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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17900 AT3G17900 |
| fragaria_vesca | FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 |
| malus_domestica | MD13G1079000.v1.1 MD16G1078700.v1.1 |
| prunus_persica | Prupe.1G267800_v2.0.a1 Prupe.1G267800_v2.0.a1 |
| pyrus_communis | pycom13g06860 pycom16g06810 |
| rosa_chinensis | RchiOBHm_Chr1g0331861 RchiOBHm_Chr1g0331881 RchiOBHm_Chr1g0353921 RchiOBHm_Chr4g0440641 |
| rosa_laevigata | RLG00000006164 RLG00000029707 |
| rosa_multiflora | Rmu_co8243009.1_g000001 Rmu_sc0001915.1_g000004 Rmu_sc0005552.1_g000001 Rmu_sc0007658.1_g000002 Rmu_sc0008018.1_g000005 |
| rosa_roxburghii | Rroxscaffold_4G00301470 Rroxscaffold_5G00381450 |
| rosa_rugosa | Rorug01G0239400 Rorug04G0327100 |
| rosa_samantha | Rh1AG250900 Rh1BG221700 Rh1CG234700 Rh1DG248700 Rh4AG379000 Rh4BG391800 Rh4CG406300 |
| rosa_wichuraiana | Rw1G021890 Rw4G032550 Rw4G032590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 124, 1306 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 769 |
| Acc36I | ACCTGC | 2 cut(s) | 124, 1306 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2222, 2446 |
| AccBSI | CCGCTC | 1 cut(s) | 387 |
| AciI | CCGC | 4 cut(s) | 61, 385, 1157, 1314 |
| AclWI | GGATC | 4 cut(s) | 690, 899, 1359, 2016 |
| AcoI | YGGCCR | 1 cut(s) | 2324 |
| AcsI | RAATTY | 3 cut(s) | 49, 898, 2188 |
| AcuI | CTGAAG | 8 cut(s) | 192, 558, 783, 1019, 2084, 2157, 2390, 2579 |
| AcvI | CACGTG | 1 cut(s) | 1997 |
| AdeI | CACNNNGTG | 1 cut(s) | 2060 |
| AfaI | GTAC | 3 cut(s) | 75, 2392, 2552 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 2063, 2064, 2222, 2378, 2446 |
| AflIII | ACRYGT | 2 cut(s) | 79, 1996 |
| AjnI | CCWGG | 1 cut(s) | 1480 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 228, 260 |
| AleI | CACNNNNGTG | 1 cut(s) | 2398 |
| AluBI | AGCT | 9 cut(s) | 437, 479, 1166, 2077, 2153, 2271, 2330, 2461, 2467 |
| AluI | AGCT | 9 cut(s) | 437, 479, 1166, 2077, 2153, 2271, 2330, 2461, 2467 |
| Alw21I | GWGCWC | 2 cut(s) | 787, 2056 |
| Alw26I | GTCTC | 8 cut(s) | 732, 755, 873, 919, 960, 1067, 2074, 2185 |
| Alw44I | GTGCAC | 1 cut(s) | 2052 |
| AlwI | GGATC | 4 cut(s) | 690, 899, 1359, 2016 |
| AoxI | GGCC | 1 cut(s) | 2324 |
| ApaLI | GTGCAC | 1 cut(s) | 2052 |
| ApeKI | GCWGC | 5 cut(s) | 479, 482, 1541, 1850, 1990 |
| ApoI | RAATTY | 3 cut(s) | 49, 898, 2188 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 17, 49, 374, 406, 2102, 2134 |
| AseI | ATTAAT | 1 cut(s) | 2565 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 411, 666 |
| AspS9I | GGNCC | 2 cut(s) | 382, 1105 |
| AsuC2I | CCSGG | 1 cut(s) | 402 |
| AsuHPI | GGTGA | 9 cut(s) | 119, 245, 416, 620, 1757, 1820, 2187, 2196, 2265 |
| AvaII | GGWCC | 2 cut(s) | 382, 1105 |
| AxyI | CCTNAGG | 1 cut(s) | 1736 |
| BaeGI | GKGCMC | 1 cut(s) | 2056 |
| BalI | TGGCCA | 1 cut(s) | 2326 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2236, 2268 |
| BauI | CACGAG | 1 cut(s) | 1050 |
| BbrPI | CACGTG | 1 cut(s) | 1997 |
| BbsI | GAAGAC | 3 cut(s) | 635, 1059, 1350 |
| Bbv12I | GWGCWC | 2 cut(s) | 787, 2056 |
| BbvI | GCAGC | 5 cut(s) | 466, 494, 1528, 1862, 2002 |
| BccI | CCATC | 6 cut(s) | 300, 808, 812, 1879, 2462, 2477 |
| BciT130I | CCWGG | 1 cut(s) | 1482 |
| BciVI | GTATCC | 1 cut(s) | 442 |
| BclI | TGATCA | 2 cut(s) | 205, 1912 |
| BcnI | CCSGG | 1 cut(s) | 402 |
| BcoDI | GTCTC | 8 cut(s) | 732, 755, 873, 919, 960, 1067, 2074, 2185 |
| BfaI | CTAG | 4 cut(s) | 1730, 2049, 2373, 2423 |
| BfmI | CTRYAG | 4 cut(s) | 117, 480, 1521, 1835 |
| BfuAI | ACCTGC | 2 cut(s) | 124, 1306 |
| BfuI | GTATCC | 1 cut(s) | 442 |
| BglII | AGATCT | 1 cut(s) | 2125 |
| BisI | GCNGC | 6 cut(s) | 480, 483, 1314, 1542, 1851, 1991 |
| BlpI | GCTNAGC | 1 cut(s) | 2267 |
| BlsI | GCNGC | 6 cut(s) | 481, 484, 1315, 1543, 1852, 1992 |
| BmcAI | AGTACT | 1 cut(s) | 2552 |
| Bme1390I | CCNGG | 2 cut(s) | 402, 1482 |
| Bme18I | GGWCC | 2 cut(s) | 382, 1105 |
| BmgT120I | GGNCC | 2 cut(s) | 382, 1105 |
| BmiI | GGNNCC | 2 cut(s) | 844, 1107 |
| BmrFI | CCNGG | 2 cut(s) | 402, 1482 |
| BmrI | ACTGGG | 2 cut(s) | 2052, 2598 |
| BmsI | GCATC | 8 cut(s) | 112, 340, 1084, 1618, 1862, 2036, 2353, 2417 |
| BmuI | ACTGGG | 2 cut(s) | 2052, 2598 |
| BpiI | GAAGAC | 3 cut(s) | 635, 1059, 1350 |
| BpmI | CTGGAG | 4 cut(s) | 1146, 1464, 1578, 2133 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2267 |
| BpuEI | CTTGAG | 2 cut(s) | 1781, 2483 |
| BpuMI | CCSGG | 1 cut(s) | 402 |
| Bsa29I | ATCGAT | 1 cut(s) | 201 |
| BsaAI | YACGTR | 1 cut(s) | 1997 |
| BsaBI | GATNNNNATC | 3 cut(s) | 180, 1098, 1350 |
| BsaI | GGTCTC | 3 cut(s) | 732, 2074, 2185 |
| BsaJI | CCNNGG | 1 cut(s) | 400 |
| BsaWI | WCCGGW | 1 cut(s) | 2545 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 957, 987 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 2063, 2064, 2222, 2378, 2446 |
| Bse118I | RCCGGY | 1 cut(s) | 1771 |
| Bse1I | ACTGG | 5 cut(s) | 1317, 1396, 2058, 2502, 2593 |
| Bse21I | CCTNAGG | 1 cut(s) | 1736 |
| Bse8I | GATNNNNATC | 3 cut(s) | 180, 1098, 1350 |
| BseBI | CCWGG | 1 cut(s) | 1482 |
| BseCI | ATCGAT | 1 cut(s) | 201 |
| BseDI | CCNNGG | 1 cut(s) | 400 |
| BseGI | GGATG | 6 cut(s) | 311, 652, 819, 823, 1778, 2432 |
| BseJI | GATNNNNATC | 3 cut(s) | 180, 1098, 1350 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 2063, 2064, 2222, 2378, 2446 |
| BseMII | CTCAG | 7 cut(s) | 1062, 1091, 1379, 1750, 1944, 2087, 2223 |
| BseNI | ACTGG | 5 cut(s) | 1317, 1396, 2058, 2502, 2593 |
| BseRI | GAGGAG | 5 cut(s) | 314, 1170, 1510, 1664, 1909 |
| BseSI | GKGCMC | 1 cut(s) | 2056 |
| BseXI | GCAGC | 5 cut(s) | 466, 494, 1528, 1862, 2002 |
| BsgI | GTGCAG | 2 cut(s) | 615, 1284 |
| BshFI | GGCC | 1 cut(s) | 2326 |
| BshVI | ATCGAT | 1 cut(s) | 201 |
| BsiHKAI | GWGCWC | 2 cut(s) | 787, 2056 |
| BsiSI | CCGG | 3 cut(s) | 402, 1772, 2546 |
| BslFI | GGGAC | 1 cut(s) | 55 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 2063, 2064, 2222, 2378, 2446 |
| BsmAI | GTCTC | 8 cut(s) | 732, 755, 873, 919, 960, 1067, 2074, 2185 |
| BsmFI | GGGAC | 1 cut(s) | 55 |
| BsmI | GAATGC | 1 cut(s) | 1753 |
| BsnI | GGCC | 1 cut(s) | 2326 |
| Bso31I | GGTCTC | 3 cut(s) | 732, 2074, 2185 |
| Bsp1286I | GDGCHC | 2 cut(s) | 787, 2056 |
| Bsp1407I | TGTACA | 2 cut(s) | 73, 2390 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2267 |
| BspACI | CCGC | 4 cut(s) | 61, 385, 1157, 1314 |
| BspANI | GGCC | 1 cut(s) | 2326 |
| BspCNI | CTCAG | 7 cut(s) | 1063, 1090, 1378, 1749, 1945, 2086, 2224 |
| BspDI | ATCGAT | 1 cut(s) | 201 |
| BspLI | GGNNCC | 2 cut(s) | 844, 1107 |
| BspMAI | CTGCAG | 3 cut(s) | 121, 484, 1839 |
| BspMI | ACCTGC | 2 cut(s) | 124, 1306 |
| BspPI | GGATC | 4 cut(s) | 690, 899, 1359, 2016 |
| BspQI | GCTCTTC | 1 cut(s) | 1743 |
| BspTNI | GGTCTC | 3 cut(s) | 732, 2074, 2185 |
| BsrBI | CCGCTC | 1 cut(s) | 387 |
| BsrFI | RCCGGY | 1 cut(s) | 1771 |
| BsrGI | TGTACA | 2 cut(s) | 73, 2390 |
| BsrI | ACTGG | 5 cut(s) | 1317, 1396, 2058, 2502, 2593 |
| BssAI | RCCGGY | 1 cut(s) | 1771 |
| BssECI | CCNNGG | 1 cut(s) | 400 |
| BssSI | CACGAG | 1 cut(s) | 1050 |
| Bst2BI | CACGAG | 1 cut(s) | 1050 |
| Bst2UI | CCWGG | 1 cut(s) | 1482 |
| Bst4CI | ACNGT | 4 cut(s) | 99, 587, 1718, 2140 |
| Bst6I | CTCTTC | 5 cut(s) | 534, 1244, 1373, 1743, 2103 |
| BstAUI | TGTACA | 2 cut(s) | 73, 2390 |
| BstBAI | YACGTR | 1 cut(s) | 1997 |
| BstC8I | GCNNGC | 4 cut(s) | 427, 1168, 1839, 2328 |
| BstF5I | GGATG | 6 cut(s) | 311, 652, 819, 823, 1778, 2432 |
| BstMAI | GTCTC | 8 cut(s) | 732, 755, 873, 919, 960, 1067, 2074, 2185 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 248, 1847, 1907 |
| BstNI | CCWGG | 1 cut(s) | 1482 |
| BstNSI | RCATGY | 3 cut(s) | 429, 1604, 1695 |
| BstSCI | CCNGG | 2 cut(s) | 400, 1480 |
| BstSFI | CTRYAG | 4 cut(s) | 117, 480, 1521, 1835 |
| BstSLI | GKGCMC | 1 cut(s) | 2056 |
| BstV1I | GCAGC | 5 cut(s) | 466, 494, 1528, 1862, 2002 |
| BstV2I | GAAGAC | 3 cut(s) | 635, 1059, 1350 |
| BstX2I | RGATCY | 2 cut(s) | 2008, 2125 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 13, 1986 |
| BstYI | RGATCY | 2 cut(s) | 2008, 2125 |
| Bsu15I | ATCGAT | 1 cut(s) | 201 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1736 |
| BsuI | GTATCC | 1 cut(s) | 442 |
| BsuRI | GGCC | 1 cut(s) | 2326 |
| BsuTUI | ATCGAT | 1 cut(s) | 201 |
| BtsCI | GGATG | 6 cut(s) | 311, 652, 819, 823, 1778, 2432 |
| BtsIMutI | CAGTG | 5 cut(s) | 1950, 2065, 2181, 2495, 2555 |
| BveI | ACCTGC | 2 cut(s) | 124, 1306 |
| Cac8I | GCNNGC | 4 cut(s) | 427, 1168, 1839, 2328 |
| Cfr10I | RCCGGY | 1 cut(s) | 1771 |
| Cfr13I | GGNCC | 2 cut(s) | 382, 1105 |
| ClaI | ATCGAT | 1 cut(s) | 201 |
| CseI | GACGC | 1 cut(s) | 1853 |
| Csp6I | GTAC | 3 cut(s) | 74, 2391, 2551 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1786, 1821 |
| CviAII | CATG | 9 cut(s) | 71, 209, 426, 487, 1110, 1264, 1601, 1692, 1935 |
| CviQI | GTAC | 3 cut(s) | 74, 2391, 2551 |
| DraI | TTTAAA | 1 cut(s) | 472 |
| DraIII | CACNNNGTG | 1 cut(s) | 2060 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 769 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 769 |
| EaeI | YGGCCR | 1 cut(s) | 2324 |
| Eam1104I | CTCTTC | 5 cut(s) | 534, 1244, 1373, 1743, 2103 |
| EarI | CTCTTC | 5 cut(s) | 534, 1244, 1373, 1743, 2103 |
| EciI | GGCGGA | 1 cut(s) | 1146 |
| Eco31I | GGTCTC | 3 cut(s) | 732, 2074, 2185 |
| Eco47I | GGWCC | 2 cut(s) | 382, 1105 |
| Eco57I | CTGAAG | 8 cut(s) | 192, 558, 783, 1019, 2084, 2157, 2390, 2579 |
| Eco72I | CACGTG | 1 cut(s) | 1997 |
| Eco81I | CCTNAGG | 1 cut(s) | 1736 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1105 |
| EcoRI | GAATTC | 1 cut(s) | 2188 |
| EcoRII | CCWGG | 1 cut(s) | 1480 |
| FaeI | CATG | 9 cut(s) | 74, 212, 429, 490, 1113, 1267, 1604, 1695, 1938 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1051, 1083, 1316, 1348 |
| FaqI | GGGAC | 1 cut(s) | 55 |
| FatI | CATG | 9 cut(s) | 70, 208, 425, 486, 1109, 1263, 1600, 1691, 1934 |
| FbaI | TGATCA | 2 cut(s) | 205, 1912 |
| Fnu4HI | GCNGC | 6 cut(s) | 480, 483, 1314, 1542, 1851, 1991 |
| FokI | GGATG | 6 cut(s) | 318, 659, 826, 830, 1765, 2439 |
| Fsp4HI | GCNGC | 6 cut(s) | 480, 483, 1314, 1542, 1851, 1991 |
| FspBI | CTAG | 4 cut(s) | 1730, 2049, 2373, 2423 |
| GluI | GCNGC | 6 cut(s) | 480, 483, 1314, 1542, 1851, 1991 |
| GsuI | CTGGAG | 4 cut(s) | 1146, 1464, 1578, 2133 |
| HaeIII | GGCC | 1 cut(s) | 2326 |
| HapII | CCGG | 3 cut(s) | 402, 1772, 2546 |
| HgaI | GACGC | 1 cut(s) | 1853 |
| Hin1II | CATG | 9 cut(s) | 74, 212, 429, 490, 1113, 1267, 1604, 1695, 1938 |
| HindIII | AAGCTT | 1 cut(s) | 2459 |
| HpaII | CCGG | 3 cut(s) | 402, 1772, 2546 |
| HphI | GGTGA | 9 cut(s) | 119, 245, 416, 620, 1757, 1820, 2187, 2196, 2265 |
| Hpy166II | GTNNAC | 6 cut(s) | 407, 1667, 1868, 2054, 2238, 2393 |
| Hpy188I | TCNGA | 9 cut(s) | 295, 1072, 2032, 2122, 2136, 2290, 2298, 2362, 2409 |
| Hpy8I | GTNNAC | 6 cut(s) | 407, 1667, 1868, 2054, 2238, 2393 |
| HpyAV | CCTTC | 7 cut(s) | 677, 1482, 1574, 2177, 2181, 2208, 2238 |
| HpyCH4III | ACNGT | 4 cut(s) | 99, 587, 1718, 2140 |
| HpyCH4IV | ACGT | 3 cut(s) | 79, 288, 1996 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 248, 1847, 1907 |
| HpySE526I | ACGT | 3 cut(s) | 79, 288, 1996 |
| Hsp92II | CATG | 9 cut(s) | 74, 212, 429, 490, 1113, 1267, 1604, 1695, 1938 |
| Ksp22I | TGATCA | 2 cut(s) | 205, 1912 |
| LguI | GCTCTTC | 1 cut(s) | 1743 |
| LmnI | GCTCC | 4 cut(s) | 392, 790, 1432, 2152 |
| Lsp1109I | GCAGC | 5 cut(s) | 466, 494, 1528, 1862, 2002 |
| LweI | GCATC | 8 cut(s) | 112, 340, 1084, 1618, 1862, 2036, 2353, 2417 |
| MaeI | CTAG | 4 cut(s) | 1730, 2049, 2373, 2423 |
| MaeII | ACGT | 3 cut(s) | 79, 288, 1996 |
| MaeIII | GTNAC | 3 cut(s) | 649, 1256, 1394 |
| MbiI | CCGCTC | 1 cut(s) | 387 |
| MfeI | CAATTG | 2 cut(s) | 1638, 1686 |
| MflI | RGATCY | 2 cut(s) | 2008, 2125 |
| MhlI | GDGCHC | 2 cut(s) | 787, 2056 |
| MlsI | TGGCCA | 1 cut(s) | 2326 |
| MluNI | TGGCCA | 1 cut(s) | 2326 |
| MlyI | GAGTC | 8 cut(s) | 586, 761, 836, 1069, 1390, 1964, 2221, 2257 |
| MmeI | TCCRAC | 1 cut(s) | 193 |
| Mox20I | TGGCCA | 1 cut(s) | 2326 |
| MroXI | GAANNNNTTC | 2 cut(s) | 411, 666 |
| MscI | TGGCCA | 1 cut(s) | 2326 |
| MseI | TTAA | 9 cut(s) | 471, 876, 1124, 1187, 1308, 1767, 1889, 2093, 2565 |
| MslI | CAYNNNNRTG | 5 cut(s) | 11, 1783, 1939, 2398, 2425 |
| Msp20I | TGGCCA | 1 cut(s) | 2326 |
| MspI | CCGG | 3 cut(s) | 402, 1772, 2546 |
| MspR9I | CCNGG | 2 cut(s) | 402, 1482 |
| MunI | CAATTG | 2 cut(s) | 1638, 1686 |
| Mva1269I | GAATGC | 1 cut(s) | 1753 |
| MvaI | CCWGG | 1 cut(s) | 1482 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 248, 1847, 1907 |
| NciI | CCSGG | 1 cut(s) | 402 |
| NlaIII | CATG | 9 cut(s) | 74, 212, 429, 490, 1113, 1267, 1604, 1695, 1938 |
| NlaIV | GGNNCC | 2 cut(s) | 844, 1107 |
| NspI | RCATGY | 3 cut(s) | 429, 1604, 1695 |
| OliI | CACNNNNGTG | 1 cut(s) | 2398 |
| PaeI | GCATGC | 1 cut(s) | 429 |
| PaqCI | CACCTGC | 2 cut(s) | 124, 1306 |
| PciSI | GCTCTTC | 1 cut(s) | 1743 |
| PctI | GAATGC | 1 cut(s) | 1753 |
| PdmI | GAANNNNTTC | 2 cut(s) | 411, 666 |
| PfeI | GAWTC | 7 cut(s) | 176, 260, 662, 1030, 1470, 1792, 2293 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2222, 2446 |
| PfoI | TCCNGGA | 1 cut(s) | 1480 |
| PkrI | GCNGC | 6 cut(s) | 481, 484, 1315, 1543, 1852, 1992 |
| PleI | GAGTC | 8 cut(s) | 585, 760, 835, 1069, 1389, 1963, 2220, 2256 |
| PmaCI | CACGTG | 1 cut(s) | 1997 |
| PmlI | CACGTG | 1 cut(s) | 1997 |
| PpsI | GAGTC | 8 cut(s) | 585, 760, 835, 1069, 1389, 1963, 2220, 2256 |
| Ppu21I | YACGTR | 1 cut(s) | 1997 |
| PpuMI | RGGWCCY | 1 cut(s) | 1105 |
| PshBI | ATTAAT | 1 cut(s) | 2565 |
| Psp5II | RGGWCCY | 1 cut(s) | 1105 |
| Psp6I | CCWGG | 1 cut(s) | 1480 |
| PspCI | CACGTG | 1 cut(s) | 1997 |
| PspGI | CCWGG | 1 cut(s) | 1480 |
| PspN4I | GGNNCC | 2 cut(s) | 844, 1107 |
| PspPI | GGNCC | 2 cut(s) | 382, 1105 |
| PspPPI | RGGWCCY | 1 cut(s) | 1105 |
| PstI | CTGCAG | 3 cut(s) | 121, 484, 1839 |
| PsuI | RGATCY | 2 cut(s) | 2008, 2125 |
| RsaI | GTAC | 3 cut(s) | 75, 2392, 2552 |
| RsaNI | GTAC | 3 cut(s) | 74, 2391, 2551 |
| RseI | CAYNNNNRTG | 5 cut(s) | 11, 1783, 1939, 2398, 2425 |
| SapI | GCTCTTC | 1 cut(s) | 1743 |
| SaqAI | TTAA | 9 cut(s) | 471, 876, 1124, 1187, 1308, 1767, 1889, 2093, 2565 |
| SatI | GCNGC | 6 cut(s) | 480, 483, 1314, 1542, 1851, 1991 |
| Sau96I | GGNCC | 2 cut(s) | 382, 1105 |
| ScaI | AGTACT | 1 cut(s) | 2552 |
| SchI | GAGTC | 8 cut(s) | 586, 761, 836, 1069, 1390, 1964, 2221, 2257 |
| ScrFI | CCNGG | 2 cut(s) | 402, 1482 |
| SduI | GDGCHC | 2 cut(s) | 787, 2056 |
| SfaNI | GCATC | 8 cut(s) | 112, 340, 1084, 1618, 1862, 2036, 2353, 2417 |
| SfcI | CTRYAG | 4 cut(s) | 117, 480, 1521, 1835 |
| SinI | GGWCC | 2 cut(s) | 382, 1105 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 11, 1783, 1939, 2398, 2425 |
| SmlI | CTYRAG | 2 cut(s) | 1796, 2462 |
| SmoI | CTYRAG | 2 cut(s) | 1796, 2462 |
| SphI | GCATGC | 1 cut(s) | 429 |
| SsiI | CCGC | 4 cut(s) | 61, 385, 1157, 1314 |
| SspI | AATATT | 1 cut(s) | 191 |
| SspMI | CTAG | 4 cut(s) | 1730, 2049, 2373, 2423 |
| StyD4I | CCNGG | 2 cut(s) | 400, 1480 |
| TaaI | ACNGT | 4 cut(s) | 99, 587, 1718, 2140 |
| TaiI | ACGT | 3 cut(s) | 82, 291, 1999 |
| TaqI | TCGA | 4 cut(s) | 201, 871, 1417, 1958 |
| TaqII | GACCGA | 1 cut(s) | 2495 |
| TatI | WGTACW | 3 cut(s) | 73, 2390, 2550 |
| TauI | GCSGC | 1 cut(s) | 1316 |
| TfiI | GAWTC | 7 cut(s) | 176, 260, 662, 1030, 1470, 1792, 2293 |
| Tru1I | TTAA | 9 cut(s) | 471, 876, 1124, 1187, 1308, 1767, 1889, 2093, 2565 |
| Tru9I | TTAA | 9 cut(s) | 471, 876, 1124, 1187, 1308, 1767, 1889, 2093, 2565 |
| TscAI | CASTG | 5 cut(s) | 1957, 2065, 2181, 2502, 2562 |
| TseI | GCWGC | 5 cut(s) | 479, 482, 1541, 1850, 1990 |
| TspDTI | ATGAA | 9 cut(s) | 62, 168, 273, 357, 404, 1350, 1923, 2145, 2274 |
| TspRI | CASTG | 5 cut(s) | 1957, 2065, 2181, 2502, 2562 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2222, 2446 |
| VneI | GTGCAC | 1 cut(s) | 2052 |
| VpaK11BI | GGWCC | 2 cut(s) | 382, 1105 |
| VspI | ATTAAT | 1 cut(s) | 2565 |
| XapI | RAATTY | 3 cut(s) | 49, 898, 2188 |
| XceI | RCATGY | 3 cut(s) | 429, 1604, 1695 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1201, 1488 |
| XmnI | GAANNNNTTC | 2 cut(s) | 411, 666 |
| XspI | CTAG | 4 cut(s) | 1730, 2049, 2373, 2423 |
| ZrmI | AGTACT | 1 cut(s) | 2552 |