Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0008188

Physical Location & Seq

Genomic Coordinates Forward (+)

62105139 .. 62111656

Gene Structure 6518 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G037840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGGACTCTGTTTCACAAAATCCCACACCCATGATATCCCAATCTCTTCATCATCAGAATCACCACCTCACCACTTCCAACAAACACAACCCAAAAAAACCCGACCCGTTTCACCAGCCAGCTCAACCCAAACCCAGCCCTACTCCGGAGGCTCTTTCGGCAAGAGCCCCTCGTCCTCCCAAATCGGACCAATTCTGGGCAAGCCTTACGCCGACGTAAATTCCGTTTATACCCTCGAGAAGGAGCTGGGCCGCGGCCAGTTCGGCGTCACGCGTCTGTGCACCGAGAAATCCACAGGCCGAAAATACGCGTGCAAGTCCATATCGTGCAAAAAACTCGTGACGAATAAGGACATTGAGGAGTTGCGGAGAGAGGTTCTGATTCTGGAGCACTTAACGGGCCAGCCCAATATAGTTGAATTCAAAGGTGCTTTTGAGGACCGCCAGAATCTGCATTTGATTATGGAGCTCTGCACCGGCGGCGAGCTTTTTGATCGGATTATTGCCAAGGGAAGCTACACCGAGCGTGAAGCGGCCGAGATTTTCCGGCAGATTGTGAATGTGGTGCATGTGTGTCACTTTATGGGAGTGATGCATAGGGATTTGAAGCCTGAGAATTTCTTGCTTGTAAGTAAGGATGTGGATGCACCGATAAAGGCCATTGATTTTGGTCTCTCTGTCTTCATCGAGCAAGGCAAAGTTTACAGGGACATTGTTGGGAGTGCCTACTATGTGGCGCCAGAAGTGTTGCGGCGGAATTATGGGAAAGAGATAGATGTTTGGAGTGCTGGAGTCATCTTGTATATTCTTCTAAGTGGAGTACCTCCATTTTGGGCGGAGACCGAGAAAGGGATATTTGACTCAATTATAGAAGGAAAACTTGACTTGCATAGTGCGCCATGGCCTTCTATATCTGATGCGGCAAAGGATCTCATCAGGAAAATGTTAACAATGGACCCTCAGAAAAGGATTACAGCTGCTGAAGTTCTTGAGCATCAATGGATGAAGAAAGATGGTGAAGCATCTGACAAACCTATTGATAGTGCTGTGCTGATTAGGATGAAACAGTTCAGAGCAATGAACAAGTTGAAGAAACTTGCTCTAAAGGTCATAGCAGAAACACTTTCTGAAGAAGAGATTCATGGCCTGAAACAAATGTTCAACAACATTGACACGGATGGTAGTGGTAATATCACAGTTGAAGAACTAAGAACTGGATTGTCAAGGCTGGGATCTAAGCTTACAGAAGCAGAAATAAAGCAGCTGATGGATGCTGCTGACATAGACAAGAATGGGACTATTGATTACACTGAATTCATTACTGCAACCATGCATCGACACAAACTGGAGAAGGAAGAAAACTTGCACAAGGCTTTCCTTTACTTTGACAAGGATCAGAGCGGGTTTATCACAAGAGATGAGCTAAGACAAGCAATGACTGAATATGGGATGGGGGATGAGGCTACGATAGATGAAGTCCTTGAAGATGTGGATACTGATAAAGATGGGAGAATCAATTATGAGGAGTTCGTAGCCATGATGACACGGGGAGTTGCAGATTACGATGATAAACCAGATAGGGTGATTGTTCTACCTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0047484 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901000 GO:1901002 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

533

Amino Acids

60.02

Weight (kDa)

5.58

Isoelectric Point (pI)

43.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	77 - 335	5.4e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	78 - 331	4.1e-27	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	383 - 443	1e-14	EF-hand domain pair
EF-hand_1	PF00036	383 - 409	5.2e-06	EF hand domain
EF-hand_6	PF13405	383 - 411	9.9e-06	EF-hand domain
EF-hand_5	PF13202	383 - 405	7.9e-06	EF hand
EF-hand_8	PF13833	395 - 442	2.4e-07	EF-hand domain pair
EF-hand_7	PF13499	452 - 515	3.5e-16	EF-hand domain pair
EF-hand_1	PF00036	455 - 481	1.2e-06	EF hand domain
EF-hand_6	PF13405	455 - 483	3.2e-07	EF-hand domain
EF-hand_8	PF13833	467 - 516	4.7e-06	EF-hand domain pair
EF-hand_1	PF00036	490 - 516	2.1e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76040 AT1G76040 AT1G76040 AT1G76040
fragaria_vesca	FvH4_2g38010 FvH4_2g38010
malus_domestica	MD15G1007200.v1.1
prunus_persica	Prupe.1G360100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0303601
rosa_laevigata	RLG00000011069 RLG00000011734
rosa_multiflora	Rmu_ssc0000114.1_g000023
rosa_roxburghii	Rroxscaffold_7G00164590
rosa_rugosa	Rorug06G0257300 Rorug06G0322800
rosa_samantha	Rh6AG437100 Rh6BG377600 Rh6BG377700 Rh6BG466100 Rh6CG449200 Rh6DG370300 Rh6DG435900
rosa_wichuraiana	Rw6G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	736
AccBSI	CCGCTC	1 cut(s)	1401
AccII	CGCG	3 cut(s)	255, 274, 311
AccIII	TCCGGA	1 cut(s)	146
AclWI	GGATC	3 cut(s)	936, 1240, 1401
AcoI	YGGCCR	2 cut(s)	256, 534
AcsI	RAATTY	4 cut(s)	220, 419, 616, 1313
AcuI	CTGAAG	2 cut(s)	1002, 1149
AcyI	GRCGYC	2 cut(s)	267, 737
AfaI	GTAC	1 cut(s)	822
AfiI	CCNNNNNNNGG	4 cut(s)	146, 197, 241, 849
AflIII	ACRYGT	2 cut(s)	272, 309
AgsI	TTSAA	7 cut(s)	419, 424, 607, 1090, 1162, 1202, 1484
AluBI	AGCT	9 cut(s)	123, 247, 469, 487, 516, 977, 1240, 1264, 1423
AluI	AGCT	9 cut(s)	123, 247, 469, 487, 516, 977, 1240, 1264, 1423
Alw21I	GWGCWC	3 cut(s)	284, 393, 471
Alw26I	GTCTC	2 cut(s)	677, 833
Alw44I	GTGCAC	1 cut(s)	280
AlwI	GGATC	3 cut(s)	936, 1240, 1401
AlwNI	CAGNNNCTG	2 cut(s)	451, 980
Ama87I	CYCGRG	1 cut(s)	236
Aor13HI	TCCGGA	1 cut(s)	146
AoxI	GGCC	8 cut(s)	250, 256, 298, 400, 534, 657, 902, 1144
ApaLI	GTGCAC	1 cut(s)	280
ApeKI	GCWGC	3 cut(s)	977, 1261, 1274
ApoI	RAATTY	4 cut(s)	220, 419, 616, 1313
Asp700I	GAANNNNTTC	2 cut(s)	1067, 1137
AspLEI	GCGC	2 cut(s)	739, 898
AspS9I	GGNCC	5 cut(s)	188, 250, 400, 439, 955
AsuHPI	GGTGA	5 cut(s)	54, 62, 105, 1028, 1594
AvaI	CYCGRG	1 cut(s)	236
AvaII	GGWCC	3 cut(s)	188, 439, 955
BaeGI	GKGCMC	1 cut(s)	284
BanI	GGYRCC	1 cut(s)	736
BanII	GRGCYC	2 cut(s)	170, 471
BauI	CACGAG	1 cut(s)	338
BbsI	GAAGAC	1 cut(s)	673
Bbv12I	GWGCWC	3 cut(s)	284, 393, 471
BbvI	GCAGC	3 cut(s)	964, 1261, 1273
BccI	CCATC	5 cut(s)	1007, 1172, 1261, 1444, 1499
BcgI	CGANNNNNNTGC	2 cut(s)	319, 353
BciVI	GTATCC	1 cut(s)	1486
BcoDI	GTCTC	2 cut(s)	677, 833
BfoI	RGCGCY	1 cut(s)	740
BfuI	GTATCC	1 cut(s)	1486
BglI	GCCNNNNNGGC	1 cut(s)	264
BisI	GCNGC	9 cut(s)	253, 256, 481, 534, 752, 921, 978, 1262, 1275
BlsI	GCNGC	9 cut(s)	254, 257, 482, 535, 753, 922, 979, 1263, 1276
Bme18I	GGWCC	3 cut(s)	188, 439, 955
BmeT110I	CYCGRG	1 cut(s)	236
BmgT120I	GGNCC	5 cut(s)	188, 250, 400, 439, 955
BmiI	GGNNCC	2 cut(s)	738, 957
BmsI	GCATC	7 cut(s)	582, 634, 907, 1003, 1031, 1261, 1342
BpiI	GAAGAC	1 cut(s)	673
BpmI	CTGGAG	3 cut(s)	407, 810, 1367
BpuEI	CTTGAG	1 cut(s)	1010
BsaHI	GRCGYC	2 cut(s)	267, 737
BsaI	GGTCTC	2 cut(s)	677, 833
BsaJI	CCNNGG	3 cut(s)	253, 507, 899
BsaWI	WCCGGW	1 cut(s)	146
Bsc4I	CCNNNNNNNGG	4 cut(s)	146, 197, 241, 849
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	3 cut(s)	259, 1219, 1350
Bse3DI	GCAATG	2 cut(s)	1083, 1440
BseAI	TCCGGA	1 cut(s)	146
BseDI	CCNNGG	3 cut(s)	253, 507, 899
BseGI	GGATG	8 cut(s)	643, 649, 1008, 1065, 1183, 1276, 1455, 1462
BseLI	CCNNNNNNNGG	4 cut(s)	146, 197, 241, 849
BseMI	GCAATG	2 cut(s)	1083, 1440
BseMII	CTCAG	2 cut(s)	603, 974
BseNI	ACTGG	3 cut(s)	259, 1219, 1350
BseRI	GAGGAG	2 cut(s)	374, 1538
BseSI	GKGCMC	1 cut(s)	284
BseX3I	CGGCCG	1 cut(s)	534
BseXI	GCAGC	3 cut(s)	964, 1261, 1273
BseYI	CCCAGC	3 cut(s)	135, 247, 1228
BsgI	GTGCAG	1 cut(s)	457
Bsh1236I	CGCG	3 cut(s)	255, 274, 311
Bsh1285I	CGRYCG	1 cut(s)	537
BshFI	GGCC	8 cut(s)	252, 258, 300, 402, 536, 659, 904, 1146
BshNI	GGYRCC	1 cut(s)	736
BsiEI	CGRYCG	1 cut(s)	537
BsiHKAI	GWGCWC	3 cut(s)	284, 393, 471
BsiHKCI	CYCGRG	1 cut(s)	236
BsiSI	CCGG	3 cut(s)	147, 477, 547
BslFI	GGGAC	3 cut(s)	18, 722, 1309
BslI	CCNNNNNNNGG	4 cut(s)	146, 197, 241, 849
BsmAI	GTCTC	2 cut(s)	677, 833
BsmFI	GGGAC	3 cut(s)	18, 722, 1309
BsnI	GGCC	8 cut(s)	252, 258, 300, 402, 536, 659, 904, 1146
Bso31I	GGTCTC	2 cut(s)	677, 833
BsoBI	CYCGRG	1 cut(s)	236
Bsp1286I	GDGCHC	4 cut(s)	170, 284, 393, 471
Bsp13I	TCCGGA	1 cut(s)	146
Bsp143I	GATC	4 cut(s)	493, 928, 1232, 1393
Bsp19I	CCATGG	1 cut(s)	899
BspANI	GGCC	8 cut(s)	252, 258, 300, 402, 536, 659, 904, 1146
BspCNI	CTCAG	2 cut(s)	604, 973
BspEI	TCCGGA	1 cut(s)	146
BspFNI	CGCG	3 cut(s)	255, 274, 311
BspLI	GGNNCC	2 cut(s)	738, 957
BspPI	GGATC	3 cut(s)	936, 1240, 1401
BspT107I	GGYRCC	1 cut(s)	736
BspTNI	GGTCTC	2 cut(s)	677, 833
BsrBI	CCGCTC	1 cut(s)	1401
BsrDI	GCAATG	2 cut(s)	1083, 1440
BsrFI	RCCGGY	1 cut(s)	476
BsrI	ACTGG	3 cut(s)	259, 1219, 1350
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	3 cut(s)	253, 507, 899
BssMI	GATC	4 cut(s)	493, 928, 1232, 1393
BssNI	GRCGYC	2 cut(s)	267, 737
BssSI	CACGAG	1 cut(s)	338
BssT1I	CCWWGG	2 cut(s)	507, 899
Bst2BI	CACGAG	1 cut(s)	338
Bst4CI	ACNGT	2 cut(s)	1068, 1198
Bst6I	CTCTTC	2 cut(s)	52, 1128
BstACI	GRCGYC	2 cut(s)	267, 737
BstC8I	GCNNGC	5 cut(s)	121, 203, 313, 404, 485
BstDEI	CTNAG	6 cut(s)	612, 812, 960, 1208, 1236, 1424
BstDSI	CCRYGG	2 cut(s)	253, 899
BstENI	CCTNNNNNAGG	1 cut(s)	239
BstF5I	GGATG	8 cut(s)	643, 649, 1008, 1065, 1183, 1276, 1455, 1462
BstFNI	CGCG	3 cut(s)	255, 274, 311
BstH2I	RGCGCY	1 cut(s)	740
BstHHI	GCGC	2 cut(s)	739, 898
BstKTI	GATC	4 cut(s)	496, 931, 1235, 1396
BstMAI	GTCTC	2 cut(s)	677, 833
BstMBI	GATC	4 cut(s)	493, 928, 1232, 1393
BstMCI	CGRYCG	1 cut(s)	537
BstMWI	GCNNNNNNNGC	4 cut(s)	159, 264, 480, 895
BstNSI	RCATGY	1 cut(s)	572
BstSLI	GKGCMC	1 cut(s)	284
BstUI	CGCG	3 cut(s)	255, 274, 311
BstV1I	GCAGC	3 cut(s)	964, 1261, 1273
BstV2I	GAAGAC	1 cut(s)	673
BstX2I	RGATCY	2 cut(s)	928, 1232
BstYI	RGATCY	2 cut(s)	928, 1232
BstZI	CGGCCG	1 cut(s)	534
BsuI	GTATCC	1 cut(s)	1486
BsuRI	GGCC	8 cut(s)	252, 258, 300, 402, 536, 659, 904, 1146
BtgI	CCRYGG	2 cut(s)	253, 899
BtsCI	GGATG	8 cut(s)	643, 649, 1008, 1065, 1183, 1276, 1455, 1462
BtsIMutI	CAGTG	1 cut(s)	1308
Cac8I	GCNNGC	5 cut(s)	121, 203, 313, 404, 485
CaiI	CAGNNNCTG	2 cut(s)	451, 980
CfoI	GCGC	2 cut(s)	739, 898
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	5 cut(s)	188, 250, 400, 439, 955
Cfr42I	CCGCGG	1 cut(s)	256
CseI	GACGC	2 cut(s)	256, 263
Csp6I	GTAC	1 cut(s)	821
CviAII	CATG	6 cut(s)	32, 569, 900, 1142, 1330, 1537
CviQI	GTAC	1 cut(s)	821
DdeI	CTNAG	6 cut(s)	612, 812, 960, 1208, 1236, 1424
DinI	GGCGCC	1 cut(s)	738
DpnI	GATC	4 cut(s)	495, 930, 1234, 1395
DpnII	GATC	4 cut(s)	493, 928, 1232, 1393
EaeI	YGGCCR	2 cut(s)	256, 534
EagI	CGGCCG	1 cut(s)	534
Eam1104I	CTCTTC	2 cut(s)	52, 1128
EarI	CTCTTC	2 cut(s)	52, 1128
EciI	GGCGGA	2 cut(s)	769, 851
Ecl136II	GAGCTC	1 cut(s)	469
EclXI	CGGCCG	1 cut(s)	534
Eco130I	CCWWGG	2 cut(s)	507, 899
Eco24I	GRGCYC	2 cut(s)	170, 471
Eco31I	GGTCTC	2 cut(s)	677, 833
Eco32I	GATATC	1 cut(s)	37
Eco47I	GGWCC	3 cut(s)	188, 439, 955
Eco52I	CGGCCG	1 cut(s)	534
Eco53kI	GAGCTC	1 cut(s)	469
Eco57I	CTGAAG	2 cut(s)	1002, 1149
Eco88I	CYCGRG	1 cut(s)	236
EcoICRI	GAGCTC	1 cut(s)	469
EcoNI	CCTNNNNNAGG	1 cut(s)	239
EcoRI	GAATTC	2 cut(s)	419, 1313
EcoRV	GATATC	1 cut(s)	37
EcoT14I	CCWWGG	2 cut(s)	507, 899
EcoT22I	ATGCAT	2 cut(s)	597, 1335
EcoT38I	GRGCYC	2 cut(s)	170, 471
EgeI	GGCGCC	1 cut(s)	738
EheI	GGCGCC	1 cut(s)	738
ErhI	CCWWGG	2 cut(s)	507, 899
FaeI	CATG	6 cut(s)	35, 572, 903, 1145, 1333, 1540
FalI	AAGNNNNNCTT	2 cut(s)	864, 896
FaqI	GGGAC	3 cut(s)	18, 722, 1309
FatI	CATG	6 cut(s)	31, 568, 899, 1141, 1329, 1536
FauI	CCCGC	1 cut(s)	1394
Fnu4HI	GCNGC	9 cut(s)	253, 256, 481, 534, 752, 921, 978, 1262, 1275
FokI	GGATG	8 cut(s)	650, 656, 1015, 1072, 1190, 1283, 1462, 1469
FriOI	GRGCYC	2 cut(s)	170, 471
Fsp4HI	GCNGC	9 cut(s)	253, 256, 481, 534, 752, 921, 978, 1262, 1275
GlaI	GCGC	2 cut(s)	738, 897
GluI	GCNGC	9 cut(s)	253, 256, 481, 534, 752, 921, 978, 1262, 1275
GsaI	CCCAGC	3 cut(s)	139, 251, 1232
GsuI	CTGGAG	3 cut(s)	407, 810, 1367
HaeII	RGCGCY	1 cut(s)	740
HaeIII	GGCC	8 cut(s)	252, 258, 300, 402, 536, 659, 904, 1146
HapII	CCGG	3 cut(s)	147, 477, 547
HgaI	GACGC	2 cut(s)	256, 263
HhaI	GCGC	2 cut(s)	739, 898
Hin1I	GRCGYC	2 cut(s)	267, 737
Hin1II	CATG	6 cut(s)	35, 572, 903, 1145, 1333, 1540
Hin6I	GCGC	2 cut(s)	737, 896
HinP1I	GCGC	2 cut(s)	737, 896
HincII	GTYRAC	1 cut(s)	948
HindII	GTYRAC	1 cut(s)	948
HindIII	AAGCTT	1 cut(s)	1238
HinfI	GANTC	8 cut(s)	6, 59, 382, 448, 792, 860, 1138, 1512
HpaI	GTTAAC	1 cut(s)	948
HpaII	CCGG	3 cut(s)	147, 477, 547
HphI	GGTGA	5 cut(s)	54, 62, 105, 1028, 1594
Hpy166II	GTNNAC	3 cut(s)	282, 703, 948
Hpy188III	TCNNGA	6 cut(s)	147, 238, 340, 386, 937, 989
Hpy8I	GTNNAC	3 cut(s)	282, 703, 948
Hpy99I	CGWCG	1 cut(s)	218
HpyAV	CCTTC	4 cut(s)	235, 866, 915, 1345
HpyCH4III	ACNGT	2 cut(s)	1068, 1198
HpyCH4IV	ACGT	1 cut(s)	216
HpyF10VI	GCNNNNNNNGC	4 cut(s)	159, 264, 480, 895
HpyF3I	CTNAG	6 cut(s)	612, 812, 960, 1208, 1236, 1424
HpySE526I	ACGT	1 cut(s)	216
Hsp92I	GRCGYC	2 cut(s)	267, 737
Hsp92II	CATG	6 cut(s)	35, 572, 903, 1145, 1333, 1540
HspAI	GCGC	2 cut(s)	737, 896
KasI	GGCGCC	1 cut(s)	736
Kpn2I	TCCGGA	1 cut(s)	146
KspAI	GTTAAC	1 cut(s)	948
KspI	CCGCGG	1 cut(s)	256
Kzo9I	GATC	4 cut(s)	493, 928, 1232, 1393
LmnI	GCTCC	3 cut(s)	244, 388, 466
Lsp1109I	GCAGC	3 cut(s)	964, 1261, 1273
LweI	GCATC	7 cut(s)	582, 634, 907, 1003, 1031, 1261, 1342
MaeII	ACGT	1 cut(s)	216
MaeIII	GTNAC	3 cut(s)	268, 340, 575
MalI	GATC	4 cut(s)	495, 930, 1234, 1395
MbiI	CCGCTC	1 cut(s)	1401
MboI	GATC	4 cut(s)	493, 928, 1232, 1393
MflI	RGATCY	2 cut(s)	928, 1232
MhlI	GDGCHC	4 cut(s)	170, 284, 393, 471
MluCI	AATT	8 cut(s)	192, 220, 419, 616, 757, 864, 1313, 1516
MluI	ACGCGT	2 cut(s)	272, 309
Mly113I	GGCGCC	1 cut(s)	737
MlyI	GAGTC	2 cut(s)	801, 854
MmeI	TCCRAC	1 cut(s)	103
Mph1103I	ATGCAT	2 cut(s)	597, 1335
MroI	TCCGGA	1 cut(s)	146
MroXI	GAANNNNTTC	2 cut(s)	1067, 1137
MseI	TTAA	2 cut(s)	395, 947
MslI	CAYNNNNRTG	1 cut(s)	30
MspA1I	CMGCKG	3 cut(s)	255, 977, 1264
MspI	CCGG	3 cut(s)	147, 477, 547
MvnI	CGCG	3 cut(s)	255, 274, 311
MwoI	GCNNNNNNNGC	4 cut(s)	159, 264, 480, 895
NarI	GGCGCC	1 cut(s)	737
NcoI	CCATGG	1 cut(s)	899
NdeII	GATC	4 cut(s)	493, 928, 1232, 1393
NlaIII	CATG	6 cut(s)	35, 572, 903, 1145, 1333, 1540
NlaIV	GGNNCC	2 cut(s)	738, 957
NmeAIII	GCCGAG	1 cut(s)	562
NmuCI	GTSAC	3 cut(s)	268, 340, 575
NsiI	ATGCAT	2 cut(s)	597, 1335
NspI	RCATGY	1 cut(s)	572
PaeR7I	CTCGAG	1 cut(s)	236
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PdmI	GAANNNNTTC	2 cut(s)	1067, 1137
PfeI	GAWTC	5 cut(s)	59, 382, 448, 1138, 1512
PkrI	GCNGC	9 cut(s)	254, 257, 482, 535, 753, 922, 979, 1263, 1276
PleI	GAGTC	2 cut(s)	800, 854
PluTI	GGCGCC	1 cut(s)	740
PpsI	GAGTC	2 cut(s)	800, 854
Psp124BI	GAGCTC	1 cut(s)	471
PspFI	CCCAGC	3 cut(s)	135, 247, 1228
PspN4I	GGNNCC	2 cut(s)	738, 957
PspPI	GGNCC	5 cut(s)	188, 250, 400, 439, 955
PstNI	CAGNNNCTG	2 cut(s)	451, 980
PsuI	RGATCY	2 cut(s)	928, 1232
PvuII	CAGCTG	2 cut(s)	977, 1264
RsaI	GTAC	1 cut(s)	822
RsaNI	GTAC	1 cut(s)	821
RseI	CAYNNNNRTG	1 cut(s)	30
SacI	GAGCTC	1 cut(s)	471
SacII	CCGCGG	1 cut(s)	256
SaqAI	TTAA	2 cut(s)	395, 947
SatI	GCNGC	9 cut(s)	253, 256, 481, 534, 752, 921, 978, 1262, 1275
Sau3AI	GATC	4 cut(s)	493, 928, 1232, 1393
Sau96I	GGNCC	5 cut(s)	188, 250, 400, 439, 955
SchI	GAGTC	2 cut(s)	801, 854
SduI	GDGCHC	4 cut(s)	170, 284, 393, 471
SfaNI	GCATC	7 cut(s)	582, 634, 907, 1003, 1031, 1261, 1342
SfoI	GGCGCC	1 cut(s)	738
Sfr274I	CTCGAG	1 cut(s)	236
Sfr303I	CCGCGG	1 cut(s)	256
SgrAI	CRCCGGYG	1 cut(s)	476
SgrBI	CCGCGG	1 cut(s)	256
SinI	GGWCC	3 cut(s)	188, 439, 955
SlaI	CTCGAG	1 cut(s)	236
SmiMI	CAYNNNNRTG	1 cut(s)	30
SmlI	CTYRAG	2 cut(s)	236, 989
SmoI	CTYRAG	2 cut(s)	236, 989
Sse9I	AATT	8 cut(s)	192, 220, 419, 616, 757, 864, 1313, 1516
SspDI	GGCGCC	1 cut(s)	736
SstI	GAGCTC	1 cut(s)	471
StyI	CCWWGG	2 cut(s)	507, 899
TaaI	ACNGT	2 cut(s)	1068, 1198
TaiI	ACGT	1 cut(s)	219
TaqI	TCGA	3 cut(s)	237, 687, 1336
TaqII	GACCGA	1 cut(s)	857
TasI	AATT	8 cut(s)	192, 220, 419, 616, 757, 864, 1313, 1516
TauI	GCSGC	6 cut(s)	255, 258, 483, 536, 754, 923
TfiI	GAWTC	5 cut(s)	59, 382, 448, 1138, 1512
Tru1I	TTAA	2 cut(s)	395, 947
Tru9I	TTAA	2 cut(s)	395, 947
TscAI	CASTG	1 cut(s)	1315
TseFI	GTSAC	3 cut(s)	268, 340, 575
TseI	GCWGC	3 cut(s)	977, 1261, 1274
Tsp45I	GTSAC	3 cut(s)	268, 340, 575
TspDTI	ATGAA	8 cut(s)	39, 673, 1019, 1076, 1094, 1130, 1306, 1488
TspGWI	ACGGA	2 cut(s)	214, 1190
TspRI	CASTG	1 cut(s)	1315
VneI	GTGCAC	1 cut(s)	280
VpaK11BI	GGWCC	3 cut(s)	188, 439, 955
XagI	CCTNNNNNAGG	1 cut(s)	239
XapI	RAATTY	4 cut(s)	220, 419, 616, 1313
XceI	RCATGY	1 cut(s)	572
XhoI	CTCGAG	1 cut(s)	236
XmnI	GAANNNNTTC	2 cut(s)	1067, 1137
Zsp2I	ATGCAT	2 cut(s)	597, 1335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.