
| PspGI | CCWGG | 8 cut(s) | 271, 901, 1445, 1569, 2241, 2815, 3438, 3520 |
| PspOMI | GGGCCC | 1 cut(s) | 2928 |
| PspPPI | RGGWCCY | 3 cut(s) | 931, 2510, 3155 |
| PstI | CTGCAG | 3 cut(s) | 553, 2077, 2506 |
| PstNI | CAGNNNCTG | 3 cut(s) | 632, 854, 1745 |
| PsuI | RGATCY | 8 cut(s) | 14, 2449, 2662, 2707, 2820, 2917, 2971, 3010 |
| PsyI | GACNNNGTC | 1 cut(s) | 3440 |
| PvuI | CGATCG | 1 cut(s) | 392 |
| PvuII | CAGCTG | 5 cut(s) | 803, 2024, 2501, 3041, 3398 |
| RsaI | GTAC | 5 cut(s) | 25, 327, 1786, 2715, 3421 |
| RsaNI | GTAC | 5 cut(s) | 24, 326, 1785, 2714, 3420 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2169 |
| SacI | GAGCTC | 1 cut(s) | 351 |
| SbfI | CCTGCAGG | 1 cut(s) | 2077 |
| ScaI | AGTACT | 1 cut(s) | 1786 |
| SchI | GAGTC | 3 cut(s) | 845, 1586, 2126 |
| ScrFI | CCNGG | 9 cut(s) | 273, 295, 903, 1447, 1571, 2243, 2817, 3440, 3522 |
| SdaI | CCTGCAGG | 1 cut(s) | 2077 |
| SduI | GDGCHC | 6 cut(s) | 319, 351, 1522, 2161, 2932, 3493 |
| SexAI | ACCWGGT | 1 cut(s) | 3438 |
| SfcI | CTRYAG | 5 cut(s) | 549, 702, 1341, 2073, 2502 |
| SinI | GGWCC | 8 cut(s) | 931, 949, 1592, 1700, 2510, 2802, 3155, 3471 |
| SmiI | ATTTAAAT | 1 cut(s) | 1710 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2169 |
| SmlI | CTYRAG | 4 cut(s) | 1552, 1916, 2002, 3167 |
| SmoI | CTYRAG | 4 cut(s) | 1552, 1916, 2002, 3167 |
| SpeI | ACTAGT | 1 cut(s) | 2422 |
| SphI | GCATGC | 1 cut(s) | 1360 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 2077 |
| SsiI | CCGC | 9 cut(s) | 569, 1077, 2131, 2143, 2225, 2273, 2812, 3077, 3221 |
| SspI | AATATT | 3 cut(s) | 2218, 2350, 3289 |
| SstI | GAGCTC | 1 cut(s) | 351 |
| StyD4I | CCNGG | 9 cut(s) | 271, 293, 901, 1445, 1569, 2241, 2815, 3438, 3520 |
| StyI | CCWWGG | 4 cut(s) | 61, 204, 2164, 3466 |
| SwaI | ATTTAAAT | 1 cut(s) | 1710 |
| TaaI | ACNGT | 6 cut(s) | 1226, 1507, 1729, 1789, 1817, 3111 |
| TaiI | ACGT | 2 cut(s) | 1547, 2326 |
| TaqI | TCGA | 4 cut(s) | 51, 618, 1453, 1502 |
| TaqII | GACCGA | 1 cut(s) | 3488 |
| TatI | WGTACW | 3 cut(s) | 23, 1784, 2713 |
| TauI | GCSGC | 3 cut(s) | 572, 2815, 3079 |
| TscAI | CASTG | 5 cut(s) | 147, 160, 633, 1095, 1822 |
| TseFI | GTSAC | 3 cut(s) | 628, 2287, 3442 |
| Tsp45I | GTSAC | 3 cut(s) | 628, 2287, 3442 |
| TspDTI | ATGAA | 9 cut(s) | 498, 626, 689, 854, 996, 1281, 2150, 2774, 3285 |
| TspGWI | ACGGA | 3 cut(s) | 701, 2912, 3322 |
| TspRI | CASTG | 5 cut(s) | 147, 160, 633, 1095, 1822 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3440 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1729 |
| Vha464I | CTTAAG | 1 cut(s) | 1916 |
| VneI | GTGCAC | 1 cut(s) | 1518 |
| VpaK11BI | GGWCC | 8 cut(s) | 931, 949, 1592, 1700, 2510, 2802, 3155, 3471 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 956, 1305 |
| XapI | RAATTY | 5 cut(s) | 123, 412, 598, 1396, 2827 |
| XbaI | TCTAGA | 3 cut(s) | 1106, 2665, 2954 |
| XceI | RCATGY | 2 cut(s) | 1360, 1832 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1468 |
| XmaJI | CCTAGG | 1 cut(s) | 61 |
| XmiI | GTMKAC | 1 cut(s) | 3113 |
| XmnI | GAANNNNTTC | 2 cut(s) | 38, 1197 |
| ZrmI | AGTACT | 1 cut(s) | 1786 |
| Zsp2I | ATGCAT | 1 cut(s) | 1621 |