Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0003049

Physical Location & Seq

Genomic Coordinates Reverse (-)

54425444 .. 54429998

Gene Structure 4555 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG391800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGAATTTATTTAGAATATCTAGTCAACATGTACAACGTGTACCGGCTGCTGCTGAGCAGCCGGCAGTTTATGAACCACCTCCAGAGGCGCAGCTTCCCCCGAAACCAGCAGGACCAACTCTGGAGGGTTTAATTGCTGAAGATTCATATCCACAGTATTCTGCAATTGCTGATCACGTTCGAGAAAATGAATCCGGAGTTGAACATGGCGCTGGTGCAAAGAACGACTCATCTGTTATAGCAAAGCATCATGACGTTTCGGATGAGGAAGGATGGATTTCAATTCCATACAAAGAACTCCCCAATAATTGGAATGATGCACTGGATATACAATCATTACGCTCTATGGACCGCTCCTTTGTTTTTCCCGGTGAACAAGTTCATATCCTTGCATTGCTGTCAGCATGTAAGCAGGATACAGAAATTATTACTCCTTTTAAATTAGCTGCAGCTATGAATAAAAATGGCTTAAAGCAAAGCCCAACGAAGCAAAATGGGAATGTGGAAGATGAAAATGATACATTGTCAAGAAAAGGAGAAAGTAGTCCTGATAGTCAAGGTACAGATCAAAATGGTGAAACCCTGTCAAAAGAGAAGGCTGATCCACAAAAGGATGTTTCTGCTAGTGAATCCCTTCTTCGAATGGAGGATCACAAAAGACAAACTGAAATATTATTGCAAAGATTTGAGAGGTCTCATTTTTTTGTTAGGATTGCGGAGTCAGGTGAGTCCCTTTGGTCAAAAAAGGGTTCTTCTAAGAAGTCTTCAGAATCTTCTGAGATGGATGGTCTAGAGGCCACGGAAAATGGAACCCAGAAAAGTGCATTGTCTCAACTCAATGCCATTGTTGATAAAGGAAATTTTGATCCCAACGTCTCTGGTGGTGTAGCAAGAAATAATGTCAAGTGTTGCTCTCTTTCTAATGGAGACATAGTGGTTCTTTTACAGGTGAATGTTGGTGTAGATTTTTTGAATGACCCTGTTATTGAGATTCTTCAGTTTGAGAAGTACCGTGAGAGAAGTTTGTCTACAGAGGCTCAGGAGAACTTGGTTTATGCAAATCCGGACCCATGTGGAGAGTTGTTAAAATGGCTGCTTCCTTTGGATAACGTACTTCCTCCTCCAGCTCGTCCTTTATCTCCTCCTTTAACTTCCAATTCAGGAATTGGTGGCACACCTCAAAAGCCCACATCCGGTTCTCAGATTTTCTCCCATTTTAGAAGTTACTCCATGTCATCACTACCACAAAATACTACACAACCACCTGCACCTATTAAAGCCGCCGGTTCTAAGCCAAGCTTTGATCTTGAAGACTGGGATCAGTTTTCATCTCTGAAGCTCTTGAAGAGTCAAAAAGCTGGTTACGACGGGCTTTTATCTTTTCGAGGTGTGTCATTGGAGCGCGAAAGATTTTCTGTTCGTTGTGGATTGGAAGGCATCTATACACCAGGAAGAAGATGGAGGAGAAAACTTGAAATCATACAACCTGTAGAAATTCATTCTTTTGCTGCGGACTGCAATACAGATGACCTTCTCTGTGTCCAGATAAAGAATGTTTCTCCAGCACATGCACCAAATAGTGGAAGTGACCATAGTTTACCAAATTTAGCACTCAGGAGAGGTGAAGAGCATTCTTTTATTCTTAAACCAGCAACAACCCTGTGGAAGAATGGAAGAATTTCAAGACTGGTGACTGCTGAAGGAAAAGCTGCTTCAACTGCTGACCAGTATGCAATTATGGTATCCTGTCGGTGCAACTACACGGAGTCAAGATTGTTTTTTAAACAGCCAACAAGTTGGCGACCGCGTATTTCAAGGGATCTTATGATATCTGTTGCGTCTGAAATGTCTGGACAATCTAGTGCACCAAATGCTGGAGTCTCCCAACTTCCTGTTCAGGTCTTAACTCTTCAGGCTTCAAACTTAACAACTGAAGATCTATCTCTGACGGTTCTTGCCCCGGCTTCATTTACTTCACCACCTTCAGTCGTATCCTTGAATTCTTCACCTTCTTCTCCAATGAGTCCATTTGTTGGTTTTCCTGGGTTTACAGGAAGAACAACTGCCGAGAGACATAACTCTACAATGCAGAGGCTGAACTCAGCACCCTCTATATTGACAAATCAGAAACAAGCTTCTTCTAATGAACAAGCTTCTCCAGTATCTGATGTTGTTCCTAGTGCTGGTTTAGGTTGTACACATTTGTGGCTTCAGAGTAGAGTTCCACTAGGATGTGTTCCCTCCCAATCTACGGCCACCATCAAGCTTGAGCTACTTCCATTGACCGATGGCATAATTACGCTGGACACTCTTCAGATTGATGTCAAGGAAAAAGGTCGTACTTACATACCTGAGCACTCGCTGAAGATTAATGCCACTTCCAGTATTTCCTCGGGGATTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

801

Amino Acids

87.19

Weight (kDa)

5.83

Isoelectric Point (pI)

56.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17900 AT3G17900
fragaria_vesca	FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960
malus_domestica	MD13G1079000.v1.1 MD16G1078700.v1.1
prunus_persica	Prupe.1G267800_v2.0.a1 Prupe.1G267800_v2.0.a1
pyrus_communis	pycom13g06860 pycom16g06810
rosa_chinensis	RchiOBHm_Chr1g0331861 RchiOBHm_Chr1g0331881 RchiOBHm_Chr1g0353921 RchiOBHm_Chr4g0440641
rosa_laevigata	RLG00000006164 RLG00000029707
rosa_multiflora	Rmu_co8243009.1_g000001 Rmu_sc0001915.1_g000004 Rmu_sc0005552.1_g000001 Rmu_sc0007658.1_g000002 Rmu_sc0008018.1_g000005
rosa_roxburghii	Rroxscaffold_4G00301470 Rroxscaffold_5G00381450
rosa_rugosa	Rorug01G0239400 Rorug04G0327100
rosa_samantha	Rh1AG250900 Rh1BG221700 Rh1CG234700 Rh1DG248700 Rh4AG379000 Rh4BG391800 Rh4CG406300
rosa_wichuraiana	Rw1G021890 Rw4G032550 Rw4G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1273
Acc36I	ACCTGC	1 cut(s)	1273
AccB7I	CCANNNNNTGG	4 cut(s)	309, 1580, 1874, 2033
AccBSI	CCGCTC	1 cut(s)	354
AccI	GTMKAC	1 cut(s)	1028
AccII	CGCG	2 cut(s)	1404, 1807
AccIII	TCCGGA	2 cut(s)	194, 1063
AciI	CCGC	5 cut(s)	352, 716, 1281, 1511, 1805
AclWI	GGATC	5 cut(s)	596, 657, 860, 1326, 1827
AcoI	YGGCCR	1 cut(s)	2253
AcsI	RAATTY	6 cut(s)	4, 859, 1494, 1603, 1677, 1999
AfaI	GTAC	7 cut(s)	33, 42, 562, 1010, 1113, 2197, 2341
AfiI	CCNNNNNNNGG	7 cut(s)	309, 1193, 1580, 1874, 2033, 2183, 2251
AflIII	ACRYGT	2 cut(s)	28, 37
AjnI	CCWGG	2 cut(s)	1447, 2041
AjuI	GAANNNNNNNTTGG	2 cut(s)	1878, 1910
AleI	CACNNNNGTG	1 cut(s)	2203
Alw21I	GWGCWC	2 cut(s)	1867, 2358
Alw26I	GTCTC	6 cut(s)	699, 834, 880, 921, 1885, 2065
Alw44I	GTGCAC	1 cut(s)	1863
AlwI	GGATC	5 cut(s)	596, 657, 860, 1326, 1827
AlwNI	CAGNNNCTG	2 cut(s)	2095, 2165
Ama87I	CYCGRG	1 cut(s)	2392
Aor13HI	TCCGGA	2 cut(s)	194, 1063
AoxI	GGCC	2 cut(s)	795, 2253
ApaLI	GTGCAC	1 cut(s)	1863
ApeKI	GCWGC	9 cut(s)	47, 50, 58, 91, 446, 449, 1093, 1508, 1709
ApoI	RAATTY	6 cut(s)	4, 859, 1494, 1603, 1677, 1999
ArsI	GACNNNNNNTTYG	2 cut(s)	341, 373
AseI	ATTAAT	1 cut(s)	2370
Asp700I	GAANNNNTTC	3 cut(s)	378, 633, 1678
AspLEI	GCGC	3 cut(s)	91, 212, 1404
AspS9I	GGNCC	3 cut(s)	113, 349, 1066
AsuC2I	CCSGG	2 cut(s)	369, 1961
AsuHPI	GGTGA	8 cut(s)	383, 587, 737, 961, 1634, 1702, 1968, 1998
AsuII	TTCGAA	1 cut(s)	640
AvaI	CYCGRG	1 cut(s)	2392
AvaII	GGWCC	3 cut(s)	113, 349, 1066
BaeGI	GKGCMC	1 cut(s)	1867
BarI	GAAGNNNNNNTAC	2 cut(s)	1012, 1044
BbsI	GAAGAC	2 cut(s)	756, 1317
Bbv12I	GWGCWC	2 cut(s)	1867, 2358
BbvI	GCAGC	9 cut(s)	34, 37, 70, 103, 433, 461, 1080, 1495, 1696
BccI	CCATC	6 cut(s)	267, 775, 779, 1452, 2267, 2282
BceAI	ACGGC	1 cut(s)	2268
BciT130I	CCWGG	2 cut(s)	1449, 2043
BciVI	GTATCC	3 cut(s)	409, 1753, 2002
BclI	TGATCA	1 cut(s)	172
BcnI	CCSGG	2 cut(s)	369, 1961
BcoDI	GTCTC	6 cut(s)	699, 834, 880, 921, 1885, 2065
BfaI	CTAG	6 cut(s)	21, 624, 791, 1860, 2178, 2228
BfmI	CTRYAG	3 cut(s)	447, 1029, 1488
BfoI	RGCGCY	1 cut(s)	213
BfuAI	ACCTGC	1 cut(s)	1273
BfuI	GTATCC	3 cut(s)	409, 1753, 2002
BglII	AGATCT	1 cut(s)	1936
BlpI	GCTNAGC	1 cut(s)	54
Bme1390I	CCNGG	4 cut(s)	369, 1449, 1961, 2043
Bme18I	GGWCC	3 cut(s)	113, 349, 1066
BmeT110I	CYCGRG	1 cut(s)	2392
BmgT120I	GGNCC	3 cut(s)	113, 349, 1066
BmiI	GGNNCC	2 cut(s)	811, 1068
BmrFI	CCNGG	4 cut(s)	369, 1449, 1961, 2043
BmrI	ACTGGG	1 cut(s)	1324
BmsI	GCATC	3 cut(s)	256, 307, 1446
BmuI	ACTGGG	1 cut(s)	1324
BpiI	GAAGAC	2 cut(s)	756, 1317
BpmI	CTGGAG	6 cut(s)	66, 143, 1107, 1545, 1896, 2142
Bpu10I	CCTNAGC	2 cut(s)	1038, 2352
Bpu1102I	GCTNAGC	1 cut(s)	54
Bpu14I	TTCGAA	1 cut(s)	640
BpuEI	CTTGAG	1 cut(s)	2288
BpuMI	CCSGG	2 cut(s)	369, 1961
BsaBI	GATNNNNATC	1 cut(s)	147
BsaI	GGTCTC	1 cut(s)	699
BsaJI	CCNNGG	4 cut(s)	798, 1959, 2042, 2391
BsaWI	WCCGGW	3 cut(s)	194, 1063, 1193
BsaXI	ACNNNNNCTCC	2 cut(s)	918, 948
Bsc4I	CCNNNNNNNGG	7 cut(s)	309, 1193, 1580, 1874, 2033, 2183, 2251
Bse118I	RCCGGY	3 cut(s)	43, 61, 1283
Bse1I	ACTGG	6 cut(s)	327, 1319, 1692, 1726, 2159, 2382
Bse3DI	GCAATG	1 cut(s)	392
Bse8I	GATNNNNATC	1 cut(s)	147
BseAI	TCCGGA	2 cut(s)	194, 1063
BseBI	CCWGG	2 cut(s)	1449, 2043
BseDI	CCNNGG	4 cut(s)	798, 1959, 2042, 2391
BseGI	GGATG	6 cut(s)	268, 278, 619, 790, 1190, 2237
BseJI	GATNNNNATC	1 cut(s)	147
BseLI	CCNNNNNNNGG	7 cut(s)	309, 1193, 1580, 1874, 2033, 2183, 2251
BseMI	GCAATG	1 cut(s)	392
BseMII	CTCAG	7 cut(s)	45, 768, 1052, 1214, 1627, 2115, 2343
BseNI	ACTGG	6 cut(s)	327, 1319, 1692, 1726, 2159, 2382
BseRI	GAGGAG	3 cut(s)	1110, 1131, 1477
BseSI	GKGCMC	1 cut(s)	1867
BseXI	GCAGC	9 cut(s)	34, 37, 70, 103, 433, 461, 1080, 1495, 1696
BsgI	GTGCAG	1 cut(s)	1251
Bsh1236I	CGCG	2 cut(s)	1404, 1807
Bsh1285I	CGRYCG	1 cut(s)	1805
BshFI	GGCC	2 cut(s)	797, 2255
BsiEI	CGRYCG	1 cut(s)	1805
BsiHKAI	GWGCWC	2 cut(s)	1867, 2358
BsiHKCI	CYCGRG	1 cut(s)	2392
BsiSI	CCGG	8 cut(s)	44, 62, 195, 369, 1064, 1194, 1284, 1961
BslFI	GGGAC	1 cut(s)	715
BslI	CCNNNNNNNGG	7 cut(s)	309, 1193, 1580, 1874, 2033, 2183, 2251
BsmAI	GTCTC	6 cut(s)	699, 834, 880, 921, 1885, 2065
BsmBI	CGTCTC	1 cut(s)	880
BsmFI	GGGAC	1 cut(s)	715
BsmI	GAATGC	1 cut(s)	1630
BsnI	GGCC	2 cut(s)	797, 2255
Bso31I	GGTCTC	1 cut(s)	699
BsoBI	CYCGRG	1 cut(s)	2392
Bsp119I	TTCGAA	1 cut(s)	640
Bsp1286I	GDGCHC	2 cut(s)	1867, 2358
Bsp13I	TCCGGA	2 cut(s)	194, 1063
Bsp1407I	TGTACA	2 cut(s)	31, 2195
Bsp143I	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
Bsp1720I	GCTNAGC	1 cut(s)	54
BspACI	CCGC	5 cut(s)	352, 716, 1281, 1511, 1805
BspANI	GGCC	2 cut(s)	797, 2255
BspCNI	CTCAG	7 cut(s)	46, 769, 1051, 1213, 1626, 2114, 2344
BspEI	TCCGGA	2 cut(s)	194, 1063
BspFNI	CGCG	2 cut(s)	1404, 1807
BspHI	TCATGA	1 cut(s)	250
BspLI	GGNNCC	2 cut(s)	811, 1068
BspMAI	CTGCAG	1 cut(s)	451
BspMI	ACCTGC	1 cut(s)	1273
BspPI	GGATC	5 cut(s)	596, 657, 860, 1326, 1827
BspQI	GCTCTTC	1 cut(s)	1620
BspT104I	TTCGAA	1 cut(s)	640
BspTNI	GGTCTC	1 cut(s)	699
BsrBI	CCGCTC	1 cut(s)	354
BsrDI	GCAATG	1 cut(s)	392
BsrFI	RCCGGY	3 cut(s)	43, 61, 1283
BsrGI	TGTACA	2 cut(s)	31, 2195
BsrI	ACTGG	6 cut(s)	327, 1319, 1692, 1726, 2159, 2382
BssAI	RCCGGY	3 cut(s)	43, 61, 1283
BssECI	CCNNGG	4 cut(s)	798, 1959, 2042, 2391
BssMI	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
Bst2UI	CCWGG	2 cut(s)	1449, 2043
Bst4CI	ACNGT	3 cut(s)	156, 1013, 1951
Bst6I	CTCTTC	4 cut(s)	1340, 1620, 1914, 2316
BstAPI	GCANNNNNTGC	1 cut(s)	1871
BstAUI	TGTACA	2 cut(s)	31, 2195
BstBI	TTCGAA	1 cut(s)	640
BstC8I	GCNNGC	1 cut(s)	63
BstDEI	CTNAG	9 cut(s)	54, 756, 777, 1038, 1200, 1290, 1613, 2101, 2352
BstDSI	CCRYGG	1 cut(s)	798
BstF5I	GGATG	6 cut(s)	268, 278, 619, 790, 1190, 2237
BstFNI	CGCG	2 cut(s)	1404, 1807
BstH2I	RGCGCY	1 cut(s)	213
BstHHI	GCGC	3 cut(s)	91, 212, 1404
BstKTI	GATC	9 cut(s)	175, 568, 604, 652, 868, 1306, 1321, 1822, 1939
BstMAI	GTCTC	6 cut(s)	699, 834, 880, 921, 1885, 2065
BstMBI	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
BstMCI	CGRYCG	1 cut(s)	1805
BstMWI	GCNNNNNNNGC	2 cut(s)	1718, 1871
BstNI	CCWGG	2 cut(s)	1449, 2043
BstNSI	RCATGY	3 cut(s)	32, 408, 1571
BstSCI	CCNGG	4 cut(s)	367, 1447, 1959, 2041
BstSFI	CTRYAG	3 cut(s)	447, 1029, 1488
BstSLI	GKGCMC	1 cut(s)	1867
BstUI	CGCG	2 cut(s)	1404, 1807
BstV1I	GCAGC	9 cut(s)	34, 37, 70, 103, 433, 461, 1080, 1495, 1696
BstV2I	GAAGAC	2 cut(s)	756, 1317
BstX2I	RGATCY	2 cut(s)	1819, 1936
BstXI	CCANNNNNNTGG	1 cut(s)	1797
BstYI	RGATCY	2 cut(s)	1819, 1936
BsuI	GTATCC	3 cut(s)	409, 1753, 2002
BsuRI	GGCC	2 cut(s)	797, 2255
BtgI	CCRYGG	1 cut(s)	798
BtsCI	GGATG	6 cut(s)	268, 278, 619, 790, 1190, 2237
BtsIMutI	CAGTG	1 cut(s)	320
BveI	ACCTGC	1 cut(s)	1273
Cac8I	GCNNGC	1 cut(s)	63
CaiI	CAGNNNCTG	2 cut(s)	2095, 2165
CciI	TCATGA	1 cut(s)	250
CfoI	GCGC	3 cut(s)	91, 212, 1404
Cfr10I	RCCGGY	3 cut(s)	43, 61, 1283
Cfr13I	GGNCC	3 cut(s)	113, 349, 1066
CseI	GACGC	1 cut(s)	1827
Csp6I	GTAC	7 cut(s)	32, 41, 561, 1009, 1112, 2196, 2340
CviAII	CATG	7 cut(s)	29, 206, 251, 405, 1071, 1231, 1568
CviQI	GTAC	7 cut(s)	32, 41, 561, 1009, 1112, 2196, 2340
DdeI	CTNAG	9 cut(s)	54, 756, 777, 1038, 1200, 1290, 1613, 2101, 2352
DpnI	GATC	9 cut(s)	174, 567, 603, 651, 867, 1305, 1320, 1821, 1938
DpnII	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
DraI	TTTAAA	2 cut(s)	439, 1783
EaeI	YGGCCR	1 cut(s)	2253
Eam1104I	CTCTTC	4 cut(s)	1340, 1620, 1914, 2316
EarI	CTCTTC	4 cut(s)	1340, 1620, 1914, 2316
Eco31I	GGTCTC	1 cut(s)	699
Eco32I	GATATC	1 cut(s)	1830
Eco47I	GGWCC	3 cut(s)	113, 349, 1066
Eco88I	CYCGRG	1 cut(s)	2392
EcoRI	GAATTC	1 cut(s)	1999
EcoRII	CCWGG	2 cut(s)	1447, 2041
EcoRV	GATATC	1 cut(s)	1830
Esp3I	CGTCTC	1 cut(s)	880
FaeI	CATG	7 cut(s)	32, 209, 254, 408, 1074, 1234, 1571
FalI	AAGNNNNNCTT	2 cut(s)	1283, 1315
FaqI	GGGAC	1 cut(s)	715
FatI	CATG	7 cut(s)	28, 205, 250, 404, 1070, 1230, 1567
FbaI	TGATCA	1 cut(s)	172
FblI	GTMKAC	1 cut(s)	1028
FokI	GGATG	6 cut(s)	275, 285, 626, 797, 1177, 2244
FspBI	CTAG	6 cut(s)	21, 624, 791, 1860, 2178, 2228
GlaI	GCGC	3 cut(s)	90, 211, 1403
GsuI	CTGGAG	6 cut(s)	66, 143, 1107, 1545, 1896, 2142
HaeII	RGCGCY	1 cut(s)	213
HaeIII	GGCC	2 cut(s)	797, 2255
HapII	CCGG	8 cut(s)	44, 62, 195, 369, 1064, 1194, 1284, 1961
HgaI	GACGC	1 cut(s)	1827
HhaI	GCGC	3 cut(s)	91, 212, 1404
Hin1II	CATG	7 cut(s)	32, 209, 254, 408, 1074, 1234, 1571
Hin6I	GCGC	3 cut(s)	89, 210, 1402
HinP1I	GCGC	3 cut(s)	89, 210, 1402
HincII	GTYRAC	1 cut(s)	26
HindII	GTYRAC	1 cut(s)	26
HindIII	AAGCTT	4 cut(s)	1297, 2133, 2151, 2264
HpaII	CCGG	8 cut(s)	44, 62, 195, 369, 1064, 1194, 1284, 1961
HphI	GGTGA	8 cut(s)	383, 587, 737, 961, 1634, 1702, 1968, 1998
Hpy166II	GTNNAC	8 cut(s)	26, 41, 374, 1029, 1598, 1865, 2049, 2198
Hpy8I	GTNNAC	8 cut(s)	26, 41, 374, 1029, 1598, 1865, 2049, 2198
Hpy99I	CGWCG	1 cut(s)	1370
HpyAV	CCTTC	8 cut(s)	263, 589, 644, 1427, 1541, 1694, 1992, 2019
HpyCH4III	ACNGT	3 cut(s)	156, 1013, 1951
HpyCH4IV	ACGT	5 cut(s)	37, 177, 255, 873, 1110
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1718, 1871
HpyF3I	CTNAG	9 cut(s)	54, 756, 777, 1038, 1200, 1290, 1613, 2101, 2352
HpySE526I	ACGT	5 cut(s)	37, 177, 255, 873, 1110
Hsp92II	CATG	7 cut(s)	32, 209, 254, 408, 1074, 1234, 1571
HspAI	GCGC	3 cut(s)	89, 210, 1402
Kpn2I	TCCGGA	2 cut(s)	194, 1063
KroI	GCCGGC	1 cut(s)	61
KroNI	GCCGGC	1 cut(s)	63
Ksp22I	TGATCA	1 cut(s)	172
Kzo9I	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
LguI	GCTCTTC	1 cut(s)	1620
LmnI	GCTCC	2 cut(s)	359, 1399
Lsp1109I	GCAGC	9 cut(s)	34, 37, 70, 103, 433, 461, 1080, 1495, 1696
LweI	GCATC	3 cut(s)	256, 307, 1446
MaeI	CTAG	6 cut(s)	21, 624, 791, 1860, 2178, 2228
MaeII	ACGT	5 cut(s)	37, 177, 255, 873, 1110
MaeIII	GTNAC	4 cut(s)	1223, 1361, 1586, 1690
MalI	GATC	9 cut(s)	174, 567, 603, 651, 867, 1305, 1320, 1821, 1938
MbiI	CCGCTC	1 cut(s)	354
MboI	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
MfeI	CAATTG	1 cut(s)	165
MflI	RGATCY	2 cut(s)	1819, 1936
MhlI	GDGCHC	2 cut(s)	1867, 2358
MlyI	GAGTC	7 cut(s)	221, 728, 737, 1357, 1775, 1887, 2032
MroI	TCCGGA	2 cut(s)	194, 1063
MroNI	GCCGGC	1 cut(s)	61
MroXI	GAANNNNTTC	3 cut(s)	378, 633, 1678
MslI	CAYNNNNRTG	2 cut(s)	2203, 2230
MspI	CCGG	8 cut(s)	44, 62, 195, 369, 1064, 1194, 1284, 1961
MspR9I	CCNGG	4 cut(s)	369, 1449, 1961, 2043
MunI	CAATTG	1 cut(s)	165
Mva1269I	GAATGC	1 cut(s)	1630
MvaI	CCWGG	2 cut(s)	1449, 2043
MvnI	CGCG	2 cut(s)	1404, 1807
MwoI	GCNNNNNNNGC	2 cut(s)	1718, 1871
NaeI	GCCGGC	1 cut(s)	63
NciI	CCSGG	2 cut(s)	369, 1961
NdeII	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
NgoMIV	GCCGGC	1 cut(s)	61
NlaIII	CATG	7 cut(s)	32, 209, 254, 408, 1074, 1234, 1571
NlaIV	GGNNCC	2 cut(s)	811, 1068
NmeAIII	GCCGAG	1 cut(s)	2092
NmuCI	GTSAC	2 cut(s)	1586, 1690
NspI	RCATGY	3 cut(s)	32, 408, 1571
NspV	TTCGAA	1 cut(s)	640
OliI	CACNNNNGTG	1 cut(s)	2203
PagI	TCATGA	1 cut(s)	250
PaqCI	CACCTGC	1 cut(s)	1273
PciI	ACATGT	1 cut(s)	28
PciSI	GCTCTTC	1 cut(s)	1620
PctI	GAATGC	1 cut(s)	1630
PdiI	GCCGGC	1 cut(s)	63
PdmI	GAANNNNTTC	3 cut(s)	378, 633, 1678
PfeI	GAWTC	6 cut(s)	143, 191, 629, 770, 991, 2398
PflMI	CCANNNNNTGG	4 cut(s)	309, 1580, 1874, 2033
PleI	GAGTC	7 cut(s)	221, 727, 736, 1356, 1774, 1886, 2031
PpsI	GAGTC	7 cut(s)	221, 727, 736, 1356, 1774, 1886, 2031
PscI	ACATGT	1 cut(s)	28
PshBI	ATTAAT	1 cut(s)	2370
Psp6I	CCWGG	2 cut(s)	1447, 2041
PspGI	CCWGG	2 cut(s)	1447, 2041
PspN4I	GGNNCC	2 cut(s)	811, 1068
PspPI	GGNCC	3 cut(s)	113, 349, 1066
PstI	CTGCAG	1 cut(s)	451
PstNI	CAGNNNCTG	2 cut(s)	2095, 2165
PsuI	RGATCY	2 cut(s)	1819, 1936
RsaI	GTAC	7 cut(s)	33, 42, 562, 1010, 1113, 2197, 2341
RsaNI	GTAC	7 cut(s)	32, 41, 561, 1009, 1112, 2196, 2340
RseI	CAYNNNNRTG	2 cut(s)	2203, 2230
SapI	GCTCTTC	1 cut(s)	1620
Sau3AI	GATC	9 cut(s)	172, 565, 601, 649, 865, 1303, 1318, 1819, 1936
Sau96I	GGNCC	3 cut(s)	113, 349, 1066
SchI	GAGTC	7 cut(s)	221, 728, 737, 1357, 1775, 1887, 2032
ScrFI	CCNGG	4 cut(s)	369, 1449, 1961, 2043
SduI	GDGCHC	2 cut(s)	1867, 2358
SfaNI	GCATC	3 cut(s)	256, 307, 1446
SfcI	CTRYAG	3 cut(s)	447, 1029, 1488
SfuI	TTCGAA	1 cut(s)	640
SinI	GGWCC	3 cut(s)	113, 349, 1066
SmiMI	CAYNNNNRTG	2 cut(s)	2203, 2230
SmlI	CTYRAG	1 cut(s)	2267
SmoI	CTYRAG	1 cut(s)	2267
SsiI	CCGC	5 cut(s)	352, 716, 1281, 1511, 1805
SspI	AATATT	1 cut(s)	672
SspMI	CTAG	6 cut(s)	21, 624, 791, 1860, 2178, 2228
StyD4I	CCNGG	4 cut(s)	367, 1447, 1959, 2041
TaaI	ACNGT	3 cut(s)	156, 1013, 1951
TaiI	ACGT	5 cut(s)	40, 180, 258, 876, 1113
TaqI	TCGA	3 cut(s)	181, 640, 1384
TaqII	GACCGA	1 cut(s)	2300
TatI	WGTACW	2 cut(s)	31, 2195
TauI	GCSGC	1 cut(s)	1283
TfiI	GAWTC	6 cut(s)	143, 191, 629, 770, 991, 2398
TscAI	CASTG	1 cut(s)	327
TseFI	GTSAC	2 cut(s)	1586, 1690
TseI	GCWGC	9 cut(s)	47, 50, 58, 91, 446, 449, 1093, 1508, 1709
Tsp45I	GTSAC	2 cut(s)	1586, 1690
TspGWI	ACGGA	2 cut(s)	815, 1778
TspRI	CASTG	1 cut(s)	327
Van91I	CCANNNNNTGG	4 cut(s)	309, 1580, 1874, 2033
VneI	GTGCAC	1 cut(s)	1863
VpaK11BI	GGWCC	3 cut(s)	113, 349, 1066
VspI	ATTAAT	1 cut(s)	2370
XapI	RAATTY	6 cut(s)	4, 859, 1494, 1603, 1677, 1999
XbaI	TCTAGA	1 cut(s)	790
XceI	RCATGY	3 cut(s)	32, 408, 1571
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1455
XmiI	GTMKAC	1 cut(s)	1028
XmnI	GAANNNNTTC	3 cut(s)	378, 633, 1678
XspI	CTAG	6 cut(s)	21, 624, 791, 1860, 2178, 2228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.