Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005552.1

Orthogroup ID

OG0003049

Physical Location & Seq

Genomic Coordinates Forward (+)

3390 .. 8525

Gene Structure 5136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005552.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2556 bp

atgaatttatttagaatatctagtcaacatgtacaacatgtaccggctgctgccgtttatgaaccacctccggaggcgcagcttcccctgaaaccagcaggaccaactttggagggtttaattgctgaagattcatatccacagtatgctgcaattgctgatcacgttggagaaaatgaatccggagttgaacatggcactggtgcaaagaacgactcatctgttatagcaaagcatcatgacgtttcggatgaggaaggatggattgcgattccatacaaagaactccccgataattggaatgatgcaccggatatacaatcattacgctctatggaccgctcctttgtttttcctggtgaacatgttcatatccttgccttgctgtcagcatgtaagcaggatacagaaattattactccttttaaattagctgcagctatgaataaaaatggtttaaagcaaagcccaacgaagcaaaatgggaacgtggaagatgaaaatgatacattgtcaagaaaaggagaaagtagtcttgatagtcaaggtcaaggtacagatcaaattggtgaaaccctgtcaaaagagaaggctgatccacaaaaggatgtttctgctagtgaatcccttcttcgaatggaggatcacaaaagacaaactgaaatattattgcaaagatttgagaggtctcatttttttgttaggattgcggagtcaggtgagtccctttggtcaaaaaagggttcttctaagaagtcttcagaatcttctgagatggatggtctagaggacacgttaaatggaacccagaaaagtgcattgtctcaactcaatgccattgttgataaaggaaattttgatcccaaagtctctggtggtgtagcaagaaataatgtcaagtgttgctctctttctaatggagacatagtggttcttttacaggtgaatgttggtgtagattttttgaatgaccctgttattgagattcttcagtttgagaagtaccgtgagagaagtttgtctacagaggctcaggagaacttggtttatgcaaatccggacccatgtggagagttgttaaaatggctgcttcctttggataacgtacttcctcctccagctcgtcctttatctcctcctttaacttctaattcaggaattggtggcacacatcaaaagcccacatccggttctcagattttatcccattttagaagttactccatgtcatcactaccacaaaatactacacaaccacctgcacctattaaagccgccggttctaagccaagctttgatgttgaagactgggatcagttttcatctctgaagctcttgaagagtaaaaaagctggttacgacgggcttttatcttttcgaggtgtgtcattggagcgcgaaaggttttctgttcgttgtggattggaaggcatctatacaccaggaagaagatggaggagaaaacttgaaatcatacaacctgtagaaattcattcttttgctgcggactgcaatacagatgaccttctctgtgtccagataaagaatgtttctccagcacatgcacccaatattgtggtgtatgtagatgctataacgattgtctttgaggaggcttcaaaaggtggacagtctgtatcgttaccaattgtatgtgtggaagcaggcagtgaccatagtataccaaatttggcactcaggagaggtgaagagcattcttttattcttaaaccagcaacaaccctgtggaagaatttcaagactggtggtgatagaagcactcaacaatcactagcacaggctggaaatgcagcatctagttcacatctagcattgaagactgctgaaggaaaaagggctgcttcaaccgctgaccagtatgcaattatggtatcctgtcggtgcaactacacggagtcaagattgttttttaaacagccaacaagttggcgaccgcgtatgtcaagggatcttatgatatctgttgcgtctgaaatgtctggacaatctagtgcaccaaatgctggagtctcccaacttcctgttcaggtcttaactcttcaggcttcaaacttaacaactgaagatctatctctgacggttcttgccccggcttcatttactttgccaccttcagtcgtatccttgaattcttcaccttcttctccaatgagtccatttgttggttttcctgggtttacaggaagaacaactgccgagagacataactctacaatgcagaggctgaactcagcaccctctatattgacaaatcagaaacaagcttcttctaaagaacaagcttctccagtatctgatattgttcctactgctggtttaggttgtacacatttgtggcttcagagtagagttccactaggatgtgttccctcccaatctacggccaccatcaagcttgagctacttccattgactgatggcataattacgctggacactcttcagatcgatgtcaaggaaaaaggttgtacttacatacctgagcactcgctgaagattaatgccacttccagtatttcctcggggattctttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

851

Amino Acids

92.24

Weight (kDa)

5.85

Isoelectric Point (pI)

54.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17900 AT3G17900
fragaria_vesca	FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960
malus_domestica	MD13G1079000.v1.1 MD16G1078700.v1.1
prunus_persica	Prupe.1G267800_v2.0.a1 Prupe.1G267800_v2.0.a1
pyrus_communis	pycom13g06860 pycom16g06810
rosa_chinensis	RchiOBHm_Chr1g0331861 RchiOBHm_Chr1g0331881 RchiOBHm_Chr1g0353921 RchiOBHm_Chr4g0440641
rosa_laevigata	RLG00000006164 RLG00000029707
rosa_multiflora	Rmu_co8243009.1_g000001 Rmu_sc0001915.1_g000004 Rmu_sc0005552.1_g000001 Rmu_sc0007658.1_g000002 Rmu_sc0008018.1_g000005
rosa_roxburghii	Rroxscaffold_4G00301470 Rroxscaffold_5G00381450
rosa_rugosa	Rorug01G0239400 Rorug04G0327100
rosa_samantha	Rh1AG250900 Rh1BG221700 Rh1CG234700 Rh1DG248700 Rh4AG379000 Rh4BG391800 Rh4CG406300
rosa_wichuraiana	Rw1G021890 Rw4G032550 Rw4G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1267
Acc36I	ACCTGC	1 cut(s)	1267
AccB7I	CCANNNNNTGG	2 cut(s)	2024, 2183
AccBSI	CCGCTC	1 cut(s)	342
AccI	GTMKAC	2 cut(s)	1022, 1681
AccII	CGCG	2 cut(s)	1398, 1957
AccIII	TCCGGA	3 cut(s)	70, 182, 1057
AciI	CCGC	6 cut(s)	340, 710, 1275, 1505, 1869, 1955
AclWI	GGATC	5 cut(s)	590, 651, 854, 1320, 1977
AcoI	YGGCCR	1 cut(s)	2403
AcsI	RAATTY	6 cut(s)	4, 853, 1488, 1687, 1753, 2149
AfaI	GTAC	7 cut(s)	33, 42, 556, 1004, 1107, 2347, 2491
AfiI	CCNNNNNNNGG	6 cut(s)	297, 1187, 2024, 2183, 2333, 2401
AflIII	ACRYGT	4 cut(s)	28, 37, 364, 792
AjnI	CCWGG	3 cut(s)	355, 1441, 2191
AjuI	GAANNNNNNNTTGG	2 cut(s)	2028, 2060
AleI	CACNNNNGTG	1 cut(s)	2353
Alw21I	GWGCWC	2 cut(s)	2017, 2508
Alw26I	GTCTC	6 cut(s)	693, 828, 874, 915, 2035, 2215
Alw44I	GTGCAC	1 cut(s)	2013
AlwI	GGATC	5 cut(s)	590, 651, 854, 1320, 1977
AlwNI	CAGNNNCTG	2 cut(s)	2245, 2315
Ama87I	CYCGRG	1 cut(s)	2542
Aor13HI	TCCGGA	3 cut(s)	70, 182, 1057
AoxI	GGCC	1 cut(s)	2403
ApaLI	GTGCAC	1 cut(s)	2013
ApoI	RAATTY	6 cut(s)	4, 853, 1488, 1687, 1753, 2149
ArsI	GACNNNNNNTTYG	2 cut(s)	329, 361
AseI	ATTAAT	1 cut(s)	2520
Asp700I	GAANNNNTTC	3 cut(s)	366, 627, 1754
AspLEI	GCGC	2 cut(s)	79, 1398
AspS9I	GGNCC	3 cut(s)	101, 337, 1060
AsuC2I	CCSGG	1 cut(s)	2111
AsuHPI	GGTGA	7 cut(s)	371, 581, 731, 955, 1718, 1781, 2148
AsuII	TTCGAA	1 cut(s)	634
AvaI	CYCGRG	1 cut(s)	2542
AvaII	GGWCC	3 cut(s)	101, 337, 1060
BaeGI	GKGCMC	1 cut(s)	2017
BarI	GAAGNNNNNNTAC	2 cut(s)	1006, 1038
BbsI	GAAGAC	3 cut(s)	750, 1311, 1844
Bbv12I	GWGCWC	2 cut(s)	2017, 2508
BccI	CCATC	6 cut(s)	255, 769, 773, 1446, 2417, 2432
BceAI	ACGGC	2 cut(s)	38, 2418
BciT130I	CCWGG	3 cut(s)	357, 1443, 2193
BciVI	GTATCC	3 cut(s)	397, 1903, 2152
BclI	TGATCA	1 cut(s)	160
BcnI	CCSGG	1 cut(s)	2111
BcoDI	GTCTC	6 cut(s)	693, 828, 874, 915, 2035, 2215
BfaI	CTAG	8 cut(s)	21, 618, 785, 1793, 1818, 1829, 2010, 2378
BfmI	CTRYAG	3 cut(s)	435, 1023, 1482
BfuAI	ACCTGC	1 cut(s)	1267
BfuI	GTATCC	3 cut(s)	397, 1903, 2152
BglII	AGATCT	1 cut(s)	2086
Bme1390I	CCNGG	4 cut(s)	357, 1443, 2111, 2193
Bme18I	GGWCC	3 cut(s)	101, 337, 1060
BmeT110I	CYCGRG	1 cut(s)	2542
BmgT120I	GGNCC	3 cut(s)	101, 337, 1060
BmiI	GGNNCC	2 cut(s)	805, 1062
BmrFI	CCNGG	4 cut(s)	357, 1443, 2111, 2193
BmrI	ACTGGG	1 cut(s)	1318
BmsI	GCATC	5 cut(s)	244, 295, 1440, 1579, 1823
BmuI	ACTGGG	1 cut(s)	1318
BpiI	GAAGAC	3 cut(s)	750, 1311, 1844
BpmI	CTGGAG	4 cut(s)	1101, 1539, 2046, 2292
Bpu10I	CCTNAGC	2 cut(s)	1032, 2502
Bpu14I	TTCGAA	1 cut(s)	634
BpuEI	CTTGAG	1 cut(s)	2438
BpuMI	CCSGG	1 cut(s)	2111
Bsa29I	ATCGAT	1 cut(s)	2469
BsaBI	GATNNNNATC	1 cut(s)	135
BsaI	GGTCTC	1 cut(s)	693
BsaJI	CCNNGG	3 cut(s)	2109, 2192, 2541
BsaWI	WCCGGW	5 cut(s)	70, 182, 310, 1057, 1187
BsaXI	ACNNNNNCTCC	2 cut(s)	912, 942
Bsc4I	CCNNNNNNNGG	6 cut(s)	297, 1187, 2024, 2183, 2333, 2401
Bse118I	RCCGGY	2 cut(s)	43, 1277
Bse1I	ACTGG	6 cut(s)	205, 1313, 1768, 1876, 2309, 2532
Bse8I	GATNNNNATC	1 cut(s)	135
BseAI	TCCGGA	3 cut(s)	70, 182, 1057
BseBI	CCWGG	3 cut(s)	357, 1443, 2193
BseCI	ATCGAT	1 cut(s)	2469
BseDI	CCNNGG	3 cut(s)	2109, 2192, 2541
BseGI	GGATG	6 cut(s)	256, 266, 613, 784, 1184, 2387
BseJI	GATNNNNATC	1 cut(s)	135
BseLI	CCNNNNNNNGG	6 cut(s)	297, 1187, 2024, 2183, 2333, 2401
BseMII	CTCAG	6 cut(s)	762, 1046, 1208, 1711, 2265, 2493
BseNI	ACTGG	6 cut(s)	205, 1313, 1768, 1876, 2309, 2532
BseRI	GAGGAG	4 cut(s)	1104, 1125, 1471, 1625
BseSI	GKGCMC	1 cut(s)	2017
BsgI	GTGCAG	1 cut(s)	1245
Bsh1236I	CGCG	2 cut(s)	1398, 1957
Bsh1285I	CGRYCG	1 cut(s)	1955
BshFI	GGCC	1 cut(s)	2405
BshVI	ATCGAT	1 cut(s)	2469
BsiEI	CGRYCG	1 cut(s)	1955
BsiHKAI	GWGCWC	2 cut(s)	2017, 2508
BsiHKCI	CYCGRG	1 cut(s)	2542
BsiSI	CCGG	8 cut(s)	44, 71, 183, 311, 1058, 1188, 1278, 2111
BslFI	GGGAC	1 cut(s)	709
BslI	CCNNNNNNNGG	6 cut(s)	297, 1187, 2024, 2183, 2333, 2401
BsmAI	GTCTC	6 cut(s)	693, 828, 874, 915, 2035, 2215
BsmFI	GGGAC	1 cut(s)	709
BsmI	GAATGC	1 cut(s)	1714
BsnI	GGCC	1 cut(s)	2405
Bso31I	GGTCTC	1 cut(s)	693
BsoBI	CYCGRG	1 cut(s)	2542
Bsp119I	TTCGAA	1 cut(s)	634
Bsp1286I	GDGCHC	2 cut(s)	2017, 2508
Bsp13I	TCCGGA	3 cut(s)	70, 182, 1057
Bsp1407I	TGTACA	2 cut(s)	31, 2345
Bsp143I	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
BspACI	CCGC	6 cut(s)	340, 710, 1275, 1505, 1869, 1955
BspANI	GGCC	1 cut(s)	2405
BspCNI	CTCAG	6 cut(s)	763, 1045, 1207, 1710, 2264, 2494
BspDI	ATCGAT	1 cut(s)	2469
BspEI	TCCGGA	3 cut(s)	70, 182, 1057
BspFNI	CGCG	2 cut(s)	1398, 1957
BspHI	TCATGA	1 cut(s)	238
BspLI	GGNNCC	2 cut(s)	805, 1062
BspMAI	CTGCAG	1 cut(s)	439
BspMI	ACCTGC	1 cut(s)	1267
BspPI	GGATC	5 cut(s)	590, 651, 854, 1320, 1977
BspQI	GCTCTTC	1 cut(s)	1704
BspT104I	TTCGAA	1 cut(s)	634
BspTNI	GGTCTC	1 cut(s)	693
BsrBI	CCGCTC	1 cut(s)	342
BsrFI	RCCGGY	2 cut(s)	43, 1277
BsrGI	TGTACA	2 cut(s)	31, 2345
BsrI	ACTGG	6 cut(s)	205, 1313, 1768, 1876, 2309, 2532
BssAI	RCCGGY	2 cut(s)	43, 1277
BssECI	CCNNGG	3 cut(s)	2109, 2192, 2541
BssMI	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
BssNAI	GTATAC	1 cut(s)	1682
Bst1107I	GTATAC	1 cut(s)	1682
Bst2UI	CCWGG	3 cut(s)	357, 1443, 2193
Bst4CI	ACNGT	4 cut(s)	144, 1007, 1632, 2101
Bst6I	CTCTTC	4 cut(s)	1334, 1704, 2064, 2466
BstAPI	GCANNNNNTGC	1 cut(s)	2021
BstAUI	TGTACA	2 cut(s)	31, 2345
BstBI	TTCGAA	1 cut(s)	634
BstC8I	GCNNGC	1 cut(s)	1666
BstDEI	CTNAG	8 cut(s)	750, 771, 1032, 1194, 1284, 1697, 2251, 2502
BstF5I	GGATG	6 cut(s)	256, 266, 613, 784, 1184, 2387
BstFNI	CGCG	2 cut(s)	1398, 1957
BstHHI	GCGC	2 cut(s)	79, 1398
BstKTI	GATC	9 cut(s)	163, 562, 598, 646, 862, 1315, 1972, 2089, 2469
BstMAI	GTCTC	6 cut(s)	693, 828, 874, 915, 2035, 2215
BstMBI	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
BstMCI	CGRYCG	1 cut(s)	1955
BstMWI	GCNNNNNNNGC	4 cut(s)	155, 1808, 1868, 2021
BstNI	CCWGG	3 cut(s)	357, 1443, 2193
BstNSI	RCATGY	5 cut(s)	32, 41, 368, 396, 1565
BstSCI	CCNGG	4 cut(s)	355, 1441, 2109, 2191
BstSFI	CTRYAG	3 cut(s)	435, 1023, 1482
BstSLI	GKGCMC	1 cut(s)	2017
BstUI	CGCG	2 cut(s)	1398, 1957
BstV2I	GAAGAC	3 cut(s)	750, 1311, 1844
BstX2I	RGATCY	2 cut(s)	1969, 2086
BstXI	CCANNNNNNTGG	2 cut(s)	1576, 1947
BstYI	RGATCY	2 cut(s)	1969, 2086
BstZ17I	GTATAC	1 cut(s)	1682
Bsu15I	ATCGAT	1 cut(s)	2469
BsuI	GTATCC	3 cut(s)	397, 1903, 2152
BsuRI	GGCC	1 cut(s)	2405
BsuTUI	ATCGAT	1 cut(s)	2469
BtsCI	GGATG	6 cut(s)	256, 266, 613, 784, 1184, 2387
BtsI	GCAGTG	1 cut(s)	1675
BtsIMutI	CAGTG	2 cut(s)	198, 1675
BveI	ACCTGC	1 cut(s)	1267
Cac8I	GCNNGC	1 cut(s)	1666
CaiI	CAGNNNCTG	2 cut(s)	2245, 2315
CciI	TCATGA	1 cut(s)	238
CfoI	GCGC	2 cut(s)	79, 1398
Cfr10I	RCCGGY	2 cut(s)	43, 1277
Cfr13I	GGNCC	3 cut(s)	101, 337, 1060
ClaI	ATCGAT	1 cut(s)	2469
CseI	GACGC	1 cut(s)	1977
Csp6I	GTAC	7 cut(s)	32, 41, 555, 1003, 1106, 2346, 2490
CspCI	CAANNNNNGTGG	2 cut(s)	1747, 1782
CviAII	CATG	9 cut(s)	29, 38, 194, 239, 365, 393, 1065, 1225, 1562
CviQI	GTAC	7 cut(s)	32, 41, 555, 1003, 1106, 2346, 2490
DdeI	CTNAG	8 cut(s)	750, 771, 1032, 1194, 1284, 1697, 2251, 2502
DpnI	GATC	9 cut(s)	162, 561, 597, 645, 861, 1314, 1971, 2088, 2468
DpnII	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
DraI	TTTAAA	3 cut(s)	427, 459, 1933
EaeI	YGGCCR	1 cut(s)	2403
Eam1104I	CTCTTC	4 cut(s)	1334, 1704, 2064, 2466
EarI	CTCTTC	4 cut(s)	1334, 1704, 2064, 2466
Eco31I	GGTCTC	1 cut(s)	693
Eco32I	GATATC	1 cut(s)	1980
Eco47I	GGWCC	3 cut(s)	101, 337, 1060
Eco88I	CYCGRG	1 cut(s)	2542
EcoRI	GAATTC	1 cut(s)	2149
EcoRII	CCWGG	3 cut(s)	355, 1441, 2191
EcoRV	GATATC	1 cut(s)	1980
FaeI	CATG	9 cut(s)	32, 41, 197, 242, 368, 396, 1068, 1228, 1565
FalI	AAGNNNNNCTT	4 cut(s)	1277, 1309, 1846, 1878
FaqI	GGGAC	1 cut(s)	709
FatI	CATG	9 cut(s)	28, 37, 193, 238, 364, 392, 1064, 1224, 1561
FbaI	TGATCA	1 cut(s)	160
FblI	GTMKAC	2 cut(s)	1022, 1681
FokI	GGATG	6 cut(s)	263, 273, 620, 791, 1171, 2394
FspBI	CTAG	8 cut(s)	21, 618, 785, 1793, 1818, 1829, 2010, 2378
GlaI	GCGC	2 cut(s)	78, 1397
GsuI	CTGGAG	4 cut(s)	1101, 1539, 2046, 2292
HaeIII	GGCC	1 cut(s)	2405
HapII	CCGG	8 cut(s)	44, 71, 183, 311, 1058, 1188, 1278, 2111
HgaI	GACGC	1 cut(s)	1977
HhaI	GCGC	2 cut(s)	79, 1398
Hin1II	CATG	9 cut(s)	32, 41, 197, 242, 368, 396, 1068, 1228, 1565
Hin6I	GCGC	2 cut(s)	77, 1396
HinP1I	GCGC	2 cut(s)	77, 1396
HincII	GTYRAC	1 cut(s)	26
HindII	GTYRAC	1 cut(s)	26
HindIII	AAGCTT	4 cut(s)	1291, 2283, 2301, 2414
HpaII	CCGG	8 cut(s)	44, 71, 183, 311, 1058, 1188, 1278, 2111
HphI	GGTGA	7 cut(s)	371, 581, 731, 955, 1718, 1781, 2148
Hpy166II	GTNNAC	9 cut(s)	26, 362, 1023, 1628, 1682, 1823, 2015, 2199, 2348
Hpy8I	GTNNAC	9 cut(s)	26, 362, 1023, 1628, 1682, 1823, 2015, 2199, 2348
Hpy99I	CGWCG	1 cut(s)	1364
HpyAV	CCTTC	8 cut(s)	251, 583, 638, 1421, 1535, 1841, 2142, 2169
HpyCH4III	ACNGT	4 cut(s)	144, 1007, 1632, 2101
HpyCH4IV	ACGT	5 cut(s)	165, 243, 489, 794, 1104
HpyF10VI	GCNNNNNNNGC	4 cut(s)	155, 1808, 1868, 2021
HpyF3I	CTNAG	8 cut(s)	750, 771, 1032, 1194, 1284, 1697, 2251, 2502
HpySE526I	ACGT	5 cut(s)	165, 243, 489, 794, 1104
Hsp92II	CATG	9 cut(s)	32, 41, 197, 242, 368, 396, 1068, 1228, 1565
HspAI	GCGC	2 cut(s)	77, 1396
Kpn2I	TCCGGA	3 cut(s)	70, 182, 1057
Ksp22I	TGATCA	1 cut(s)	160
Kzo9I	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
LguI	GCTCTTC	1 cut(s)	1704
LmnI	GCTCC	2 cut(s)	347, 1393
LweI	GCATC	5 cut(s)	244, 295, 1440, 1579, 1823
MaeI	CTAG	8 cut(s)	21, 618, 785, 1793, 1818, 1829, 2010, 2378
MaeII	ACGT	5 cut(s)	165, 243, 489, 794, 1104
MaeIII	GTNAC	4 cut(s)	1217, 1355, 1641, 1670
MalI	GATC	9 cut(s)	162, 561, 597, 645, 861, 1314, 1971, 2088, 2468
MbiI	CCGCTC	1 cut(s)	342
MboI	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
MfeI	CAATTG	2 cut(s)	153, 1647
MflI	RGATCY	2 cut(s)	1969, 2086
MhlI	GDGCHC	2 cut(s)	2017, 2508
MlyI	GAGTC	6 cut(s)	209, 722, 731, 1925, 2037, 2182
MmeI	TCCRAC	1 cut(s)	148
MroI	TCCGGA	3 cut(s)	70, 182, 1057
MroXI	GAANNNNTTC	3 cut(s)	366, 627, 1754
MslI	CAYNNNNRTG	2 cut(s)	2353, 2380
MspA1I	CMGCKG	1 cut(s)	1871
MspI	CCGG	8 cut(s)	44, 71, 183, 311, 1058, 1188, 1278, 2111
MspR9I	CCNGG	4 cut(s)	357, 1443, 2111, 2193
MunI	CAATTG	2 cut(s)	153, 1647
Mva1269I	GAATGC	1 cut(s)	1714
MvaI	CCWGG	3 cut(s)	357, 1443, 2193
MvnI	CGCG	2 cut(s)	1398, 1957
MwoI	GCNNNNNNNGC	4 cut(s)	155, 1808, 1868, 2021
NciI	CCSGG	1 cut(s)	2111
NdeII	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
NlaIII	CATG	9 cut(s)	32, 41, 197, 242, 368, 396, 1068, 1228, 1565
NlaIV	GGNNCC	2 cut(s)	805, 1062
NmeAIII	GCCGAG	1 cut(s)	2242
NmuCI	GTSAC	1 cut(s)	1670
NspI	RCATGY	5 cut(s)	32, 41, 368, 396, 1565
NspV	TTCGAA	1 cut(s)	634
OliI	CACNNNNGTG	1 cut(s)	2353
PagI	TCATGA	1 cut(s)	238
PaqCI	CACCTGC	1 cut(s)	1267
PciI	ACATGT	3 cut(s)	28, 37, 364
PciSI	GCTCTTC	1 cut(s)	1704
PctI	GAATGC	1 cut(s)	1714
PdmI	GAANNNNTTC	3 cut(s)	366, 627, 1754
PfeI	GAWTC	7 cut(s)	131, 179, 271, 623, 764, 985, 2548
PflMI	CCANNNNNTGG	2 cut(s)	2024, 2183
PleI	GAGTC	6 cut(s)	209, 721, 730, 1924, 2036, 2181
PpsI	GAGTC	6 cut(s)	209, 721, 730, 1924, 2036, 2181
PscI	ACATGT	3 cut(s)	28, 37, 364
PshBI	ATTAAT	1 cut(s)	2520
Psp6I	CCWGG	3 cut(s)	355, 1441, 2191
PspGI	CCWGG	3 cut(s)	355, 1441, 2191
PspN4I	GGNNCC	2 cut(s)	805, 1062
PspPI	GGNCC	3 cut(s)	101, 337, 1060
PstI	CTGCAG	1 cut(s)	439
PstNI	CAGNNNCTG	2 cut(s)	2245, 2315
PsuI	RGATCY	2 cut(s)	1969, 2086
RsaI	GTAC	7 cut(s)	33, 42, 556, 1004, 1107, 2347, 2491
RsaNI	GTAC	7 cut(s)	32, 41, 555, 1003, 1106, 2346, 2490
RseI	CAYNNNNRTG	2 cut(s)	2353, 2380
SapI	GCTCTTC	1 cut(s)	1704
Sau3AI	GATC	9 cut(s)	160, 559, 595, 643, 859, 1312, 1969, 2086, 2466
Sau96I	GGNCC	3 cut(s)	101, 337, 1060
SchI	GAGTC	6 cut(s)	209, 722, 731, 1925, 2037, 2182
ScrFI	CCNGG	4 cut(s)	357, 1443, 2111, 2193
SduI	GDGCHC	2 cut(s)	2017, 2508
SfaNI	GCATC	5 cut(s)	244, 295, 1440, 1579, 1823
SfcI	CTRYAG	3 cut(s)	435, 1023, 1482
SfuI	TTCGAA	1 cut(s)	634
SinI	GGWCC	3 cut(s)	101, 337, 1060
SmiMI	CAYNNNNRTG	2 cut(s)	2353, 2380
SmlI	CTYRAG	1 cut(s)	2417
SmoI	CTYRAG	1 cut(s)	2417
SsiI	CCGC	6 cut(s)	340, 710, 1275, 1505, 1869, 1955
SspI	AATATT	2 cut(s)	666, 1573
SspMI	CTAG	8 cut(s)	21, 618, 785, 1793, 1818, 1829, 2010, 2378
StyD4I	CCNGG	4 cut(s)	355, 1441, 2109, 2191
TaaI	ACNGT	4 cut(s)	144, 1007, 1632, 2101
TaiI	ACGT	5 cut(s)	168, 246, 492, 797, 1107
TaqI	TCGA	3 cut(s)	634, 1378, 2469
TatI	WGTACW	3 cut(s)	31, 2345, 2489
TauI	GCSGC	1 cut(s)	1277
TfiI	GAWTC	7 cut(s)	131, 179, 271, 623, 764, 985, 2548
TscAI	CASTG	2 cut(s)	205, 1675
TseFI	GTSAC	1 cut(s)	1670
Tsp45I	GTSAC	1 cut(s)	1670
TspGWI	ACGGA	1 cut(s)	1928
TspRI	CASTG	2 cut(s)	205, 1675
Van91I	CCANNNNNTGG	2 cut(s)	2024, 2183
VneI	GTGCAC	1 cut(s)	2013
VpaK11BI	GGWCC	3 cut(s)	101, 337, 1060
VspI	ATTAAT	1 cut(s)	2520
XapI	RAATTY	6 cut(s)	4, 853, 1488, 1687, 1753, 2149
XbaI	TCTAGA	1 cut(s)	784
XceI	RCATGY	5 cut(s)	32, 41, 368, 396, 1565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1449
XmiI	GTMKAC	2 cut(s)	1022, 1681
XmnI	GAANNNNTTC	3 cut(s)	366, 627, 1754
XspI	CTAG	8 cut(s)	21, 618, 785, 1793, 1818, 1829, 2010, 2378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.