Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0003049

Physical Location & Seq

Genomic Coordinates Reverse (-)

34123915 .. 34127662

Gene Structure 3748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG221700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGAATAAAAATGGCTTAAAGCAAAGCCCAACGAAGCAAAATGGGAATTTGGAAAATGAAAATGATACATTGTCAAGAAAAGGAGAAAGTAGTCCTGATAGTCAAGGTACAGATCAAAATGGTGAAACCCTGTCAAAAGAGAAGGCTGATCCACAAAAGGATGTTTCTGCTAGTGAATCCCTTCTTCGAATGGAGGATCACAAAAGACAAACTGAAATATTATTGCAAAGATTTGAGAGGTCTCATTTTTTTGTTAGGATTGCGGAGTCAGGTGAGTCCCTTTGGTCAAAAAAGGGTTCTTCTAAGAAGTCTTCAGAATCTTCTGAGATGGATGGTCCAGAGGACACGTTAAATGGAACCCAGAAAAGTGCATTGTCTCAACTCAATGCCATTGTTGATAAAGGAAATTTTGATCCCAACGTCTCTGGTGGTGTAGCAAGAAATAATGTCAAGTGTTGCTCTCTTTCTAATGGAGACATAGTGGTTCTTTTACAGGTGAATGTTGGTGTAGATTTTTTGAATGACCCTGTTATTGAGATTCTTCAGTTTGAGAAGTACAGTGAGAGAAGTTTGTCTACAGAGGCTCAGGAGAACTTGGTTTATGCAAATCCGGACCCTTGTGGAGAGTTGTTAAAATGGCTGCTTCCTTTGGATAACGTACTTCCTCCTCCAGCTCGTCCTTTATCTCCTCCTTTAACTTCCAATTCAGGAATTGATGGCACACCTCAAAAGCCCACATCCGGTTCTCAGATTTTCTCCCATTTTAGAAGTTACTCCATGTCATCACTACCACAAAATACTACACAACCACCTGCACCTATTAAAGCCGCCAGTTCTAAGTCAAGCTTTGATCTTGAAGACTGGGATCAGTTTTCATCTCTGAAGCTCTTGAAGAGTCAAAAAGCTGGTTACGACGGGCTTTTATCTTTTCGAGGTGTGTCATTGGAGCGCGAAAGGTTTTCTGTTCGTTGTGGATTGGAAGGCATCTATACACCAGGAAGAAGATGGAGGAGAAAACTTGAAATCATACAACCTGTAGAAATTCATTCTTTTGCTGCGGACTGCAATACAGATGACCTTCTCTGTGTCCAGATAAAGAATGTTTCTCCAGCACATGCACCCAATATTGTGGTGTATGTAGATGCTATAACGATTGTCTCTGAGGAGGCTTCAAAAGGTGGACAGTCTGTATCGTTACCAATTGTATGTGTGGAAGCAGGAAGTGACCATAGTATACCAAATTTAGCACTCAGGAGAGGTGAAGAGCATTCTTTTATTCTTAAACCAGCAACAACCCTGTGGAAGAATTTCAAGACTGGTGGTGATAGAAGCACTCAACAATCACTAGCACAGGCTGGAAATGCCGCATCAAGTTCACGTCTAGCATTGAAGACTGCTGAAGGAAAAAGGGCTGCTTCAACTGCTGACCAGTATGCAATTATGGTATCCTGTCGGTGCAACTACACGGAGTCAAGATTGTTTTTTAAACAGCCAACAAGTTGGCGACCGCGTATTTCAAGGGATCTTATGATATCTGTTGCGTCTGAAATGTCTGGACAATCTAGTGCACCAAATGCTGGAGTCTCCCAACTTCCTGTTCAGGTCTTAACTCTTCAGGCTTCAAACTTAACAACTGAAGATCTATCTCTGACGGTTCTTGCCCCGGCTTCATTTACTTCGCCACCTTCAGTCGTATCCTTGAATTCTTCACCTTCTTCTCCAATGAGTCCATTTGTTGGTTTTCCTGGGTTTACAGGAAGAACTGCCGAGAGACATAACTCTACAATGCAGAGGCTGAACTCAGCACCCTCTATATTGACAAATGAGAAACAAGCTTCTTCTAAAGAACAAGCTTCTCCAGTATCTGATGTTGTTCCTACTGCTGGTTTAGGTTGTACGCATTTGTGGCTTCAGAGTAGAGTTCCACTAGGATGTGTTCCCTCCCAATCTACGGCCACCATCAAGCTTGAGCTACTTCCATTGACCGATGGCATAATTACACTGGACACTCTTCAGATTGATGTCAAGGAAAAAGGTCGTACTTACATACCTGAGCACTCGCTGAAGATTAATGCCACTTCCAGTATTTCCTCGGGGAGAGACTGTATTCTTTGTAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

706

Amino Acids

76.54

Weight (kDa)

6.59

Isoelectric Point (pI)

55.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17900 AT3G17900
fragaria_vesca	FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960 FvH4_4g31960
malus_domestica	MD13G1079000.v1.1 MD16G1078700.v1.1
prunus_persica	Prupe.1G267800_v2.0.a1 Prupe.1G267800_v2.0.a1
pyrus_communis	pycom13g06860 pycom16g06810
rosa_chinensis	RchiOBHm_Chr1g0331861 RchiOBHm_Chr1g0331881 RchiOBHm_Chr1g0353921 RchiOBHm_Chr4g0440641
rosa_laevigata	RLG00000006164 RLG00000029707
rosa_multiflora	Rmu_co8243009.1_g000001 Rmu_sc0001915.1_g000004 Rmu_sc0005552.1_g000001 Rmu_sc0007658.1_g000002 Rmu_sc0008018.1_g000005
rosa_roxburghii	Rroxscaffold_4G00301470 Rroxscaffold_5G00381450
rosa_rugosa	Rorug01G0239400 Rorug04G0327100
rosa_samantha	Rh1AG250900 Rh1BG221700 Rh1CG234700 Rh1DG248700 Rh4AG379000 Rh4BG391800 Rh4CG406300
rosa_wichuraiana	Rw1G021890 Rw4G032550 Rw4G032590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	820
Acc36I	ACCTGC	1 cut(s)	820
AccB7I	CCANNNNNTGG	2 cut(s)	1577, 1736
AccI	GTMKAC	2 cut(s)	575, 1234
AccII	CGCG	2 cut(s)	951, 1510
AccIII	TCCGGA	1 cut(s)	610
AciI	CCGC	5 cut(s)	263, 828, 1058, 1365, 1508
AclWI	GGATC	5 cut(s)	143, 204, 407, 873, 1530
AcoI	YGGCCR	1 cut(s)	1953
AcsI	RAATTY	6 cut(s)	46, 406, 1041, 1240, 1306, 1702
AfaI	GTAC	5 cut(s)	109, 557, 660, 1897, 2041
AfiI	CCNNNNNNNGG	5 cut(s)	740, 1577, 1736, 1883, 1951
AflIII	ACRYGT	1 cut(s)	345
AjiI	CACGTC	1 cut(s)	1379
AjnI	CCWGG	2 cut(s)	994, 1744
AjuI	GAANNNNNNNTTGG	2 cut(s)	1581, 1613
AluBI	AGCT	8 cut(s)	674, 846, 886, 905, 1835, 1853, 1966, 1972
AluI	AGCT	8 cut(s)	674, 846, 886, 905, 1835, 1853, 1966, 1972
Alw21I	GWGCWC	2 cut(s)	1570, 2058
Alw26I	GTCTC	8 cut(s)	246, 381, 427, 468, 1162, 1588, 1765, 2094
Alw44I	GTGCAC	1 cut(s)	1566
AlwI	GGATC	5 cut(s)	143, 204, 407, 873, 1530
AlwNI	CAGNNNCTG	2 cut(s)	1795, 1865
Ama87I	CYCGRG	1 cut(s)	2092
Aor13HI	TCCGGA	1 cut(s)	610
AoxI	GGCC	1 cut(s)	1953
ApaLI	GTGCAC	1 cut(s)	1566
ApeKI	GCWGC	3 cut(s)	640, 1055, 1412
ApoI	RAATTY	6 cut(s)	46, 406, 1041, 1240, 1306, 1702
AseI	ATTAAT	1 cut(s)	2070
Asp700I	GAANNNNTTC	2 cut(s)	180, 1307
AspLEI	GCGC	1 cut(s)	951
AspS9I	GGNCC	2 cut(s)	335, 613
AsuC2I	CCSGG	1 cut(s)	1664
AsuHPI	GGTGA	6 cut(s)	134, 284, 508, 1271, 1334, 1701
AsuII	TTCGAA	1 cut(s)	187
AvaI	CYCGRG	1 cut(s)	2092
AvaII	GGWCC	2 cut(s)	335, 613
BaeGI	GKGCMC	1 cut(s)	1570
BarI	GAAGNNNNNNTAC	2 cut(s)	559, 591
BbsI	GAAGAC	3 cut(s)	303, 864, 1397
Bbv12I	GWGCWC	2 cut(s)	1570, 2058
BbvI	GCAGC	3 cut(s)	627, 1042, 1399
BccI	CCATC	6 cut(s)	322, 326, 710, 999, 1967, 1982
BceAI	ACGGC	1 cut(s)	1968
BciT130I	CCWGG	2 cut(s)	996, 1746
BciVI	GTATCC	2 cut(s)	1456, 1705
BcnI	CCSGG	1 cut(s)	1664
BcoDI	GTCTC	8 cut(s)	246, 381, 427, 468, 1162, 1588, 1765, 2094
BfaI	CTAG	5 cut(s)	171, 1346, 1382, 1563, 1928
BfmI	CTRYAG	2 cut(s)	576, 1035
BfuAI	ACCTGC	1 cut(s)	820
BfuI	GTATCC	2 cut(s)	1456, 1705
BglII	AGATCT	1 cut(s)	1639
BisI	GCNGC	5 cut(s)	641, 828, 1056, 1365, 1413
BlsI	GCNGC	5 cut(s)	642, 829, 1057, 1366, 1414
Bme1390I	CCNGG	3 cut(s)	996, 1664, 1746
Bme18I	GGWCC	2 cut(s)	335, 613
BmeT110I	CYCGRG	1 cut(s)	2092
BmgBI	CACGTC	1 cut(s)	1379
BmgT120I	GGNCC	2 cut(s)	335, 613
BmiI	GGNNCC	2 cut(s)	358, 615
BmrFI	CCNGG	3 cut(s)	996, 1664, 1746
BmrI	ACTGGG	1 cut(s)	871
BmsI	GCATC	3 cut(s)	993, 1132, 1376
BmuI	ACTGGG	1 cut(s)	871
BpiI	GAAGAC	3 cut(s)	303, 864, 1397
BpmI	CTGGAG	4 cut(s)	654, 1092, 1599, 1842
Bpu10I	CCTNAGC	2 cut(s)	585, 2052
Bpu14I	TTCGAA	1 cut(s)	187
BpuEI	CTTGAG	1 cut(s)	1988
BpuMI	CCSGG	1 cut(s)	1664
BsaI	GGTCTC	1 cut(s)	246
BsaJI	CCNNGG	3 cut(s)	1662, 1745, 2091
BsaWI	WCCGGW	2 cut(s)	610, 740
BsaXI	ACNNNNNCTCC	4 cut(s)	465, 495, 2089, 2119
Bsc4I	CCNNNNNNNGG	5 cut(s)	740, 1577, 1736, 1883, 1951
Bse1I	ACTGG	7 cut(s)	831, 866, 1321, 1429, 1859, 2007, 2082
BseAI	TCCGGA	1 cut(s)	610
BseBI	CCWGG	2 cut(s)	996, 1746
BseDI	CCNNGG	3 cut(s)	1662, 1745, 2091
BseGI	GGATG	4 cut(s)	166, 337, 737, 1937
BseLI	CCNNNNNNNGG	5 cut(s)	740, 1577, 1736, 1883, 1951
BseMII	CTCAG	7 cut(s)	315, 599, 761, 1152, 1264, 1815, 2043
BseNI	ACTGG	7 cut(s)	831, 866, 1321, 1429, 1859, 2007, 2082
BseRI	GAGGAG	4 cut(s)	657, 678, 1024, 1178
BseSI	GKGCMC	1 cut(s)	1570
BseXI	GCAGC	3 cut(s)	627, 1042, 1399
BsgI	GTGCAG	1 cut(s)	798
Bsh1236I	CGCG	2 cut(s)	951, 1510
Bsh1285I	CGRYCG	1 cut(s)	1508
BshFI	GGCC	1 cut(s)	1955
BsiEI	CGRYCG	1 cut(s)	1508
BsiHKAI	GWGCWC	2 cut(s)	1570, 2058
BsiHKCI	CYCGRG	1 cut(s)	2092
BsiSI	CCGG	3 cut(s)	611, 741, 1664
BslFI	GGGAC	1 cut(s)	262
BslI	CCNNNNNNNGG	5 cut(s)	740, 1577, 1736, 1883, 1951
BsmAI	GTCTC	8 cut(s)	246, 381, 427, 468, 1162, 1588, 1765, 2094
BsmBI	CGTCTC	1 cut(s)	427
BsmFI	GGGAC	1 cut(s)	262
BsmI	GAATGC	1 cut(s)	1267
BsnI	GGCC	1 cut(s)	1955
Bso31I	GGTCTC	1 cut(s)	246
BsoBI	CYCGRG	1 cut(s)	2092
Bsp119I	TTCGAA	1 cut(s)	187
Bsp1286I	GDGCHC	2 cut(s)	1570, 2058
Bsp13I	TCCGGA	1 cut(s)	610
Bsp143I	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
BspACI	CCGC	5 cut(s)	263, 828, 1058, 1365, 1508
BspANI	GGCC	1 cut(s)	1955
BspCNI	CTCAG	7 cut(s)	316, 598, 760, 1153, 1263, 1814, 2044
BspEI	TCCGGA	1 cut(s)	610
BspFNI	CGCG	2 cut(s)	951, 1510
BspLI	GGNNCC	2 cut(s)	358, 615
BspMI	ACCTGC	1 cut(s)	820
BspPI	GGATC	5 cut(s)	143, 204, 407, 873, 1530
BspQI	GCTCTTC	1 cut(s)	1257
BspT104I	TTCGAA	1 cut(s)	187
BspTNI	GGTCTC	1 cut(s)	246
BsrI	ACTGG	7 cut(s)	831, 866, 1321, 1429, 1859, 2007, 2082
BssECI	CCNNGG	3 cut(s)	1662, 1745, 2091
BssMI	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
BssNAI	GTATAC	1 cut(s)	1235
Bst1107I	GTATAC	1 cut(s)	1235
Bst2UI	CCWGG	2 cut(s)	996, 1746
Bst4CI	ACNGT	4 cut(s)	560, 1185, 1654, 2105
Bst6I	CTCTTC	4 cut(s)	887, 1257, 1617, 2016
BstAPI	GCANNNNNTGC	1 cut(s)	1574
BstBI	TTCGAA	1 cut(s)	187
BstDEI	CTNAG	9 cut(s)	303, 324, 585, 747, 837, 1161, 1250, 1801, 2052
BstF5I	GGATG	4 cut(s)	166, 337, 737, 1937
BstFNI	CGCG	2 cut(s)	951, 1510
BstHHI	GCGC	1 cut(s)	951
BstKTI	GATC	8 cut(s)	115, 151, 199, 415, 853, 868, 1525, 1642
BstMAI	GTCTC	8 cut(s)	246, 381, 427, 468, 1162, 1588, 1765, 2094
BstMBI	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
BstMCI	CGRYCG	1 cut(s)	1508
BstMWI	GCNNNNNNNGC	4 cut(s)	1361, 1421, 1574, 1906
BstNI	CCWGG	2 cut(s)	996, 1746
BstNSI	RCATGY	1 cut(s)	1118
BstSCI	CCNGG	3 cut(s)	994, 1662, 1744
BstSFI	CTRYAG	2 cut(s)	576, 1035
BstSLI	GKGCMC	1 cut(s)	1570
BstUI	CGCG	2 cut(s)	951, 1510
BstV1I	GCAGC	3 cut(s)	627, 1042, 1399
BstV2I	GAAGAC	3 cut(s)	303, 864, 1397
BstX2I	RGATCY	2 cut(s)	1522, 1639
BstXI	CCANNNNNNTGG	2 cut(s)	1129, 1500
BstYI	RGATCY	2 cut(s)	1522, 1639
BstZ17I	GTATAC	1 cut(s)	1235
BsuI	GTATCC	2 cut(s)	1456, 1705
BsuRI	GGCC	1 cut(s)	1955
BtrI	CACGTC	1 cut(s)	1379
BtsCI	GGATG	4 cut(s)	166, 337, 737, 1937
BtsIMutI	CAGTG	2 cut(s)	565, 2000
BveI	ACCTGC	1 cut(s)	820
CaiI	CAGNNNCTG	2 cut(s)	1795, 1865
CfoI	GCGC	1 cut(s)	951
Cfr13I	GGNCC	2 cut(s)	335, 613
CseI	GACGC	1 cut(s)	1530
Csp6I	GTAC	5 cut(s)	108, 556, 659, 1896, 2040
CspCI	CAANNNNNGTGG	2 cut(s)	1300, 1335
CviAII	CATG	2 cut(s)	778, 1115
CviQI	GTAC	5 cut(s)	108, 556, 659, 1896, 2040
DdeI	CTNAG	9 cut(s)	303, 324, 585, 747, 837, 1161, 1250, 1801, 2052
DpnI	GATC	8 cut(s)	114, 150, 198, 414, 852, 867, 1524, 1641
DpnII	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
DraI	TTTAAA	1 cut(s)	1486
EaeI	YGGCCR	1 cut(s)	1953
Eam1104I	CTCTTC	4 cut(s)	887, 1257, 1617, 2016
EarI	CTCTTC	4 cut(s)	887, 1257, 1617, 2016
Eco31I	GGTCTC	1 cut(s)	246
Eco32I	GATATC	1 cut(s)	1533
Eco47I	GGWCC	2 cut(s)	335, 613
Eco88I	CYCGRG	1 cut(s)	2092
EcoRI	GAATTC	1 cut(s)	1702
EcoRII	CCWGG	2 cut(s)	994, 1744
EcoRV	GATATC	1 cut(s)	1533
Esp3I	CGTCTC	1 cut(s)	427
FaeI	CATG	2 cut(s)	781, 1118
FalI	AAGNNNNNCTT	4 cut(s)	830, 862, 1399, 1431
FaqI	GGGAC	1 cut(s)	262
FatI	CATG	2 cut(s)	777, 1114
FblI	GTMKAC	2 cut(s)	575, 1234
Fnu4HI	GCNGC	5 cut(s)	641, 828, 1056, 1365, 1413
FokI	GGATG	4 cut(s)	173, 344, 724, 1944
Fsp4HI	GCNGC	5 cut(s)	641, 828, 1056, 1365, 1413
FspBI	CTAG	5 cut(s)	171, 1346, 1382, 1563, 1928
GlaI	GCGC	1 cut(s)	950
GluI	GCNGC	5 cut(s)	641, 828, 1056, 1365, 1413
GsuI	CTGGAG	4 cut(s)	654, 1092, 1599, 1842
HaeIII	GGCC	1 cut(s)	1955
HapII	CCGG	3 cut(s)	611, 741, 1664
HgaI	GACGC	1 cut(s)	1530
HhaI	GCGC	1 cut(s)	951
Hin1II	CATG	2 cut(s)	781, 1118
Hin6I	GCGC	1 cut(s)	949
HinP1I	GCGC	1 cut(s)	949
HindIII	AAGCTT	4 cut(s)	844, 1833, 1851, 1964
HinfI	GANTC	9 cut(s)	176, 266, 275, 317, 538, 895, 1469, 1581, 1726
HpaII	CCGG	3 cut(s)	611, 741, 1664
HphI	GGTGA	6 cut(s)	134, 284, 508, 1271, 1334, 1701
Hpy166II	GTNNAC	6 cut(s)	576, 1181, 1235, 1376, 1568, 1752
Hpy8I	GTNNAC	6 cut(s)	576, 1181, 1235, 1376, 1568, 1752
Hpy99I	CGWCG	1 cut(s)	917
HpyAV	CCTTC	7 cut(s)	136, 191, 974, 1088, 1394, 1695, 1722
HpyCH4III	ACNGT	4 cut(s)	560, 1185, 1654, 2105
HpyCH4IV	ACGT	4 cut(s)	347, 420, 657, 1378
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1361, 1421, 1574, 1906
HpyF3I	CTNAG	9 cut(s)	303, 324, 585, 747, 837, 1161, 1250, 1801, 2052
HpySE526I	ACGT	4 cut(s)	347, 420, 657, 1378
Hsp92II	CATG	2 cut(s)	781, 1118
HspAI	GCGC	1 cut(s)	949
Kpn2I	TCCGGA	1 cut(s)	610
Kzo9I	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
LguI	GCTCTTC	1 cut(s)	1257
LmnI	GCTCC	1 cut(s)	946
Lsp1109I	GCAGC	3 cut(s)	627, 1042, 1399
LweI	GCATC	3 cut(s)	993, 1132, 1376
MaeI	CTAG	5 cut(s)	171, 1346, 1382, 1563, 1928
MaeII	ACGT	4 cut(s)	347, 420, 657, 1378
MaeIII	GTNAC	4 cut(s)	770, 908, 1194, 1223
MalI	GATC	8 cut(s)	114, 150, 198, 414, 852, 867, 1524, 1641
MboI	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
MfeI	CAATTG	1 cut(s)	1200
MflI	RGATCY	2 cut(s)	1522, 1639
MhlI	GDGCHC	2 cut(s)	1570, 2058
MlyI	GAGTC	6 cut(s)	275, 284, 904, 1478, 1590, 1735
MroI	TCCGGA	1 cut(s)	610
MroXI	GAANNNNTTC	2 cut(s)	180, 1307
MslI	CAYNNNNRTG	1 cut(s)	1930
MspI	CCGG	3 cut(s)	611, 741, 1664
MspR9I	CCNGG	3 cut(s)	996, 1664, 1746
MunI	CAATTG	1 cut(s)	1200
Mva1269I	GAATGC	1 cut(s)	1267
MvaI	CCWGG	2 cut(s)	996, 1746
MvnI	CGCG	2 cut(s)	951, 1510
MwoI	GCNNNNNNNGC	4 cut(s)	1361, 1421, 1574, 1906
NciI	CCSGG	1 cut(s)	1664
NdeII	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
NlaIII	CATG	2 cut(s)	781, 1118
NlaIV	GGNNCC	2 cut(s)	358, 615
NmeAIII	GCCGAG	1 cut(s)	1792
NmuCI	GTSAC	1 cut(s)	1223
NspI	RCATGY	1 cut(s)	1118
NspV	TTCGAA	1 cut(s)	187
PaqCI	CACCTGC	1 cut(s)	820
PciSI	GCTCTTC	1 cut(s)	1257
PctI	GAATGC	1 cut(s)	1267
PdmI	GAANNNNTTC	2 cut(s)	180, 1307
PfeI	GAWTC	3 cut(s)	176, 317, 538
PflMI	CCANNNNNTGG	2 cut(s)	1577, 1736
PkrI	GCNGC	5 cut(s)	642, 829, 1057, 1366, 1414
PleI	GAGTC	6 cut(s)	274, 283, 903, 1477, 1589, 1734
PpsI	GAGTC	6 cut(s)	274, 283, 903, 1477, 1589, 1734
PshBI	ATTAAT	1 cut(s)	2070
Psp6I	CCWGG	2 cut(s)	994, 1744
PspGI	CCWGG	2 cut(s)	994, 1744
PspN4I	GGNNCC	2 cut(s)	358, 615
PspPI	GGNCC	2 cut(s)	335, 613
PstNI	CAGNNNCTG	2 cut(s)	1795, 1865
PsuI	RGATCY	2 cut(s)	1522, 1639
RsaI	GTAC	5 cut(s)	109, 557, 660, 1897, 2041
RsaNI	GTAC	5 cut(s)	108, 556, 659, 1896, 2040
RseI	CAYNNNNRTG	1 cut(s)	1930
SapI	GCTCTTC	1 cut(s)	1257
SatI	GCNGC	5 cut(s)	641, 828, 1056, 1365, 1413
Sau3AI	GATC	8 cut(s)	112, 148, 196, 412, 850, 865, 1522, 1639
Sau96I	GGNCC	2 cut(s)	335, 613
SchI	GAGTC	6 cut(s)	275, 284, 904, 1478, 1590, 1735
ScrFI	CCNGG	3 cut(s)	996, 1664, 1746
SduI	GDGCHC	2 cut(s)	1570, 2058
SfaNI	GCATC	3 cut(s)	993, 1132, 1376
SfcI	CTRYAG	2 cut(s)	576, 1035
SfuI	TTCGAA	1 cut(s)	187
SinI	GGWCC	2 cut(s)	335, 613
SmiMI	CAYNNNNRTG	1 cut(s)	1930
SmlI	CTYRAG	1 cut(s)	1967
SmoI	CTYRAG	1 cut(s)	1967
SsiI	CCGC	5 cut(s)	263, 828, 1058, 1365, 1508
SspI	AATATT	2 cut(s)	219, 1126
SspMI	CTAG	5 cut(s)	171, 1346, 1382, 1563, 1928
StyD4I	CCNGG	3 cut(s)	994, 1662, 1744
TaaI	ACNGT	4 cut(s)	560, 1185, 1654, 2105
TaiI	ACGT	4 cut(s)	350, 423, 660, 1381
TaqI	TCGA	2 cut(s)	187, 931
TaqII	GACCGA	1 cut(s)	2000
TatI	WGTACW	1 cut(s)	555
TauI	GCSGC	2 cut(s)	830, 1367
TfiI	GAWTC	3 cut(s)	176, 317, 538
TscAI	CASTG	2 cut(s)	565, 2007
TseFI	GTSAC	1 cut(s)	1223
TseI	GCWGC	3 cut(s)	640, 1055, 1412
Tsp45I	GTSAC	1 cut(s)	1223
TspDTI	ATGAA	5 cut(s)	17, 72, 864, 1034, 1659
TspGWI	ACGGA	1 cut(s)	1481
TspRI	CASTG	2 cut(s)	565, 2007
Van91I	CCANNNNNTGG	2 cut(s)	1577, 1736
VneI	GTGCAC	1 cut(s)	1566
VpaK11BI	GGWCC	2 cut(s)	335, 613
VspI	ATTAAT	1 cut(s)	2070
XapI	RAATTY	6 cut(s)	46, 406, 1041, 1240, 1306, 1702
XceI	RCATGY	1 cut(s)	1118
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1002
XmiI	GTMKAC	2 cut(s)	575, 1234
XmnI	GAANNNNTTC	2 cut(s)	180, 1307
XspI	CTAG	5 cut(s)	171, 1346, 1382, 1563, 1928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.