Prupe.1G261600_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
27038740 .. 27039707
968 bp
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UTR
Exon/CDS
Intron
Prupe.1G261600.1

Sequence Viewer

Length: 207 bp
ATGAGCTACAATCTGAAATTTAGCTGGATTGACACCATGGCTGACAACTATCCTCCTCCTCTTGATACTTACTTGGTTGTTTCTGTCATGTCTATGTGGACGAGGATGCAGCCTGCTTATGCTGCAAACATGTGGAATGAAGCTCTCAACAAGCGGCTGGGGACAGAGCAGCAGGAGCAGGAGCAGCAGCAGCAGTATCAGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

8.15

Weight (kDa)

4.7

Isoelectric Point (pI)

67.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 154
AcsI RAATTY 1 cut(s) 17
AflIII ACRYGT 1 cut(s) 129
AluBI AGCT 3 cut(s) 6, 24, 143
AluI AGCT 3 cut(s) 6, 24, 143
ApeKI GCWGC 6 cut(s) 109, 122, 169, 184, 187, 190
ApoI RAATTY 1 cut(s) 17
BbvI GCAGC 6 cut(s) 109, 121, 181, 196, 199, 202
BfaI CTAG 1 cut(s) 205
BisI GCNGC 7 cut(s) 110, 123, 155, 170, 185, 188, 191
BlsI GCNGC 7 cut(s) 111, 124, 156, 171, 186, 189, 192
BmsI GCATC 1 cut(s) 96
BsaJI CCNNGG 1 cut(s) 36
BseDI CCNNGG 1 cut(s) 36
BseGI GGATG 1 cut(s) 111
BseRI GAGGAG 2 cut(s) 45, 48
BseXI GCAGC 6 cut(s) 109, 121, 181, 196, 199, 202
BseYI CCCAGC 1 cut(s) 157
BslFI GGGAC 1 cut(s) 175
BsmFI GGGAC 1 cut(s) 175
Bsp19I CCATGG 1 cut(s) 36
BspACI CCGC 1 cut(s) 154
BssECI CCNNGG 1 cut(s) 36
BssT1I CCWWGG 1 cut(s) 36
BstC8I GCNNGC 1 cut(s) 114
BstDSI CCRYGG 1 cut(s) 36
BstF5I GGATG 1 cut(s) 111
BstMWI GCNNNNNNNGC 5 cut(s) 122, 175, 184, 190, 199
BstNSI RCATGY 1 cut(s) 133
BstV1I GCAGC 6 cut(s) 109, 121, 181, 196, 199, 202
BtgI CCRYGG 1 cut(s) 36
BtsCI GGATG 1 cut(s) 111
Cac8I GCNNGC 1 cut(s) 114
CviAII CATG 3 cut(s) 37, 88, 130
CviJI RGCY 6 cut(s) 6, 24, 41, 112, 143, 157
CviKI_1 RGCY 6 cut(s) 6, 24, 41, 112, 143, 157
Eco130I CCWWGG 1 cut(s) 36
EcoT14I CCWWGG 1 cut(s) 36
ErhI CCWWGG 1 cut(s) 36
FaeI CATG 3 cut(s) 40, 91, 133
FaiI YATR 5 cut(s) 38, 89, 95, 120, 131
FaqI GGGAC 1 cut(s) 175
FatI CATG 3 cut(s) 36, 87, 129
Fnu4HI GCNGC 7 cut(s) 110, 123, 155, 170, 185, 188, 191
FokI GGATG 1 cut(s) 118
Fsp4HI GCNGC 7 cut(s) 110, 123, 155, 170, 185, 188, 191
FspBI CTAG 1 cut(s) 205
GluI GCNGC 7 cut(s) 110, 123, 155, 170, 185, 188, 191
GsaI CCCAGC 1 cut(s) 161
Hin1II CATG 3 cut(s) 40, 91, 133
Hpy166II GTNNAC 1 cut(s) 99
Hpy188I TCNGA 1 cut(s) 15
Hpy188III TCNNGA 1 cut(s) 62
Hpy8I GTNNAC 1 cut(s) 99
HpyCH4V TGCA 2 cut(s) 109, 125
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 175, 184, 190, 199
Hsp92II CATG 3 cut(s) 40, 91, 133
LmnI GCTCC 2 cut(s) 175, 181
LpnPI CCDG 5 cut(s) 10, 126, 143, 158, 164
Lsp1109I GCAGC 6 cut(s) 109, 121, 181, 196, 199, 202
LweI GCATC 1 cut(s) 96
MaeI CTAG 1 cut(s) 205
MluCI AATT 1 cut(s) 17
MnlI CCTC 4 cut(s) 63, 66, 69, 96
MslI CAYNNNNRTG 1 cut(s) 92
MwoI GCNNNNNNNGC 5 cut(s) 122, 175, 184, 190, 199
NcoI CCATGG 1 cut(s) 36
NlaIII CATG 3 cut(s) 40, 91, 133
NspI RCATGY 1 cut(s) 133
PciI ACATGT 1 cut(s) 129
PkrI GCNGC 7 cut(s) 111, 124, 156, 171, 186, 189, 192
PscI ACATGT 1 cut(s) 129
PspFI CCCAGC 1 cut(s) 157
RseI CAYNNNNRTG 1 cut(s) 92
SatI GCNGC 7 cut(s) 110, 123, 155, 170, 185, 188, 191
SetI ASST 3 cut(s) 8, 26, 145
SfaNI GCATC 1 cut(s) 96
SmiMI CAYNNNNRTG 1 cut(s) 92
Sse9I AATT 1 cut(s) 17
SsiI CCGC 1 cut(s) 154
SspMI CTAG 1 cut(s) 205
StyI CCWWGG 1 cut(s) 36
TasI AATT 1 cut(s) 17
TauI GCSGC 1 cut(s) 157
TseI GCWGC 6 cut(s) 109, 122, 169, 184, 187, 190
TspDTI ATGAA 1 cut(s) 153
XapI RAATTY 1 cut(s) 17
XceI RCATGY 1 cut(s) 133
XspI CTAG 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.