RNA polymerase II C-terminal domain phosphatase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G33540 AT2G33540 |
| fragaria_vesca | FvH4_4g22870 FvH4_4g22870 FvH4_4g22870 |
| malus_domestica | MD13G1129000.v1.1 MD16G1128700.v1.1 MD16G1128800.v1.1 |
| prunus_persica | Prupe.1G217600_v2.0.a1 |
| pyrus_communis | pycom13g11190 pycom13g11200 pycom16g10920 |
| rosa_chinensis | RchiOBHm_Chr4g0429111 RchiOBHm_Chr4g0429121 |
| rosa_laevigata | RLG00000007096 |
| rosa_multiflora | Rmu_sc0000846.1_g000014 |
| rosa_roxburghii | Rroxscaffold_5G00370740 |
| rosa_rugosa | Rorug04G0233100 |
| rosa_samantha | Rh4AG289100 Rh4BG295100 Rh4CG310500 Rh4DG292000 |
| rosa_wichuraiana | Rw4G025040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2227 |
| AatII | GACGTC | 1 cut(s) | 2031 |
| Acc36I | ACCTGC | 2 cut(s) | 2227, 2915 |
| Acc65I | GGTACC | 2 cut(s) | 57, 2126 |
| AccB1I | GGYRCC | 6 cut(s) | 25, 57, 530, 632, 2126, 2239 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2071, 2137 |
| AccI | GTMKAC | 1 cut(s) | 3530 |
| AccII | CGCG | 8 cut(s) | 185, 202, 269, 435, 516, 528, 986, 1461 |
| AcoI | YGGCCR | 4 cut(s) | 174, 334, 2943, 3491 |
| AcsI | RAATTY | 7 cut(s) | 705, 745, 1314, 1517, 3141, 3244, 3508 |
| AcuI | CTGAAG | 3 cut(s) | 1314, 1539, 1758 |
| AcvI | CACGTG | 1 cut(s) | 2949 |
| AcyI | GRCGYC | 3 cut(s) | 531, 981, 2028 |
| AfaI | GTAC | 6 cut(s) | 59, 229, 302, 2128, 2194, 2814 |
| AfeI | AGCGCT | 1 cut(s) | 37 |
| AflII | CTTAAG | 1 cut(s) | 2324 |
| AjiI | CACGTC | 1 cut(s) | 1637 |
| AjnI | CCWGG | 4 cut(s) | 2122, 2188, 2419, 3232 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 501, 533, 2470, 2502 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1621, 1653 |
| Alw21I | GWGCWC | 2 cut(s) | 2408, 3839 |
| Alw26I | GTCTC | 6 cut(s) | 399, 491, 927, 1034, 1782, 3598 |
| Alw44I | GTGCAC | 1 cut(s) | 3835 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1739, 2071, 2705, 2717 |
| Ama87I | CYCGRG | 5 cut(s) | 305, 731, 774, 1205, 1450 |
| Aor51HI | AGCGCT | 1 cut(s) | 37 |
| AoxI | GGCC | 6 cut(s) | 174, 334, 2943, 3230, 3491, 3711 |
| ApaLI | GTGCAC | 1 cut(s) | 3835 |
| ApoI | RAATTY | 7 cut(s) | 705, 745, 1314, 1517, 3141, 3244, 3508 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 25, 57 |
| AseI | ATTAAT | 4 cut(s) | 2106, 2172, 2246, 2646 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 826 |
| Asp718I | GGTACC | 2 cut(s) | 57, 2126 |
| AspA2I | CCTAGG | 1 cut(s) | 1793 |
| AspLEI | GCGC | 6 cut(s) | 38, 185, 328, 437, 533, 1615 |
| AsuC2I | CCSGG | 6 cut(s) | 147, 496, 1451, 1452, 2537, 3939 |
| AsuNHI | GCTAGC | 2 cut(s) | 1694, 2726 |
| AvaI | CYCGRG | 5 cut(s) | 305, 731, 774, 1205, 1450 |
| AvrII | CCTAGG | 1 cut(s) | 1793 |
| AxyI | CCTNAGG | 1 cut(s) | 1920 |
| BaeGI | GKGCMC | 2 cut(s) | 3839, 3910 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 49, 82 |
| BalI | TGGCCA | 1 cut(s) | 3493 |
| BamHI | GGATCC | 2 cut(s) | 2539, 3388 |
| BanI | GGYRCC | 6 cut(s) | 25, 57, 530, 632, 2126, 2239 |
| BanII | GRGCYC | 3 cut(s) | 411, 2408, 3349 |
| BbrPI | CACGTG | 1 cut(s) | 2949 |
| BbsI | GAAGAC | 1 cut(s) | 1481 |
| Bbv12I | GWGCWC | 2 cut(s) | 2408, 3839 |
| BbvCI | CCTCAGC | 2 cut(s) | 1017, 2877 |
| BceAI | ACGGC | 4 cut(s) | 48, 321, 1707, 3569 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 622, 656, 2900, 2934 |
| BciT130I | CCWGG | 4 cut(s) | 2124, 2190, 2421, 3234 |
| BciVI | GTATCC | 2 cut(s) | 1068, 1576 |
| BclI | TGATCA | 3 cut(s) | 2866, 3592, 3853 |
| BcnI | CCSGG | 6 cut(s) | 147, 496, 1451, 1452, 2537, 3939 |
| BcoDI | GTCTC | 6 cut(s) | 399, 491, 927, 1034, 1782, 3598 |
| BfmI | CTRYAG | 7 cut(s) | 1103, 1156, 1465, 2379, 2706, 2919, 3312 |
| BfoI | RGCGCY | 3 cut(s) | 39, 329, 534 |
| BfrI | CTTAAG | 1 cut(s) | 2324 |
| BfuAI | ACCTGC | 2 cut(s) | 2227, 2915 |
| BfuI | GTATCC | 2 cut(s) | 1068, 1576 |
| BglII | AGATCT | 2 cut(s) | 887, 3660 |
| BlnI | CCTAGG | 1 cut(s) | 1793 |
| BlpI | GCTNAGC | 2 cut(s) | 2260, 2358 |
| BmeT110I | CYCGRG | 5 cut(s) | 305, 731, 774, 1205, 1450 |
| BmgBI | CACGTC | 1 cut(s) | 1637 |
| BmtI | GCTAGC | 2 cut(s) | 1698, 2730 |
| BpiI | GAAGAC | 1 cut(s) | 1481 |
| BpmI | CTGGAG | 3 cut(s) | 2093, 2442, 2481 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1017, 2877 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 2260, 2358 |
| BpuEI | CTTGAG | 4 cut(s) | 612, 1885, 2392, 3605 |
| BpuMI | CCSGG | 6 cut(s) | 147, 496, 1451, 1452, 2537, 3939 |
| BsaAI | YACGTR | 1 cut(s) | 2949 |
| BsaBI | GATNNNNATC | 3 cut(s) | 385, 3084, 3387 |
| BsaHI | GRCGYC | 3 cut(s) | 531, 981, 2028 |
| BsaI | GGTCTC | 2 cut(s) | 399, 1782 |
| BsaWI | WCCGGW | 2 cut(s) | 414, 3195 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2383, 2413 |
| Bse118I | RCCGGY | 3 cut(s) | 172, 401, 2941 |
| Bse1I | ACTGG | 3 cut(s) | 962, 3128, 3770 |
| Bse21I | CCTNAGG | 1 cut(s) | 1920 |
| Bse3DI | GCAATG | 1 cut(s) | 2721 |
| Bse8I | GATNNNNATC | 3 cut(s) | 385, 3084, 3387 |
| BseBI | CCWGG | 4 cut(s) | 2124, 2190, 2421, 3234 |
| BseJI | GATNNNNATC | 3 cut(s) | 385, 3084, 3387 |
| BseMI | GCAATG | 1 cut(s) | 2721 |
| BseMII | CTCAG | 8 cut(s) | 1008, 1911, 1986, 2274, 2372, 2834, 2868, 3708 |
| BseNI | ACTGG | 3 cut(s) | 962, 3128, 3770 |
| BseRI | GAGGAG | 9 cut(s) | 265, 1109, 1352, 1364, 1416, 1419, 1662, 1665, 1937 |
| BseSI | GKGCMC | 2 cut(s) | 3839, 3910 |
| BseX3I | CGGCCG | 2 cut(s) | 174, 334 |
| BseYI | CCCAGC | 1 cut(s) | 3942 |
| BsgI | GTGCAG | 2 cut(s) | 1752, 2889 |
| Bsh1236I | CGCG | 8 cut(s) | 185, 202, 269, 435, 516, 528, 986, 1461 |
| Bsh1285I | CGRYCG | 5 cut(s) | 177, 337, 482, 1483, 1502 |
| BshFI | GGCC | 6 cut(s) | 176, 336, 2945, 3232, 3493, 3713 |
| BshNI | GGYRCC | 6 cut(s) | 25, 57, 530, 632, 2126, 2239 |
| BsiEI | CGRYCG | 5 cut(s) | 177, 337, 482, 1483, 1502 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2408, 3839 |
| BsiHKCI | CYCGRG | 5 cut(s) | 305, 731, 774, 1205, 1450 |
| BslFI | GGGAC | 6 cut(s) | 101, 129, 1448, 1623, 2604, 3901 |
| BsmAI | GTCTC | 6 cut(s) | 399, 491, 927, 1034, 1782, 3598 |
| BsmFI | GGGAC | 6 cut(s) | 101, 129, 1448, 1623, 2604, 3901 |
| BsnI | GGCC | 6 cut(s) | 176, 336, 2945, 3232, 3493, 3713 |
| Bso31I | GGTCTC | 2 cut(s) | 399, 1782 |
| BsoBI | CYCGRG | 5 cut(s) | 305, 731, 774, 1205, 1450 |
| Bsp1286I | GDGCHC | 5 cut(s) | 411, 2408, 3349, 3839, 3910 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 2260, 2358 |
| Bsp19I | CCATGG | 1 cut(s) | 1069 |
| Bsp68I | TCGCGA | 1 cut(s) | 202 |
| BspANI | GGCC | 6 cut(s) | 176, 336, 2945, 3232, 3493, 3713 |
| BspCNI | CTCAG | 8 cut(s) | 1009, 1912, 1985, 2273, 2371, 2833, 2869, 3709 |
| BspFNI | CGCG | 8 cut(s) | 185, 202, 269, 435, 516, 528, 986, 1461 |
| BspHI | TCATGA | 2 cut(s) | 1123, 3595 |
| BspMAI | CTGCAG | 3 cut(s) | 1107, 2383, 2923 |
| BspMI | ACCTGC | 2 cut(s) | 2227, 2915 |
| BspOI | GCTAGC | 2 cut(s) | 1698, 2730 |
| BspT107I | GGYRCC | 6 cut(s) | 25, 57, 530, 632, 2126, 2239 |
| BspTI | CTTAAG | 1 cut(s) | 2324 |
| BspTNI | GGTCTC | 2 cut(s) | 399, 1782 |
| BsrDI | GCAATG | 1 cut(s) | 2721 |
| BsrFI | RCCGGY | 3 cut(s) | 172, 401, 2941 |
| BsrI | ACTGG | 3 cut(s) | 962, 3128, 3770 |
| BssAI | RCCGGY | 3 cut(s) | 172, 401, 2941 |
| BssNAI | GTATAC | 1 cut(s) | 3531 |
| BssNI | GRCGYC | 3 cut(s) | 531, 981, 2028 |
| BssT1I | CCWWGG | 4 cut(s) | 115, 1069, 1134, 1793 |
| Bst1107I | GTATAC | 1 cut(s) | 3531 |
| Bst2UI | CCWGG | 4 cut(s) | 2124, 2190, 2421, 3234 |
| Bst6I | CTCTTC | 2 cut(s) | 1554, 3197 |
| BstACI | GRCGYC | 3 cut(s) | 531, 981, 2028 |
| BstAFI | CTTAAG | 1 cut(s) | 2324 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1730, 3066 |
| BstBAI | YACGTR | 1 cut(s) | 2949 |
| BstDSI | CCRYGG | 4 cut(s) | 984, 1069, 1114, 2557 |
| BstEII | GGTNACC | 1 cut(s) | 3859 |
| BstFNI | CGCG | 8 cut(s) | 185, 202, 269, 435, 516, 528, 986, 1461 |
| BstH2I | RGCGCY | 3 cut(s) | 39, 329, 534 |
| BstHHI | GCGC | 6 cut(s) | 38, 185, 328, 437, 533, 1615 |
| BstMAI | GTCTC | 6 cut(s) | 399, 491, 927, 1034, 1782, 3598 |
| BstMCI | CGRYCG | 5 cut(s) | 177, 337, 482, 1483, 1502 |
| BstNI | CCWGG | 4 cut(s) | 2124, 2190, 2421, 3234 |
| BstNSI | RCATGY | 2 cut(s) | 1007, 1264 |
| BstPI | GGTNACC | 1 cut(s) | 3859 |
| BstSFI | CTRYAG | 7 cut(s) | 1103, 1156, 1465, 2379, 2706, 2919, 3312 |
| BstSLI | GKGCMC | 2 cut(s) | 3839, 3910 |
| BstUI | CGCG | 8 cut(s) | 185, 202, 269, 435, 516, 528, 986, 1461 |
| BstV2I | GAAGAC | 1 cut(s) | 1481 |
| BstX2I | RGATCY | 7 cut(s) | 887, 2539, 3079, 3124, 3388, 3427, 3660 |
| BstYI | RGATCY | 7 cut(s) | 887, 2539, 3079, 3124, 3388, 3427, 3660 |
| BstZ17I | GTATAC | 1 cut(s) | 3531 |
| BstZI | CGGCCG | 2 cut(s) | 174, 334 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1920 |
| BsuI | GTATCC | 2 cut(s) | 1068, 1576 |
| BsuRI | GGCC | 6 cut(s) | 176, 336, 2945, 3232, 3493, 3713 |
| BtgI | CCRYGG | 4 cut(s) | 984, 1069, 1114, 2557 |
| BtgZI | GCGATG | 1 cut(s) | 423 |
| BtrI | CACGTC | 1 cut(s) | 1637 |
| BtsIMutI | CAGTG | 8 cut(s) | 969, 1219, 1227, 1338, 1351, 1980, 2706, 3135 |
| BtuMI | TCGCGA | 1 cut(s) | 202 |
| BveI | ACCTGC | 2 cut(s) | 2227, 2915 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1739, 2071, 2705, 2717 |
| CciI | TCATGA | 2 cut(s) | 1123, 3595 |
| CfoI | GCGC | 6 cut(s) | 38, 185, 328, 437, 533, 1615 |
| Cfr10I | RCCGGY | 3 cut(s) | 172, 401, 2941 |
| Cfr42I | CCGCGG | 1 cut(s) | 987 |
| Cfr9I | CCCGGG | 1 cut(s) | 1450 |
| CseI | GACGC | 3 cut(s) | 87, 989, 3942 |
| Csp6I | GTAC | 6 cut(s) | 58, 228, 301, 2127, 2193, 2813 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1956, 1991 |
| CviQI | GTAC | 6 cut(s) | 58, 228, 301, 2127, 2193, 2813 |
| DinI | GGCGCC | 1 cut(s) | 532 |
| EaeI | YGGCCR | 4 cut(s) | 174, 334, 2943, 3491 |
| EagI | CGGCCG | 2 cut(s) | 174, 334 |
| Eam1104I | CTCTTC | 2 cut(s) | 1554, 3197 |
| EarI | CTCTTC | 2 cut(s) | 1554, 3197 |
| EciI | GGCGGA | 1 cut(s) | 1413 |
| Ecl136II | GAGCTC | 1 cut(s) | 2406 |
| EclXI | CGGCCG | 2 cut(s) | 174, 334 |
| Eco130I | CCWWGG | 4 cut(s) | 115, 1069, 1134, 1793 |
| Eco24I | GRGCYC | 3 cut(s) | 411, 2408, 3349 |
| Eco31I | GGTCTC | 2 cut(s) | 399, 1782 |
| Eco47III | AGCGCT | 1 cut(s) | 37 |
| Eco52I | CGGCCG | 2 cut(s) | 174, 334 |
| Eco53kI | GAGCTC | 1 cut(s) | 2406 |
| Eco57I | CTGAAG | 3 cut(s) | 1314, 1539, 1758 |
| Eco72I | CACGTG | 1 cut(s) | 2949 |
| Eco81I | CCTNAGG | 1 cut(s) | 1920 |
| Eco88I | CYCGRG | 5 cut(s) | 305, 731, 774, 1205, 1450 |
| Eco91I | GGTNACC | 1 cut(s) | 3859 |
| EcoICRI | GAGCTC | 1 cut(s) | 2406 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3572 |
| EcoO65I | GGTNACC | 1 cut(s) | 3859 |
| EcoRI | GAATTC | 1 cut(s) | 1517 |
| EcoRII | CCWGG | 4 cut(s) | 2122, 2188, 2419, 3232 |
| EcoT14I | CCWWGG | 4 cut(s) | 115, 1069, 1134, 1793 |
| EcoT22I | ATGCAT | 1 cut(s) | 3282 |
| EcoT38I | GRGCYC | 3 cut(s) | 411, 2408, 3349 |
| EgeI | GGCGCC | 1 cut(s) | 532 |
| EheI | GGCGCC | 1 cut(s) | 532 |
| ErhI | CCWWGG | 4 cut(s) | 115, 1069, 1134, 1793 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2248, 2280 |
| FaqI | GGGAC | 6 cut(s) | 101, 129, 1448, 1623, 2604, 3901 |
| FauI | CCCGC | 4 cut(s) | 336, 924, 1023, 1425 |
| FauNDI | CATATG | 1 cut(s) | 3207 |
| FbaI | TGATCA | 3 cut(s) | 2866, 3592, 3853 |
| FblI | GTMKAC | 1 cut(s) | 3530 |
| FriOI | GRGCYC | 3 cut(s) | 411, 2408, 3349 |
| GlaI | GCGC | 6 cut(s) | 37, 184, 327, 436, 532, 1614 |
| GsaI | CCCAGC | 1 cut(s) | 3946 |
| GsuI | CTGGAG | 3 cut(s) | 2093, 2442, 2481 |
| HaeII | RGCGCY | 3 cut(s) | 39, 329, 534 |
| HaeIII | GGCC | 6 cut(s) | 176, 336, 2945, 3232, 3493, 3713 |
| HgaI | GACGC | 3 cut(s) | 87, 989, 3942 |
| HhaI | GCGC | 6 cut(s) | 38, 185, 328, 437, 533, 1615 |
| Hin1I | GRCGYC | 3 cut(s) | 531, 981, 2028 |
| Hin6I | GCGC | 6 cut(s) | 36, 183, 326, 435, 531, 1613 |
| HinP1I | GCGC | 6 cut(s) | 36, 183, 326, 435, 531, 1613 |
| HincII | GTYRAC | 3 cut(s) | 160, 1621, 3784 |
| HindII | GTYRAC | 3 cut(s) | 160, 1621, 3784 |
| HindIII | AAGCTT | 1 cut(s) | 2584 |
| HpaI | GTTAAC | 1 cut(s) | 1621 |
| Hpy99I | CGWCG | 2 cut(s) | 103, 1488 |
| HpyCH4IV | ACGT | 4 cut(s) | 1623, 1636, 2028, 2948 |
| HpySE526I | ACGT | 4 cut(s) | 1623, 1636, 2028, 2948 |
| Hsp92I | GRCGYC | 3 cut(s) | 531, 981, 2028 |
| HspAI | GCGC | 6 cut(s) | 36, 183, 326, 435, 531, 1613 |
| KasI | GGCGCC | 1 cut(s) | 530 |
| KpnI | GGTACC | 2 cut(s) | 61, 2130 |
| KroI | GCCGGC | 1 cut(s) | 172 |
| KroNI | GCCGGC | 1 cut(s) | 174 |
| Ksp22I | TGATCA | 3 cut(s) | 2866, 3592, 3853 |
| KspAI | GTTAAC | 1 cut(s) | 1621 |
| KspI | CCGCGG | 1 cut(s) | 987 |
| LmnI | GCTCC | 5 cut(s) | 369, 556, 2423, 2462, 2503 |
| MaeII | ACGT | 4 cut(s) | 1623, 1636, 2028, 2948 |
| MaeIII | GTNAC | 3 cut(s) | 937, 3296, 3859 |
| MfeI | CAATTG | 1 cut(s) | 1851 |
| MflI | RGATCY | 7 cut(s) | 887, 2539, 3079, 3124, 3388, 3427, 3660 |
| MhlI | GDGCHC | 5 cut(s) | 411, 2408, 3349, 3839, 3910 |
| MlsI | TGGCCA | 1 cut(s) | 3493 |
| MluNI | TGGCCA | 1 cut(s) | 3493 |
| Mly113I | GGCGCC | 1 cut(s) | 531 |
| MlyI | GAGTC | 6 cut(s) | 439, 493, 891, 1032, 1934, 2062 |
| MmeI | TCCRAC | 8 cut(s) | 81, 168, 499, 2001, 2020, 2327, 2525, 3362 |
| Mox20I | TGGCCA | 1 cut(s) | 3493 |
| Mph1103I | ATGCAT | 1 cut(s) | 3282 |
| MroNI | GCCGGC | 1 cut(s) | 172 |
| MroXI | GAANNNNTTC | 1 cut(s) | 826 |
| MscI | TGGCCA | 1 cut(s) | 3493 |
| MslI | CAYNNNNRTG | 4 cut(s) | 48, 402, 2562, 3612 |
| Msp20I | TGGCCA | 1 cut(s) | 3493 |
| MspA1I | CMGCKG | 5 cut(s) | 919, 986, 2429, 3458, 3815 |
| MspCI | CTTAAG | 1 cut(s) | 2324 |
| MunI | CAATTG | 1 cut(s) | 1851 |
| MvaI | CCWGG | 4 cut(s) | 2124, 2190, 2421, 3234 |
| MvnI | CGCG | 8 cut(s) | 185, 202, 269, 435, 516, 528, 986, 1461 |
| NaeI | GCCGGC | 1 cut(s) | 174 |
| NarI | GGCGCC | 1 cut(s) | 531 |
| NciI | CCSGG | 6 cut(s) | 147, 496, 1451, 1452, 2537, 3939 |
| NcoI | CCATGG | 1 cut(s) | 1069 |
| NdeI | CATATG | 1 cut(s) | 3207 |
| NgoMIV | GCCGGC | 1 cut(s) | 172 |
| NheI | GCTAGC | 2 cut(s) | 1694, 2726 |
| NmeAIII | GCCGAG | 3 cut(s) | 312, 577, 621 |
| NruI | TCGCGA | 1 cut(s) | 202 |
| NsiI | ATGCAT | 1 cut(s) | 3282 |
| NspI | RCATGY | 2 cut(s) | 1007, 1264 |
| PacI | TTAATTAA | 1 cut(s) | 2055 |
| PaeI | GCATGC | 1 cut(s) | 1007 |
| PaeR7I | CTCGAG | 1 cut(s) | 731 |
| PagI | TCATGA | 2 cut(s) | 1123, 3595 |
| PaqCI | CACCTGC | 1 cut(s) | 2227 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 227, 513 |
| PdiI | GCCGGC | 1 cut(s) | 174 |
| PdmI | GAANNNNTTC | 1 cut(s) | 826 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2071, 2137 |
| PfoI | TCCNGGA | 1 cut(s) | 2535 |
| Ple19I | CGATCG | 3 cut(s) | 482, 1483, 1502 |
| PleI | GAGTC | 6 cut(s) | 438, 492, 890, 1031, 1933, 2062 |
| PluTI | GGCGCC | 1 cut(s) | 534 |
| PmaCI | CACGTG | 1 cut(s) | 2949 |
| PmlI | CACGTG | 1 cut(s) | 2949 |
| PpsI | GAGTC | 6 cut(s) | 438, 492, 890, 1031, 1933, 2062 |
| Ppu21I | YACGTR | 1 cut(s) | 2949 |
| PpuMI | RGGWCCY | 1 cut(s) | 3572 |
| PshBI | ATTAAT | 4 cut(s) | 2106, 2172, 2246, 2646 |
| Psp124BI | GAGCTC | 1 cut(s) | 2408 |
| Psp5II | RGGWCCY | 1 cut(s) | 3572 |
| Psp6I | CCWGG | 4 cut(s) | 2122, 2188, 2419, 3232 |
| PspCI | CACGTG | 1 cut(s) | 2949 |
| PspEI | GGTNACC | 1 cut(s) | 3859 |
| PspFI | CCCAGC | 1 cut(s) | 3942 |
| PspGI | CCWGG | 4 cut(s) | 2122, 2188, 2419, 3232 |
| PspPPI | RGGWCCY | 1 cut(s) | 3572 |
| PspXI | VCTCGAGB | 1 cut(s) | 731 |
| PstI | CTGCAG | 3 cut(s) | 1107, 2383, 2923 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1739, 2071, 2705, 2717 |
| PsuI | RGATCY | 7 cut(s) | 887, 2539, 3079, 3124, 3388, 3427, 3660 |
| PvuI | CGATCG | 3 cut(s) | 482, 1483, 1502 |
| PvuII | CAGCTG | 3 cut(s) | 2429, 3458, 3815 |
| RruI | TCGCGA | 1 cut(s) | 202 |
| RsaI | GTAC | 6 cut(s) | 59, 229, 302, 2128, 2194, 2814 |
| RsaNI | GTAC | 6 cut(s) | 58, 228, 301, 2127, 2193, 2813 |
| RseI | CAYNNNNRTG | 4 cut(s) | 48, 402, 2562, 3612 |
| SacI | GAGCTC | 1 cut(s) | 2408 |
| SacII | CCGCGG | 1 cut(s) | 987 |
| SchI | GAGTC | 6 cut(s) | 439, 493, 891, 1032, 1934, 2062 |
| SduI | GDGCHC | 5 cut(s) | 411, 2408, 3349, 3839, 3910 |
| SfcI | CTRYAG | 7 cut(s) | 1103, 1156, 1465, 2379, 2706, 2919, 3312 |
| SfoI | GGCGCC | 1 cut(s) | 532 |
| Sfr274I | CTCGAG | 1 cut(s) | 731 |
| Sfr303I | CCGCGG | 1 cut(s) | 987 |
| SgrBI | CCGCGG | 1 cut(s) | 987 |
| SlaI | CTCGAG | 1 cut(s) | 731 |
| SmaI | CCCGGG | 1 cut(s) | 1452 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 48, 402, 2562, 3612 |
| SmlI | CTYRAG | 6 cut(s) | 627, 731, 1900, 2324, 2407, 3584 |
| SmoI | CTYRAG | 6 cut(s) | 627, 731, 1900, 2324, 2407, 3584 |
| SphI | GCATGC | 1 cut(s) | 1007 |
| SspDI | GGCGCC | 1 cut(s) | 530 |
| SspI | AATATT | 3 cut(s) | 2611, 2755, 3706 |
| SstI | GAGCTC | 1 cut(s) | 2408 |
| StyI | CCWWGG | 4 cut(s) | 115, 1069, 1134, 1793 |
| TaiI | ACGT | 4 cut(s) | 1626, 1639, 2031, 2951 |
| TaqII | GACCGA | 1 cut(s) | 492 |
| TauI | GCSGC | 6 cut(s) | 350, 531, 933, 986, 1464, 3232 |
| TscAI | CASTG | 8 cut(s) | 969, 1219, 1234, 1338, 1351, 1980, 2706, 3135 |
| TspDTI | ATGAA | 6 cut(s) | 352, 1112, 2543, 3153, 3624, 3702 |
| TspGWI | ACGGA | 4 cut(s) | 278, 436, 1103, 2519 |
| TspMI | CCCGGG | 1 cut(s) | 1450 |
| TspRI | CASTG | 8 cut(s) | 969, 1219, 1234, 1338, 1351, 1980, 2706, 3135 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2071, 2137 |
| Vha464I | CTTAAG | 1 cut(s) | 2324 |
| VneI | GTGCAC | 1 cut(s) | 3835 |
| VspI | ATTAAT | 4 cut(s) | 2106, 2172, 2246, 2646 |
| XapI | RAATTY | 7 cut(s) | 705, 745, 1314, 1517, 3141, 3244, 3508 |
| XbaI | TCTAGA | 2 cut(s) | 3082, 3371 |
| XceI | RCATGY | 2 cut(s) | 1007, 1264 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 748 |
| XhoI | CTCGAG | 1 cut(s) | 731 |
| XmaI | CCCGGG | 1 cut(s) | 1450 |
| XmaJI | CCTAGG | 1 cut(s) | 1793 |
| XmiI | GTMKAC | 1 cut(s) | 3530 |
| XmnI | GAANNNNTTC | 1 cut(s) | 826 |
| ZraI | GACGTC | 1 cut(s) | 2029 |
| Zsp2I | ATGCAT | 1 cut(s) | 3282 |