Cyclic dof factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G39660 AT5G39660 AT5G39660 |
| fragaria_vesca | FvH4_4g31210 FvH4_6g48270 FvH4_6g48270 |
| malus_domestica | MD00G1125100.v1.1 MD13G1070600.v1.1 MD16G1071400.v1.1 |
| prunus_persica | Prupe.1G276000_v2.0.a1 Prupe.3G266200_v2.0.a1 |
| pyrus_communis | pycom111g04390 pycom13g06340 pycom16g06180 pycom17g04800 |
| rosa_chinensis | RchiOBHm_Chr2g0167771 RchiOBHm_Chr4g0439611 |
| rosa_laevigata | RLG00000006255 RLG00000021752 |
| rosa_multiflora | Rmu_sc0002549.1_g000020 |
| rosa_roxburghii | Rroxscaffold_2G00083270 Rroxscaffold_5G00380530 |
| rosa_rugosa | Rorug02G0532000 Rorug04G0320000 |
| rosa_samantha | Rh2AG600900 Rh2BG611600 Rh2CG581800 Rh2DG624000 Rh4AG371200 Rh4BG382900 Rh4CG397500 Rh4DG377700 |
| rosa_wichuraiana | Rw2G049900 Rw4G031640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 513 |
| AccB1I | GGYRCC | 1 cut(s) | 64 |
| AccII | CGCG | 1 cut(s) | 1289 |
| AciI | CCGC | 1 cut(s) | 90 |
| AclWI | GGATC | 2 cut(s) | 910, 1340 |
| AcsI | RAATTY | 3 cut(s) | 922, 1150, 1213 |
| AcuI | CTGAAG | 3 cut(s) | 177, 618, 1287 |
| AcvI | CACGTG | 1 cut(s) | 1471 |
| AcyI | GRCGYC | 1 cut(s) | 65 |
| AfaI | GTAC | 5 cut(s) | 736, 820, 999, 1137, 1414 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 418, 1124, 1226, 1518 |
| AflIII | ACRYGT | 1 cut(s) | 654 |
| AgsI | TTSAA | 7 cut(s) | 158, 215, 793, 921, 1239, 1445, 1478 |
| AjnI | CCWGG | 3 cut(s) | 871, 1009, 1434 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 837, 869 |
| AleI | CACNNNNGTG | 1 cut(s) | 897 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 485, 517 |
| Alw21I | GWGCWC | 2 cut(s) | 709, 1370 |
| Alw26I | GTCTC | 5 cut(s) | 402, 1166, 1433, 1449, 1488 |
| Alw44I | GTGCAC | 1 cut(s) | 705 |
| AlwI | GGATC | 2 cut(s) | 910, 1340 |
| AoxI | GGCC | 5 cut(s) | 19, 420, 839, 1022, 1049 |
| ApaLI | GTGCAC | 1 cut(s) | 705 |
| ApeKI | GCWGC | 5 cut(s) | 131, 695, 1128, 1358, 1508 |
| ApoI | RAATTY | 3 cut(s) | 922, 1150, 1213 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 37, 69, 736, 768 |
| AspLEI | GCGC | 1 cut(s) | 67 |
| AspS9I | GGNCC | 3 cut(s) | 20, 1050, 1208 |
| AsuC2I | CCSGG | 1 cut(s) | 1519 |
| AsuHPI | GGTGA | 1 cut(s) | 1161 |
| AvaII | GGWCC | 1 cut(s) | 1208 |
| AxyI | CCTNAGG | 1 cut(s) | 1225 |
| BaeGI | GKGCMC | 1 cut(s) | 709 |
| BanI | GGYRCC | 1 cut(s) | 64 |
| BanII | GRGCYC | 1 cut(s) | 1370 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 718, 750 |
| BauI | CACGAG | 1 cut(s) | 684 |
| BbrPI | CACGTG | 1 cut(s) | 1471 |
| BbsI | GAAGAC | 1 cut(s) | 315 |
| Bbv12I | GWGCWC | 2 cut(s) | 709, 1370 |
| BbvI | GCAGC | 5 cut(s) | 118, 682, 1115, 1370, 1520 |
| BccI | CCATC | 3 cut(s) | 370, 1180, 1301 |
| BceAI | ACGGC | 1 cut(s) | 98 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 665, 699 |
| BciT130I | CCWGG | 3 cut(s) | 873, 1011, 1436 |
| BcnI | CCSGG | 1 cut(s) | 1519 |
| BcoDI | GTCTC | 5 cut(s) | 402, 1166, 1433, 1449, 1488 |
| BfaI | CTAG | 1 cut(s) | 690 |
| BfmI | CTRYAG | 1 cut(s) | 1506 |
| BfoI | RGCGCY | 1 cut(s) | 68 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1086 |
| BisI | GCNGC | 5 cut(s) | 132, 696, 1129, 1359, 1509 |
| BlsI | GCNGC | 5 cut(s) | 133, 697, 1130, 1360, 1510 |
| Bme1390I | CCNGG | 4 cut(s) | 873, 1011, 1436, 1519 |
| Bme18I | GGWCC | 1 cut(s) | 1208 |
| BmgT120I | GGNCC | 3 cut(s) | 20, 1050, 1208 |
| BmiI | GGNNCC | 5 cut(s) | 22, 66, 112, 833, 1015 |
| BmrFI | CCNGG | 4 cut(s) | 873, 1011, 1436, 1519 |
| BmsI | GCATC | 2 cut(s) | 658, 877 |
| BpiI | GAAGAC | 1 cut(s) | 315 |
| BpmI | CTGGAG | 2 cut(s) | 597, 1470 |
| BpuEI | CTTGAG | 2 cut(s) | 880, 978 |
| BpuMI | CCSGG | 1 cut(s) | 1519 |
| BsaAI | YACGTR | 1 cut(s) | 1471 |
| BsaHI | GRCGYC | 1 cut(s) | 65 |
| BsaI | GGTCTC | 2 cut(s) | 402, 1433 |
| BsaJI | CCNNGG | 2 cut(s) | 1019, 1031 |
| BsaWI | WCCGGW | 1 cut(s) | 1138 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 930, 960 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 418, 1124, 1226, 1518 |
| Bse1I | ACTGG | 3 cut(s) | 423, 572, 1487 |
| Bse21I | CCTNAGG | 1 cut(s) | 1225 |
| Bse3DI | GCAATG | 1 cut(s) | 736 |
| BseBI | CCWGG | 3 cut(s) | 873, 1011, 1436 |
| BseDI | CCNNGG | 2 cut(s) | 1019, 1031 |
| BseGI | GGATG | 3 cut(s) | 892, 1172, 1316 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 418, 1124, 1226, 1518 |
| BseMI | GCAATG | 1 cut(s) | 736 |
| BseMII | CTCAG | 3 cut(s) | 261, 1053, 1058 |
| BseNI | ACTGG | 3 cut(s) | 423, 572, 1487 |
| BseRI | GAGGAG | 3 cut(s) | 753, 981, 1156 |
| BseSI | GKGCMC | 1 cut(s) | 709 |
| BseXI | GCAGC | 5 cut(s) | 118, 682, 1115, 1370, 1520 |
| BsgI | GTGCAG | 2 cut(s) | 1095, 1114 |
| Bsh1236I | CGCG | 1 cut(s) | 1289 |
| BshFI | GGCC | 5 cut(s) | 21, 422, 841, 1024, 1051 |
| BshNI | GGYRCC | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 2 cut(s) | 709, 1370 |
| BsiSI | CCGG | 2 cut(s) | 1139, 1519 |
| BslFI | GGGAC | 1 cut(s) | 1501 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 418, 1124, 1226, 1518 |
| BsmAI | GTCTC | 5 cut(s) | 402, 1166, 1433, 1449, 1488 |
| BsmBI | CGTCTC | 2 cut(s) | 1449, 1488 |
| BsmFI | GGGAC | 1 cut(s) | 1501 |
| BsmI | GAATGC | 1 cut(s) | 1065 |
| BsnI | GGCC | 5 cut(s) | 21, 422, 841, 1024, 1051 |
| Bso31I | GGTCTC | 2 cut(s) | 402, 1433 |
| Bsp1286I | GDGCHC | 2 cut(s) | 709, 1370 |
| Bsp143I | GATC | 3 cut(s) | 902, 1282, 1345 |
| Bsp19I | CCATGG | 1 cut(s) | 1031 |
| BspACI | CCGC | 1 cut(s) | 90 |
| BspANI | GGCC | 5 cut(s) | 21, 422, 841, 1024, 1051 |
| BspCNI | CTCAG | 3 cut(s) | 262, 1052, 1057 |
| BspFNI | CGCG | 1 cut(s) | 1289 |
| BspHI | TCATGA | 1 cut(s) | 585 |
| BspLI | GGNNCC | 5 cut(s) | 22, 66, 112, 833, 1015 |
| BspMAI | CTGCAG | 1 cut(s) | 1510 |
| BspPI | GGATC | 2 cut(s) | 910, 1340 |
| BspT107I | GGYRCC | 1 cut(s) | 64 |
| BspTNI | GGTCTC | 2 cut(s) | 402, 1433 |
| BsrDI | GCAATG | 1 cut(s) | 736 |
| BsrI | ACTGG | 3 cut(s) | 423, 572, 1487 |
| BssECI | CCNNGG | 2 cut(s) | 1019, 1031 |
| BssMI | GATC | 3 cut(s) | 902, 1282, 1345 |
| BssNI | GRCGYC | 1 cut(s) | 65 |
| BssSI | CACGAG | 1 cut(s) | 684 |
| BssT1I | CCWWGG | 2 cut(s) | 1019, 1031 |
| Bst2BI | CACGAG | 1 cut(s) | 684 |
| Bst2UI | CCWGG | 3 cut(s) | 873, 1011, 1436 |
| Bst4CI | ACNGT | 5 cut(s) | 164, 557, 739, 1135, 1193 |
| Bst6I | CTCTTC | 2 cut(s) | 637, 1436 |
| BstACI | GRCGYC | 1 cut(s) | 65 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 704 |
| BstBAI | YACGTR | 1 cut(s) | 1471 |
| BstC8I | GCNNGC | 4 cut(s) | 807, 963, 1267, 1497 |
| BstDEI | CTNAG | 5 cut(s) | 270, 1039, 1044, 1184, 1225 |
| BstDSI | CCRYGG | 1 cut(s) | 1031 |
| BstF5I | GGATG | 3 cut(s) | 892, 1172, 1316 |
| BstFNI | CGCG | 1 cut(s) | 1289 |
| BstH2I | RGCGCY | 1 cut(s) | 68 |
| BstHHI | GCGC | 1 cut(s) | 67 |
| BstKTI | GATC | 3 cut(s) | 905, 1285, 1348 |
| BstMAI | GTCTC | 5 cut(s) | 402, 1166, 1433, 1449, 1488 |
| BstMBI | GATC | 3 cut(s) | 902, 1282, 1345 |
| BstNI | CCWGG | 3 cut(s) | 873, 1011, 1436 |
| BstNSI | RCATGY | 1 cut(s) | 658 |
| BstSCI | CCNGG | 4 cut(s) | 871, 1009, 1434, 1517 |
| BstSFI | CTRYAG | 1 cut(s) | 1506 |
| BstSLI | GKGCMC | 1 cut(s) | 709 |
| BstUI | CGCG | 1 cut(s) | 1289 |
| BstV1I | GCAGC | 5 cut(s) | 118, 682, 1115, 1370, 1520 |
| BstV2I | GAAGAC | 1 cut(s) | 315 |
| BstX2I | RGATCY | 1 cut(s) | 902 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 55, 899, 1122 |
| BstYI | RGATCY | 1 cut(s) | 902 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1225 |
| BsuRI | GGCC | 5 cut(s) | 21, 422, 841, 1024, 1051 |
| BtgI | CCRYGG | 1 cut(s) | 1031 |
| BtsCI | GGATG | 3 cut(s) | 892, 1172, 1316 |
| BtsI | GCAGTG | 1 cut(s) | 135 |
| BtsIMutI | CAGTG | 6 cut(s) | 68, 135, 1052, 1131, 1189, 1494 |
| Cac8I | GCNNGC | 4 cut(s) | 807, 963, 1267, 1497 |
| CciI | TCATGA | 1 cut(s) | 585 |
| CfoI | GCGC | 1 cut(s) | 67 |
| Cfr13I | GGNCC | 3 cut(s) | 20, 1050, 1208 |
| CseI | GACGC | 1 cut(s) | 1470 |
| Csp6I | GTAC | 5 cut(s) | 735, 819, 998, 1136, 1413 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 213, 248 |
| CviAII | CATG | 9 cut(s) | 77, 471, 490, 586, 655, 1002, 1032, 1535, 1545 |
| CviQI | GTAC | 5 cut(s) | 735, 819, 998, 1136, 1413 |
| DdeI | CTNAG | 5 cut(s) | 270, 1039, 1044, 1184, 1225 |
| DinI | GGCGCC | 1 cut(s) | 66 |
| DpnI | GATC | 3 cut(s) | 904, 1284, 1347 |
| DpnII | GATC | 3 cut(s) | 902, 1282, 1345 |
| Eam1104I | CTCTTC | 2 cut(s) | 637, 1436 |
| EarI | CTCTTC | 2 cut(s) | 637, 1436 |
| EciI | GGCGGA | 1 cut(s) | 79 |
| Ecl136II | GAGCTC | 1 cut(s) | 1368 |
| Eco130I | CCWWGG | 2 cut(s) | 1019, 1031 |
| Eco147I | AGGCCT | 1 cut(s) | 841 |
| Eco24I | GRGCYC | 1 cut(s) | 1370 |
| Eco31I | GGTCTC | 2 cut(s) | 402, 1433 |
| Eco47I | GGWCC | 1 cut(s) | 1208 |
| Eco53kI | GAGCTC | 1 cut(s) | 1368 |
| Eco57I | CTGAAG | 3 cut(s) | 177, 618, 1287 |
| Eco72I | CACGTG | 1 cut(s) | 1471 |
| Eco81I | CCTNAGG | 1 cut(s) | 1225 |
| EcoICRI | GAGCTC | 1 cut(s) | 1368 |
| EcoO109I | RGGNCCY | 1 cut(s) | 20 |
| EcoRII | CCWGG | 3 cut(s) | 871, 1009, 1434 |
| EcoT14I | CCWWGG | 2 cut(s) | 1019, 1031 |
| EcoT38I | GRGCYC | 1 cut(s) | 1370 |
| EgeI | GGCGCC | 1 cut(s) | 66 |
| EheI | GGCGCC | 1 cut(s) | 66 |
| ErhI | CCWWGG | 2 cut(s) | 1019, 1031 |
| Esp3I | CGTCTC | 2 cut(s) | 1449, 1488 |
| FaeI | CATG | 9 cut(s) | 80, 474, 493, 589, 658, 1005, 1035, 1538, 1548 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 889, 921 |
| FaqI | GGGAC | 1 cut(s) | 1501 |
| FatI | CATG | 9 cut(s) | 76, 470, 489, 585, 654, 1001, 1031, 1534, 1544 |
| FauNDI | CATATG | 1 cut(s) | 1373 |
| Fnu4HI | GCNGC | 5 cut(s) | 132, 696, 1129, 1359, 1509 |
| FokI | GGATG | 3 cut(s) | 899, 1159, 1323 |
| FriOI | GRGCYC | 1 cut(s) | 1370 |
| Fsp4HI | GCNGC | 5 cut(s) | 132, 696, 1129, 1359, 1509 |
| FspBI | CTAG | 1 cut(s) | 690 |
| GlaI | GCGC | 1 cut(s) | 66 |
| GluI | GCNGC | 5 cut(s) | 132, 696, 1129, 1359, 1509 |
| GsuI | CTGGAG | 2 cut(s) | 597, 1470 |
| HaeII | RGCGCY | 1 cut(s) | 68 |
| HaeIII | GGCC | 5 cut(s) | 21, 422, 841, 1024, 1051 |
| HapII | CCGG | 2 cut(s) | 1139, 1519 |
| HgaI | GACGC | 1 cut(s) | 1470 |
| HhaI | GCGC | 1 cut(s) | 67 |
| Hin1I | GRCGYC | 1 cut(s) | 65 |
| Hin1II | CATG | 9 cut(s) | 80, 474, 493, 589, 658, 1005, 1035, 1538, 1548 |
| Hin6I | GCGC | 1 cut(s) | 65 |
| HinP1I | GCGC | 1 cut(s) | 65 |
| HincII | GTYRAC | 1 cut(s) | 529 |
| HindII | GTYRAC | 1 cut(s) | 529 |
| HindIII | AAGCTT | 2 cut(s) | 182, 982 |
| HinfI | GANTC | 9 cut(s) | 101, 119, 349, 442, 582, 758, 773, 1142, 1321 |
| HpaII | CCGG | 2 cut(s) | 1139, 1519 |
| HphI | GGTGA | 1 cut(s) | 1161 |
| Hpy166II | GTNNAC | 4 cut(s) | 235, 529, 707, 953 |
| Hpy188III | TCNNGA | 6 cut(s) | 158, 336, 586, 742, 1056, 1239 |
| Hpy8I | GTNNAC | 4 cut(s) | 235, 529, 707, 953 |
| Hpy99I | CGWCG | 1 cut(s) | 618 |
| HpyAV | CCTTC | 3 cut(s) | 11, 209, 250 |
| HpyCH4III | ACNGT | 5 cut(s) | 164, 557, 739, 1135, 1193 |
| HpyCH4IV | ACGT | 1 cut(s) | 1470 |
| HpyCH4V | TGCA | 9 cut(s) | 549, 676, 698, 707, 800, 1112, 1131, 1495, 1508 |
| HpyF3I | CTNAG | 5 cut(s) | 270, 1039, 1044, 1184, 1225 |
| HpySE526I | ACGT | 1 cut(s) | 1470 |
| Hsp92I | GRCGYC | 1 cut(s) | 65 |
| Hsp92II | CATG | 9 cut(s) | 80, 474, 493, 589, 658, 1005, 1035, 1538, 1548 |
| HspAI | GCGC | 1 cut(s) | 65 |
| KasI | GGCGCC | 1 cut(s) | 64 |
| Kzo9I | GATC | 3 cut(s) | 902, 1282, 1345 |
| LmnI | GCTCC | 4 cut(s) | 110, 1019, 1274, 1373 |
| Lsp1109I | GCAGC | 5 cut(s) | 118, 682, 1115, 1370, 1520 |
| LweI | GCATC | 2 cut(s) | 658, 877 |
| MaeI | CTAG | 1 cut(s) | 690 |
| MaeII | ACGT | 1 cut(s) | 1470 |
| MaeIII | GTNAC | 2 cut(s) | 650, 1521 |
| MalI | GATC | 3 cut(s) | 904, 1284, 1347 |
| MboI | GATC | 3 cut(s) | 902, 1282, 1345 |
| MflI | RGATCY | 1 cut(s) | 902 |
| MhlI | GDGCHC | 2 cut(s) | 709, 1370 |
| MluCI | AATT | 9 cut(s) | 205, 339, 517, 814, 852, 922, 1150, 1213, 1408 |
| Mly113I | GGCGCC | 1 cut(s) | 65 |
| MlyI | GAGTC | 3 cut(s) | 110, 436, 1136 |
| MseI | TTAA | 6 cut(s) | 314, 659, 969, 1257, 1334, 1392 |
| MslI | CAYNNNNRTG | 2 cut(s) | 659, 897 |
| MspA1I | CMGCKG | 1 cut(s) | 269 |
| MspI | CCGG | 2 cut(s) | 1139, 1519 |
| MspR9I | CCNGG | 4 cut(s) | 873, 1011, 1436, 1519 |
| Mva1269I | GAATGC | 1 cut(s) | 1065 |
| MvaI | CCWGG | 3 cut(s) | 873, 1011, 1436 |
| MvnI | CGCG | 1 cut(s) | 1289 |
| NarI | GGCGCC | 1 cut(s) | 65 |
| NciI | CCSGG | 1 cut(s) | 1519 |
| NcoI | CCATGG | 1 cut(s) | 1031 |
| NdeI | CATATG | 1 cut(s) | 1373 |
| NdeII | GATC | 3 cut(s) | 902, 1282, 1345 |
| NlaIII | CATG | 9 cut(s) | 80, 474, 493, 589, 658, 1005, 1035, 1538, 1548 |
| NlaIV | GGNNCC | 5 cut(s) | 22, 66, 112, 833, 1015 |
| NmuCI | GTSAC | 2 cut(s) | 650, 1521 |
| NspI | RCATGY | 1 cut(s) | 658 |
| OliI | CACNNNNGTG | 1 cut(s) | 897 |
| PagI | TCATGA | 1 cut(s) | 585 |
| PceI | AGGCCT | 1 cut(s) | 841 |
| PciI | ACATGT | 1 cut(s) | 654 |
| PctI | GAATGC | 1 cut(s) | 1065 |
| PfeI | GAWTC | 6 cut(s) | 119, 349, 582, 758, 773, 1321 |
| PkrI | GCNGC | 5 cut(s) | 133, 697, 1130, 1360, 1510 |
| PleI | GAGTC | 3 cut(s) | 109, 436, 1136 |
| PluTI | GGCGCC | 1 cut(s) | 68 |
| PmaCI | CACGTG | 1 cut(s) | 1471 |
| PmlI | CACGTG | 1 cut(s) | 1471 |
| PpsI | GAGTC | 3 cut(s) | 109, 436, 1136 |
| Ppu21I | YACGTR | 1 cut(s) | 1471 |
| PscI | ACATGT | 1 cut(s) | 654 |
| PsiI | TTATAA | 1 cut(s) | 513 |
| Psp124BI | GAGCTC | 1 cut(s) | 1370 |
| Psp6I | CCWGG | 3 cut(s) | 871, 1009, 1434 |
| PspCI | CACGTG | 1 cut(s) | 1471 |
| PspGI | CCWGG | 3 cut(s) | 871, 1009, 1434 |
| PspN4I | GGNNCC | 5 cut(s) | 22, 66, 112, 833, 1015 |
| PspPI | GGNCC | 3 cut(s) | 20, 1050, 1208 |
| PstI | CTGCAG | 1 cut(s) | 1510 |
| PsuI | RGATCY | 1 cut(s) | 902 |
| PvuII | CAGCTG | 1 cut(s) | 269 |
| RsaI | GTAC | 5 cut(s) | 736, 820, 999, 1137, 1414 |
| RsaNI | GTAC | 5 cut(s) | 735, 819, 998, 1136, 1413 |
| RseI | CAYNNNNRTG | 2 cut(s) | 659, 897 |
| SacI | GAGCTC | 1 cut(s) | 1370 |
| SaqAI | TTAA | 6 cut(s) | 314, 659, 969, 1257, 1334, 1392 |
| SatI | GCNGC | 5 cut(s) | 132, 696, 1129, 1359, 1509 |
| Sau3AI | GATC | 3 cut(s) | 902, 1282, 1345 |
| Sau96I | GGNCC | 3 cut(s) | 20, 1050, 1208 |
| SchI | GAGTC | 3 cut(s) | 110, 436, 1136 |
| ScrFI | CCNGG | 4 cut(s) | 873, 1011, 1436, 1519 |
| SduI | GDGCHC | 2 cut(s) | 709, 1370 |
| SfaNI | GCATC | 2 cut(s) | 658, 877 |
| SfcI | CTRYAG | 1 cut(s) | 1506 |
| SfoI | GGCGCC | 1 cut(s) | 66 |
| SinI | GGWCC | 1 cut(s) | 1208 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 659, 897 |
| SmlI | CTYRAG | 2 cut(s) | 895, 993 |
| SmoI | CTYRAG | 2 cut(s) | 895, 993 |
| Sse9I | AATT | 9 cut(s) | 205, 339, 517, 814, 852, 922, 1150, 1213, 1408 |
| SseBI | AGGCCT | 1 cut(s) | 841 |
| SsiI | CCGC | 1 cut(s) | 90 |
| SspDI | GGCGCC | 1 cut(s) | 64 |
| SspMI | CTAG | 1 cut(s) | 690 |
| SstI | GAGCTC | 1 cut(s) | 1370 |
| StuI | AGGCCT | 1 cut(s) | 841 |
| StyD4I | CCNGG | 4 cut(s) | 871, 1009, 1434, 1517 |
| StyI | CCWWGG | 2 cut(s) | 1019, 1031 |
| TaaI | ACNGT | 5 cut(s) | 164, 557, 739, 1135, 1193 |
| TaiI | ACGT | 1 cut(s) | 1473 |
| TaqI | TCGA | 1 cut(s) | 478 |
| TasI | AATT | 9 cut(s) | 205, 339, 517, 814, 852, 922, 1150, 1213, 1408 |
| TatI | WGTACW | 2 cut(s) | 818, 1412 |
| TfiI | GAWTC | 6 cut(s) | 119, 349, 582, 758, 773, 1321 |
| Tru1I | TTAA | 6 cut(s) | 314, 659, 969, 1257, 1334, 1392 |
| Tru9I | TTAA | 6 cut(s) | 314, 659, 969, 1257, 1334, 1392 |
| TscAI | CASTG | 6 cut(s) | 75, 142, 1052, 1138, 1196, 1494 |
| TseFI | GTSAC | 2 cut(s) | 650, 1521 |
| TseI | GCWGC | 5 cut(s) | 131, 695, 1128, 1358, 1508 |
| Tsp45I | GTSAC | 2 cut(s) | 650, 1521 |
| TspDTI | ATGAA | 3 cut(s) | 372, 915, 1413 |
| TspRI | CASTG | 6 cut(s) | 75, 142, 1052, 1138, 1196, 1494 |
| VneI | GTGCAC | 1 cut(s) | 705 |
| VpaK11BI | GGWCC | 1 cut(s) | 1208 |
| XapI | RAATTY | 3 cut(s) | 922, 1150, 1213 |
| XceI | RCATGY | 1 cut(s) | 658 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1017 |
| XspI | CTAG | 1 cut(s) | 690 |