Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004660

Physical Location & Seq

Genomic Coordinates Forward (+)

32850747 .. 32858052

Gene Structure 7306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G353200.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGGCAGCTGTGAGCATGGCAGGGGCAGGGGTTATTGGAGTTGGAGGAGGTGATGTTTGGAGGGCACATGCGGCCATGGCCGTGGTTCAGCTCTTCAACGGAGGGTATCATGTGATTACCAAAGTGGCCCTCAATGTTGGCATCAACCAGCTTGTATTCTGCGTATTCCGGGACCTCCTTGCTCTTGCCATCCTTGCTCCCATCGCCTACGTCCGTGAAAAACGGATTCGACAACCAATGAATAGACGCCTGTTCATGTCCTTCTTCTTTCTTGGACTAAGTGGGATCTTTGGCAACCAGCTTTTGTTTCTTATTGGTCTTGGCTACACTAATCCAACTTATGCTGCTGCGATACAGCCTGCTATCCCAGTGTTTACGTTTATCCTGGCTGTTCTAATGGGTACAGAAAGAGTGAACTTGCTTAGAACTGAGGGGCAGGCAAAGGTTGGCGGTACACTTGTATGTGTTTTTGGAGCCATATTAATGGTCTTATTCCGGGGACCTGTTTTGATTGGATATATAGAGCCAGACTTTGCAGCACAGAACGAAATAAGTGCCAGAGGTCAACCAGAGCCAGCTGGATGGTTGATGTCTAGTTTTCTACAGTTTGGGCTAGATCATTTTCATCTTGGAGTTTTATGCTTATTAGGAAACTGTATGTGCATGGCCGCTTTTTTAGCCATTCAGGCTCCACTTTTGAAAAGATATCCTGCCAACTTGTCAGTCACAGCATATTCATACTTCTTCGGTGCTCTTTTGATGGTGGTGACCGCATTATTTATGACAAATGAGTCAACAGACTGGAGCTTGACACAGTCTGAGCTTTTTGCTGTTATTTACGCTGGAACTGTTGCATCTGCCCTTAATTATGGACTGCTGACATGGAGCAATAAGATTTTGGGGCCTGCTTTAGTTGCTCTTTACAATCCACTTCAACCTGCAGCTTCGGCCTTTTTGTCAAGAATTTTCCTTGGAAGTCCTATTTATTTGGGAAGTGTTTTAGGGGGATTACTAATTATTGCTGGTCTTTATGTGGTGACTTGGGCGTCTTTGAGAGAAAGACAAGCAGCTCCGGATGTTATGCCTCACGTGGCTCGAGCCTCCGAACCTCTCATCCACAAAGATGCAACAATTAACAAGATACCATACCAGAGAGGACTTATTTTCTCAGGGCCTTCCAACTCGTTGCCAAAATCGTCAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0006810 GO:0008150 GO:0012505 GO:0016020 GO:0022857 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

402

Amino Acids

43.19

Weight (kDa)

9.19

Isoelectric Point (pI)

37.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004660)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45870 AT3G45870 AT3G45870 AT3G45870 AT3G45870 AT3G45870 AT3G45870 AT3G45870 AT3G45870 AT4G19185 AT4G19185
fragaria_vesca	FvH4_2g37290 FvH4_2g37290
malus_domestica	MD08G1001200.v1.1
prunus_persica	Prupe.1G353200_v2.0.a1 Prupe.1G353200_v2.0.a1 Prupe.1G353200_v2.0.a1 Prupe.1G353200_v2.0.a1
pyrus_communis	pycom08g00050 pycom15g00010
rosa_chinensis	RchiOBHm_Chr6g0304411
rosa_laevigata	RLG00000010981
rosa_multiflora	Rmu_co8418059.1_g000001 Rmu_ssc0000218.1_g000048
rosa_roxburghii	Rroxscaffold_7G00163760
rosa_rugosa	Rorug06G0331300
rosa_samantha	Rh6AG444200 Rh6BG458200 Rh6CG457000 Rh6DG443700
rosa_wichuraiana	Rw6G038560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	790, 1045
Acc36I	ACCTGC	1 cut(s)	946
AccIII	TCCGGA	1 cut(s)	1072
AciI	CCGC	4 cut(s)	71, 450, 669, 771
AclWI	GGATC	1 cut(s)	293
AcoI	YGGCCR	3 cut(s)	72, 78, 666
AcsI	RAATTY	1 cut(s)	963
AcvI	CACGTG	1 cut(s)	1090
AcyI	GRCGYC	2 cut(s)	247, 1046
AfaI	GTAC	2 cut(s)	403, 454
AgsI	TTSAA	3 cut(s)	97, 700, 935
AjnI	CCWGG	1 cut(s)	384
AloI	GAACNNNNNNTCC	2 cut(s)	1098, 1130
AluBI	AGCT	9 cut(s)	8, 91, 151, 301, 578, 807, 823, 944, 1070
AluI	AGCT	9 cut(s)	8, 91, 151, 301, 578, 807, 823, 944, 1070
Alw21I	GWGCWC	1 cut(s)	754
AlwI	GGATC	1 cut(s)	293
Ama87I	CYCGRG	1 cut(s)	1095
Aor13HI	TCCGGA	1 cut(s)	1072
AoxI	GGCC	7 cut(s)	72, 78, 126, 666, 902, 948, 1172
ApeKI	GCWGC	6 cut(s)	5, 344, 347, 536, 941, 1067
ApoI	RAATTY	1 cut(s)	963
AseI	ATTAAT	1 cut(s)	482
AspS9I	GGNCC	5 cut(s)	127, 172, 500, 902, 1172
AsuC2I	CCSGG	2 cut(s)	170, 497
AsuHPI	GGTGA	3 cut(s)	62, 778, 1048
AvaI	CYCGRG	1 cut(s)	1095
AvaII	GGWCC	2 cut(s)	172, 500
BaeGI	GKGCMC	1 cut(s)	67
BaeI	ACNNNNGTAYC	2 cut(s)	444, 477
BbrPI	CACGTG	1 cut(s)	1090
Bbv12I	GWGCWC	1 cut(s)	754
BbvI	GCAGC	6 cut(s)	17, 331, 334, 548, 953, 1079
BccI	CCATC	4 cut(s)	197, 209, 576, 754
BceAI	ACGGC	1 cut(s)	65
BcgI	CGANNNNNNTGC	2 cut(s)	536, 570
BciT130I	CCWGG	1 cut(s)	386
BcnI	CCSGG	2 cut(s)	170, 497
BfaI	CTAG	2 cut(s)	594, 614
BfmI	CTRYAG	2 cut(s)	602, 939
BfuAI	ACCTGC	1 cut(s)	946
BglI	GCCNNNNNGGC	1 cut(s)	686
BisI	GCNGC	8 cut(s)	6, 72, 345, 348, 537, 669, 942, 1068
BlsI	GCNGC	8 cut(s)	7, 73, 346, 349, 538, 670, 943, 1069
Bme1390I	CCNGG	3 cut(s)	170, 386, 497
Bme18I	GGWCC	2 cut(s)	172, 500
BmeT110I	CYCGRG	1 cut(s)	1095
BmgT120I	GGNCC	5 cut(s)	127, 172, 500, 902, 1172
BmiI	GGNNCC	5 cut(s)	173, 475, 501, 690, 903
BmrFI	CCNGG	3 cut(s)	170, 386, 497
BmrI	ACTGGG	1 cut(s)	362
BmsI	GCATC	3 cut(s)	150, 863, 1114
BmuI	ACTGGG	1 cut(s)	362
BpmI	CTGGAG	1 cut(s)	823
BpuMI	CCSGG	2 cut(s)	170, 497
BsaAI	YACGTR	1 cut(s)	1090
BsaHI	GRCGYC	2 cut(s)	247, 1046
BsaJI	CCNNGG	4 cut(s)	75, 81, 496, 970
BsaWI	WCCGGW	1 cut(s)	1072
BsaXI	ACNNNNNCTCC	2 cut(s)	39, 69
Bse1I	ACTGG	2 cut(s)	368, 806
BseAI	TCCGGA	1 cut(s)	1072
BseBI	CCWGG	1 cut(s)	386
BseDI	CCNNGG	4 cut(s)	75, 81, 496, 970
BseGI	GGATG	4 cut(s)	189, 587, 1081, 1113
BseMII	CTCAG	3 cut(s)	420, 810, 1182
BseNI	ACTGG	2 cut(s)	368, 806
BseRI	GAGGAG	1 cut(s)	60
BseSI	GKGCMC	1 cut(s)	67
BseXI	GCAGC	6 cut(s)	17, 331, 334, 548, 953, 1079
BshFI	GGCC	7 cut(s)	74, 80, 128, 668, 904, 950, 1174
BsiHKAI	GWGCWC	1 cut(s)	754
BsiHKCI	CYCGRG	1 cut(s)	1095
BsiSI	CCGG	3 cut(s)	169, 496, 1073
BslFI	GGGAC	2 cut(s)	185, 513
BsmFI	GGGAC	2 cut(s)	185, 513
BsnI	GGCC	7 cut(s)	74, 80, 128, 668, 904, 950, 1174
BsoBI	CYCGRG	1 cut(s)	1095
Bsp1286I	GDGCHC	2 cut(s)	67, 754
Bsp13I	TCCGGA	1 cut(s)	1072
Bsp143I	GATC	2 cut(s)	285, 616
Bsp19I	CCATGG	1 cut(s)	75
BspACI	CCGC	4 cut(s)	71, 450, 669, 771
BspANI	GGCC	7 cut(s)	74, 80, 128, 668, 904, 950, 1174
BspCNI	CTCAG	3 cut(s)	421, 811, 1181
BspEI	TCCGGA	1 cut(s)	1072
BspLI	GGNNCC	5 cut(s)	173, 475, 501, 690, 903
BspMAI	CTGCAG	1 cut(s)	943
BspMI	ACCTGC	1 cut(s)	946
BspPI	GGATC	1 cut(s)	293
BspQI	GCTCTTC	1 cut(s)	98
BsrI	ACTGG	2 cut(s)	368, 806
BssECI	CCNNGG	4 cut(s)	75, 81, 496, 970
BssMI	GATC	2 cut(s)	285, 616
BssNI	GRCGYC	2 cut(s)	247, 1046
BssT1I	CCWWGG	2 cut(s)	75, 970
Bst2UI	CCWGG	1 cut(s)	386
Bst4CI	ACNGT	4 cut(s)	606, 656, 816, 850
Bst6I	CTCTTC	1 cut(s)	98
BstACI	GRCGYC	2 cut(s)	247, 1046
BstBAI	YACGTR	1 cut(s)	1090
BstC8I	GCNNGC	4 cut(s)	360, 438, 576, 906
BstDEI	CTNAG	5 cut(s)	278, 422, 429, 819, 1168
BstDSI	CCRYGG	2 cut(s)	75, 81
BstEII	GGTNACC	1 cut(s)	766
BstF5I	GGATG	4 cut(s)	189, 587, 1081, 1113
BstKTI	GATC	2 cut(s)	288, 619
BstMBI	GATC	2 cut(s)	285, 616
BstMWI	GCNNNNNNNGC	8 cut(s)	71, 77, 194, 203, 677, 686, 914, 947
BstNI	CCWGG	1 cut(s)	386
BstNSI	RCATGY	1 cut(s)	71
BstPI	GGTNACC	1 cut(s)	766
BstSCI	CCNGG	3 cut(s)	168, 384, 495
BstSFI	CTRYAG	2 cut(s)	602, 939
BstSLI	GKGCMC	1 cut(s)	67
BstV1I	GCAGC	6 cut(s)	17, 331, 334, 548, 953, 1079
BstX2I	RGATCY	1 cut(s)	285
BstXI	CCANNNNNNTGG	3 cut(s)	82, 484, 582
BstYI	RGATCY	1 cut(s)	285
BsuRI	GGCC	7 cut(s)	74, 80, 128, 668, 904, 950, 1174
BtgI	CCRYGG	2 cut(s)	75, 81
BtgZI	GCGATG	1 cut(s)	187
BtsCI	GGATG	4 cut(s)	189, 587, 1081, 1113
BtsIMutI	CAGTG	1 cut(s)	375
BveI	ACCTGC	1 cut(s)	946
Cac8I	GCNNGC	4 cut(s)	360, 438, 576, 906
Cfr13I	GGNCC	5 cut(s)	127, 172, 500, 902, 1172
CseI	GACGC	2 cut(s)	255, 1035
Csp6I	GTAC	2 cut(s)	402, 453
CviAII	CATG	7 cut(s)	16, 68, 76, 110, 256, 664, 882
CviQI	GTAC	2 cut(s)	402, 453
DdeI	CTNAG	5 cut(s)	278, 422, 429, 819, 1168
DpnI	GATC	2 cut(s)	287, 618
DpnII	GATC	2 cut(s)	285, 616
DrdI	GACNNNNNNGTC	2 cut(s)	790, 1045
DseDI	GACNNNNNNGTC	2 cut(s)	790, 1045
EaeI	YGGCCR	3 cut(s)	72, 78, 666
Eam1104I	CTCTTC	1 cut(s)	98
EarI	CTCTTC	1 cut(s)	98
Eco130I	CCWWGG	2 cut(s)	75, 970
Eco32I	GATATC	1 cut(s)	707
Eco47I	GGWCC	2 cut(s)	172, 500
Eco72I	CACGTG	1 cut(s)	1090
Eco88I	CYCGRG	1 cut(s)	1095
Eco91I	GGTNACC	1 cut(s)	766
EcoO109I	RGGNCCY	4 cut(s)	172, 500, 902, 1172
EcoO65I	GGTNACC	1 cut(s)	766
EcoRII	CCWGG	1 cut(s)	384
EcoRV	GATATC	1 cut(s)	707
EcoT14I	CCWWGG	2 cut(s)	75, 970
ErhI	CCWWGG	2 cut(s)	75, 970
FaeI	CATG	7 cut(s)	19, 71, 79, 113, 259, 667, 885
FaqI	GGGAC	2 cut(s)	185, 513
FatI	CATG	7 cut(s)	15, 67, 75, 109, 255, 663, 881
Fnu4HI	GCNGC	8 cut(s)	6, 72, 345, 348, 537, 669, 942, 1068
FokI	GGATG	4 cut(s)	176, 594, 1088, 1100
Fsp4HI	GCNGC	8 cut(s)	6, 72, 345, 348, 537, 669, 942, 1068
FspBI	CTAG	2 cut(s)	594, 614
GluI	GCNGC	8 cut(s)	6, 72, 345, 348, 537, 669, 942, 1068
GsuI	CTGGAG	1 cut(s)	823
HaeIII	GGCC	7 cut(s)	74, 80, 128, 668, 904, 950, 1174
HapII	CCGG	3 cut(s)	169, 496, 1073
HgaI	GACGC	2 cut(s)	255, 1035
Hin1I	GRCGYC	2 cut(s)	247, 1046
Hin1II	CATG	7 cut(s)	19, 71, 79, 113, 259, 667, 885
HincII	GTYRAC	2 cut(s)	566, 795
HindII	GTYRAC	2 cut(s)	566, 795
HinfI	GANTC	2 cut(s)	226, 791
HpaII	CCGG	3 cut(s)	169, 496, 1073
HphI	GGTGA	3 cut(s)	62, 778, 1048
Hpy166II	GTNNAC	5 cut(s)	375, 415, 455, 566, 795
Hpy188I	TCNGA	3 cut(s)	820, 1105, 1201
Hpy188III	TCNNGA	2 cut(s)	960, 1073
Hpy8I	GTNNAC	5 cut(s)	375, 415, 455, 566, 795
HpyAV	CCTTC	2 cut(s)	271, 1185
HpyCH4III	ACNGT	4 cut(s)	606, 656, 816, 850
HpyCH4IV	ACGT	3 cut(s)	210, 377, 1089
HpyCH4V	TGCA	5 cut(s)	536, 663, 854, 941, 1127
HpyF10VI	GCNNNNNNNGC	8 cut(s)	71, 77, 194, 203, 677, 686, 914, 947
HpyF3I	CTNAG	5 cut(s)	278, 422, 429, 819, 1168
HpySE526I	ACGT	3 cut(s)	210, 377, 1089
Hsp92I	GRCGYC	2 cut(s)	247, 1046
Hsp92II	CATG	7 cut(s)	19, 71, 79, 113, 259, 667, 885
Kpn2I	TCCGGA	1 cut(s)	1072
Kzo9I	GATC	2 cut(s)	285, 616
LguI	GCTCTTC	1 cut(s)	98
LmnI	GCTCC	6 cut(s)	202, 473, 694, 804, 885, 1075
Lsp1109I	GCAGC	6 cut(s)	17, 331, 334, 548, 953, 1079
LweI	GCATC	3 cut(s)	150, 863, 1114
MaeI	CTAG	2 cut(s)	594, 614
MaeII	ACGT	3 cut(s)	210, 377, 1089
MaeIII	GTNAC	3 cut(s)	724, 766, 1036
MalI	GATC	2 cut(s)	287, 618
MboI	GATC	2 cut(s)	285, 616
MboII	GAAGA	3 cut(s)	85, 256, 736
MflI	RGATCY	1 cut(s)	285
MhlI	GDGCHC	2 cut(s)	67, 754
MluCI	AATT	4 cut(s)	865, 963, 1014, 1131
MlyI	GAGTC	1 cut(s)	800
MmeI	TCCRAC	3 cut(s)	22, 359, 1203
MroI	TCCGGA	1 cut(s)	1072
MseI	TTAA	3 cut(s)	482, 864, 1134
MslI	CAYNNNNRTG	4 cut(s)	80, 460, 482, 1122
MspA1I	CMGCKG	2 cut(s)	8, 578
MspI	CCGG	3 cut(s)	169, 496, 1073
MspR9I	CCNGG	3 cut(s)	170, 386, 497
MvaI	CCWGG	1 cut(s)	386
MwoI	GCNNNNNNNGC	8 cut(s)	71, 77, 194, 203, 677, 686, 914, 947
NciI	CCSGG	2 cut(s)	170, 497
NcoI	CCATGG	1 cut(s)	75
NdeII	GATC	2 cut(s)	285, 616
NlaIII	CATG	7 cut(s)	19, 71, 79, 113, 259, 667, 885
NlaIV	GGNNCC	5 cut(s)	173, 475, 501, 690, 903
NmuCI	GTSAC	3 cut(s)	724, 766, 1036
NspI	RCATGY	1 cut(s)	71
PaeR7I	CTCGAG	1 cut(s)	1095
PciSI	GCTCTTC	1 cut(s)	98
PfeI	GAWTC	1 cut(s)	226
PflFI	GACNNNGTC	1 cut(s)	814
PfoI	TCCNGGA	1 cut(s)	168
PkrI	GCNGC	8 cut(s)	7, 73, 346, 349, 538, 670, 943, 1069
PleI	GAGTC	1 cut(s)	799
PmaCI	CACGTG	1 cut(s)	1090
PmlI	CACGTG	1 cut(s)	1090
PpsI	GAGTC	1 cut(s)	799
Ppu21I	YACGTR	1 cut(s)	1090
PpuMI	RGGWCCY	2 cut(s)	172, 500
PshBI	ATTAAT	1 cut(s)	482
Psp5II	RGGWCCY	2 cut(s)	172, 500
Psp6I	CCWGG	1 cut(s)	384
PspCI	CACGTG	1 cut(s)	1090
PspEI	GGTNACC	1 cut(s)	766
PspGI	CCWGG	1 cut(s)	384
PspN4I	GGNNCC	5 cut(s)	173, 475, 501, 690, 903
PspPI	GGNCC	5 cut(s)	127, 172, 500, 902, 1172
PspPPI	RGGWCCY	2 cut(s)	172, 500
PspXI	VCTCGAGB	1 cut(s)	1095
PstI	CTGCAG	1 cut(s)	943
PsuI	RGATCY	1 cut(s)	285
PsyI	GACNNNGTC	1 cut(s)	814
PvuII	CAGCTG	2 cut(s)	8, 578
RsaI	GTAC	2 cut(s)	403, 454
RsaNI	GTAC	2 cut(s)	402, 453
RseI	CAYNNNNRTG	4 cut(s)	80, 460, 482, 1122
SapI	GCTCTTC	1 cut(s)	98
SaqAI	TTAA	3 cut(s)	482, 864, 1134
SatI	GCNGC	8 cut(s)	6, 72, 345, 348, 537, 669, 942, 1068
Sau3AI	GATC	2 cut(s)	285, 616
Sau96I	GGNCC	5 cut(s)	127, 172, 500, 902, 1172
SchI	GAGTC	1 cut(s)	800
ScrFI	CCNGG	3 cut(s)	170, 386, 497
SduI	GDGCHC	2 cut(s)	67, 754
SfaNI	GCATC	3 cut(s)	150, 863, 1114
SfcI	CTRYAG	2 cut(s)	602, 939
Sfr274I	CTCGAG	1 cut(s)	1095
SinI	GGWCC	2 cut(s)	172, 500
SlaI	CTCGAG	1 cut(s)	1095
SmiMI	CAYNNNNRTG	4 cut(s)	80, 460, 482, 1122
SmlI	CTYRAG	1 cut(s)	1095
SmoI	CTYRAG	1 cut(s)	1095
Sse9I	AATT	4 cut(s)	865, 963, 1014, 1131
SsiI	CCGC	4 cut(s)	71, 450, 669, 771
SspMI	CTAG	2 cut(s)	594, 614
StyD4I	CCNGG	3 cut(s)	168, 384, 495
StyI	CCWWGG	2 cut(s)	75, 970
TaaI	ACNGT	4 cut(s)	606, 656, 816, 850
TaiI	ACGT	3 cut(s)	213, 380, 1092
TaqI	TCGA	2 cut(s)	229, 1096
TasI	AATT	4 cut(s)	865, 963, 1014, 1131
TauI	GCSGC	2 cut(s)	74, 671
TfiI	GAWTC	1 cut(s)	226
Tru1I	TTAA	3 cut(s)	482, 864, 1134
Tru9I	TTAA	3 cut(s)	482, 864, 1134
TscAI	CASTG	1 cut(s)	375
TseFI	GTSAC	3 cut(s)	724, 766, 1036
TseI	GCWGC	6 cut(s)	5, 344, 347, 536, 941, 1067
Tsp45I	GTSAC	3 cut(s)	724, 766, 1036
TspDTI	ATGAA	4 cut(s)	244, 254, 614, 726
TspGWI	ACGGA	3 cut(s)	114, 203, 238
TspRI	CASTG	1 cut(s)	375
Tth111I	GACNNNGTC	1 cut(s)	814
VpaK11BI	GGWCC	2 cut(s)	172, 500
VspI	ATTAAT	1 cut(s)	482
XapI	RAATTY	1 cut(s)	963
XceI	RCATGY	1 cut(s)	71
XhoI	CTCGAG	1 cut(s)	1095
XspI	CTAG	2 cut(s)	594, 614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.