Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001915.1

Orthogroup ID

OG0003049

Physical Location & Seq

Genomic Coordinates Forward (+)

53122 .. 61486

Gene Structure 8365 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001915.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2850 bp

atgtcatcaaacattgttgtgtgcttagctttgctgattgaagaagataaatgggaaaatgagctctccttcagcttcacaaggtattctaactggcaagtctattgcttccttctgtttcaagctgttaggaatccatatcgtaggaatcaatcagggaatccatatcgtagaaagaggcgagacgaaagaaagggaggagagaacggggaagaaagaagagaaggagaagagacagaccgaaagctattgacaacacaagtggaaggcgctttttgttttggcgggacgatgaatttatttagaatatctagtcaacatgtacaacatgtaccggctgctgctgttgtttatgaaccacctccggaggcgcagcttcccctgaaaccagcaggaccaactttggagggtttaattgctgaagattcatatccacagtatgctgcaattgctgatcacgttggagaaaatgaatccggagttgaacatggcactggtgcaaagaacgactcatctgttatagcaaagcatcatgacgtttcggatgaggaaggatggattgcgattccatacaaagaactccccgataattggaatgatgcaccagagatacaatcattacgctctatggaccgctcctttgtttttcctggtgaacatgttcatatccttgccttgctgtcagcatgtaagcaggatacagaaattattactccttttaaattagctgcagctatgaataaaaatggtttaaagcaaagcccaacgaagcaaaatgggaacgtggaagatgaaaatgatacattgtcaagaaaaggagaaagtagtcttgatagtcaaggtcaaggtacagatcaaattggtgaaaccctgtcaaaagagaaggctgatccacaaaaggatgtttctgctagtgaatcccttcttcgaatggaggatcacaaaagacaaactgaaatattattgcaaagatttgagaggtctcatttttttgttaggattgcggagtcaggtgagtccctttggtcaaaaaagggttcttctaagaagtcttcagaatcttctgagatggatggtctagaggacacgttaaatggaacccagaaaagtgcattgtctcaactcaatgccattgttgataaaggaaattttgatcccaaagtctctggtggtgtagcaagaaataatgtcaagtgttgctctctttctaatggagacatggtggttcttttacaggtgaatgttggtgtagattttttgaatgaccctgttattgagattcttcagtttgagaagtaccgtgagagaagtctgtctacagaggctcaggagaacttggtttatgcaaatccggacccatgtggagagttgttaaaatggctgcttcctttggataacgtacttcctcctccagctcgtcctttatctcctcctttaacttctaattcaggaattggtggcacacatcaaaagcccacatccggttctcagattttatcccattttagaagttactccatgtcatcactaccacaaaatactacacaaccacctgcacctattacagccgccagttctaagccaagctttgatcgtgaagactgggatcagttttcatctctgaagctcttgaagagtcaaaaagctggttacgacgggcttttatcttttcgaggtgtgtcattggagcgcgaaaggttttctgttcgttgtggattggaaggcatctatacaccaggaagaagatggaggagaaaacttgaaatcatacaacctgtagaaattcattcttttgctgcggactgcaatacagatgaccttctctgtgtccagataaagaatgtttctccagcacatgcacccaatattgtggtgtatgtagatgctataacgattgtctttgaggaggcttcaaaaggtggacagtctgtatcgttaccaattgtatgtgtggaagcaggaagtgaccatagtttaccaaatttagcactcaggagaggtgaagagcattcttttattcttaaaccagcaacagccctgtggaagaatttcaagactggtggtgatagaagcactcaacaatcactagcacaggctggaaatgcagcatctagttcacatctagcattgaagactgctgaaggaaaaagggctgcttcaaccgctgaccagtatgcaattatggtatcctgtcggtgcaactacacggagtcaagattgttttttaaacagccaacaagttggcgaccgcgtatgtcaagggatcttatgatatctgttgcgtctgaaatgtctggacaatctagtgcaccaaatgctggagtctcccaacttcctgttcaggtcttaactcttcaggcttcaaacttaacaactgaagatctatctctgacggttcttgccccggcttcatttactttgccaccttcagtcgtatccttgaattcttcaccttcttctccaatgagtccatttgttggttttcctgggtttacaggaagaacaaccgccgagagacataactctacaatgcagaggctgaactcagcaccctctatattgacaaatcagaaacaagcttcttctaaagaacaagcttctccagtatctgatattgttcctactgctggtttaggttgtacacatttgtggcttcagagtagagttccactaggatgtgttccctcccaatctacggccaccatcaagcttgagctacttccattgactgatggcataattacgctggacactcttcagatcgatgtcaaggaaaaaggtcgtacttacatacctgagcactcgctgaagattaatgccacatccagtatttcctcggggattctttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

949

Amino Acids

103.91

Weight (kDa)

5.94

Isoelectric Point (pI)

55.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17900 AT3G17900
fragaria_vesca	FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960
malus_domestica	MD13G1079000.v1.1 MD16G1078700.v1.1
prunus_persica	Prupe.1G267800_v2.0.a1 Prupe.1G267800_v2.0.a1
pyrus_communis	pycom13g06860 pycom16g06810
rosa_chinensis	RchiOBHm_Chr1g0331861 RchiOBHm_Chr1g0331881 RchiOBHm_Chr1g0353921 RchiOBHm_Chr4g0440641
rosa_laevigata	RLG00000006164 RLG00000029707
rosa_multiflora	Rmu_co8243009.1_g000001 Rmu_sc0001915.1_g000004 Rmu_sc0005552.1_g000001 Rmu_sc0007658.1_g000002 Rmu_sc0008018.1_g000005
rosa_roxburghii	Rroxscaffold_4G00301470 Rroxscaffold_5G00381450
rosa_rugosa	Rorug01G0239400 Rorug04G0327100
rosa_samantha	Rh1AG250900 Rh1BG221700 Rh1CG234700 Rh1DG248700 Rh4AG379000 Rh4BG391800 Rh4CG406300
rosa_wichuraiana	Rw1G021890 Rw4G032550 Rw4G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1561
Acc36I	ACCTGC	1 cut(s)	1561
AccB7I	CCANNNNNTGG	2 cut(s)	2318, 2477
AccBSI	CCGCTC	1 cut(s)	636
AccI	GTMKAC	1 cut(s)	1316
AccII	CGCG	2 cut(s)	1692, 2251
AccIII	TCCGGA	3 cut(s)	364, 476, 1351
AciI	CCGC	8 cut(s)	285, 634, 1004, 1569, 1799, 2163, 2249, 2508
AclWI	GGATC	5 cut(s)	884, 945, 1148, 1614, 2271
AcoI	YGGCCR	1 cut(s)	2697
AcsI	RAATTY	6 cut(s)	295, 1147, 1782, 1981, 2047, 2443
AfaI	GTAC	7 cut(s)	324, 333, 850, 1298, 1401, 2641, 2785
AfiI	CCNNNNNNNGG	6 cut(s)	591, 1481, 2318, 2477, 2627, 2695
AflIII	ACRYGT	4 cut(s)	319, 328, 658, 1086
AjnI	CCWGG	3 cut(s)	649, 1735, 2485
AjuI	GAANNNNNNNTTGG	2 cut(s)	2322, 2354
AleI	CACNNNNGTG	1 cut(s)	2647
Alw21I	GWGCWC	3 cut(s)	66, 2311, 2802
Alw26I	GTCTC	8 cut(s)	177, 227, 987, 1122, 1168, 1209, 2329, 2509
Alw44I	GTGCAC	1 cut(s)	2307
AlwI	GGATC	5 cut(s)	884, 945, 1148, 1614, 2271
AlwNI	CAGNNNCTG	2 cut(s)	2539, 2609
Ama87I	CYCGRG	1 cut(s)	2836
Aor13HI	TCCGGA	3 cut(s)	364, 476, 1351
AoxI	GGCC	1 cut(s)	2697
ApaLI	GTGCAC	1 cut(s)	2307
ApoI	RAATTY	6 cut(s)	295, 1147, 1782, 1981, 2047, 2443
ArsI	GACNNNNNNTTYG	2 cut(s)	623, 655
AseI	ATTAAT	1 cut(s)	2814
Asp700I	GAANNNNTTC	3 cut(s)	660, 921, 2048
AspLEI	GCGC	3 cut(s)	272, 373, 1692
AspS9I	GGNCC	3 cut(s)	395, 631, 1354
AsuC2I	CCSGG	1 cut(s)	2405
AsuHPI	GGTGA	7 cut(s)	665, 875, 1025, 1249, 2012, 2075, 2442
AsuII	TTCGAA	1 cut(s)	928
AvaI	CYCGRG	1 cut(s)	2836
AvaII	GGWCC	3 cut(s)	395, 631, 1354
BaeGI	GKGCMC	1 cut(s)	2311
BanII	GRGCYC	1 cut(s)	66
BarI	GAAGNNNNNNTAC	2 cut(s)	1300, 1332
BbsI	GAAGAC	3 cut(s)	1044, 1605, 2138
Bbv12I	GWGCWC	3 cut(s)	66, 2311, 2802
BccI	CCATC	6 cut(s)	549, 1063, 1067, 1740, 2711, 2726
BceAI	ACGGC	1 cut(s)	2712
BciT130I	CCWGG	3 cut(s)	651, 1737, 2487
BciVI	GTATCC	3 cut(s)	691, 2197, 2446
BclI	TGATCA	1 cut(s)	454
BcnI	CCSGG	1 cut(s)	2405
BcoDI	GTCTC	8 cut(s)	177, 227, 987, 1122, 1168, 1209, 2329, 2509
BfaI	CTAG	8 cut(s)	312, 912, 1079, 2087, 2112, 2123, 2304, 2672
BfmI	CTRYAG	3 cut(s)	729, 1317, 1776
BfoI	RGCGCY	1 cut(s)	273
BfuAI	ACCTGC	1 cut(s)	1561
BfuI	GTATCC	3 cut(s)	691, 2197, 2446
BglII	AGATCT	1 cut(s)	2380
BlpI	GCTNAGC	1 cut(s)	25
Bme1390I	CCNGG	4 cut(s)	651, 1737, 2405, 2487
Bme18I	GGWCC	3 cut(s)	395, 631, 1354
BmeT110I	CYCGRG	1 cut(s)	2836
BmgT120I	GGNCC	3 cut(s)	395, 631, 1354
BmiI	GGNNCC	2 cut(s)	1099, 1356
BmrFI	CCNGG	4 cut(s)	651, 1737, 2405, 2487
BmrI	ACTGGG	1 cut(s)	1612
BmsI	GCATC	5 cut(s)	538, 589, 1734, 1873, 2117
BmuI	ACTGGG	1 cut(s)	1612
BpiI	GAAGAC	3 cut(s)	1044, 1605, 2138
BpmI	CTGGAG	4 cut(s)	1395, 1833, 2340, 2586
Bpu10I	CCTNAGC	2 cut(s)	1326, 2796
Bpu1102I	GCTNAGC	1 cut(s)	25
Bpu14I	TTCGAA	1 cut(s)	928
BpuEI	CTTGAG	1 cut(s)	2732
BpuMI	CCSGG	1 cut(s)	2405
Bsa29I	ATCGAT	1 cut(s)	2763
BsaBI	GATNNNNATC	1 cut(s)	429
BsaI	GGTCTC	1 cut(s)	987
BsaJI	CCNNGG	3 cut(s)	2403, 2486, 2835
BsaWI	WCCGGW	4 cut(s)	364, 476, 1351, 1481
BsaXI	ACNNNNNCTCC	2 cut(s)	1206, 1236
Bsc4I	CCNNNNNNNGG	6 cut(s)	591, 1481, 2318, 2477, 2627, 2695
Bse118I	RCCGGY	1 cut(s)	334
Bse1I	ACTGG	8 cut(s)	98, 499, 1572, 1607, 2062, 2170, 2603, 2826
Bse8I	GATNNNNATC	1 cut(s)	429
BseAI	TCCGGA	3 cut(s)	364, 476, 1351
BseBI	CCWGG	3 cut(s)	651, 1737, 2487
BseCI	ATCGAT	1 cut(s)	2763
BseDI	CCNNGG	3 cut(s)	2403, 2486, 2835
BseGI	GGATG	7 cut(s)	550, 560, 907, 1078, 1478, 2681, 2822
BseJI	GATNNNNATC	1 cut(s)	429
BseLI	CCNNNNNNNGG	6 cut(s)	591, 1481, 2318, 2477, 2627, 2695
BseMII	CTCAG	6 cut(s)	1056, 1340, 1502, 2005, 2559, 2787
BseNI	ACTGG	8 cut(s)	98, 499, 1572, 1607, 2062, 2170, 2603, 2826
BseRI	GAGGAG	5 cut(s)	213, 1398, 1419, 1765, 1919
BseSI	GKGCMC	1 cut(s)	2311
BsgI	GTGCAG	1 cut(s)	1539
Bsh1236I	CGCG	2 cut(s)	1692, 2251
Bsh1285I	CGRYCG	1 cut(s)	2249
BshFI	GGCC	1 cut(s)	2699
BshVI	ATCGAT	1 cut(s)	2763
BsiEI	CGRYCG	1 cut(s)	2249
BsiHKAI	GWGCWC	3 cut(s)	66, 2311, 2802
BsiHKCI	CYCGRG	1 cut(s)	2836
BsiSI	CCGG	6 cut(s)	335, 365, 477, 1352, 1482, 2405
BslFI	GGGAC	2 cut(s)	301, 1003
BslI	CCNNNNNNNGG	6 cut(s)	591, 1481, 2318, 2477, 2627, 2695
BsmAI	GTCTC	8 cut(s)	177, 227, 987, 1122, 1168, 1209, 2329, 2509
BsmBI	CGTCTC	1 cut(s)	177
BsmFI	GGGAC	2 cut(s)	301, 1003
BsmI	GAATGC	1 cut(s)	2008
BsnI	GGCC	1 cut(s)	2699
Bso31I	GGTCTC	1 cut(s)	987
BsoBI	CYCGRG	1 cut(s)	2836
Bsp119I	TTCGAA	1 cut(s)	928
Bsp1286I	GDGCHC	3 cut(s)	66, 2311, 2802
Bsp13I	TCCGGA	3 cut(s)	364, 476, 1351
Bsp1407I	TGTACA	2 cut(s)	322, 2639
Bsp1720I	GCTNAGC	1 cut(s)	25
BspACI	CCGC	8 cut(s)	285, 634, 1004, 1569, 1799, 2163, 2249, 2508
BspANI	GGCC	1 cut(s)	2699
BspCNI	CTCAG	6 cut(s)	1057, 1339, 1501, 2004, 2558, 2788
BspDI	ATCGAT	1 cut(s)	2763
BspEI	TCCGGA	3 cut(s)	364, 476, 1351
BspFNI	CGCG	2 cut(s)	1692, 2251
BspHI	TCATGA	1 cut(s)	532
BspLI	GGNNCC	2 cut(s)	1099, 1356
BspMAI	CTGCAG	1 cut(s)	733
BspMI	ACCTGC	1 cut(s)	1561
BspPI	GGATC	5 cut(s)	884, 945, 1148, 1614, 2271
BspQI	GCTCTTC	1 cut(s)	1998
BspT104I	TTCGAA	1 cut(s)	928
BspTNI	GGTCTC	1 cut(s)	987
BsrBI	CCGCTC	1 cut(s)	636
BsrFI	RCCGGY	1 cut(s)	334
BsrGI	TGTACA	2 cut(s)	322, 2639
BsrI	ACTGG	8 cut(s)	98, 499, 1572, 1607, 2062, 2170, 2603, 2826
BssAI	RCCGGY	1 cut(s)	334
BssECI	CCNNGG	3 cut(s)	2403, 2486, 2835
Bst2UI	CCWGG	3 cut(s)	651, 1737, 2487
Bst4CI	ACNGT	4 cut(s)	438, 1301, 1926, 2395
Bst6I	CTCTTC	6 cut(s)	214, 225, 1628, 1998, 2358, 2760
BstAPI	GCANNNNNTGC	1 cut(s)	2315
BstAUI	TGTACA	2 cut(s)	322, 2639
BstBI	TTCGAA	1 cut(s)	928
BstDEI	CTNAG	9 cut(s)	25, 1044, 1065, 1326, 1488, 1578, 1991, 2545, 2796
BstF5I	GGATG	7 cut(s)	550, 560, 907, 1078, 1478, 2681, 2822
BstFNI	CGCG	2 cut(s)	1692, 2251
BstH2I	RGCGCY	1 cut(s)	273
BstHHI	GCGC	3 cut(s)	272, 373, 1692
BstMAI	GTCTC	8 cut(s)	177, 227, 987, 1122, 1168, 1209, 2329, 2509
BstMCI	CGRYCG	1 cut(s)	2249
BstMWI	GCNNNNNNNGC	4 cut(s)	449, 2102, 2162, 2315
BstNI	CCWGG	3 cut(s)	651, 1737, 2487
BstNSI	RCATGY	5 cut(s)	323, 332, 662, 690, 1859
BstSCI	CCNGG	4 cut(s)	649, 1735, 2403, 2485
BstSFI	CTRYAG	3 cut(s)	729, 1317, 1776
BstSLI	GKGCMC	1 cut(s)	2311
BstUI	CGCG	2 cut(s)	1692, 2251
BstV2I	GAAGAC	3 cut(s)	1044, 1605, 2138
BstX2I	RGATCY	2 cut(s)	2263, 2380
BstXI	CCANNNNNNTGG	2 cut(s)	1870, 2241
BstYI	RGATCY	2 cut(s)	2263, 2380
Bsu15I	ATCGAT	1 cut(s)	2763
BsuI	GTATCC	3 cut(s)	691, 2197, 2446
BsuRI	GGCC	1 cut(s)	2699
BsuTUI	ATCGAT	1 cut(s)	2763
BtsCI	GGATG	7 cut(s)	550, 560, 907, 1078, 1478, 2681, 2822
BtsIMutI	CAGTG	1 cut(s)	492
BveI	ACCTGC	1 cut(s)	1561
CaiI	CAGNNNCTG	2 cut(s)	2539, 2609
CciI	TCATGA	1 cut(s)	532
CfoI	GCGC	3 cut(s)	272, 373, 1692
Cfr10I	RCCGGY	1 cut(s)	334
Cfr13I	GGNCC	3 cut(s)	395, 631, 1354
ClaI	ATCGAT	1 cut(s)	2763
CseI	GACGC	1 cut(s)	2271
Csp6I	GTAC	7 cut(s)	323, 332, 849, 1297, 1400, 2640, 2784
CspCI	CAANNNNNGTGG	4 cut(s)	243, 278, 2041, 2076
CviQI	GTAC	7 cut(s)	323, 332, 849, 1297, 1400, 2640, 2784
DdeI	CTNAG	9 cut(s)	25, 1044, 1065, 1326, 1488, 1578, 1991, 2545, 2796
DraI	TTTAAA	3 cut(s)	721, 753, 2227
EaeI	YGGCCR	1 cut(s)	2697
Eam1104I	CTCTTC	6 cut(s)	214, 225, 1628, 1998, 2358, 2760
EarI	CTCTTC	6 cut(s)	214, 225, 1628, 1998, 2358, 2760
Ecl136II	GAGCTC	1 cut(s)	64
Eco24I	GRGCYC	1 cut(s)	66
Eco31I	GGTCTC	1 cut(s)	987
Eco32I	GATATC	1 cut(s)	2274
Eco47I	GGWCC	3 cut(s)	395, 631, 1354
Eco53kI	GAGCTC	1 cut(s)	64
Eco88I	CYCGRG	1 cut(s)	2836
EcoICRI	GAGCTC	1 cut(s)	64
EcoRI	GAATTC	1 cut(s)	2443
EcoRII	CCWGG	3 cut(s)	649, 1735, 2485
EcoRV	GATATC	1 cut(s)	2274
EcoT38I	GRGCYC	1 cut(s)	66
Esp3I	CGTCTC	1 cut(s)	177
FalI	AAGNNNNNCTT	4 cut(s)	1571, 1603, 2140, 2172
FaqI	GGGAC	2 cut(s)	301, 1003
FauI	CCCGC	1 cut(s)	278
FbaI	TGATCA	1 cut(s)	454
FblI	GTMKAC	1 cut(s)	1316
FokI	GGATG	7 cut(s)	557, 567, 914, 1085, 1465, 2688, 2809
FriOI	GRGCYC	1 cut(s)	66
FspBI	CTAG	8 cut(s)	312, 912, 1079, 2087, 2112, 2123, 2304, 2672
GlaI	GCGC	3 cut(s)	271, 372, 1691
GsuI	CTGGAG	4 cut(s)	1395, 1833, 2340, 2586
HaeII	RGCGCY	1 cut(s)	273
HaeIII	GGCC	1 cut(s)	2699
HapII	CCGG	6 cut(s)	335, 365, 477, 1352, 1482, 2405
HgaI	GACGC	1 cut(s)	2271
HhaI	GCGC	3 cut(s)	272, 373, 1692
Hin6I	GCGC	3 cut(s)	270, 371, 1690
HinP1I	GCGC	3 cut(s)	270, 371, 1690
HincII	GTYRAC	1 cut(s)	317
HindII	GTYRAC	1 cut(s)	317
HindIII	AAGCTT	4 cut(s)	1585, 2577, 2595, 2708
HpaII	CCGG	6 cut(s)	335, 365, 477, 1352, 1482, 2405
HphI	GGTGA	7 cut(s)	665, 875, 1025, 1249, 2012, 2075, 2442
Hpy166II	GTNNAC	9 cut(s)	317, 656, 1317, 1922, 1976, 2117, 2309, 2493, 2642
Hpy8I	GTNNAC	9 cut(s)	317, 656, 1317, 1922, 1976, 2117, 2309, 2493, 2642
Hpy99I	CGWCG	1 cut(s)	1658
HpyCH4III	ACNGT	4 cut(s)	438, 1301, 1926, 2395
HpyCH4IV	ACGT	5 cut(s)	459, 537, 783, 1088, 1398
HpyF10VI	GCNNNNNNNGC	4 cut(s)	449, 2102, 2162, 2315
HpyF3I	CTNAG	9 cut(s)	25, 1044, 1065, 1326, 1488, 1578, 1991, 2545, 2796
HpySE526I	ACGT	5 cut(s)	459, 537, 783, 1088, 1398
HspAI	GCGC	3 cut(s)	270, 371, 1690
Kpn2I	TCCGGA	3 cut(s)	364, 476, 1351
Ksp22I	TGATCA	1 cut(s)	454
LguI	GCTCTTC	1 cut(s)	1998
LmnI	GCTCC	2 cut(s)	641, 1687
LweI	GCATC	5 cut(s)	538, 589, 1734, 1873, 2117
MaeI	CTAG	8 cut(s)	312, 912, 1079, 2087, 2112, 2123, 2304, 2672
MaeII	ACGT	5 cut(s)	459, 537, 783, 1088, 1398
MaeIII	GTNAC	4 cut(s)	1511, 1649, 1935, 1964
MbiI	CCGCTC	1 cut(s)	636
MfeI	CAATTG	2 cut(s)	447, 1941
MflI	RGATCY	2 cut(s)	2263, 2380
MhlI	GDGCHC	3 cut(s)	66, 2311, 2802
MlyI	GAGTC	7 cut(s)	503, 1016, 1025, 1645, 2219, 2331, 2476
MmeI	TCCRAC	1 cut(s)	442
MroI	TCCGGA	3 cut(s)	364, 476, 1351
MroXI	GAANNNNTTC	3 cut(s)	660, 921, 2048
MslI	CAYNNNNRTG	3 cut(s)	17, 2647, 2674
MspA1I	CMGCKG	1 cut(s)	2165
MspI	CCGG	6 cut(s)	335, 365, 477, 1352, 1482, 2405
MspR9I	CCNGG	4 cut(s)	651, 1737, 2405, 2487
MunI	CAATTG	2 cut(s)	447, 1941
Mva1269I	GAATGC	1 cut(s)	2008
MvaI	CCWGG	3 cut(s)	651, 1737, 2487
MvnI	CGCG	2 cut(s)	1692, 2251
MwoI	GCNNNNNNNGC	4 cut(s)	449, 2102, 2162, 2315
NciI	CCSGG	1 cut(s)	2405
NlaIV	GGNNCC	2 cut(s)	1099, 1356
NmeAIII	GCCGAG	1 cut(s)	2536
NmuCI	GTSAC	1 cut(s)	1964
NspI	RCATGY	5 cut(s)	323, 332, 662, 690, 1859
NspV	TTCGAA	1 cut(s)	928
OliI	CACNNNNGTG	1 cut(s)	2647
PagI	TCATGA	1 cut(s)	532
PaqCI	CACCTGC	1 cut(s)	1561
PciI	ACATGT	3 cut(s)	319, 328, 658
PciSI	GCTCTTC	1 cut(s)	1998
PctI	GAATGC	1 cut(s)	2008
PdmI	GAANNNNTTC	3 cut(s)	660, 921, 2048
PflMI	CCANNNNNTGG	2 cut(s)	2318, 2477
PleI	GAGTC	7 cut(s)	503, 1015, 1024, 1644, 2218, 2330, 2475
PpsI	GAGTC	7 cut(s)	503, 1015, 1024, 1644, 2218, 2330, 2475
PscI	ACATGT	3 cut(s)	319, 328, 658
PshBI	ATTAAT	1 cut(s)	2814
Psp124BI	GAGCTC	1 cut(s)	66
Psp6I	CCWGG	3 cut(s)	649, 1735, 2485
PspGI	CCWGG	3 cut(s)	649, 1735, 2485
PspN4I	GGNNCC	2 cut(s)	1099, 1356
PspPI	GGNCC	3 cut(s)	395, 631, 1354
PstI	CTGCAG	1 cut(s)	733
PstNI	CAGNNNCTG	2 cut(s)	2539, 2609
PsuI	RGATCY	2 cut(s)	2263, 2380
RsaI	GTAC	7 cut(s)	324, 333, 850, 1298, 1401, 2641, 2785
RsaNI	GTAC	7 cut(s)	323, 332, 849, 1297, 1400, 2640, 2784
RseI	CAYNNNNRTG	3 cut(s)	17, 2647, 2674
SacI	GAGCTC	1 cut(s)	66
SapI	GCTCTTC	1 cut(s)	1998
Sau96I	GGNCC	3 cut(s)	395, 631, 1354
SchI	GAGTC	7 cut(s)	503, 1016, 1025, 1645, 2219, 2331, 2476
ScrFI	CCNGG	4 cut(s)	651, 1737, 2405, 2487
SduI	GDGCHC	3 cut(s)	66, 2311, 2802
SfaNI	GCATC	5 cut(s)	538, 589, 1734, 1873, 2117
SfcI	CTRYAG	3 cut(s)	729, 1317, 1776
SfuI	TTCGAA	1 cut(s)	928
SinI	GGWCC	3 cut(s)	395, 631, 1354
SmiMI	CAYNNNNRTG	3 cut(s)	17, 2647, 2674
SmlI	CTYRAG	1 cut(s)	2711
SmoI	CTYRAG	1 cut(s)	2711
SsiI	CCGC	8 cut(s)	285, 634, 1004, 1569, 1799, 2163, 2249, 2508
SspI	AATATT	2 cut(s)	960, 1867
SspMI	CTAG	8 cut(s)	312, 912, 1079, 2087, 2112, 2123, 2304, 2672
SstI	GAGCTC	1 cut(s)	66
StyD4I	CCNGG	4 cut(s)	649, 1735, 2403, 2485
TaaI	ACNGT	4 cut(s)	438, 1301, 1926, 2395
TaiI	ACGT	5 cut(s)	462, 540, 786, 1091, 1401
TaqI	TCGA	3 cut(s)	928, 1672, 2763
TaqII	GACCGA	1 cut(s)	255
TatI	WGTACW	2 cut(s)	322, 2639
TauI	GCSGC	1 cut(s)	1571
TscAI	CASTG	1 cut(s)	499
TseFI	GTSAC	1 cut(s)	1964
Tsp45I	GTSAC	1 cut(s)	1964
TspGWI	ACGGA	1 cut(s)	2222
TspRI	CASTG	1 cut(s)	499
Van91I	CCANNNNNTGG	2 cut(s)	2318, 2477
VneI	GTGCAC	1 cut(s)	2307
VpaK11BI	GGWCC	3 cut(s)	395, 631, 1354
VspI	ATTAAT	1 cut(s)	2814
XapI	RAATTY	6 cut(s)	295, 1147, 1782, 1981, 2047, 2443
XbaI	TCTAGA	1 cut(s)	1078
XceI	RCATGY	5 cut(s)	323, 332, 662, 690, 1859
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1743
XmiI	GTMKAC	1 cut(s)	1316
XmnI	GAANNNNTTC	3 cut(s)	660, 921, 2048
XspI	CTAG	8 cut(s)	312, 912, 1079, 2087, 2112, 2123, 2304, 2672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.