Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002549.1

Orthogroup ID

OG0003750

Physical Location & Seq

Genomic Coordinates Forward (+)

79741 .. 82605

Gene Structure 2865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002549.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

atgtctgagaatgaaatcagccccaccataaagctcttcggaaagaccatacctttggcttcggcgccacacaacggccatgaggttccgaccaatgatgacccgccatgtggagcttccgactcttctgttgactctaagattgctgctgctgcttccggcggtggtgctgttgaagaagaagattgctcagtcaagcttccttgttgttcagaaactacttcgcctgaagaccaagagaacaaggaaacaatatcaggcaaagaattcactgctgacaaagaggaagatcatcccttagatcaattcacagaagacttgaaacctccaacaacatcgtcgggaattagtgagaatcccaaaactccctcagctgatagagaaacttcagtatctctgaaatcttctaagaatggagaacagagtgatgagaccagttgctcacaagacaagactctgaagaagccagacaagatacttccatgtccccgatgtaatagcatggacaccaagttctgttactacaacaactacaacgtcaatcagccccgccatttttgcaagaactgtcaaagatactggactgccggaggaatcatgaggaatgttcctgtgggagctggtcgtcggaagaacaagaacgcttcatcagcttcacactatcgccacatgttaatgtcggatgctctccaaacagctcatgctactgctgctgctgcttctaatggtgctcacaatccaacattgggaagaaatggcactgtccttacctttggttcagattctcctctttgtgaatcaatggcttctgtattgaaccttgccgagaaaacacaaaactctcttcagaatggttttcatgtacctgatcaacaaagaattctggttccttccataactggagataatggggatgaccaatcaagtggatcgtctaatgttacagcttcgaattcatcagaggggggatgcaaagctggtatacaagaaccagcggttcacaactgtcaaagcttctctcctcatcaagtaccatgctttccaggctccccttggccttatccatggaactcacctcagtggacctctgcaatgcctccgcctgcattcttccattctgggtttcccatatcattctaccctgcaccaccatactggggctgcactggacccggctcttggaatgtaccatgtaattctccaccatcctccaatcttagccactgtggtacaagctctggtccaaattccccgaccttagggaaacatccaagagacggggacattcttaatcaagccagctctcaaaaagaagagtccagcagagataacaggtcagatagatgtgttttgattccgaaaacgttaaggattgatgatcctagtgaagctgcaaagagctctatatgggaaacacttggcatcaagaatgaaaagggaaattctatcaacgagggaggtatcttcaagtcatttgaatccaagggacacgagaaaaggcaagttgttgaacaatcttcggtattgcaagctaatcctgcagccttttcccggtcactcaacttccgtgagatctcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0048519 GO:0048577 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048587 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-Dof

Protein Analysis

526

Amino Acids

56.52

Weight (kDa)

5.78

Isoelectric Point (pI)

52.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39660 AT5G39660 AT5G39660
fragaria_vesca	FvH4_4g31210 FvH4_6g48270 FvH4_6g48270
malus_domestica	MD00G1125100.v1.1 MD13G1070600.v1.1 MD16G1071400.v1.1
prunus_persica	Prupe.1G276000_v2.0.a1 Prupe.3G266200_v2.0.a1
pyrus_communis	pycom111g04390 pycom13g06340 pycom16g06180 pycom17g04800
rosa_chinensis	RchiOBHm_Chr2g0167771 RchiOBHm_Chr4g0439611
rosa_laevigata	RLG00000006255 RLG00000021752
rosa_multiflora	Rmu_sc0002549.1_g000020
rosa_roxburghii	Rroxscaffold_2G00083270 Rroxscaffold_5G00380530
rosa_rugosa	Rorug02G0532000 Rorug04G0320000
rosa_samantha	Rh2AG600900 Rh2BG611600 Rh2CG581800 Rh2DG624000 Rh4AG371200 Rh4BG382900 Rh4CG397500 Rh4DG377700
rosa_wichuraiana	Rw2G049900 Rw4G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	64
AccI	GTMKAC	1 cut(s)	982
AciI	CCGC	5 cut(s)	104, 162, 550, 995, 1100
AclI	AACGTT	1 cut(s)	1364
AclWI	GGATC	2 cut(s)	937, 1373
AcoI	YGGCCR	1 cut(s)	76
AcsI	RAATTY	5 cut(s)	266, 879, 952, 1246, 1441
AcuI	CTGAAG	4 cut(s)	249, 372, 479, 830
AcyI	GRCGYC	1 cut(s)	65
AfaI	GTAC	4 cut(s)	864, 1032, 1188, 1231
AfiI	CCNNNNNNNGG	8 cut(s)	74, 110, 746, 1157, 1179, 1259, 1277, 1551
AflIII	ACRYGT	1 cut(s)	669
AgsI	TTSAA	6 cut(s)	176, 322, 817, 1468, 1478, 1511
AjnI	CCWGG	1 cut(s)	1042
AleI	CACNNNNGTG	1 cut(s)	1078
AloI	GAACNNNNNNTCC	2 cut(s)	497, 529
Alw21I	GWGCWC	2 cut(s)	733, 1403
Alw26I	GTCTC	2 cut(s)	425, 1269
AlwI	GGATC	2 cut(s)	937, 1373
AoxI	GGCC	2 cut(s)	76, 1055
ApeKI	GCWGC	9 cut(s)	146, 149, 152, 710, 713, 716, 1161, 1391, 1541
ApoI	RAATTY	5 cut(s)	266, 879, 952, 1246, 1441
ArsI	GACNNNNNNTTYG	2 cut(s)	37, 69
AspLEI	GCGC	1 cut(s)	67
AspS9I	GGNCC	3 cut(s)	1083, 1169, 1241
AsuC2I	CCSGG	2 cut(s)	1173, 1552
AsuHPI	GGTGA	1 cut(s)	1065
AsuII	TTCGAA	1 cut(s)	950
AvaII	GGWCC	3 cut(s)	1083, 1169, 1241
AxyI	CCTNAGG	1 cut(s)	1258
BaeI	ACNNNNGTAYC	2 cut(s)	375, 408
BanI	GGYRCC	1 cut(s)	64
BanII	GRGCYC	1 cut(s)	1403
BauI	CACGAG	1 cut(s)	1490
BbsI	GAAGAC	2 cut(s)	237, 321
Bbv12I	GWGCWC	2 cut(s)	733, 1403
BbvCI	CCTCAGC	1 cut(s)	370
BbvI	GCAGC	9 cut(s)	133, 136, 139, 697, 700, 703, 1148, 1378, 1553
BccI	CCATC	1 cut(s)	1213
BceAI	ACGGC	1 cut(s)	91
BciT130I	CCWGG	1 cut(s)	1044
BclI	TGATCA	1 cut(s)	868
BcnI	CCSGG	2 cut(s)	1173, 1552
BcoDI	GTCTC	2 cut(s)	425, 1269
BfaI	CTAG	1 cut(s)	1383
BfmI	CTRYAG	1 cut(s)	1539
BfoI	RGCGCY	1 cut(s)	68
BglII	AGATCT	1 cut(s)	1572
BisI	GCNGC	9 cut(s)	147, 150, 153, 711, 714, 717, 1162, 1392, 1542
BlsI	GCNGC	9 cut(s)	148, 151, 154, 712, 715, 718, 1163, 1393, 1543
Bme1390I	CCNGG	3 cut(s)	1044, 1173, 1552
Bme18I	GGWCC	3 cut(s)	1083, 1169, 1241
BmgT120I	GGNCC	3 cut(s)	1083, 1169, 1241
BmiI	GGNNCC	5 cut(s)	66, 87, 888, 1048, 1171
BmrFI	CCNGG	3 cut(s)	1044, 1173, 1552
BmrI	ACTGGG	1 cut(s)	1165
BmsI	GCATC	3 cut(s)	673, 959, 1431
BmuI	ACTGGG	1 cut(s)	1165
BpiI	GAAGAC	2 cut(s)	237, 321
BpmI	CTGGAG	1 cut(s)	921
Bpu10I	CCTNAGC	1 cut(s)	370
Bpu14I	TTCGAA	1 cut(s)	950
BpuMI	CCSGG	2 cut(s)	1173, 1552
BsaHI	GRCGYC	1 cut(s)	65
BsaI	GGTCTC	1 cut(s)	425
BsaJI	CCNNGG	3 cut(s)	1052, 1064, 1482
Bsc4I	CCNNNNNNNGG	8 cut(s)	74, 110, 746, 1157, 1179, 1259, 1277, 1551
Bse1I	ACTGG	5 cut(s)	435, 584, 904, 1160, 1171
Bse21I	CCTNAGG	1 cut(s)	1258
Bse3DI	GCAATG	1 cut(s)	1098
BseBI	CCWGG	1 cut(s)	1044
BseDI	CCNNGG	3 cut(s)	1052, 1064, 1482
BseGI	GGATG	6 cut(s)	292, 688, 919, 974, 1205, 1267
BseLI	CCNNNNNNNGG	8 cut(s)	74, 110, 746, 1157, 1179, 1259, 1277, 1551
BseMI	GCAATG	1 cut(s)	1098
BseMII	CTCAG	3 cut(s)	204, 384, 1091
BseNI	ACTGG	5 cut(s)	435, 584, 904, 1160, 1171
BseRI	GAGGAG	2 cut(s)	777, 1011
BseXI	GCAGC	9 cut(s)	133, 136, 139, 697, 700, 703, 1148, 1378, 1553
BsgI	GTGCAG	2 cut(s)	1128, 1147
BshFI	GGCC	2 cut(s)	78, 1057
BshNI	GGYRCC	1 cut(s)	64
BsiHKAI	GWGCWC	2 cut(s)	733, 1403
BsiSI	CCGG	4 cut(s)	159, 588, 1173, 1552
BslFI	GGGAC	3 cut(s)	471, 1295, 1500
BslI	CCNNNNNNNGG	8 cut(s)	74, 110, 746, 1157, 1179, 1259, 1277, 1551
BsmAI	GTCTC	2 cut(s)	425, 1269
BsmBI	CGTCTC	1 cut(s)	1269
BsmFI	GGGAC	3 cut(s)	471, 1295, 1500
BsmI	GAATGC	1 cut(s)	1106
BsnI	GGCC	2 cut(s)	78, 1057
Bso31I	GGTCTC	1 cut(s)	425
Bsp119I	TTCGAA	1 cut(s)	950
Bsp1286I	GDGCHC	2 cut(s)	733, 1403
Bsp143I	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
Bsp19I	CCATGG	1 cut(s)	1064
BspACI	CCGC	5 cut(s)	104, 162, 550, 995, 1100
BspANI	GGCC	2 cut(s)	78, 1057
BspCNI	CTCAG	3 cut(s)	203, 383, 1090
BspHI	TCATGA	2 cut(s)	597, 1577
BspLI	GGNNCC	5 cut(s)	66, 87, 888, 1048, 1171
BspMAI	CTGCAG	1 cut(s)	1543
BspPI	GGATC	2 cut(s)	937, 1373
BspQI	GCTCTTC	1 cut(s)	41
BspT104I	TTCGAA	1 cut(s)	950
BspT107I	GGYRCC	1 cut(s)	64
BspTNI	GGTCTC	1 cut(s)	425
BsrDI	GCAATG	1 cut(s)	1098
BsrI	ACTGG	5 cut(s)	435, 584, 904, 1160, 1171
BssECI	CCNNGG	3 cut(s)	1052, 1064, 1482
BssMI	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
BssNAI	GTATAC	1 cut(s)	983
BssNI	GRCGYC	1 cut(s)	65
BssSI	CACGAG	1 cut(s)	1490
BssT1I	CCWWGG	3 cut(s)	1052, 1064, 1482
Bst1107I	GTATAC	1 cut(s)	983
Bst2BI	CACGAG	1 cut(s)	1490
Bst2UI	CCWGG	1 cut(s)	1044
Bst4CI	ACNGT	4 cut(s)	569, 763, 1007, 1226
Bst6I	CTCTTC	4 cut(s)	41, 130, 849, 1308
BstACI	GRCGYC	1 cut(s)	65
BstBI	TTCGAA	1 cut(s)	950
BstC8I	GCNNGC	3 cut(s)	1104, 1300, 1530
BstDEI	CTNAG	9 cut(s)	6, 138, 190, 298, 370, 408, 1077, 1217, 1258
BstDSI	CCRYGG	1 cut(s)	1064
BstF5I	GGATG	6 cut(s)	292, 688, 919, 974, 1205, 1267
BstH2I	RGCGCY	1 cut(s)	68
BstHHI	GCGC	1 cut(s)	67
BstKTI	GATC	6 cut(s)	292, 304, 871, 932, 1381, 1575
BstMAI	GTCTC	2 cut(s)	425, 1269
BstMBI	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
BstMWI	GCNNNNNNNGC	7 cut(s)	152, 558, 650, 710, 716, 1044, 1538
BstNI	CCWGG	1 cut(s)	1044
BstNSI	RCATGY	1 cut(s)	673
BstSCI	CCNGG	3 cut(s)	1042, 1171, 1550
BstSFI	CTRYAG	1 cut(s)	1539
BstV1I	GCAGC	9 cut(s)	133, 136, 139, 697, 700, 703, 1148, 1378, 1553
BstV2I	GAAGAC	2 cut(s)	237, 321
BstX2I	RGATCY	1 cut(s)	1572
BstXI	CCANNNNNNTGG	3 cut(s)	55, 926, 1155
BstYI	RGATCY	1 cut(s)	1572
BstZ17I	GTATAC	1 cut(s)	983
Bsu36I	CCTNAGG	1 cut(s)	1258
BsuRI	GGCC	2 cut(s)	78, 1057
BtgI	CCRYGG	1 cut(s)	1064
BtsCI	GGATG	6 cut(s)	292, 688, 919, 974, 1205, 1267
BtsI	GCAGTG	1 cut(s)	270
BtsIMutI	CAGTG	5 cut(s)	270, 759, 1085, 1164, 1222
Cac8I	GCNNGC	3 cut(s)	1104, 1300, 1530
CciI	TCATGA	2 cut(s)	597, 1577
CfoI	GCGC	1 cut(s)	67
Cfr13I	GGNCC	3 cut(s)	1083, 1169, 1241
Csp6I	GTAC	4 cut(s)	863, 1031, 1187, 1230
CviQI	GTAC	4 cut(s)	863, 1031, 1187, 1230
DdeI	CTNAG	9 cut(s)	6, 138, 190, 298, 370, 408, 1077, 1217, 1258
DinI	GGCGCC	1 cut(s)	66
DpnI	GATC	6 cut(s)	291, 303, 870, 931, 1380, 1574
DpnII	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
EaeI	YGGCCR	1 cut(s)	76
Eam1104I	CTCTTC	4 cut(s)	41, 130, 849, 1308
EarI	CTCTTC	4 cut(s)	41, 130, 849, 1308
EciI	GGCGGA	1 cut(s)	1089
Ecl136II	GAGCTC	1 cut(s)	1401
Eco130I	CCWWGG	3 cut(s)	1052, 1064, 1482
Eco24I	GRGCYC	1 cut(s)	1403
Eco31I	GGTCTC	1 cut(s)	425
Eco47I	GGWCC	3 cut(s)	1083, 1169, 1241
Eco53kI	GAGCTC	1 cut(s)	1401
Eco57I	CTGAAG	4 cut(s)	249, 372, 479, 830
Eco81I	CCTNAGG	1 cut(s)	1258
EcoICRI	GAGCTC	1 cut(s)	1401
EcoRI	GAATTC	3 cut(s)	266, 879, 952
EcoRII	CCWGG	1 cut(s)	1042
EcoT14I	CCWWGG	3 cut(s)	1052, 1064, 1482
EcoT38I	GRGCYC	1 cut(s)	1403
EgeI	GGCGCC	1 cut(s)	66
EheI	GGCGCC	1 cut(s)	66
ErhI	CCWWGG	3 cut(s)	1052, 1064, 1482
Esp3I	CGTCTC	1 cut(s)	1269
FaqI	GGGAC	3 cut(s)	471, 1295, 1500
FauI	CCCGC	2 cut(s)	111, 557
FbaI	TGATCA	1 cut(s)	868
FblI	GTMKAC	1 cut(s)	982
Fnu4HI	GCNGC	9 cut(s)	147, 150, 153, 711, 714, 717, 1162, 1392, 1542
FokI	GGATG	6 cut(s)	279, 695, 926, 981, 1192, 1254
FriOI	GRGCYC	1 cut(s)	1403
Fsp4HI	GCNGC	9 cut(s)	147, 150, 153, 711, 714, 717, 1162, 1392, 1542
FspBI	CTAG	1 cut(s)	1383
GlaI	GCGC	1 cut(s)	66
GluI	GCNGC	9 cut(s)	147, 150, 153, 711, 714, 717, 1162, 1392, 1542
GsuI	CTGGAG	1 cut(s)	921
HaeII	RGCGCY	1 cut(s)	68
HaeIII	GGCC	2 cut(s)	78, 1057
HapII	CCGG	4 cut(s)	159, 588, 1173, 1552
HhaI	GCGC	1 cut(s)	67
Hin1I	GRCGYC	1 cut(s)	65
Hin6I	GCGC	1 cut(s)	65
HinP1I	GCGC	1 cut(s)	65
HincII	GTYRAC	1 cut(s)	133
HindII	GTYRAC	1 cut(s)	133
HindIII	AAGCTT	2 cut(s)	197, 1012
HpaII	CCGG	4 cut(s)	159, 588, 1173, 1552
HphI	GGTGA	1 cut(s)	1065
Hpy166II	GTNNAC	4 cut(s)	133, 983, 1000, 1083
Hpy188III	TCNNGA	4 cut(s)	342, 598, 1426, 1578
Hpy8I	GTNNAC	4 cut(s)	133, 983, 1000, 1083
Hpy99I	CGWCG	2 cut(s)	343, 630
HpyAV	CCTTC	1 cut(s)	900
HpyCH4III	ACNGT	4 cut(s)	569, 763, 1007, 1226
HpyCH4IV	ACGT	2 cut(s)	537, 1364
HpyCH4V	TGCA	9 cut(s)	561, 972, 1091, 1106, 1145, 1164, 1394, 1528, 1541
HpyF10VI	GCNNNNNNNGC	7 cut(s)	152, 558, 650, 710, 716, 1044, 1538
HpyF3I	CTNAG	9 cut(s)	6, 138, 190, 298, 370, 408, 1077, 1217, 1258
HpySE526I	ACGT	2 cut(s)	537, 1364
Hsp92I	GRCGYC	1 cut(s)	65
HspAI	GCGC	1 cut(s)	65
KasI	GGCGCC	1 cut(s)	64
Ksp22I	TGATCA	1 cut(s)	868
Kzo9I	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
LguI	GCTCTTC	1 cut(s)	41
LmnI	GCTCC	3 cut(s)	113, 617, 1052
Lsp1109I	GCAGC	9 cut(s)	133, 136, 139, 697, 700, 703, 1148, 1378, 1553
LweI	GCATC	3 cut(s)	673, 959, 1431
MaeI	CTAG	1 cut(s)	1383
MaeII	ACGT	2 cut(s)	537, 1364
MaeIII	GTNAC	3 cut(s)	518, 940, 1554
MalI	GATC	6 cut(s)	291, 303, 870, 931, 1380, 1574
MboI	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
MflI	RGATCY	1 cut(s)	1572
MhlI	GDGCHC	2 cut(s)	733, 1403
MluCI	AATT	8 cut(s)	266, 305, 345, 879, 952, 1195, 1246, 1441
Mly113I	GGCGCC	1 cut(s)	65
MlyI	GAGTC	4 cut(s)	116, 128, 448, 1325
MmeI	TCCRAC	6 cut(s)	113, 144, 353, 608, 660, 764
MseI	TTAA	3 cut(s)	674, 1290, 1367
MslI	CAYNNNNRTG	2 cut(s)	674, 1078
MspA1I	CMGCKG	2 cut(s)	374, 995
MspI	CCGG	4 cut(s)	159, 588, 1173, 1552
MspR9I	CCNGG	3 cut(s)	1044, 1173, 1552
Mva1269I	GAATGC	1 cut(s)	1106
MvaI	CCWGG	1 cut(s)	1044
MwoI	GCNNNNNNNGC	7 cut(s)	152, 558, 650, 710, 716, 1044, 1538
NarI	GGCGCC	1 cut(s)	65
NciI	CCSGG	2 cut(s)	1173, 1552
NcoI	CCATGG	1 cut(s)	1064
NdeII	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
NlaIV	GGNNCC	5 cut(s)	66, 87, 888, 1048, 1171
NmeAIII	GCCGAG	1 cut(s)	850
NmuCI	GTSAC	1 cut(s)	1554
NspI	RCATGY	1 cut(s)	673
NspV	TTCGAA	1 cut(s)	950
OliI	CACNNNNGTG	1 cut(s)	1078
PagI	TCATGA	2 cut(s)	597, 1577
PciI	ACATGT	1 cut(s)	669
PciSI	GCTCTTC	1 cut(s)	41
PctI	GAATGC	1 cut(s)	1106
PfeI	GAWTC	6 cut(s)	355, 594, 782, 797, 1354, 1478
PkrI	GCNGC	9 cut(s)	148, 151, 154, 712, 715, 718, 1163, 1393, 1543
PleI	GAGTC	4 cut(s)	116, 128, 448, 1324
PluTI	GGCGCC	1 cut(s)	68
PpsI	GAGTC	4 cut(s)	116, 128, 448, 1324
PscI	ACATGT	1 cut(s)	669
Psp124BI	GAGCTC	1 cut(s)	1403
Psp1406I	AACGTT	1 cut(s)	1364
Psp6I	CCWGG	1 cut(s)	1042
PspGI	CCWGG	1 cut(s)	1042
PspN4I	GGNNCC	5 cut(s)	66, 87, 888, 1048, 1171
PspPI	GGNCC	3 cut(s)	1083, 1169, 1241
PstI	CTGCAG	1 cut(s)	1543
PsuI	RGATCY	1 cut(s)	1572
PvuII	CAGCTG	1 cut(s)	374
RsaI	GTAC	4 cut(s)	864, 1032, 1188, 1231
RsaNI	GTAC	4 cut(s)	863, 1031, 1187, 1230
RseI	CAYNNNNRTG	2 cut(s)	674, 1078
SacI	GAGCTC	1 cut(s)	1403
SapI	GCTCTTC	1 cut(s)	41
SaqAI	TTAA	3 cut(s)	674, 1290, 1367
SatI	GCNGC	9 cut(s)	147, 150, 153, 711, 714, 717, 1162, 1392, 1542
Sau3AI	GATC	6 cut(s)	289, 301, 868, 929, 1378, 1572
Sau96I	GGNCC	3 cut(s)	1083, 1169, 1241
SchI	GAGTC	4 cut(s)	116, 128, 448, 1325
ScrFI	CCNGG	3 cut(s)	1044, 1173, 1552
SduI	GDGCHC	2 cut(s)	733, 1403
SfaNI	GCATC	3 cut(s)	673, 959, 1431
SfcI	CTRYAG	1 cut(s)	1539
SfoI	GGCGCC	1 cut(s)	66
SfuI	TTCGAA	1 cut(s)	950
SinI	GGWCC	3 cut(s)	1083, 1169, 1241
SmiMI	CAYNNNNRTG	2 cut(s)	674, 1078
Sse9I	AATT	8 cut(s)	266, 305, 345, 879, 952, 1195, 1246, 1441
SsiI	CCGC	5 cut(s)	104, 162, 550, 995, 1100
SspDI	GGCGCC	1 cut(s)	64
SspMI	CTAG	1 cut(s)	1383
SstI	GAGCTC	1 cut(s)	1403
StyD4I	CCNGG	3 cut(s)	1042, 1171, 1550
StyI	CCWWGG	3 cut(s)	1052, 1064, 1482
TaaI	ACNGT	4 cut(s)	569, 763, 1007, 1226
TaiI	ACGT	2 cut(s)	540, 1367
TaqI	TCGA	1 cut(s)	950
TasI	AATT	8 cut(s)	266, 305, 345, 879, 952, 1195, 1246, 1441
TfiI	GAWTC	6 cut(s)	355, 594, 782, 797, 1354, 1478
Tru1I	TTAA	3 cut(s)	674, 1290, 1367
Tru9I	TTAA	3 cut(s)	674, 1290, 1367
TscAI	CASTG	5 cut(s)	277, 766, 1085, 1171, 1229
TseFI	GTSAC	1 cut(s)	1554
TseI	GCWGC	9 cut(s)	146, 149, 152, 710, 713, 716, 1161, 1391, 1541
Tsp45I	GTSAC	1 cut(s)	1554
TspDTI	ATGAA	5 cut(s)	27, 636, 848, 945, 1446
TspGWI	ACGGA	1 cut(s)	1556
TspRI	CASTG	5 cut(s)	277, 766, 1085, 1171, 1229
VpaK11BI	GGWCC	3 cut(s)	1083, 1169, 1241
XapI	RAATTY	5 cut(s)	266, 879, 952, 1246, 1441
XceI	RCATGY	1 cut(s)	673
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1050
XmiI	GTMKAC	1 cut(s)	982
XspI	CTAG	1 cut(s)	1383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.