pycom08g00050

WAT1-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
80863 .. 83280
2418 bp
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UTR
Exon/CDS
Intron
pycom08g00050.1

Sequence Viewer

Length: 267 bp
ATGGTCTTATTTCGTGGACCTCCTTTGATTGGATATACAGAACCAGACTTTGCAGCACATAGCGAAATAAGTGCCAAAGGTCAACCAGAGCCAGCTGGATGGTTGATGTCCAGTTTTCTAGAGTTTGGGCTAGATCACTTTCATCTTGGAGTTTTATGCTTATTAGGGAACTGTATGTGCATGGCCGCTTTTTTAGCCATTCAGTTTCATTCTCATCCTAGATGCACCTTACTTGCCTTTTTTTCCCTTACTTTAGCCAATTTATAG

Protein Analysis

89

Amino Acids

9.67

Weight (kDa)

5.85

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 186
AcoI YGGCCR 1 cut(s) 183
AfiI CCNNNNNNNGG 1 cut(s) 29
AluBI AGCT 1 cut(s) 95
AluI AGCT 1 cut(s) 95
AoxI GGCC 1 cut(s) 183
ApeKI GCWGC 1 cut(s) 53
AspS9I GGNCC 1 cut(s) 17
AvaII GGWCC 1 cut(s) 17
BbvI GCAGC 1 cut(s) 65
BccI CCATC 1 cut(s) 93
BcgI CGANNNNNNTGC 2 cut(s) 53, 87
BfaI CTAG 3 cut(s) 119, 131, 219
BisI GCNGC 2 cut(s) 54, 186
BlsI GCNGC 2 cut(s) 55, 187
Bme18I GGWCC 1 cut(s) 17
BmgT120I GGNCC 1 cut(s) 17
BmsI GCATC 1 cut(s) 212
Bsc4I CCNNNNNNNGG 1 cut(s) 29
Bse1I ACTGG 1 cut(s) 111
BseGI GGATG 2 cut(s) 104, 214
BseLI CCNNNNNNNGG 1 cut(s) 29
BseNI ACTGG 1 cut(s) 111
BseXI GCAGC 1 cut(s) 65
BshFI GGCC 1 cut(s) 185
BslI CCNNNNNNNGG 1 cut(s) 29
BsnI GGCC 1 cut(s) 185
Bsp143I GATC 1 cut(s) 133
BspACI CCGC 1 cut(s) 186
BspANI GGCC 1 cut(s) 185
BsrI ACTGG 1 cut(s) 111
BssMI GATC 1 cut(s) 133
Bst4CI ACNGT 1 cut(s) 173
BstC8I GCNNGC 1 cut(s) 93
BstF5I GGATG 2 cut(s) 104, 214
BstKTI GATC 1 cut(s) 136
BstMBI GATC 1 cut(s) 133
BstMWI GCNNNNNNNGC 1 cut(s) 194
BstV1I GCAGC 1 cut(s) 65
BstXI CCANNNNNNTGG 1 cut(s) 99
BsuRI GGCC 1 cut(s) 185
BtsCI GGATG 2 cut(s) 104, 214
Cac8I GCNNGC 1 cut(s) 93
Cfr13I GGNCC 1 cut(s) 17
CviAII CATG 1 cut(s) 181
CviJI RGCY 6 cut(s) 91, 95, 130, 185, 197, 257
CviKI_1 RGCY 6 cut(s) 91, 95, 130, 185, 197, 257
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
EaeI YGGCCR 1 cut(s) 183
Eco47I GGWCC 1 cut(s) 17
FaeI CATG 1 cut(s) 184
FaiI YATR 6 cut(s) 36, 60, 157, 176, 182, 265
FatI CATG 1 cut(s) 180
Fnu4HI GCNGC 2 cut(s) 54, 186
FokI GGATG 2 cut(s) 111, 201
Fsp4HI GCNGC 2 cut(s) 54, 186
FspBI CTAG 3 cut(s) 119, 131, 219
GluI GCNGC 2 cut(s) 54, 186
HaeIII GGCC 1 cut(s) 185
Hin1II CATG 1 cut(s) 184
HincII GTYRAC 1 cut(s) 83
HindII GTYRAC 1 cut(s) 83
Hpy166II GTNNAC 2 cut(s) 17, 83
Hpy188III TCNNGA 1 cut(s) 119
Hpy8I GTNNAC 2 cut(s) 17, 83
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4V TGCA 3 cut(s) 53, 180, 225
HpyF10VI GCNNNNNNNGC 1 cut(s) 194
Hsp92II CATG 1 cut(s) 184
Kzo9I GATC 1 cut(s) 133
LpnPI CCDG 5 cut(s) 57, 81, 99, 105, 124
Lsp1109I GCAGC 1 cut(s) 65
LweI GCATC 1 cut(s) 212
MaeI CTAG 3 cut(s) 119, 131, 219
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MluCI AATT 1 cut(s) 259
MnlI CCTC 1 cut(s) 30
MspA1I CMGCKG 1 cut(s) 95
MwoI GCNNNNNNNGC 1 cut(s) 194
NdeII GATC 1 cut(s) 133
NlaIII CATG 1 cut(s) 184
PkrI GCNGC 2 cut(s) 55, 187
PspPI GGNCC 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 95
SatI GCNGC 2 cut(s) 54, 186
Sau3AI GATC 1 cut(s) 133
Sau96I GGNCC 1 cut(s) 17
SetI ASST 4 cut(s) 22, 82, 97, 230
SfaNI GCATC 1 cut(s) 212
SinI GGWCC 1 cut(s) 17
Sse9I AATT 1 cut(s) 259
SsiI CCGC 1 cut(s) 186
SspMI CTAG 3 cut(s) 119, 131, 219
TaaI ACNGT 1 cut(s) 173
TasI AATT 1 cut(s) 259
TauI GCSGC 1 cut(s) 188
TseI GCWGC 1 cut(s) 53
TspDTI ATGAA 2 cut(s) 131, 197
VpaK11BI GGWCC 1 cut(s) 17
XbaI TCTAGA 1 cut(s) 118
XspI CTAG 3 cut(s) 119, 131, 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.