Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015092

Physical Location & Seq

Genomic Coordinates Reverse (-)

25976987 .. 25979370

Gene Structure 2384 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G246900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 735 bp

ATGAACTCCACCACAATACCAACAACACTTCTTTATTTCAATCCCTCTCCTGCCGCCTCCACTGAATCGTCATCAAAACGCCAAGCTCACAACCCTAGACACGTCCAATTGAAACTCGACAAACGACAAAACGGCAGGAATTTCTTATCAAAATCCATAAAATGCACCCAGAATCGCGGTATTCGAAACCCGACCGCGCTGGCTTCTTGCTTGGAGGCGACGGAGGCTCCGCCTTCGAAGGCCGCGGAGCTGGTTGCGGACAAGCTAAAACGACTCGTTTTGGAATTTAGGTCTCTGGCCGAGCCGATAGACCGCGTGAAGCGACTATTACACTACGCGGCGAGACTGCCTCCGTACAACGAGTCGACTCGGAAGCCGGAGAGCCGAGTCCCGGGCTGCTCGACTCAGGTCTGGGTCGAGGCCGAGATGGACGAGTTGGGGAGGATGAGGTTCCGAGCCGACAGCGACTCGGAGATCTCTAAGGGCTTCTGCTCGTGCCTGATTTGGATGCTGGACGGCGCGGAGGCGGCGGAGGTTTTGGAGGTCAAGACGCGAGATTTGGAGGACGTGAATGTGGGGGTGTACGGAAAGGTGAATTCGAGAGTGAACACGTGGCACAACGTGTTGTTGGCGATGCAGAGAAAGACTCAAGCTTTGGTTGTGGAGCGAGAGGGGAAGCGGCCGTTGGAGGCTTTGCCTTCTCTGCTTGCGTCCGCCAATGAGGTTAGCGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006790 GO:0008047 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009893 GO:0009987 GO:0016043 GO:0016226 GO:0019222 GO:0022607 GO:0030234 GO:0031163 GO:0031323 GO:0031325 GO:0042762 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044093 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051176 GO:0051186 GO:0065007 GO:0065009 GO:0071840 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SufE

Protein Analysis

245

Amino Acids

27.2

Weight (kDa)

9.24

Isoelectric Point (pI)

44.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015092)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G67810
fragaria_vesca	FvH4_4g25940 FvH4_4g25940
malus_domestica	MD13G1098500.v1.1 MD16G1099500.v1.1
prunus_persica	Prupe.1G246900_v2.0.a1
pyrus_communis	pycom13g08620
rosa_chinensis	RchiOBHm_Chr4g0433411
rosa_laevigata	RLG00000006755
rosa_multiflora	Rmu_sc0000759.1_g000005
rosa_roxburghii	Rroxscaffold_5G00374960
rosa_rugosa	Rorug04G0268600
rosa_samantha	Rh4BG331200 Rh4CG346500 Rh4DG327500
rosa_wichuraiana	Rw4G028010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	365
AccII	CGCG	7 cut(s)	177, 197, 245, 315, 338, 521, 553
AcoI	YGGCCR	2 cut(s)	297, 680
AcsI	RAATTY	3 cut(s)	139, 284, 595
AcvI	CACGTG	1 cut(s)	612
AdeI	CACNNNGTG	1 cut(s)	622
AfaI	GTAC	2 cut(s)	356, 584
AfiI	CCNNNNNNNGG	1 cut(s)	391
AflIII	ACRYGT	3 cut(s)	100, 609, 621
AgsI	TTSAA	2 cut(s)	40, 112
AjiI	CACGTC	2 cut(s)	103, 568
AjuI	GAANNNNNNNTTGG	2 cut(s)	668, 700
AluBI	AGCT	4 cut(s)	86, 250, 265, 653
AluI	AGCT	4 cut(s)	86, 250, 265, 653
Alw26I	GTCTC	2 cut(s)	297, 337
Ama87I	CYCGRG	1 cut(s)	391
AoxI	GGCC	4 cut(s)	240, 297, 420, 680
ApeKI	GCWGC	1 cut(s)	396
ApoI	RAATTY	3 cut(s)	139, 284, 595
ArsI	GACNNNNNNTTYG	4 cut(s)	541, 573, 637, 669
AspLEI	GCGC	2 cut(s)	199, 521
AsuC2I	CCSGG	2 cut(s)	392, 393
AsuHPI	GGTGA	1 cut(s)	604
AsuII	TTCGAA	2 cut(s)	184, 236
AvaI	CYCGRG	1 cut(s)	391
BauI	CACGAG	1 cut(s)	493
BbrPI	CACGTG	1 cut(s)	612
BbvI	GCAGC	1 cut(s)	383
BccI	CCATC	1 cut(s)	421
BceAI	ACGGC	3 cut(s)	148, 532, 667
BcnI	CCSGG	2 cut(s)	392, 393
BcoDI	GTCTC	2 cut(s)	297, 337
BfaI	CTAG	1 cut(s)	96
BglII	AGATCT	1 cut(s)	474
BisI	GCNGC	6 cut(s)	54, 243, 339, 397, 528, 680
BlsI	GCNGC	6 cut(s)	55, 244, 340, 398, 529, 681
Bme1390I	CCNGG	2 cut(s)	392, 393
BmeT110I	CYCGRG	1 cut(s)	391
BmgBI	CACGTC	2 cut(s)	103, 568
BmiI	GGNNCC	2 cut(s)	228, 452
BmrFI	CCNGG	2 cut(s)	392, 393
BmsI	GCATC	2 cut(s)	498, 624
BoxI	GACNNNNGTC	1 cut(s)	407
BplI	GAGNNNNNCTC	4 cut(s)	334, 366, 631, 663
Bpu14I	TTCGAA	2 cut(s)	184, 236
BpuEI	CTTGAG	1 cut(s)	633
BpuMI	CCSGG	2 cut(s)	392, 393
BsaAI	YACGTR	1 cut(s)	612
BsaI	GGTCTC	1 cut(s)	297
BsaJI	CCNNGG	2 cut(s)	243, 391
BsaXI	ACNNNNNCTCC	2 cut(s)	211, 241
Bsc4I	CCNNNNNNNGG	1 cut(s)	391
BseDI	CCNNGG	2 cut(s)	243, 391
BseGI	GGATG	2 cut(s)	450, 513
BseLI	CCNNNNNNNGG	1 cut(s)	391
BseMII	CTCAG	1 cut(s)	419
BseX3I	CGGCCG	1 cut(s)	680
BseXI	GCAGC	1 cut(s)	383
Bsh1236I	CGCG	7 cut(s)	177, 197, 245, 315, 338, 521, 553
Bsh1285I	CGRYCG	2 cut(s)	195, 683
BshFI	GGCC	4 cut(s)	242, 299, 422, 682
BsiEI	CGRYCG	2 cut(s)	195, 683
BsiHKCI	CYCGRG	1 cut(s)	391
BsiSI	CCGG	2 cut(s)	377, 392
BslFI	GGGAC	1 cut(s)	374
BslI	CCNNNNNNNGG	1 cut(s)	391
BsmAI	GTCTC	2 cut(s)	297, 337
BsmFI	GGGAC	1 cut(s)	374
BsnI	GGCC	4 cut(s)	242, 299, 422, 682
Bso31I	GGTCTC	1 cut(s)	297
BsoBI	CYCGRG	1 cut(s)	391
Bsp119I	TTCGAA	2 cut(s)	184, 236
Bsp143I	GATC	1 cut(s)	474
BspANI	GGCC	4 cut(s)	242, 299, 422, 682
BspCNI	CTCAG	1 cut(s)	418
BspFNI	CGCG	7 cut(s)	177, 197, 245, 315, 338, 521, 553
BspLI	GGNNCC	2 cut(s)	228, 452
BspT104I	TTCGAA	2 cut(s)	184, 236
BspTNI	GGTCTC	1 cut(s)	297
BssECI	CCNNGG	2 cut(s)	243, 391
BssMI	GATC	1 cut(s)	474
BssSI	CACGAG	1 cut(s)	493
Bst2BI	CACGAG	1 cut(s)	493
BstBAI	YACGTR	1 cut(s)	612
BstBI	TTCGAA	2 cut(s)	184, 236
BstC8I	GCNNGC	2 cut(s)	201, 708
BstDEI	CTNAG	2 cut(s)	405, 480
BstDSI	CCRYGG	1 cut(s)	243
BstF5I	GGATG	2 cut(s)	450, 513
BstFNI	CGCG	7 cut(s)	177, 197, 245, 315, 338, 521, 553
BstHHI	GCGC	2 cut(s)	199, 521
BstKTI	GATC	1 cut(s)	477
BstMAI	GTCTC	2 cut(s)	297, 337
BstMBI	GATC	1 cut(s)	474
BstMCI	CGRYCG	2 cut(s)	195, 683
BstMWI	GCNNNNNNNGC	3 cut(s)	224, 527, 703
BstPAI	GACNNNNGTC	1 cut(s)	407
BstSCI	CCNGG	2 cut(s)	390, 391
BstUI	CGCG	7 cut(s)	177, 197, 245, 315, 338, 521, 553
BstV1I	GCAGC	1 cut(s)	383
BstX2I	RGATCY	1 cut(s)	474
BstYI	RGATCY	1 cut(s)	474
BstZI	CGGCCG	1 cut(s)	680
BsuRI	GGCC	4 cut(s)	242, 299, 422, 682
BtgI	CCRYGG	1 cut(s)	243
BtgZI	GCGATG	1 cut(s)	647
BtrI	CACGTC	2 cut(s)	103, 568
BtsCI	GGATG	2 cut(s)	450, 513
BtsIMutI	CAGTG	1 cut(s)	60
Cac8I	GCNNGC	2 cut(s)	201, 708
CfoI	GCGC	2 cut(s)	199, 521
Cfr42I	CCGCGG	1 cut(s)	246
Cfr9I	CCCGGG	1 cut(s)	391
CseI	GACGC	2 cut(s)	559, 699
Csp6I	GTAC	2 cut(s)	355, 583
CviQI	GTAC	2 cut(s)	355, 583
DdeI	CTNAG	2 cut(s)	405, 480
DpnI	GATC	1 cut(s)	476
DpnII	GATC	1 cut(s)	474
DraIII	CACNNNGTG	1 cut(s)	622
EaeI	YGGCCR	2 cut(s)	297, 680
EagI	CGGCCG	1 cut(s)	680
EciI	GGCGGA	3 cut(s)	219, 545, 703
EclXI	CGGCCG	1 cut(s)	680
Eco31I	GGTCTC	1 cut(s)	297
Eco52I	CGGCCG	1 cut(s)	680
Eco72I	CACGTG	1 cut(s)	612
Eco88I	CYCGRG	1 cut(s)	391
EcoRI	GAATTC	1 cut(s)	595
FaiI	YATR	1 cut(s)	158
FaqI	GGGAC	1 cut(s)	374
FblI	GTMKAC	1 cut(s)	365
Fnu4HI	GCNGC	6 cut(s)	54, 243, 339, 397, 528, 680
FokI	GGATG	2 cut(s)	457, 520
Fsp4HI	GCNGC	6 cut(s)	54, 243, 339, 397, 528, 680
FspBI	CTAG	1 cut(s)	96
GlaI	GCGC	2 cut(s)	198, 520
GluI	GCNGC	6 cut(s)	54, 243, 339, 397, 528, 680
HaeIII	GGCC	4 cut(s)	242, 299, 422, 682
HapII	CCGG	2 cut(s)	377, 392
HgaI	GACGC	2 cut(s)	559, 699
HhaI	GCGC	2 cut(s)	199, 521
Hin6I	GCGC	2 cut(s)	197, 519
HinP1I	GCGC	2 cut(s)	197, 519
HincII	GTYRAC	1 cut(s)	366
HindII	GTYRAC	1 cut(s)	366
HindIII	AAGCTT	1 cut(s)	651
HinfI	GANTC	9 cut(s)	65, 172, 273, 362, 367, 387, 403, 467, 646
HpaII	CCGG	2 cut(s)	377, 392
HphI	GGTGA	1 cut(s)	604
Hpy166II	GTNNAC	3 cut(s)	366, 583, 607
Hpy188I	TCNGA	3 cut(s)	372, 455, 472
Hpy188III	TCNNGA	2 cut(s)	547, 600
Hpy8I	GTNNAC	3 cut(s)	366, 583, 607
Hpy99I	CGWCG	1 cut(s)	223
HpyAV	CCTTC	3 cut(s)	232, 243, 708
HpyCH4IV	ACGT	4 cut(s)	102, 567, 611, 621
HpyCH4V	TGCA	2 cut(s)	165, 637
HpyF10VI	GCNNNNNNNGC	3 cut(s)	224, 527, 703
HpyF3I	CTNAG	2 cut(s)	405, 480
HpySE526I	ACGT	4 cut(s)	102, 567, 611, 621
HspAI	GCGC	2 cut(s)	197, 519
KspI	CCGCGG	1 cut(s)	246
Kzo9I	GATC	1 cut(s)	474
LmnI	GCTCC	3 cut(s)	232, 247, 664
Lsp1109I	GCAGC	1 cut(s)	383
LweI	GCATC	2 cut(s)	498, 624
MaeI	CTAG	1 cut(s)	96
MaeII	ACGT	4 cut(s)	102, 567, 611, 621
MalI	GATC	1 cut(s)	476
MboI	GATC	1 cut(s)	474
MfeI	CAATTG	1 cut(s)	107
MflI	RGATCY	1 cut(s)	474
MluCI	AATT	4 cut(s)	107, 139, 284, 595
MlyI	GAGTC	7 cut(s)	267, 361, 371, 396, 397, 461, 640
MmeI	TCCRAC	1 cut(s)	666
MseI	TTAA	1 cut(s)	733
MspA1I	CMGCKG	1 cut(s)	245
MspI	CCGG	2 cut(s)	377, 392
MspR9I	CCNGG	2 cut(s)	392, 393
MunI	CAATTG	1 cut(s)	107
MvnI	CGCG	7 cut(s)	177, 197, 245, 315, 338, 521, 553
MwoI	GCNNNNNNNGC	3 cut(s)	224, 527, 703
NciI	CCSGG	2 cut(s)	392, 393
NdeII	GATC	1 cut(s)	474
NlaIV	GGNNCC	2 cut(s)	228, 452
NmeAIII	GCCGAG	3 cut(s)	325, 410, 448
NspV	TTCGAA	2 cut(s)	184, 236
PcsI	WCGNNNNNNNCGW	1 cut(s)	181
PfeI	GAWTC	2 cut(s)	65, 172
PkrI	GCNGC	6 cut(s)	55, 244, 340, 398, 529, 681
PleI	GAGTC	7 cut(s)	267, 361, 370, 395, 397, 461, 640
PmaCI	CACGTG	1 cut(s)	612
PmlI	CACGTG	1 cut(s)	612
PpsI	GAGTC	7 cut(s)	267, 361, 370, 395, 397, 461, 640
Ppu21I	YACGTR	1 cut(s)	612
PshAI	GACNNNNGTC	1 cut(s)	407
PspCI	CACGTG	1 cut(s)	612
PspN4I	GGNNCC	2 cut(s)	228, 452
PsuI	RGATCY	1 cut(s)	474
RsaI	GTAC	2 cut(s)	356, 584
RsaNI	GTAC	2 cut(s)	355, 583
SacII	CCGCGG	1 cut(s)	246
SalI	GTCGAC	1 cut(s)	364
SaqAI	TTAA	1 cut(s)	733
SatI	GCNGC	6 cut(s)	54, 243, 339, 397, 528, 680
Sau3AI	GATC	1 cut(s)	474
SchI	GAGTC	7 cut(s)	267, 361, 371, 396, 397, 461, 640
ScrFI	CCNGG	2 cut(s)	392, 393
SfaNI	GCATC	2 cut(s)	498, 624
Sfr303I	CCGCGG	1 cut(s)	246
SfuI	TTCGAA	2 cut(s)	184, 236
SgrBI	CCGCGG	1 cut(s)	246
SmaI	CCCGGG	1 cut(s)	393
SmlI	CTYRAG	1 cut(s)	648
SmoI	CTYRAG	1 cut(s)	648
Sse9I	AATT	4 cut(s)	107, 139, 284, 595
SspMI	CTAG	1 cut(s)	96
StyD4I	CCNGG	2 cut(s)	390, 391
TaiI	ACGT	4 cut(s)	105, 570, 614, 624
TaqI	TCGA	7 cut(s)	117, 184, 236, 365, 401, 417, 599
TasI	AATT	4 cut(s)	107, 139, 284, 595
TauI	GCSGC	5 cut(s)	56, 245, 341, 530, 682
TfiI	GAWTC	2 cut(s)	65, 172
Tru1I	TTAA	1 cut(s)	733
Tru9I	TTAA	1 cut(s)	733
TscAI	CASTG	1 cut(s)	67
TseI	GCWGC	1 cut(s)	396
TspDTI	ATGAA	1 cut(s)	17
TspGWI	ACGGA	3 cut(s)	236, 342, 600
TspMI	CCCGGG	1 cut(s)	391
TspRI	CASTG	1 cut(s)	67
XapI	RAATTY	3 cut(s)	139, 284, 595
XmaI	CCCGGG	1 cut(s)	391
XmiI	GTMKAC	1 cut(s)	365
XspI	CTAG	1 cut(s)	96

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.