Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0003049

Physical Location & Seq

Genomic Coordinates Forward (+)

21830743 .. 21839831

Gene Structure 9089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00301470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGAATTTATTTAGAATATCTAGTCAACATGTACCGGCTGCTGCCGTTTATGAACCACCTCCGGAGGCGGAGGCGCAGCTTCCCCCGAAACCAGCAGGACCAACTCTGGAGGGTTTAATTGCTGAAGATTCATATCCACAGTATGCTGCAATTGCTGATCACGTTGGAGAAAATGAATCCGGCGCTGGTGCAAAGAACGACTCATCTGTTATAGCAAAGCATCATGACGTTTCGGATGAGGAAGGATGGATTGCGATTCCATACAAAGAACTCCCCGATAATTGGAATGATGCACTGGATATACAATCATTACACTCTTTGGACCGCTCCTTTGTTTTTCCTGGTGAACAAGTTCATATCCTTGCATTGCTGTCAGCATGTAAGCAGGATACAGAAATTATTACTCCTTTTAAATTAGCTGCAGCTATGAATAAAAATGGCTTAAAGCAAAGCCCAACGAAGAAAAATGGGAATGTGGAAGATGAAAATGATACATTGTCAAGAAAAGGAGAAAGTAGTCCTGATAGTCAATGTACAGATCAAAATGGTGAAACCCTGTCAAAAGAGAAGGCCGATCCACAAAAGGATGTTTCTGCTAGTGAATCCCTTCTTCGAATGGAGGATCACAAAAGACAAACTGAAATATTATTGCAAAGATTTGAGAGGTCTCATTTTTTTGTTAGGATTGTGGAGTCAGGTCAGTCCCTTTGGTCAAAAAAGGGTTCTTCTAAGAAGTCTTCAGAATCTTTTGAGATGGATGGTCCAGAGGACACGTTAAATGGAACCCAGAAAAGTGCATTGTCTCAACTCAATGCCATTGTTGATAAAGGAAATTTTGATCCCAACGTCTCTGGTGGTGTAGCAAGAAATAATGTCAAGTGTTGCTCTCTTTCTAATGGAGACATAGTGGTTCTTTTACAGGTGAATGTTGGTGTCGATTTTTTGAATGACCCTGTTATTGAGATTCTTCAGTTTGAGAAGTACCGTGAGAGAAGTTTGGCTACAGAGGCTCAGGAGAACTTGGTTTATGCAAATCCGGACCCATGTGGAGAGTTGTTAAAATGGCTGCTTCCTTTGGATAACGTACTTCCTCCTCCAGCTCGTCCTTTATCTCCTCCTTTAACTTCTAATTCAGGAATTGGTGGCACACCTCAAAAGCCCACATCCGGTTCTCAGATTTTCTCCCATTTTAGAAGTTACTCCATGTCATCACTACCACAAAATACTGCACAACCACCTGCACCTATTAAAGCCGCCAGTTCTAAGCCAAGCTTTGATCTTGAAGACTGGGATCAGTTTTCATCTCTGAAGCTCTTGAAGAGTCAAAAAGCTGGTTACGACGGGCTTTTATCTTTTCGAGGTGTGTCATTGGAGCGCGAAAGGTTTTCTGTTCGTTGTGGATTGGAAGGCATCTATACACCAGGAAGAAGATGGAGGAGAAAACTTGAAATCATACAACCTGTAGAAATTCATTCTTTTGCTGCGGACTGCAATACAGATGACCTTCTCTGTGTCCAGATAAAGAATGTTTCTCCAGCACATGCACCCAATATTGTGGTGTATGTAGATGCTATAACGATTGTCTCTGAGGAGGCTTCAAAAGGTGGACAGTCTGTATCGTTACCAATTGTATGTGTGGAAGCAGGAAGTGACCATAGTTTACCAAATTTAGCACTCAGGAGAGGTGAAGAGCATTCTTTTATTCTTAAACCAGCAACAACCCTGTGGAAGAATTTCAAGACTGGTGGTGATAGAAGCACTCAACAATCACTAGCACAGGCTGGAAATGCAGCATCAAGTTCACATCTAGCATTGAAGACTGCTGAAGGAAAAAGGGCTGCTTCAACTGCTGACCATTATGCAATTATGGTATCCTGTCGGTGCAACTACACAGAGTCAAGATTGTTTTTTAAACAGCCAACAAGTTGGCGACCGCGTATTTCAAGGGATCTTATGATATCTGTTGCGTCTGAAATGTCTGGACAATCTAGCGCACCAAATGCTGGAGTCTCCCAACTTCCTGTTCAGGTCTTAACTCTTCAGGCTTCAAACTTAACAACTGAAGATCTATCTCTGACGGTTCTTGCCCCGGCTTCATTTACTTCGCCACCTTCAGTCGTATCCTTGAATTCTTCACCTTCTTCTCCAATGAGTCCATTTGTGGGTTTTCCTGGGTTTACAGGAAGAACAACTGCCGAGAGACATAACTCTACAATGCAGAGGCTGAACTCAGCACCCTCTATATTGACAAATCAGAAACAAGCTTCTTCTAAAGAACAAGCTTCTCCAGTATCTGATGTTGTTCCTACTGCTGGTTTAGGTTGTACACATTTGTGGCTTCAGAGTAGAGTTCCACTAGGATGTGTTCCCTCCCAATCTACGGCCACCATCAAGCTTAAGCTACTTCCATTGACCGATGGCATAATTACGCTGGACACTCTTCAGATTGATGTCAAGGAAAAAGGTCGTACTTACATACCTGAGCACTCACTGAAGATTAATGCCACTTCCAGCATTTCCTCGGGATTCTTTAAGAAACATCCTGTGCAACATGCATTTCATTCCACATTCGTATTGAAGTGTCAACTTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

864

Amino Acids

93.82

Weight (kDa)

6.19

Isoelectric Point (pI)

54.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17900 AT3G17900
fragaria_vesca	FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960
malus_domestica	MD13G1079000.v1.1 MD16G1078700.v1.1
prunus_persica	Prupe.1G267800_v2.0.a1 Prupe.1G267800_v2.0.a1
pyrus_communis	pycom13g06860 pycom16g06810
rosa_chinensis	RchiOBHm_Chr1g0331861 RchiOBHm_Chr1g0331881 RchiOBHm_Chr1g0353921 RchiOBHm_Chr4g0440641
rosa_laevigata	RLG00000006164 RLG00000029707
rosa_multiflora	Rmu_co8243009.1_g000001 Rmu_sc0001915.1_g000004 Rmu_sc0005552.1_g000001 Rmu_sc0007658.1_g000002 Rmu_sc0008018.1_g000005
rosa_roxburghii	Rroxscaffold_4G00301470 Rroxscaffold_5G00381450
rosa_rugosa	Rorug01G0239400 Rorug04G0327100
rosa_samantha	Rh1AG250900 Rh1BG221700 Rh1CG234700 Rh1DG248700 Rh4AG379000 Rh4BG391800 Rh4CG406300
rosa_wichuraiana	Rw1G021890 Rw4G032550 Rw4G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1246
Acc36I	ACCTGC	1 cut(s)	1246
AccB7I	CCANNNNNTGG	1 cut(s)	2003
AccBSI	CCGCTC	1 cut(s)	327
AccII	CGCG	2 cut(s)	1377, 1936
AccIII	TCCGGA	2 cut(s)	61, 1036
AciI	CCGC	5 cut(s)	68, 325, 1254, 1484, 1934
AclWI	GGATC	5 cut(s)	569, 630, 833, 1299, 1956
AcoI	YGGCCR	1 cut(s)	2382
AcsI	RAATTY	6 cut(s)	4, 832, 1467, 1666, 1732, 2128
AfaI	GTAC	6 cut(s)	33, 535, 983, 1086, 2326, 2470
AfiI	CCNNNNNNNGG	6 cut(s)	282, 1166, 2003, 2162, 2312, 2380
AflII	CTTAAG	1 cut(s)	2396
AflIII	ACRYGT	2 cut(s)	28, 771
AjnI	CCWGG	3 cut(s)	340, 1420, 2170
AjuI	GAANNNNNNNTTGG	2 cut(s)	2007, 2039
AleI	CACNNNNGTG	1 cut(s)	2332
Alw21I	GWGCWC	1 cut(s)	2487
Alw26I	GTCTC	7 cut(s)	672, 807, 853, 894, 1588, 2014, 2194
AlwI	GGATC	5 cut(s)	569, 630, 833, 1299, 1956
AlwNI	CAGNNNCTG	2 cut(s)	2224, 2294
Ama87I	CYCGRG	1 cut(s)	2521
Aor13HI	TCCGGA	2 cut(s)	61, 1036
AoxI	GGCC	2 cut(s)	570, 2382
ApoI	RAATTY	6 cut(s)	4, 832, 1467, 1666, 1732, 2128
ArsI	GACNNNNNNTTYG	2 cut(s)	314, 346
AseI	ATTAAT	1 cut(s)	2499
Asp700I	GAANNNNTTC	3 cut(s)	351, 606, 1733
AspLEI	GCGC	4 cut(s)	76, 185, 1377, 1994
AspS9I	GGNCC	4 cut(s)	98, 322, 761, 1039
AsuC2I	CCSGG	1 cut(s)	2090
AsuHPI	GGTGA	6 cut(s)	356, 560, 934, 1697, 1760, 2127
AsuII	TTCGAA	1 cut(s)	613
AvaI	CYCGRG	1 cut(s)	2521
AvaII	GGWCC	4 cut(s)	98, 322, 761, 1039
BarI	GAAGNNNNNNTAC	2 cut(s)	985, 1017
BbsI	GAAGAC	3 cut(s)	729, 1290, 1823
Bbv12I	GWGCWC	1 cut(s)	2487
BccI	CCATC	6 cut(s)	240, 748, 752, 1425, 2396, 2411
BceAI	ACGGC	2 cut(s)	29, 2397
BciT130I	CCWGG	3 cut(s)	342, 1422, 2172
BciVI	GTATCC	3 cut(s)	382, 1882, 2131
BclI	TGATCA	1 cut(s)	157
BcnI	CCSGG	1 cut(s)	2090
BcoDI	GTCTC	7 cut(s)	672, 807, 853, 894, 1588, 2014, 2194
BfaI	CTAG	6 cut(s)	21, 597, 1772, 1808, 1989, 2357
BfmI	CTRYAG	4 cut(s)	420, 1002, 1461, 2591
BfoI	RGCGCY	1 cut(s)	186
BfrI	CTTAAG	1 cut(s)	2396
BfuAI	ACCTGC	1 cut(s)	1246
BfuI	GTATCC	3 cut(s)	382, 1882, 2131
BglII	AGATCT	1 cut(s)	2065
Bme1390I	CCNGG	4 cut(s)	342, 1422, 2090, 2172
Bme18I	GGWCC	4 cut(s)	98, 322, 761, 1039
BmeT110I	CYCGRG	1 cut(s)	2521
BmgT120I	GGNCC	4 cut(s)	98, 322, 761, 1039
BmiI	GGNNCC	2 cut(s)	784, 1041
BmrFI	CCNGG	4 cut(s)	342, 1422, 2090, 2172
BmrI	ACTGGG	1 cut(s)	1297
BmsI	GCATC	5 cut(s)	229, 280, 1419, 1558, 1802
BmuI	ACTGGG	1 cut(s)	1297
BpiI	GAAGAC	3 cut(s)	729, 1290, 1823
BpmI	CTGGAG	5 cut(s)	128, 1080, 1518, 2025, 2271
Bpu10I	CCTNAGC	2 cut(s)	1011, 2481
Bpu14I	TTCGAA	1 cut(s)	613
BpuMI	CCSGG	1 cut(s)	2090
BsaBI	GATNNNNATC	1 cut(s)	132
BsaI	GGTCTC	1 cut(s)	672
BsaJI	CCNNGG	3 cut(s)	2088, 2171, 2520
BsaWI	WCCGGW	3 cut(s)	61, 1036, 1166
BsaXI	ACNNNNNCTCC	2 cut(s)	891, 921
Bsc4I	CCNNNNNNNGG	6 cut(s)	282, 1166, 2003, 2162, 2312, 2380
Bse118I	RCCGGY	1 cut(s)	34
Bse1I	ACTGG	5 cut(s)	300, 1257, 1292, 1747, 2288
Bse3DI	GCAATG	1 cut(s)	365
Bse8I	GATNNNNATC	1 cut(s)	132
BseAI	TCCGGA	2 cut(s)	61, 1036
BseBI	CCWGG	3 cut(s)	342, 1422, 2172
BseDI	CCNNGG	3 cut(s)	2088, 2171, 2520
BseGI	GGATG	7 cut(s)	241, 251, 592, 763, 1163, 2366, 2539
BseJI	GATNNNNATC	1 cut(s)	132
BseLI	CCNNNNNNNGG	6 cut(s)	282, 1166, 2003, 2162, 2312, 2380
BseMI	GCAATG	1 cut(s)	365
BseMII	CTCAG	6 cut(s)	1025, 1187, 1578, 1690, 2244, 2472
BseNI	ACTGG	5 cut(s)	300, 1257, 1292, 1747, 2288
BseRI	GAGGAG	4 cut(s)	1083, 1104, 1450, 1604
BsgI	GTGCAG	2 cut(s)	1212, 1224
Bsh1236I	CGCG	2 cut(s)	1377, 1936
Bsh1285I	CGRYCG	1 cut(s)	1934
BshFI	GGCC	2 cut(s)	572, 2384
BsiEI	CGRYCG	1 cut(s)	1934
BsiHKAI	GWGCWC	1 cut(s)	2487
BsiHKCI	CYCGRG	1 cut(s)	2521
BsiSI	CCGG	6 cut(s)	35, 62, 180, 1037, 1167, 2090
BslFI	GGGAC	1 cut(s)	688
BslI	CCNNNNNNNGG	6 cut(s)	282, 1166, 2003, 2162, 2312, 2380
BsmAI	GTCTC	7 cut(s)	672, 807, 853, 894, 1588, 2014, 2194
BsmBI	CGTCTC	1 cut(s)	853
BsmFI	GGGAC	1 cut(s)	688
BsmI	GAATGC	1 cut(s)	1693
BsnI	GGCC	2 cut(s)	572, 2384
Bso31I	GGTCTC	1 cut(s)	672
BsoBI	CYCGRG	1 cut(s)	2521
Bsp119I	TTCGAA	1 cut(s)	613
Bsp1286I	GDGCHC	1 cut(s)	2487
Bsp13I	TCCGGA	2 cut(s)	61, 1036
Bsp1407I	TGTACA	2 cut(s)	533, 2324
Bsp143I	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
BspACI	CCGC	5 cut(s)	68, 325, 1254, 1484, 1934
BspANI	GGCC	2 cut(s)	572, 2384
BspCNI	CTCAG	6 cut(s)	1024, 1186, 1579, 1689, 2243, 2473
BspEI	TCCGGA	2 cut(s)	61, 1036
BspFNI	CGCG	2 cut(s)	1377, 1936
BspHI	TCATGA	1 cut(s)	223
BspLI	GGNNCC	2 cut(s)	784, 1041
BspMAI	CTGCAG	1 cut(s)	424
BspMI	ACCTGC	1 cut(s)	1246
BspPI	GGATC	5 cut(s)	569, 630, 833, 1299, 1956
BspQI	GCTCTTC	1 cut(s)	1683
BspT104I	TTCGAA	1 cut(s)	613
BspTI	CTTAAG	1 cut(s)	2396
BspTNI	GGTCTC	1 cut(s)	672
BsrBI	CCGCTC	1 cut(s)	327
BsrDI	GCAATG	1 cut(s)	365
BsrFI	RCCGGY	1 cut(s)	34
BsrGI	TGTACA	2 cut(s)	533, 2324
BsrI	ACTGG	5 cut(s)	300, 1257, 1292, 1747, 2288
BssAI	RCCGGY	1 cut(s)	34
BssECI	CCNNGG	3 cut(s)	2088, 2171, 2520
BssMI	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
Bst2UI	CCWGG	3 cut(s)	342, 1422, 2172
Bst4CI	ACNGT	4 cut(s)	141, 986, 1611, 2080
Bst6I	CTCTTC	4 cut(s)	1313, 1683, 2043, 2445
BstAFI	CTTAAG	1 cut(s)	2396
BstAPI	GCANNNNNTGC	1 cut(s)	2000
BstAUI	TGTACA	2 cut(s)	533, 2324
BstBI	TTCGAA	1 cut(s)	613
BstDEI	CTNAG	8 cut(s)	729, 1011, 1173, 1263, 1587, 1676, 2230, 2481
BstF5I	GGATG	7 cut(s)	241, 251, 592, 763, 1163, 2366, 2539
BstFNI	CGCG	2 cut(s)	1377, 1936
BstH2I	RGCGCY	1 cut(s)	186
BstHHI	GCGC	4 cut(s)	76, 185, 1377, 1994
BstKTI	GATC	9 cut(s)	160, 541, 577, 625, 841, 1279, 1294, 1951, 2068
BstMAI	GTCTC	7 cut(s)	672, 807, 853, 894, 1588, 2014, 2194
BstMBI	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
BstMCI	CGRYCG	1 cut(s)	1934
BstMWI	GCNNNNNNNGC	5 cut(s)	152, 1007, 1787, 1847, 2000
BstNI	CCWGG	3 cut(s)	342, 1422, 2172
BstNSI	RCATGY	4 cut(s)	32, 381, 1544, 2555
BstSCI	CCNGG	4 cut(s)	340, 1420, 2088, 2170
BstSFI	CTRYAG	4 cut(s)	420, 1002, 1461, 2591
BstUI	CGCG	2 cut(s)	1377, 1936
BstV2I	GAAGAC	3 cut(s)	729, 1290, 1823
BstX2I	RGATCY	2 cut(s)	1948, 2065
BstXI	CCANNNNNNTGG	2 cut(s)	1555, 1926
BstYI	RGATCY	2 cut(s)	1948, 2065
BsuI	GTATCC	3 cut(s)	382, 1882, 2131
BsuRI	GGCC	2 cut(s)	572, 2384
BtsCI	GGATG	7 cut(s)	241, 251, 592, 763, 1163, 2366, 2539
BtsIMutI	CAGTG	2 cut(s)	293, 2489
BveI	ACCTGC	1 cut(s)	1246
CaiI	CAGNNNCTG	2 cut(s)	2224, 2294
CciI	TCATGA	1 cut(s)	223
CfoI	GCGC	4 cut(s)	76, 185, 1377, 1994
Cfr10I	RCCGGY	1 cut(s)	34
Cfr13I	GGNCC	4 cut(s)	98, 322, 761, 1039
CseI	GACGC	1 cut(s)	1956
Csp6I	GTAC	6 cut(s)	32, 534, 982, 1085, 2325, 2469
CspCI	CAANNNNNGTGG	2 cut(s)	1726, 1761
CviAII	CATG	7 cut(s)	29, 224, 378, 1044, 1204, 1541, 2552
CviQI	GTAC	6 cut(s)	32, 534, 982, 1085, 2325, 2469
DdeI	CTNAG	8 cut(s)	729, 1011, 1173, 1263, 1587, 1676, 2230, 2481
DpnI	GATC	9 cut(s)	159, 540, 576, 624, 840, 1278, 1293, 1950, 2067
DpnII	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
DraI	TTTAAA	2 cut(s)	412, 1912
EaeI	YGGCCR	1 cut(s)	2382
Eam1104I	CTCTTC	4 cut(s)	1313, 1683, 2043, 2445
EarI	CTCTTC	4 cut(s)	1313, 1683, 2043, 2445
EciI	GGCGGA	1 cut(s)	83
Eco31I	GGTCTC	1 cut(s)	672
Eco32I	GATATC	1 cut(s)	1959
Eco47I	GGWCC	4 cut(s)	98, 322, 761, 1039
Eco88I	CYCGRG	1 cut(s)	2521
EcoRI	GAATTC	1 cut(s)	2128
EcoRII	CCWGG	3 cut(s)	340, 1420, 2170
EcoRV	GATATC	1 cut(s)	1959
EcoT22I	ATGCAT	1 cut(s)	2557
Esp3I	CGTCTC	1 cut(s)	853
FaeI	CATG	7 cut(s)	32, 227, 381, 1047, 1207, 1544, 2555
FalI	AAGNNNNNCTT	4 cut(s)	1256, 1288, 1825, 1857
FaqI	GGGAC	1 cut(s)	688
FatI	CATG	7 cut(s)	28, 223, 377, 1043, 1203, 1540, 2551
FbaI	TGATCA	1 cut(s)	157
FokI	GGATG	7 cut(s)	248, 258, 599, 770, 1150, 2373, 2526
FspBI	CTAG	6 cut(s)	21, 597, 1772, 1808, 1989, 2357
GlaI	GCGC	4 cut(s)	75, 184, 1376, 1993
GsuI	CTGGAG	5 cut(s)	128, 1080, 1518, 2025, 2271
HaeII	RGCGCY	1 cut(s)	186
HaeIII	GGCC	2 cut(s)	572, 2384
HapII	CCGG	6 cut(s)	35, 62, 180, 1037, 1167, 2090
HgaI	GACGC	1 cut(s)	1956
HhaI	GCGC	4 cut(s)	76, 185, 1377, 1994
Hin1II	CATG	7 cut(s)	32, 227, 381, 1047, 1207, 1544, 2555
Hin6I	GCGC	4 cut(s)	74, 183, 1375, 1992
HinP1I	GCGC	4 cut(s)	74, 183, 1375, 1992
HincII	GTYRAC	2 cut(s)	26, 2585
HindII	GTYRAC	2 cut(s)	26, 2585
HindIII	AAGCTT	4 cut(s)	1270, 2262, 2280, 2393
HpaII	CCGG	6 cut(s)	35, 62, 180, 1037, 1167, 2090
HphI	GGTGA	6 cut(s)	356, 560, 934, 1697, 1760, 2127
Hpy166II	GTNNAC	8 cut(s)	26, 347, 1607, 1661, 1802, 2178, 2327, 2585
Hpy8I	GTNNAC	8 cut(s)	26, 347, 1607, 1661, 1802, 2178, 2327, 2585
Hpy99I	CGWCG	1 cut(s)	1343
HpyAV	CCTTC	8 cut(s)	236, 562, 617, 1400, 1514, 1820, 2121, 2148
HpyCH4III	ACNGT	4 cut(s)	141, 986, 1611, 2080
HpyCH4IV	ACGT	5 cut(s)	162, 228, 773, 846, 1083
HpyF10VI	GCNNNNNNNGC	5 cut(s)	152, 1007, 1787, 1847, 2000
HpyF3I	CTNAG	8 cut(s)	729, 1011, 1173, 1263, 1587, 1676, 2230, 2481
HpySE526I	ACGT	5 cut(s)	162, 228, 773, 846, 1083
Hsp92II	CATG	7 cut(s)	32, 227, 381, 1047, 1207, 1544, 2555
HspAI	GCGC	4 cut(s)	74, 183, 1375, 1992
Kpn2I	TCCGGA	2 cut(s)	61, 1036
Ksp22I	TGATCA	1 cut(s)	157
Kzo9I	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
LguI	GCTCTTC	1 cut(s)	1683
LmnI	GCTCC	2 cut(s)	332, 1372
LweI	GCATC	5 cut(s)	229, 280, 1419, 1558, 1802
MaeI	CTAG	6 cut(s)	21, 597, 1772, 1808, 1989, 2357
MaeII	ACGT	5 cut(s)	162, 228, 773, 846, 1083
MaeIII	GTNAC	4 cut(s)	1196, 1334, 1620, 1649
MalI	GATC	9 cut(s)	159, 540, 576, 624, 840, 1278, 1293, 1950, 2067
MbiI	CCGCTC	1 cut(s)	327
MboI	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
MfeI	CAATTG	2 cut(s)	150, 1626
MflI	RGATCY	2 cut(s)	1948, 2065
MhlI	GDGCHC	1 cut(s)	2487
MlyI	GAGTC	6 cut(s)	194, 701, 1330, 1904, 2016, 2161
MmeI	TCCRAC	1 cut(s)	145
Mph1103I	ATGCAT	1 cut(s)	2557
MroI	TCCGGA	2 cut(s)	61, 1036
MroXI	GAANNNNTTC	3 cut(s)	351, 606, 1733
MslI	CAYNNNNRTG	2 cut(s)	2332, 2359
MspCI	CTTAAG	1 cut(s)	2396
MspI	CCGG	6 cut(s)	35, 62, 180, 1037, 1167, 2090
MspR9I	CCNGG	4 cut(s)	342, 1422, 2090, 2172
MunI	CAATTG	2 cut(s)	150, 1626
Mva1269I	GAATGC	1 cut(s)	1693
MvaI	CCWGG	3 cut(s)	342, 1422, 2172
MvnI	CGCG	2 cut(s)	1377, 1936
MwoI	GCNNNNNNNGC	5 cut(s)	152, 1007, 1787, 1847, 2000
NciI	CCSGG	1 cut(s)	2090
NdeII	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
NlaIII	CATG	7 cut(s)	32, 227, 381, 1047, 1207, 1544, 2555
NlaIV	GGNNCC	2 cut(s)	784, 1041
NmeAIII	GCCGAG	1 cut(s)	2221
NmuCI	GTSAC	1 cut(s)	1649
NsiI	ATGCAT	1 cut(s)	2557
NspI	RCATGY	4 cut(s)	32, 381, 1544, 2555
NspV	TTCGAA	1 cut(s)	613
OliI	CACNNNNGTG	1 cut(s)	2332
PagI	TCATGA	1 cut(s)	223
PaqCI	CACCTGC	1 cut(s)	1246
PciI	ACATGT	1 cut(s)	28
PciSI	GCTCTTC	1 cut(s)	1683
PctI	GAATGC	1 cut(s)	1693
PdmI	GAANNNNTTC	3 cut(s)	351, 606, 1733
PfeI	GAWTC	7 cut(s)	128, 176, 256, 602, 743, 964, 2526
PflMI	CCANNNNNTGG	1 cut(s)	2003
PleI	GAGTC	6 cut(s)	194, 700, 1329, 1903, 2015, 2160
PpsI	GAGTC	6 cut(s)	194, 700, 1329, 1903, 2015, 2160
PscI	ACATGT	1 cut(s)	28
PshBI	ATTAAT	1 cut(s)	2499
Psp6I	CCWGG	3 cut(s)	340, 1420, 2170
PspGI	CCWGG	3 cut(s)	340, 1420, 2170
PspN4I	GGNNCC	2 cut(s)	784, 1041
PspPI	GGNCC	4 cut(s)	98, 322, 761, 1039
PstI	CTGCAG	1 cut(s)	424
PstNI	CAGNNNCTG	2 cut(s)	2224, 2294
PsuI	RGATCY	2 cut(s)	1948, 2065
RsaI	GTAC	6 cut(s)	33, 535, 983, 1086, 2326, 2470
RsaNI	GTAC	6 cut(s)	32, 534, 982, 1085, 2325, 2469
RseI	CAYNNNNRTG	2 cut(s)	2332, 2359
SapI	GCTCTTC	1 cut(s)	1683
Sau3AI	GATC	9 cut(s)	157, 538, 574, 622, 838, 1276, 1291, 1948, 2065
Sau96I	GGNCC	4 cut(s)	98, 322, 761, 1039
SchI	GAGTC	6 cut(s)	194, 701, 1330, 1904, 2016, 2161
ScrFI	CCNGG	4 cut(s)	342, 1422, 2090, 2172
SduI	GDGCHC	1 cut(s)	2487
SfaNI	GCATC	5 cut(s)	229, 280, 1419, 1558, 1802
SfcI	CTRYAG	4 cut(s)	420, 1002, 1461, 2591
SfuI	TTCGAA	1 cut(s)	613
SinI	GGWCC	4 cut(s)	98, 322, 761, 1039
SmiMI	CAYNNNNRTG	2 cut(s)	2332, 2359
SmlI	CTYRAG	1 cut(s)	2396
SmoI	CTYRAG	1 cut(s)	2396
SsiI	CCGC	5 cut(s)	68, 325, 1254, 1484, 1934
SspI	AATATT	2 cut(s)	645, 1552
SspMI	CTAG	6 cut(s)	21, 597, 1772, 1808, 1989, 2357
StyD4I	CCNGG	4 cut(s)	340, 1420, 2088, 2170
TaaI	ACNGT	4 cut(s)	141, 986, 1611, 2080
TaiI	ACGT	5 cut(s)	165, 231, 776, 849, 1086
TaqI	TCGA	3 cut(s)	613, 936, 1357
TaqII	GACCGA	1 cut(s)	2429
TatI	WGTACW	2 cut(s)	533, 2324
TauI	GCSGC	1 cut(s)	1256
TfiI	GAWTC	7 cut(s)	128, 176, 256, 602, 743, 964, 2526
TscAI	CASTG	2 cut(s)	300, 2496
TseFI	GTSAC	1 cut(s)	1649
Tsp45I	GTSAC	1 cut(s)	1649
TspRI	CASTG	2 cut(s)	300, 2496
Van91I	CCANNNNNTGG	1 cut(s)	2003
Vha464I	CTTAAG	1 cut(s)	2396
VpaK11BI	GGWCC	4 cut(s)	98, 322, 761, 1039
VspI	ATTAAT	1 cut(s)	2499
XapI	RAATTY	6 cut(s)	4, 832, 1467, 1666, 1732, 2128
XceI	RCATGY	4 cut(s)	32, 381, 1544, 2555
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1428
XmnI	GAANNNNTTC	3 cut(s)	351, 606, 1733
XspI	CTAG	6 cut(s)	21, 597, 1772, 1808, 1989, 2357
Zsp2I	ATGCAT	1 cut(s)	2557

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.