Prupe.1G360100_v2.0.a1

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
33227048 .. 33230862
3815 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G360100.1

Sequence Viewer

Length: 1605 bp
ATGGGGCTCTGCTTCACCAGATGTCGATCCCATGACATCCCAATCTCTTCCTCATCAGATTCACCTCCTCCCCACTACCAGCAAACATCCAATAAAACCCATGCCCAGCACAAGCCAACCCCTTCTTCAAAACCGAACCCGTATGCATCAGCTTATAATAATCCAGGCAATTCTTTTGGCAAGACCCCTTCGTCATCTCAGACTCAGATTGGACCCATTCTGGGCAGGCCATACGTGGACATAAACATCTTCTACACCCTTGAAAAGGAGCTGGGAAGGGGTCAGTTTGGTGTCACTCGTCTTTGCACAGAGAAGGCCACGGGCAAAAGGTACGCCTGCAAGTCCATATCAAGGCGAAAGCTCTCGACCAGCAAGGACATTGACGATGTCAGGAGGGAGATTATGATACTTCAGCATCTCACAGGGCAACCCAACATTGTGGAATTCAAGGGTGCTTATGAGGACAGGCAGAATCTGCATTTGGTCATGGAGTTGTGCTCCGGCGGTGAGCTTTTTGATCGGATTACTGCCAAAGGGAGCTACTCTGAGCGTCAAGCCGCTCAGATTTTCAGGCAGATTGTGAATGTGGTTCATGTGTGTCACTTCATGGGGGTGATGCATAGAGACCTCAAGCCTGAGAATTTCTTGCTGGTCAGTAAGGAAGAGAATGCCCCTCTTAAAGCCATCGATTTTGGACTCTCTGTCTTCATTGAGCAAGGGAAAGTGTACAGAGACATTGTTGGGAGTGCCTACTATGTGGCCCCGGAAGTGTTGGAGCGAAATTATGGGAAGGAGATAGATGTGTGGAGTGCTGGAGTCATTTTATATATTCTTCTAGCTGGAGCGCCTCCCTTTTGGGCTGAGACTGAAAGGGGGATATTTGAAGCAATTATGCAAGCCAAACTTGACTTGCAAAGTTCCCCATGGCCTTCTATCTCTGATTCTGCAAAGGATCTCATCAAGAAAATGTTAACAAGAGACGCTAAGAAAAGAATTACAGCTGCTGAAGTTCTTGAACATCCATGGATGACGAAAGATGGTGAAGCCTCTGACAAACCAATTGACAGTGCTGTTCTAATTAGGATGAAGCAGTTCAGAGCAATGAACAAGCTGAAGAAACTTGCTCTGATGGTAATAGCAGAAAACCTTTCAGAAGAAGAAATTCATGGCCTGAAACAAATGTTCAACAACATAGACACAGATGGAAGTGGCAGCATCACATTTGAAGAACTTAAAACTGGATTGACAAGGCTGGGATCTAAGCTTAGTGAAACAGAAATAAAACAGCTGATGGATGCTGCTGACATTGACAAGAATGGGACTATTGATTACACTGAATTCATCACTGCTACCATGCATCGCCATAAACTGGAGAAGGAAGAAAACTTGTACAAGGCTTTCCAGTTCTTTGACAAGGATCAGAGCGGGTTTATCACAAGAGATGAGCTAAGACAAGCAATGACTCAATATGGGATGGGGGATGATGCTACTATAGATGAAATCATTGATGATGTGGATACTGATAAAGATGGGAGAATCAACTACGAGGAGTTTGTGGCCATGATGAGACAGGGAGTTCAAGATTCTGAAGATAAACTAAGATAG

Protein Analysis

535

Amino Acids

60.38

Weight (kDa)

5.98

Isoelectric Point (pI)

44.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 156
AasI GACNNNNNNGTC 1 cut(s) 190
AccB7I CCANNNNNTGG 1 cut(s) 1369
AccBSI CCGCTC 2 cut(s) 560, 1425
AciI CCGC 3 cut(s) 504, 558, 1425
AclWI GGATC 4 cut(s) 21, 960, 1264, 1425
AcoI YGGCCR 1 cut(s) 1557
AcsI RAATTY 4 cut(s) 443, 640, 1161, 1337
AcuI CTGAAG 3 cut(s) 395, 1026, 1133
AfaI GTAC 3 cut(s) 332, 728, 1391
AfiI CCNNNNNNNGG 4 cut(s) 221, 265, 351, 1369
AgsI TTSAA 8 cut(s) 129, 263, 448, 884, 1016, 1186, 1226, 1580
AhdI GACNNNNNGTC 1 cut(s) 701
AjnI CCWGG 1 cut(s) 163
AjuI GAANNNNNNNTTGG 4 cut(s) 109, 141, 464, 496
Alw21I GWGCWC 1 cut(s) 500
Alw26I GTCTC 5 cut(s) 618, 726, 857, 972, 1561
AlwI GGATC 4 cut(s) 21, 960, 1264, 1425
AlwNI CAGNNNCTG 2 cut(s) 475, 1004
AoxI GGCC 6 cut(s) 227, 315, 759, 926, 1168, 1557
ApeKI GCWGC 3 cut(s) 1001, 1212, 1298
ApoI RAATTY 4 cut(s) 443, 640, 1161, 1337
Asp700I GAANNNNTTC 2 cut(s) 1091, 1161
AspLEI GCGC 1 cut(s) 847
AspS9I GGNCC 2 cut(s) 212, 760
AsuC2I CCSGG 1 cut(s) 764
AsuHPI GGTGA 5 cut(s) 7, 54, 518, 625, 1052
AvaII GGWCC 1 cut(s) 212
BalI TGGCCA 1 cut(s) 1559
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 697
Bbv12I GWGCWC 1 cut(s) 500
BbvI GCAGC 3 cut(s) 988, 1224, 1285
BccI CCATC 7 cut(s) 692, 1031, 1123, 1196, 1285, 1468, 1523
BciT130I CCWGG 1 cut(s) 165
BciVI GTATCC 1 cut(s) 1510
BcnI CCSGG 1 cut(s) 764
BcoDI GTCTC 5 cut(s) 618, 726, 857, 972, 1561
BfaI CTAG 1 cut(s) 836
BfmI CTRYAG 1 cut(s) 1491
BfoI RGCGCY 1 cut(s) 848
BfuI GTATCC 1 cut(s) 1510
BisI GCNGC 4 cut(s) 558, 1002, 1213, 1299
BlsI GCNGC 4 cut(s) 559, 1003, 1214, 1300
Bme1390I CCNGG 2 cut(s) 165, 764
Bme18I GGWCC 1 cut(s) 212
BmeRI GACNNNNNGTC 1 cut(s) 701
BmgT120I GGNCC 2 cut(s) 212, 760
BmiI GGNNCC 2 cut(s) 214, 762
BmrFI CCNGG 2 cut(s) 165, 764
BmsI GCATC 7 cut(s) 155, 424, 606, 1224, 1285, 1366, 1474
BpiI GAAGAC 1 cut(s) 697
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpmI CTGGAG 3 cut(s) 834, 861, 1391
BpuEI CTTGAG 1 cut(s) 614
BpuMI CCSGG 1 cut(s) 764
Bsa29I ATCGAT 1 cut(s) 687
BsaAI YACGTR 1 cut(s) 235
BsaBI GATNNNNATC 1 cut(s) 25
BsaI GGTCTC 1 cut(s) 618
BsaJI CCNNGG 4 cut(s) 318, 762, 923, 1022
Bsc4I CCNNNNNNNGG 4 cut(s) 221, 265, 351, 1369
Bse1I ACTGG 3 cut(s) 1243, 1374, 1402
Bse3DI GCAATG 2 cut(s) 1107, 1464
Bse8I GATNNNNATC 1 cut(s) 25
BseBI CCWGG 1 cut(s) 165
BseCI ATCGAT 1 cut(s) 687
BseDI CCNNGG 4 cut(s) 318, 762, 923, 1022
BseGI GGATG 8 cut(s) 36, 86, 1018, 1032, 1089, 1300, 1479, 1486
BseJI GATNNNNATC 1 cut(s) 25
BseLI CCNNNNNNNGG 4 cut(s) 221, 265, 351, 1369
BseMI GCAATG 2 cut(s) 1107, 1464
BseMII CTCAG 6 cut(s) 212, 218, 537, 575, 627, 852
BseNI ACTGG 3 cut(s) 1243, 1374, 1402
BseRI GAGGAG 2 cut(s) 57, 1562
BseXI GCAGC 3 cut(s) 988, 1224, 1285
BseYI CCCAGC 3 cut(s) 105, 271, 1252
BshFI GGCC 6 cut(s) 229, 317, 761, 928, 1170, 1559
BshVI ATCGAT 1 cut(s) 687
BsiHKAI GWGCWC 1 cut(s) 500
BsiSI CCGG 2 cut(s) 501, 764
BslFI GGGAC 1 cut(s) 1333
BslI CCNNNNNNNGG 4 cut(s) 221, 265, 351, 1369
BsmAI GTCTC 5 cut(s) 618, 726, 857, 972, 1561
BsmBI CGTCTC 1 cut(s) 972
BsmFI GGGAC 1 cut(s) 1333
BsmI GAATGC 1 cut(s) 673
BsnI GGCC 6 cut(s) 229, 317, 761, 928, 1170, 1559
Bso31I GGTCTC 1 cut(s) 618
Bsp1286I GDGCHC 2 cut(s) 9, 500
Bsp1407I TGTACA 2 cut(s) 726, 1389
Bsp143I GATC 5 cut(s) 26, 517, 952, 1256, 1417
Bsp19I CCATGG 2 cut(s) 923, 1022
BspACI CCGC 3 cut(s) 504, 558, 1425
BspANI GGCC 6 cut(s) 229, 317, 761, 928, 1170, 1559
BspCNI CTCAG 6 cut(s) 211, 217, 538, 574, 628, 853
BspDI ATCGAT 1 cut(s) 687
BspLI GGNNCC 2 cut(s) 214, 762
BspPI GGATC 4 cut(s) 21, 960, 1264, 1425
BspTNI GGTCTC 1 cut(s) 618
BsrBI CCGCTC 2 cut(s) 560, 1425
BsrDI GCAATG 2 cut(s) 1107, 1464
BsrGI TGTACA 2 cut(s) 726, 1389
BsrI ACTGG 3 cut(s) 1243, 1374, 1402
BssECI CCNNGG 4 cut(s) 318, 762, 923, 1022
BssMI GATC 5 cut(s) 26, 517, 952, 1256, 1417
BssT1I CCWWGG 2 cut(s) 923, 1022
Bst2UI CCWGG 1 cut(s) 165
Bst4CI ACNGT 1 cut(s) 1067
Bst6I CTCTTC 2 cut(s) 52, 657
BstAPI GCANNNNNTGC 1 cut(s) 475
BstAUI TGTACA 2 cut(s) 726, 1389
BstBAI YACGTR 1 cut(s) 235
BstC8I GCNNGC 3 cut(s) 227, 337, 897
BstDSI CCRYGG 3 cut(s) 318, 923, 1022
BstENI CCTNNNNNAGG 1 cut(s) 263
BstF5I GGATG 8 cut(s) 36, 86, 1018, 1032, 1089, 1300, 1479, 1486
BstH2I RGCGCY 1 cut(s) 848
BstHHI GCGC 1 cut(s) 847
BstKTI GATC 5 cut(s) 29, 520, 955, 1259, 1420
BstMAI GTCTC 5 cut(s) 618, 726, 857, 972, 1561
BstMBI GATC 5 cut(s) 26, 517, 952, 1256, 1417
BstMWI GCNNNNNNNGC 1 cut(s) 475
BstNI CCWGG 1 cut(s) 165
BstSCI CCNGG 2 cut(s) 163, 762
BstSFI CTRYAG 1 cut(s) 1491
BstV1I GCAGC 3 cut(s) 988, 1224, 1285
BstV2I GAAGAC 1 cut(s) 697
BstX2I RGATCY 2 cut(s) 952, 1256
BstXI CCANNNNNNTGG 1 cut(s) 439
BstYI RGATCY 2 cut(s) 952, 1256
Bsu15I ATCGAT 1 cut(s) 687
BsuI GTATCC 1 cut(s) 1510
BsuRI GGCC 6 cut(s) 229, 317, 761, 928, 1170, 1559
BsuTUI ATCGAT 1 cut(s) 687
BtgI CCRYGG 3 cut(s) 318, 923, 1022
BtgZI GCGATG 1 cut(s) 1343
BtsCI GGATG 8 cut(s) 36, 86, 1018, 1032, 1089, 1300, 1479, 1486
BtsI GCAGTG 1 cut(s) 1344
BtsIMutI CAGTG 3 cut(s) 1072, 1332, 1344
Cac8I GCNNGC 3 cut(s) 227, 337, 897
CaiI CAGNNNCTG 2 cut(s) 475, 1004
CfoI GCGC 1 cut(s) 847
Cfr13I GGNCC 2 cut(s) 212, 760
ClaI ATCGAT 1 cut(s) 687
CseI GACGC 2 cut(s) 539, 989
Csp6I GTAC 3 cut(s) 331, 727, 1390
CviQI GTAC 3 cut(s) 331, 727, 1390
DpnI GATC 5 cut(s) 28, 519, 954, 1258, 1419
DpnII GATC 5 cut(s) 26, 517, 952, 1256, 1417
DrdI GACNNNNNNGTC 1 cut(s) 190
DriI GACNNNNNGTC 1 cut(s) 701
DseDI GACNNNNNNGTC 1 cut(s) 190
EaeI YGGCCR 1 cut(s) 1557
Eam1104I CTCTTC 2 cut(s) 52, 657
Eam1105I GACNNNNNGTC 1 cut(s) 701
EarI CTCTTC 2 cut(s) 52, 657
Eco130I CCWWGG 2 cut(s) 923, 1022
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 1 cut(s) 618
Eco47I GGWCC 1 cut(s) 212
Eco57I CTGAAG 3 cut(s) 395, 1026, 1133
EcoNI CCTNNNNNAGG 1 cut(s) 263
EcoRI GAATTC 2 cut(s) 443, 1337
EcoRII CCWGG 1 cut(s) 163
EcoT14I CCWWGG 2 cut(s) 923, 1022
EcoT22I ATGCAT 3 cut(s) 148, 621, 1359
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 2 cut(s) 923, 1022
Esp3I CGTCTC 1 cut(s) 972
FalI AAGNNNNNCTT 2 cut(s) 888, 920
FaqI GGGAC 1 cut(s) 1333
FauI CCCGC 1 cut(s) 1418
Fnu4HI GCNGC 4 cut(s) 558, 1002, 1213, 1299
FokI GGATG 8 cut(s) 23, 73, 1005, 1039, 1096, 1307, 1486, 1493
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 4 cut(s) 558, 1002, 1213, 1299
FspBI CTAG 1 cut(s) 836
GlaI GCGC 1 cut(s) 846
GluI GCNGC 4 cut(s) 558, 1002, 1213, 1299
GsaI CCCAGC 3 cut(s) 109, 275, 1256
GsuI CTGGAG 3 cut(s) 834, 861, 1391
HaeII RGCGCY 1 cut(s) 848
HaeIII GGCC 6 cut(s) 229, 317, 761, 928, 1170, 1559
HapII CCGG 2 cut(s) 501, 764
HgaI GACGC 2 cut(s) 539, 989
HhaI GCGC 1 cut(s) 847
Hin6I GCGC 1 cut(s) 845
HinP1I GCGC 1 cut(s) 845
HincII GTYRAC 1 cut(s) 972
HindII GTYRAC 1 cut(s) 972
HindIII AAGCTT 1 cut(s) 1262
HinfI GANTC 9 cut(s) 59, 202, 472, 696, 816, 941, 1462, 1536, 1583
HpaI GTTAAC 1 cut(s) 972
HpaII CCGG 2 cut(s) 501, 764
HphI GGTGA 5 cut(s) 7, 54, 518, 625, 1052
Hpy166II GTNNAC 3 cut(s) 238, 727, 972
Hpy188III TCNNGA 5 cut(s) 364, 391, 961, 1013, 1580
Hpy8I GTNNAC 3 cut(s) 238, 727, 972
HpyAV CCTTC 7 cut(s) 132, 198, 270, 307, 784, 939, 1369
HpyCH4III ACNGT 1 cut(s) 1067
HpyCH4IV ACGT 1 cut(s) 234
HpyCH4V TGCA 9 cut(s) 146, 306, 339, 478, 619, 895, 913, 947, 1357
HpyF10VI GCNNNNNNNGC 1 cut(s) 475
HpySE526I ACGT 1 cut(s) 234
HspAI GCGC 1 cut(s) 845
KspAI GTTAAC 1 cut(s) 972
Kzo9I GATC 5 cut(s) 26, 517, 952, 1256, 1417
LmnI GCTCC 5 cut(s) 268, 503, 537, 775, 842
Lsp1109I GCAGC 3 cut(s) 988, 1224, 1285
LweI GCATC 7 cut(s) 155, 424, 606, 1224, 1285, 1366, 1474
MaeI CTAG 1 cut(s) 836
MaeII ACGT 1 cut(s) 234
MaeIII GTNAC 2 cut(s) 292, 599
MalI GATC 5 cut(s) 28, 519, 954, 1258, 1419
MbiI CCGCTC 2 cut(s) 560, 1425
MboI GATC 5 cut(s) 26, 517, 952, 1256, 1417
MfeI CAATTG 1 cut(s) 1059
MflI RGATCY 2 cut(s) 952, 1256
MhlI GDGCHC 2 cut(s) 9, 500
MlsI TGGCCA 1 cut(s) 1559
MluNI TGGCCA 1 cut(s) 1559
MlyI GAGTC 4 cut(s) 196, 690, 825, 1456
MmeI TCCRAC 1 cut(s) 753
Mox20I TGGCCA 1 cut(s) 1559
Mph1103I ATGCAT 3 cut(s) 148, 621, 1359
MroXI GAANNNNTTC 2 cut(s) 1091, 1161
MscI TGGCCA 1 cut(s) 1559
MseI TTAA 3 cut(s) 678, 971, 1233
MslI CAYNNNNRTG 1 cut(s) 611
Msp20I TGGCCA 1 cut(s) 1559
MspA1I CMGCKG 2 cut(s) 1001, 1288
MspI CCGG 2 cut(s) 501, 764
MspR9I CCNGG 2 cut(s) 165, 764
MunI CAATTG 1 cut(s) 1059
Mva1269I GAATGC 1 cut(s) 673
MvaI CCWGG 1 cut(s) 165
MwoI GCNNNNNNNGC 1 cut(s) 475
NciI CCSGG 1 cut(s) 764
NcoI CCATGG 2 cut(s) 923, 1022
NdeII GATC 5 cut(s) 26, 517, 952, 1256, 1417
NlaIV GGNNCC 2 cut(s) 214, 762
NmuCI GTSAC 2 cut(s) 292, 599
NsiI ATGCAT 3 cut(s) 148, 621, 1359
PctI GAATGC 1 cut(s) 673
PdmI GAANNNNTTC 2 cut(s) 1091, 1161
PfeI GAWTC 5 cut(s) 59, 472, 941, 1536, 1583
PflFI GACNNNGTC 1 cut(s) 386
PflMI CCANNNNNTGG 1 cut(s) 1369
PkrI GCNGC 4 cut(s) 559, 1003, 1214, 1300
PleI GAGTC 4 cut(s) 196, 690, 824, 1456
PpsI GAGTC 4 cut(s) 196, 690, 824, 1456
Ppu21I YACGTR 1 cut(s) 235
PsiI TTATAA 1 cut(s) 156
Psp6I CCWGG 1 cut(s) 163
PspFI CCCAGC 3 cut(s) 105, 271, 1252
PspGI CCWGG 1 cut(s) 163
PspN4I GGNNCC 2 cut(s) 214, 762
PspPI GGNCC 2 cut(s) 212, 760
PstNI CAGNNNCTG 2 cut(s) 475, 1004
PsuI RGATCY 2 cut(s) 952, 1256
PsyI GACNNNGTC 1 cut(s) 386
PvuII CAGCTG 2 cut(s) 1001, 1288
RsaI GTAC 3 cut(s) 332, 728, 1391
RsaNI GTAC 3 cut(s) 331, 727, 1390
RseI CAYNNNNRTG 1 cut(s) 611
SaqAI TTAA 3 cut(s) 678, 971, 1233
SatI GCNGC 4 cut(s) 558, 1002, 1213, 1299
Sau3AI GATC 5 cut(s) 26, 517, 952, 1256, 1417
Sau96I GGNCC 2 cut(s) 212, 760
SchI GAGTC 4 cut(s) 196, 690, 825, 1456
ScrFI CCNGG 2 cut(s) 165, 764
SduI GDGCHC 2 cut(s) 9, 500
SfaNI GCATC 7 cut(s) 155, 424, 606, 1224, 1285, 1366, 1474
SfcI CTRYAG 1 cut(s) 1491
SinI GGWCC 1 cut(s) 212
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 1 cut(s) 629
SmoI CTYRAG 1 cut(s) 629
SsiI CCGC 3 cut(s) 504, 558, 1425
SspMI CTAG 1 cut(s) 836
StyD4I CCNGG 2 cut(s) 163, 762
StyI CCWWGG 2 cut(s) 923, 1022
TaaI ACNGT 1 cut(s) 1067
TaiI ACGT 1 cut(s) 237
TaqI TCGA 3 cut(s) 25, 365, 687
TatI WGTACW 2 cut(s) 726, 1389
TauI GCSGC 1 cut(s) 560
TfiI GAWTC 5 cut(s) 59, 472, 941, 1536, 1583
Tru1I TTAA 3 cut(s) 678, 971, 1233
Tru9I TTAA 3 cut(s) 678, 971, 1233
TscAI CASTG 3 cut(s) 1072, 1339, 1351
TseFI GTSAC 2 cut(s) 292, 599
TseI GCWGC 3 cut(s) 1001, 1212, 1298
Tsp45I GTSAC 2 cut(s) 292, 599
TspDTI ATGAA 8 cut(s) 581, 595, 697, 1100, 1118, 1154, 1330, 1512
TspRI CASTG 3 cut(s) 1072, 1339, 1351
Tth111I GACNNNGTC 1 cut(s) 386
Van91I CCANNNNNTGG 1 cut(s) 1369
VpaK11BI GGWCC 1 cut(s) 212
XagI CCTNNNNNAGG 1 cut(s) 263
XapI RAATTY 4 cut(s) 443, 640, 1161, 1337
XmnI GAANNNNTTC 2 cut(s) 1091, 1161
XspI CTAG 1 cut(s) 836
Zsp2I ATGCAT 3 cut(s) 148, 621, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.