Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0003049

Physical Location & Seq

Genomic Coordinates Reverse (-)

46567767 .. 46577806

Gene Structure 10040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG250900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGAATTTATTTAGAATATCTAGTCAACATGTACAACATGTACCGGCTGCTGCCGTTTATGAACCACCTCCGGAGGCGCAGCTTCCCCCGAAACCAGCAGGACCAACTCTGGAGAGTTTAATTGCTGAAGATTCATATCCACAGTATGCTGCAATTGCTGATCACGTTGGAGAAAATGAATCCAGAGTTGAACATGGCGCTGGTGCAAAGCACGACTCATCTGTTATAGCAAAGCATCATGACGTTTCGGATGAGGAAGGATGGATTGCGATTCCATACAAAGAACTCCCCGATAATTGGAATGATGCACCGGATATACAATCATTACGCTCTATGGACCGCTCCTTTGTTTTTCCTGGTGAACAAGTTCATATCCTTGCATTGCTGTCAGCATGTAAGCAGGATACAGAAATTATTACTCCTTTTAAATTAGCTGCAGCTATGAATAAAAATGGCTTAAAGCAAAGCCCAACGAAGCAAAATGGGAATGTGGAAGATGAAAATGATACATTGTCAAGAAAAGGAGAAAGTAGTCCTGATAGTCAAGGTACAGATCAAAATGGTGAAACCCTGTCAAAAGAGAAGGCTGATCCACAAAAGGATGTTTCTGCTAGTGAATCCCTTCTTCGAATGGAGGATCACAAAAGACAAACTGAAATATTATTGCAAAGATTTGAGAGGTCTCATTTTTTTGTTAGGATTGCGGAGTCAGGTGAGTCCCTTTGGTCAAAAAAGGGTTCTTCTAAGAAGTCTTCAGAATCTTCTGAGATGGATGGTCCAGAGGACACGTTAAATGGAACCCAGAAAAGTGCATTGTCTCAACTCAATGCCATTGTTGATAAAGGAAATTTTGATCCCAACGTCTCTGGTGGTGTAGCAAGAAATAATGTCAAGTGTTGCTCTCTTTCTAATGGAGACATAGTGGTTCTTTTACAGGTGAATGTTGGTGTAGATTTTTTGAATGACCCTGTTATTGAGATTCTTCAGTTTGAGAAGTACCATGAGAGAGGTTTGTCTACAGAGGCTCAGGAGAACTTGGTTTATGCAAATCCAGACCCATGTGGAGAGTTGTTAAAATGGCTGCTTCCGTTGGATAACGTACTTCCTCCTCCAGCTCGTCCTTTATCTCCTCCTTTAACTTCTGATTCAGGAATTGGTGGCACACCTCAAAAGCCCACATCCGGTTCTCAGATTTTCTCCCATTTTAGAAGTTACTCCATGTCATCGCTACCACAAAATACTACACAACCACCTGCACCTATTAAAGCCGCCAGTTCTAAGCCAAGCTTTGATCTTGAAGACTGGGATCAGTTTTCATCTCTGAAGCTCTTGAAGAGTCAAAAAGCTGGTTACGACGGGCTTTTATCTTTTCGAGGTGTGTCATTGGAGCGCGAAAGGTTTTCTGTTCGTTGTGGATTGGAAGGAATCTATACACCAGGAAGAAGATGGAGGAGAAAACTTGAAATCATACAACCTGTAGAAATTCATTCTTTTGCTGCAGACTGCAATACAGATGACCTTCTCTGTGTCCAGATAAAGAATGTTTCTCCAGCACATGCACCCAATATTGTGGTGTATGTAGATGCTATAACGATTGTCTCTGAGGAGGCTTCAAAGGGTGGACAGTCTGTATCGTTACCAATTGTATGTGTGGAAGCAGGAAGTGACCATAGTTTACCAAATTTAGCACTCAGGAGAGGTGAAGAGCATTCTTTTATTCTTAAACCAGCAACAACCCTGTGGAAGAATTTCAAGACTGGTGGTGATAGAAGCACTCAACAATCACTAGCACAGGCTGGAAATGCAGCATCAAGTTCACGTCTAGCATTGAAGACTGCTGAAGGAAAAAGGGCTGCTTCAACTGCTGACCAGTATGCAATTATGGTATCCTGTCGTTGCAACTACACGGAGTCAAGATTGTTTTTTAAACAGCCAACAAGTTGGCGACCGCGTATTTCAAGGGATCTTATGATATCTGTTGCGTCTGAAATGTCTGGACAATCTAGTGCACCAAATGCTGGAGTCTCCCAACTTCCTGTTCAGGTCTTAACTCTTCAGGCTTCAAACTTAACAACTGAAGATCTATCTCTGACGGTTCTTGCCCCGGCTTCATTTACTTCGCCACCTTCAGTCGTATCCTTGAATTCTTCACCTTCTTCTCCAATGAGTCCATTTGTTGGTTTTCCTGGGTTTACAGGAAGAACAACTGCCGAGAGACATTACTCTACAATGCAGAGGCTGAACTCAGCACCCTCTATATTGACAAATCAGAAACAAGCTTCTTCTAAAGAACAAGCTTCTCCAGTATCTGATGTTGTTCCTACTGCTGGTTTAGGTTGTACACATTTGTGGCTTCAGAGTAGAGTTCCACTAGGATGTGTTCCCTCCCAATCTACGGCCACCATCAAGCTGGAGCTACTTCCATTGACCGATGGCATAATTACGCTGGACACTCTTCAGATTGATGTCAAGGAAAAAGGTTGTACTTACATACCTGAGCACTCGCTGAAGATTAATGCCACTTCCAGTATTTCCTCGGGGATTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

849

Amino Acids

92.04

Weight (kDa)

5.71

Isoelectric Point (pI)

57.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17900 AT3G17900
fragaria_vesca	FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960
malus_domestica	MD13G1079000.v1.1 MD16G1078700.v1.1
prunus_persica	Prupe.1G267800_v2.0.a1 Prupe.1G267800_v2.0.a1
pyrus_communis	pycom13g06860 pycom16g06810
rosa_chinensis	RchiOBHm_Chr1g0331861 RchiOBHm_Chr1g0331881 RchiOBHm_Chr1g0353921 RchiOBHm_Chr4g0440641
rosa_laevigata	RLG00000006164 RLG00000029707
rosa_multiflora	Rmu_co8243009.1_g000001 Rmu_sc0001915.1_g000004 Rmu_sc0005552.1_g000001 Rmu_sc0007658.1_g000002 Rmu_sc0008018.1_g000005
rosa_roxburghii	Rroxscaffold_4G00301470 Rroxscaffold_5G00381450
rosa_rugosa	Rorug01G0239400 Rorug04G0327100
rosa_samantha	Rh1AG250900 Rh1BG221700 Rh1CG234700 Rh1DG248700 Rh4AG379000 Rh4BG391800 Rh4CG406300
rosa_wichuraiana	Rw1G021890 Rw4G032550 Rw4G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1261
Acc36I	ACCTGC	1 cut(s)	1261
AccB7I	CCANNNNNTGG	2 cut(s)	2018, 2177
AccBSI	CCGCTC	1 cut(s)	342
AccI	GTMKAC	1 cut(s)	1016
AccII	CGCG	2 cut(s)	1392, 1951
AccIII	TCCGGA	1 cut(s)	70
AciI	CCGC	4 cut(s)	340, 704, 1269, 1949
AclWI	GGATC	5 cut(s)	584, 645, 848, 1314, 1971
AcoI	YGGCCR	1 cut(s)	2397
AcsI	RAATTY	6 cut(s)	4, 847, 1482, 1681, 1747, 2143
AfaI	GTAC	7 cut(s)	33, 42, 550, 998, 1101, 2341, 2485
AfiI	CCNNNNNNNGG	6 cut(s)	297, 1181, 2018, 2177, 2327, 2395
AflIII	ACRYGT	3 cut(s)	28, 37, 786
AjiI	CACGTC	1 cut(s)	1820
AjnI	CCWGG	3 cut(s)	355, 1435, 2185
AjuI	GAANNNNNNNTTGG	2 cut(s)	2022, 2054
AleI	CACNNNNGTG	1 cut(s)	2347
Alw21I	GWGCWC	2 cut(s)	2011, 2502
Alw26I	GTCTC	7 cut(s)	687, 822, 868, 909, 1603, 2029, 2209
Alw44I	GTGCAC	1 cut(s)	2007
AlwI	GGATC	5 cut(s)	584, 645, 848, 1314, 1971
AlwNI	CAGNNNCTG	2 cut(s)	2239, 2309
Ama87I	CYCGRG	1 cut(s)	2536
Aor13HI	TCCGGA	1 cut(s)	70
AoxI	GGCC	1 cut(s)	2397
ApaLI	GTGCAC	1 cut(s)	2007
ApoI	RAATTY	6 cut(s)	4, 847, 1482, 1681, 1747, 2143
ArsI	GACNNNNNNTTYG	2 cut(s)	329, 361
AseI	ATTAAT	1 cut(s)	2514
Asp700I	GAANNNNTTC	3 cut(s)	366, 621, 1748
AspLEI	GCGC	3 cut(s)	79, 200, 1392
AspS9I	GGNCC	3 cut(s)	101, 337, 776
AsuC2I	CCSGG	1 cut(s)	2105
AsuHPI	GGTGA	7 cut(s)	371, 575, 725, 949, 1712, 1775, 2142
AsuII	TTCGAA	1 cut(s)	628
AvaI	CYCGRG	1 cut(s)	2536
AvaII	GGWCC	3 cut(s)	101, 337, 776
BaeGI	GKGCMC	1 cut(s)	2011
BbsI	GAAGAC	3 cut(s)	744, 1305, 1838
Bbv12I	GWGCWC	2 cut(s)	2011, 2502
BccI	CCATC	6 cut(s)	255, 763, 767, 1440, 2411, 2426
BceAI	ACGGC	2 cut(s)	38, 2412
BciT130I	CCWGG	3 cut(s)	357, 1437, 2187
BciVI	GTATCC	3 cut(s)	397, 1897, 2146
BclI	TGATCA	1 cut(s)	160
BcnI	CCSGG	1 cut(s)	2105
BcoDI	GTCTC	7 cut(s)	687, 822, 868, 909, 1603, 2029, 2209
BfaI	CTAG	6 cut(s)	21, 612, 1787, 1823, 2004, 2372
BfmI	CTRYAG	4 cut(s)	435, 1017, 1476, 1497
BfoI	RGCGCY	1 cut(s)	201
BfuAI	ACCTGC	1 cut(s)	1261
BfuI	GTATCC	3 cut(s)	397, 1897, 2146
BglII	AGATCT	1 cut(s)	2080
Bme1390I	CCNGG	4 cut(s)	357, 1437, 2105, 2187
Bme18I	GGWCC	3 cut(s)	101, 337, 776
BmeT110I	CYCGRG	1 cut(s)	2536
BmgBI	CACGTC	1 cut(s)	1820
BmgT120I	GGNCC	3 cut(s)	101, 337, 776
BmiI	GGNNCC	1 cut(s)	799
BmrFI	CCNGG	4 cut(s)	357, 1437, 2105, 2187
BmrI	ACTGGG	1 cut(s)	1312
BmsI	GCATC	4 cut(s)	244, 295, 1573, 1817
BmuI	ACTGGG	1 cut(s)	1312
BpiI	GAAGAC	3 cut(s)	744, 1305, 1838
BpmI	CTGGAG	6 cut(s)	131, 1095, 1533, 2040, 2286, 2432
Bpu10I	CCTNAGC	2 cut(s)	1026, 2496
Bpu14I	TTCGAA	1 cut(s)	628
BpuMI	CCSGG	1 cut(s)	2105
BsaBI	GATNNNNATC	1 cut(s)	135
BsaI	GGTCTC	1 cut(s)	687
BsaJI	CCNNGG	3 cut(s)	2103, 2186, 2535
BsaWI	WCCGGW	3 cut(s)	70, 310, 1181
BsaXI	ACNNNNNCTCC	2 cut(s)	906, 936
Bsc4I	CCNNNNNNNGG	6 cut(s)	297, 1181, 2018, 2177, 2327, 2395
Bse118I	RCCGGY	1 cut(s)	43
Bse1I	ACTGG	6 cut(s)	1272, 1307, 1762, 1870, 2303, 2526
Bse3DI	GCAATG	1 cut(s)	380
Bse8I	GATNNNNATC	1 cut(s)	135
BseAI	TCCGGA	1 cut(s)	70
BseBI	CCWGG	3 cut(s)	357, 1437, 2187
BseDI	CCNNGG	3 cut(s)	2103, 2186, 2535
BseGI	GGATG	6 cut(s)	256, 266, 607, 778, 1178, 2381
BseJI	GATNNNNATC	1 cut(s)	135
BseLI	CCNNNNNNNGG	6 cut(s)	297, 1181, 2018, 2177, 2327, 2395
BseMI	GCAATG	1 cut(s)	380
BseMII	CTCAG	7 cut(s)	756, 1040, 1202, 1593, 1705, 2259, 2487
BseNI	ACTGG	6 cut(s)	1272, 1307, 1762, 1870, 2303, 2526
BseRI	GAGGAG	4 cut(s)	1098, 1119, 1465, 1619
BseSI	GKGCMC	1 cut(s)	2011
BsgI	GTGCAG	1 cut(s)	1239
Bsh1236I	CGCG	2 cut(s)	1392, 1951
Bsh1285I	CGRYCG	1 cut(s)	1949
BshFI	GGCC	1 cut(s)	2399
BsiEI	CGRYCG	1 cut(s)	1949
BsiHKAI	GWGCWC	2 cut(s)	2011, 2502
BsiHKCI	CYCGRG	1 cut(s)	2536
BsiSI	CCGG	5 cut(s)	44, 71, 311, 1182, 2105
BslFI	GGGAC	1 cut(s)	703
BslI	CCNNNNNNNGG	6 cut(s)	297, 1181, 2018, 2177, 2327, 2395
BsmAI	GTCTC	7 cut(s)	687, 822, 868, 909, 1603, 2029, 2209
BsmBI	CGTCTC	1 cut(s)	868
BsmFI	GGGAC	1 cut(s)	703
BsmI	GAATGC	1 cut(s)	1708
BsnI	GGCC	1 cut(s)	2399
Bso31I	GGTCTC	1 cut(s)	687
BsoBI	CYCGRG	1 cut(s)	2536
Bsp119I	TTCGAA	1 cut(s)	628
Bsp1286I	GDGCHC	2 cut(s)	2011, 2502
Bsp13I	TCCGGA	1 cut(s)	70
Bsp1407I	TGTACA	2 cut(s)	31, 2339
Bsp143I	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
BspACI	CCGC	4 cut(s)	340, 704, 1269, 1949
BspANI	GGCC	1 cut(s)	2399
BspCNI	CTCAG	7 cut(s)	757, 1039, 1201, 1594, 1704, 2258, 2488
BspEI	TCCGGA	1 cut(s)	70
BspFNI	CGCG	2 cut(s)	1392, 1951
BspHI	TCATGA	1 cut(s)	238
BspLI	GGNNCC	1 cut(s)	799
BspMAI	CTGCAG	2 cut(s)	439, 1501
BspMI	ACCTGC	1 cut(s)	1261
BspPI	GGATC	5 cut(s)	584, 645, 848, 1314, 1971
BspQI	GCTCTTC	1 cut(s)	1698
BspT104I	TTCGAA	1 cut(s)	628
BspTNI	GGTCTC	1 cut(s)	687
BsrBI	CCGCTC	1 cut(s)	342
BsrDI	GCAATG	1 cut(s)	380
BsrFI	RCCGGY	1 cut(s)	43
BsrGI	TGTACA	2 cut(s)	31, 2339
BsrI	ACTGG	6 cut(s)	1272, 1307, 1762, 1870, 2303, 2526
BssAI	RCCGGY	1 cut(s)	43
BssECI	CCNNGG	3 cut(s)	2103, 2186, 2535
BssMI	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
Bst2UI	CCWGG	3 cut(s)	357, 1437, 2187
Bst4CI	ACNGT	3 cut(s)	144, 1626, 2095
Bst6I	CTCTTC	4 cut(s)	1328, 1698, 2058, 2460
BstAPI	GCANNNNNTGC	1 cut(s)	2015
BstAUI	TGTACA	2 cut(s)	31, 2339
BstBI	TTCGAA	1 cut(s)	628
BstDEI	CTNAG	9 cut(s)	744, 765, 1026, 1188, 1278, 1602, 1691, 2245, 2496
BstF5I	GGATG	6 cut(s)	256, 266, 607, 778, 1178, 2381
BstFNI	CGCG	2 cut(s)	1392, 1951
BstH2I	RGCGCY	1 cut(s)	201
BstHHI	GCGC	3 cut(s)	79, 200, 1392
BstKTI	GATC	9 cut(s)	163, 556, 592, 640, 856, 1294, 1309, 1966, 2083
BstMAI	GTCTC	7 cut(s)	687, 822, 868, 909, 1603, 2029, 2209
BstMBI	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
BstMCI	CGRYCG	1 cut(s)	1949
BstMWI	GCNNNNNNNGC	4 cut(s)	155, 1802, 1862, 2015
BstNI	CCWGG	3 cut(s)	357, 1437, 2187
BstNSI	RCATGY	4 cut(s)	32, 41, 396, 1559
BstSCI	CCNGG	4 cut(s)	355, 1435, 2103, 2185
BstSFI	CTRYAG	4 cut(s)	435, 1017, 1476, 1497
BstSLI	GKGCMC	1 cut(s)	2011
BstUI	CGCG	2 cut(s)	1392, 1951
BstV2I	GAAGAC	3 cut(s)	744, 1305, 1838
BstX2I	RGATCY	2 cut(s)	1963, 2080
BstXI	CCANNNNNNTGG	3 cut(s)	1570, 1941, 2410
BstYI	RGATCY	2 cut(s)	1963, 2080
BsuI	GTATCC	3 cut(s)	397, 1897, 2146
BsuRI	GGCC	1 cut(s)	2399
BtgZI	GCGATG	1 cut(s)	1209
BtrI	CACGTC	1 cut(s)	1820
BtsCI	GGATG	6 cut(s)	256, 266, 607, 778, 1178, 2381
BveI	ACCTGC	1 cut(s)	1261
CaiI	CAGNNNCTG	2 cut(s)	2239, 2309
CciI	TCATGA	1 cut(s)	238
CfoI	GCGC	3 cut(s)	79, 200, 1392
Cfr10I	RCCGGY	1 cut(s)	43
Cfr13I	GGNCC	3 cut(s)	101, 337, 776
CseI	GACGC	1 cut(s)	1971
Csp6I	GTAC	7 cut(s)	32, 41, 549, 997, 1100, 2340, 2484
CspCI	CAANNNNNGTGG	2 cut(s)	1741, 1776
CviAII	CATG	9 cut(s)	29, 38, 194, 239, 393, 1001, 1059, 1219, 1556
CviQI	GTAC	7 cut(s)	32, 41, 549, 997, 1100, 2340, 2484
DdeI	CTNAG	9 cut(s)	744, 765, 1026, 1188, 1278, 1602, 1691, 2245, 2496
DpnI	GATC	9 cut(s)	162, 555, 591, 639, 855, 1293, 1308, 1965, 2082
DpnII	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
DraI	TTTAAA	2 cut(s)	427, 1927
EaeI	YGGCCR	1 cut(s)	2397
Eam1104I	CTCTTC	4 cut(s)	1328, 1698, 2058, 2460
EarI	CTCTTC	4 cut(s)	1328, 1698, 2058, 2460
Eco31I	GGTCTC	1 cut(s)	687
Eco32I	GATATC	1 cut(s)	1974
Eco47I	GGWCC	3 cut(s)	101, 337, 776
Eco88I	CYCGRG	1 cut(s)	2536
EcoRI	GAATTC	1 cut(s)	2143
EcoRII	CCWGG	3 cut(s)	355, 1435, 2185
EcoRV	GATATC	1 cut(s)	1974
Esp3I	CGTCTC	1 cut(s)	868
FaeI	CATG	9 cut(s)	32, 41, 197, 242, 396, 1004, 1062, 1222, 1559
FalI	AAGNNNNNCTT	4 cut(s)	1271, 1303, 1840, 1872
FaqI	GGGAC	1 cut(s)	703
FatI	CATG	9 cut(s)	28, 37, 193, 238, 392, 1000, 1058, 1218, 1555
FbaI	TGATCA	1 cut(s)	160
FblI	GTMKAC	1 cut(s)	1016
FokI	GGATG	6 cut(s)	263, 273, 614, 785, 1165, 2388
FspBI	CTAG	6 cut(s)	21, 612, 1787, 1823, 2004, 2372
GlaI	GCGC	3 cut(s)	78, 199, 1391
GsuI	CTGGAG	6 cut(s)	131, 1095, 1533, 2040, 2286, 2432
HaeII	RGCGCY	1 cut(s)	201
HaeIII	GGCC	1 cut(s)	2399
HapII	CCGG	5 cut(s)	44, 71, 311, 1182, 2105
HgaI	GACGC	1 cut(s)	1971
HhaI	GCGC	3 cut(s)	79, 200, 1392
Hin1II	CATG	9 cut(s)	32, 41, 197, 242, 396, 1004, 1062, 1222, 1559
Hin6I	GCGC	3 cut(s)	77, 198, 1390
HinP1I	GCGC	3 cut(s)	77, 198, 1390
HincII	GTYRAC	1 cut(s)	26
HindII	GTYRAC	1 cut(s)	26
HindIII	AAGCTT	3 cut(s)	1285, 2277, 2295
HpaII	CCGG	5 cut(s)	44, 71, 311, 1182, 2105
HphI	GGTGA	7 cut(s)	371, 575, 725, 949, 1712, 1775, 2142
Hpy166II	GTNNAC	9 cut(s)	26, 362, 1017, 1622, 1676, 1817, 2009, 2193, 2342
Hpy8I	GTNNAC	9 cut(s)	26, 362, 1017, 1622, 1676, 1817, 2009, 2193, 2342
Hpy99I	CGWCG	1 cut(s)	1358
HpyAV	CCTTC	8 cut(s)	251, 577, 632, 1415, 1529, 1835, 2136, 2163
HpyCH4III	ACNGT	3 cut(s)	144, 1626, 2095
HpyCH4IV	ACGT	6 cut(s)	165, 243, 788, 861, 1098, 1819
HpyF10VI	GCNNNNNNNGC	4 cut(s)	155, 1802, 1862, 2015
HpyF3I	CTNAG	9 cut(s)	744, 765, 1026, 1188, 1278, 1602, 1691, 2245, 2496
HpySE526I	ACGT	6 cut(s)	165, 243, 788, 861, 1098, 1819
Hsp92II	CATG	9 cut(s)	32, 41, 197, 242, 396, 1004, 1062, 1222, 1559
HspAI	GCGC	3 cut(s)	77, 198, 1390
Kpn2I	TCCGGA	1 cut(s)	70
Ksp22I	TGATCA	1 cut(s)	160
Kzo9I	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
LguI	GCTCTTC	1 cut(s)	1698
LmnI	GCTCC	3 cut(s)	347, 1387, 2413
LweI	GCATC	4 cut(s)	244, 295, 1573, 1817
MaeI	CTAG	6 cut(s)	21, 612, 1787, 1823, 2004, 2372
MaeII	ACGT	6 cut(s)	165, 243, 788, 861, 1098, 1819
MaeIII	GTNAC	4 cut(s)	1211, 1349, 1635, 1664
MalI	GATC	9 cut(s)	162, 555, 591, 639, 855, 1293, 1308, 1965, 2082
MbiI	CCGCTC	1 cut(s)	342
MboI	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
MfeI	CAATTG	2 cut(s)	153, 1641
MflI	RGATCY	2 cut(s)	1963, 2080
MhlI	GDGCHC	2 cut(s)	2011, 2502
MlyI	GAGTC	7 cut(s)	209, 716, 725, 1345, 1919, 2031, 2176
MmeI	TCCRAC	2 cut(s)	148, 1071
MroI	TCCGGA	1 cut(s)	70
MroXI	GAANNNNTTC	3 cut(s)	366, 621, 1748
MslI	CAYNNNNRTG	2 cut(s)	2347, 2374
MspI	CCGG	5 cut(s)	44, 71, 311, 1182, 2105
MspR9I	CCNGG	4 cut(s)	357, 1437, 2105, 2187
MunI	CAATTG	2 cut(s)	153, 1641
Mva1269I	GAATGC	1 cut(s)	1708
MvaI	CCWGG	3 cut(s)	357, 1437, 2187
MvnI	CGCG	2 cut(s)	1392, 1951
MwoI	GCNNNNNNNGC	4 cut(s)	155, 1802, 1862, 2015
NciI	CCSGG	1 cut(s)	2105
NdeII	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
NlaIII	CATG	9 cut(s)	32, 41, 197, 242, 396, 1004, 1062, 1222, 1559
NlaIV	GGNNCC	1 cut(s)	799
NmeAIII	GCCGAG	1 cut(s)	2236
NmuCI	GTSAC	1 cut(s)	1664
NspI	RCATGY	4 cut(s)	32, 41, 396, 1559
NspV	TTCGAA	1 cut(s)	628
OliI	CACNNNNGTG	1 cut(s)	2347
PagI	TCATGA	1 cut(s)	238
PaqCI	CACCTGC	1 cut(s)	1261
PciI	ACATGT	2 cut(s)	28, 37
PciSI	GCTCTTC	1 cut(s)	1698
PctI	GAATGC	1 cut(s)	1708
PdmI	GAANNNNTTC	3 cut(s)	366, 621, 1748
PfeI	GAWTC	9 cut(s)	131, 179, 271, 617, 758, 979, 1145, 1425, 2542
PflMI	CCANNNNNTGG	2 cut(s)	2018, 2177
PleI	GAGTC	7 cut(s)	209, 715, 724, 1344, 1918, 2030, 2175
PpsI	GAGTC	7 cut(s)	209, 715, 724, 1344, 1918, 2030, 2175
PscI	ACATGT	2 cut(s)	28, 37
PshBI	ATTAAT	1 cut(s)	2514
Psp6I	CCWGG	3 cut(s)	355, 1435, 2185
PspGI	CCWGG	3 cut(s)	355, 1435, 2185
PspN4I	GGNNCC	1 cut(s)	799
PspPI	GGNCC	3 cut(s)	101, 337, 776
PstI	CTGCAG	2 cut(s)	439, 1501
PstNI	CAGNNNCTG	2 cut(s)	2239, 2309
PsuI	RGATCY	2 cut(s)	1963, 2080
RsaI	GTAC	7 cut(s)	33, 42, 550, 998, 1101, 2341, 2485
RsaNI	GTAC	7 cut(s)	32, 41, 549, 997, 1100, 2340, 2484
RseI	CAYNNNNRTG	2 cut(s)	2347, 2374
SapI	GCTCTTC	1 cut(s)	1698
Sau3AI	GATC	9 cut(s)	160, 553, 589, 637, 853, 1291, 1306, 1963, 2080
Sau96I	GGNCC	3 cut(s)	101, 337, 776
SchI	GAGTC	7 cut(s)	209, 716, 725, 1345, 1919, 2031, 2176
ScrFI	CCNGG	4 cut(s)	357, 1437, 2105, 2187
SduI	GDGCHC	2 cut(s)	2011, 2502
SfaNI	GCATC	4 cut(s)	244, 295, 1573, 1817
SfcI	CTRYAG	4 cut(s)	435, 1017, 1476, 1497
SfuI	TTCGAA	1 cut(s)	628
SinI	GGWCC	3 cut(s)	101, 337, 776
SmiMI	CAYNNNNRTG	2 cut(s)	2347, 2374
SsiI	CCGC	4 cut(s)	340, 704, 1269, 1949
SspI	AATATT	2 cut(s)	660, 1567
SspMI	CTAG	6 cut(s)	21, 612, 1787, 1823, 2004, 2372
StyD4I	CCNGG	4 cut(s)	355, 1435, 2103, 2185
TaaI	ACNGT	3 cut(s)	144, 1626, 2095
TaiI	ACGT	6 cut(s)	168, 246, 791, 864, 1101, 1822
TaqI	TCGA	2 cut(s)	628, 1372
TaqII	GACCGA	1 cut(s)	2444
TatI	WGTACW	3 cut(s)	31, 2339, 2483
TauI	GCSGC	1 cut(s)	1271
TfiI	GAWTC	9 cut(s)	131, 179, 271, 617, 758, 979, 1145, 1425, 2542
TseFI	GTSAC	1 cut(s)	1664
Tsp45I	GTSAC	1 cut(s)	1664
TspGWI	ACGGA	2 cut(s)	1077, 1922
Van91I	CCANNNNNTGG	2 cut(s)	2018, 2177
VneI	GTGCAC	1 cut(s)	2007
VpaK11BI	GGWCC	3 cut(s)	101, 337, 776
VspI	ATTAAT	1 cut(s)	2514
XapI	RAATTY	6 cut(s)	4, 847, 1482, 1681, 1747, 2143
XceI	RCATGY	4 cut(s)	32, 41, 396, 1559
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1443, 2407
XmiI	GTMKAC	1 cut(s)	1016
XmnI	GAANNNNTTC	3 cut(s)	366, 621, 1748
XspI	CTAG	6 cut(s)	21, 612, 1787, 1823, 2004, 2372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.