Rh1AG186900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
35690326 .. 35690705
380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG186900.1

Sequence Viewer

Length: 276 bp
ATGTATAAAGAAGCTGGGATTTTTGGTCCTATTTCAAACTCCATTCGAGTTACTGAATTCACTATTTGTGATGCGTACATGCTAAAGATTTTTGAGGATAACCAGACCCGTTTGCCAAGTTGGTGTAACATAGGGGATGAAAAGCTCCCATTCTGCCAGATCCTTGGTGAATATCTTATGGAACTGCCTGAATATAACAGCATAGAGCCATATGCAAACATGAATGAGCACTGTGAATCACAAAGACGACACGAAGAGGATTTGCTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

91

Amino Acids

10.7

Weight (kDa)

4.4

Isoelectric Point (pI)

63.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 154
AcsI RAATTY 1 cut(s) 56
AfaI GTAC 1 cut(s) 77
AgsI TTSAA 1 cut(s) 36
AluBI AGCT 2 cut(s) 14, 145
AluI AGCT 2 cut(s) 14, 145
Alw21I GWGCWC 1 cut(s) 231
AlwI GGATC 1 cut(s) 154
ApoI RAATTY 1 cut(s) 56
AspS9I GGNCC 2 cut(s) 26, 268
AsuHPI GGTGA 1 cut(s) 179
AvaII GGWCC 2 cut(s) 26, 268
Bbv12I GWGCWC 1 cut(s) 231
Bme18I GGWCC 2 cut(s) 26, 268
BmgT120I GGNCC 2 cut(s) 26, 268
BmiI GGNNCC 1 cut(s) 270
BmsI GCATC 1 cut(s) 61
BsaJI CCNNGG 1 cut(s) 163
BseDI CCNNGG 1 cut(s) 163
BseGI GGATG 1 cut(s) 142
BseYI CCCAGC 1 cut(s) 14
BsiHKAI GWGCWC 1 cut(s) 231
Bsp1286I GDGCHC 1 cut(s) 231
Bsp143I GATC 1 cut(s) 159
BspLI GGNNCC 1 cut(s) 270
BspPI GGATC 1 cut(s) 154
BssECI CCNNGG 1 cut(s) 163
BssMI GATC 1 cut(s) 159
BssT1I CCWWGG 1 cut(s) 163
Bst4CI ACNGT 1 cut(s) 233
Bst6I CTCTTC 1 cut(s) 249
BstF5I GGATG 1 cut(s) 142
BstKTI GATC 1 cut(s) 162
BstMBI GATC 1 cut(s) 159
BstNSI RCATGY 1 cut(s) 82
BstX2I RGATCY 1 cut(s) 159
BstXI CCANNNNNNTGG 1 cut(s) 164
BstYI RGATCY 1 cut(s) 159
BtsCI GGATG 1 cut(s) 142
BtsIMutI CAGTG 1 cut(s) 229
Cfr13I GGNCC 2 cut(s) 26, 268
Csp6I GTAC 1 cut(s) 76
CviAII CATG 2 cut(s) 79, 220
CviJI RGCY 3 cut(s) 14, 145, 208
CviKI_1 RGCY 3 cut(s) 14, 145, 208
CviQI GTAC 1 cut(s) 76
DpnI GATC 1 cut(s) 161
DpnII GATC 1 cut(s) 159
Eam1104I CTCTTC 1 cut(s) 249
EarI CTCTTC 1 cut(s) 249
Eco130I CCWWGG 1 cut(s) 163
Eco47I GGWCC 2 cut(s) 26, 268
EcoRI GAATTC 1 cut(s) 56
EcoT14I CCWWGG 1 cut(s) 163
ErhI CCWWGG 1 cut(s) 163
FaeI CATG 2 cut(s) 82, 223
FatI CATG 2 cut(s) 78, 219
FauNDI CATATG 1 cut(s) 211
FokI GGATG 1 cut(s) 149
GsaI CCCAGC 1 cut(s) 18
Hin1II CATG 2 cut(s) 82, 223
HinfI GANTC 1 cut(s) 236
HphI GGTGA 1 cut(s) 179
HpyCH4III ACNGT 1 cut(s) 233
HpyCH4V TGCA 1 cut(s) 215
Hsp92II CATG 2 cut(s) 82, 223
Kzo9I GATC 1 cut(s) 159
LmnI GCTCC 1 cut(s) 150
LpnPI CCDG 4 cut(s) 116, 170, 201, 251
LweI GCATC 1 cut(s) 61
MaeIII GTNAC 2 cut(s) 49, 125
MalI GATC 1 cut(s) 161
MboI GATC 1 cut(s) 159
MboII GAAGA 1 cut(s) 266
MflI RGATCY 1 cut(s) 159
MhlI GDGCHC 1 cut(s) 231
MluCI AATT 1 cut(s) 56
MnlI CCTC 2 cut(s) 88, 250
NdeI CATATG 1 cut(s) 211
NdeII GATC 1 cut(s) 159
NlaIII CATG 2 cut(s) 82, 223
NlaIV GGNNCC 1 cut(s) 270
NspI RCATGY 1 cut(s) 82
PfeI GAWTC 1 cut(s) 236
PspFI CCCAGC 1 cut(s) 14
PspN4I GGNNCC 1 cut(s) 270
PspPI GGNCC 2 cut(s) 26, 268
PsuI RGATCY 1 cut(s) 159
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
Sau3AI GATC 1 cut(s) 159
Sau96I GGNCC 2 cut(s) 26, 268
SduI GDGCHC 1 cut(s) 231
SetI ASST 2 cut(s) 16, 147
SfaNI GCATC 1 cut(s) 61
SinI GGWCC 2 cut(s) 26, 268
Sse9I AATT 1 cut(s) 56
StyI CCWWGG 1 cut(s) 163
TaaI ACNGT 1 cut(s) 233
TaqI TCGA 1 cut(s) 46
TasI AATT 1 cut(s) 56
TfiI GAWTC 1 cut(s) 236
TscAI CASTG 1 cut(s) 236
TspDTI ATGAA 2 cut(s) 153, 236
TspRI CASTG 1 cut(s) 236
VpaK11BI GGWCC 2 cut(s) 26, 268
XapI RAATTY 1 cut(s) 56
XceI RCATGY 1 cut(s) 82
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.