Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0008188

Physical Location & Seq

Genomic Coordinates Forward (+)

62710381 .. 62716773

Gene Structure 6393 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG449200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1116 bp

ATGGGACTCTGTTTCACAAAATCCCACACCCATGATATCCCAATCTCTTCATCACCAGAATCACCACCTCACCACTTCCAACAAACACAACCCAACAAAAAACCCGACCCGTTTCACCAGCCAGCTCTACCCAAACCCAGCCCCTACTCCGGAGGCTCTCTCGGCAAGAGCCCCTCGTCCTCCCAAATCGGACCAATTCTGGGCAAGCCTTACGCCGACGTAAATTCCGTTTATACCCTCGAGAAGGAGCTGGGCCGCGGCCAGTTCGGCGTCACGCGTCTGTGCACCGAGAAATCCACAGGCCGAAAATACGCGTGCAAGTCCATATCGTGCAAAAAACTCGTGACGAATAAGGACATTGAGGACTTGCGGAGAGAGGTTCTGATTCTGGAGCACTTAACGGGCCAGCCCAATATAGTTGAATTCAAAGGTGCTTTTGAGGACCGCCAGAATCTGCATTTGATCATGGAGCTCTGCACCGGCGGCGAGCTTTTTGATCGGATTATTGCCAAGGGAAGCTACACCGAGCGTGAAGCGGCCAAGATTTTCCGGCAGATTGTGAATGTGGTGCATGTGTGTCACTTTATGGGAGTGATGCATAGGGATTTGAAGCCTGAGAATTTCTTGCTTGTAAGTAAGGATGAGGATGCACCGATAAAGGCCATTGATTTTGGTCTCTCTGTCTTCATCGAGCAAGGCAAAGTTTACAGGGACATTGTTGGGAGTGCCTACTATGTGGCGCCAGAAGTGTTGCAGCGGAATTATGGGAAAGAGATAGATGTTTGGAGTGCTGGAGTCATCTTGTATATTCTTCTAAGTGGAGTACCTCCATTTTGGGCGGAGACCGAGAAAGGGATATTTGACTCAATTATAGAAGGAAAACTTGACTTGCATATTGCGCCATGGCCTTCTATATCTGATGCGGCAAAGGATCTCATCAGGAAAATGTTAACAATGGACCCTAAGAAAAGGATTACAGCTGCTGAAGTTCTTGAGCATCAATGGATGAAGAAAGATGGTGAAGCATCTGACAAACCTATTGATAGTGCTGTGCTGATTAGGATGAAACAGTTCAGAGCAATGAACAAGTTGAAGAAACTTGCTCTAAAGGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0047484 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901000 GO:1901002 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

371

Amino Acids

41.62

Weight (kDa)

8.8

Isoelectric Point (pI)

44.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	78 - 336	4.2e-78	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	79 - 332	6.1e-28	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76040 AT1G76040 AT1G76040 AT1G76040
fragaria_vesca	FvH4_2g38010 FvH4_2g38010
malus_domestica	MD15G1007200.v1.1
prunus_persica	Prupe.1G360100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0303601
rosa_laevigata	RLG00000011069 RLG00000011734
rosa_multiflora	Rmu_ssc0000114.1_g000023
rosa_roxburghii	Rroxscaffold_7G00164590
rosa_rugosa	Rorug06G0257300 Rorug06G0322800
rosa_samantha	Rh6AG437100 Rh6BG377600 Rh6BG377700 Rh6BG466100 Rh6CG449200 Rh6DG370300 Rh6DG435900
rosa_wichuraiana	Rw6G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	739
AccII	CGCG	3 cut(s)	258, 277, 314
AccIII	TCCGGA	1 cut(s)	149
AciI	CCGC	9 cut(s)	256, 258, 370, 445, 483, 536, 757, 839, 923
AclWI	GGATC	1 cut(s)	939
AcoI	YGGCCR	2 cut(s)	259, 537
AcsI	RAATTY	3 cut(s)	223, 422, 619
AcuI	CTGAAG	1 cut(s)	1005
AcyI	GRCGYC	2 cut(s)	270, 740
AfaI	GTAC	1 cut(s)	825
AfiI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
AflIII	ACRYGT	2 cut(s)	275, 312
AgsI	TTSAA	4 cut(s)	422, 427, 610, 1093
AluBI	AGCT	6 cut(s)	125, 250, 472, 490, 519, 980
AluI	AGCT	6 cut(s)	125, 250, 472, 490, 519, 980
Alw21I	GWGCWC	3 cut(s)	287, 396, 474
Alw26I	GTCTC	2 cut(s)	680, 836
Alw44I	GTGCAC	1 cut(s)	283
AlwI	GGATC	1 cut(s)	939
AlwNI	CAGNNNCTG	2 cut(s)	454, 983
Ama87I	CYCGRG	1 cut(s)	239
Aor13HI	TCCGGA	1 cut(s)	149
AoxI	GGCC	7 cut(s)	253, 259, 301, 403, 537, 660, 905
ApaLI	GTGCAC	1 cut(s)	283
ApeKI	GCWGC	2 cut(s)	754, 980
ApoI	RAATTY	3 cut(s)	223, 422, 619
Asp700I	GAANNNNTTC	1 cut(s)	1070
AspLEI	GCGC	2 cut(s)	742, 901
AspS9I	GGNCC	5 cut(s)	191, 253, 403, 442, 958
AsuHPI	GGTGA	5 cut(s)	45, 54, 62, 107, 1031
AvaI	CYCGRG	1 cut(s)	239
AvaII	GGWCC	3 cut(s)	191, 442, 958
BaeGI	GKGCMC	1 cut(s)	287
BanI	GGYRCC	1 cut(s)	739
BanII	GRGCYC	2 cut(s)	173, 474
BauI	CACGAG	1 cut(s)	341
BbsI	GAAGAC	1 cut(s)	676
Bbv12I	GWGCWC	3 cut(s)	287, 396, 474
BbvI	GCAGC	2 cut(s)	766, 967
BccI	CCATC	1 cut(s)	1010
BcgI	CGANNNNNNTGC	2 cut(s)	322, 356
BclI	TGATCA	1 cut(s)	462
BcoDI	GTCTC	2 cut(s)	680, 836
BfoI	RGCGCY	1 cut(s)	743
BglI	GCCNNNNNGGC	1 cut(s)	267
BisI	GCNGC	7 cut(s)	256, 259, 484, 537, 755, 924, 981
BlsI	GCNGC	7 cut(s)	257, 260, 485, 538, 756, 925, 982
Bme18I	GGWCC	3 cut(s)	191, 442, 958
BmeT110I	CYCGRG	1 cut(s)	239
BmgT120I	GGNCC	5 cut(s)	191, 253, 403, 442, 958
BmiI	GGNNCC	2 cut(s)	741, 960
BmsI	GCATC	5 cut(s)	585, 637, 910, 1006, 1034
BpiI	GAAGAC	1 cut(s)	676
BplI	GAGNNNNNCTC	2 cut(s)	144, 176
BpmI	CTGGAG	2 cut(s)	410, 813
BpuEI	CTTGAG	1 cut(s)	1013
BsaHI	GRCGYC	2 cut(s)	270, 740
BsaI	GGTCTC	2 cut(s)	680, 836
BsaJI	CCNNGG	3 cut(s)	256, 510, 902
BsaWI	WCCGGW	1 cut(s)	149
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
Bse118I	RCCGGY	1 cut(s)	479
Bse1I	ACTGG	1 cut(s)	262
Bse3DI	GCAATG	1 cut(s)	1086
BseAI	TCCGGA	1 cut(s)	149
BseDI	CCNNGG	3 cut(s)	256, 510, 902
BseGI	GGATG	4 cut(s)	646, 652, 1011, 1068
BseLI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
BseMI	GCAATG	1 cut(s)	1086
BseMII	CTCAG	1 cut(s)	606
BseNI	ACTGG	1 cut(s)	262
BseSI	GKGCMC	1 cut(s)	287
BseXI	GCAGC	2 cut(s)	766, 967
BseYI	CCCAGC	2 cut(s)	137, 250
BsgI	GTGCAG	1 cut(s)	460
Bsh1236I	CGCG	3 cut(s)	258, 277, 314
BshFI	GGCC	7 cut(s)	255, 261, 303, 405, 539, 662, 907
BshNI	GGYRCC	1 cut(s)	739
BsiHKAI	GWGCWC	3 cut(s)	287, 396, 474
BsiHKCI	CYCGRG	1 cut(s)	239
BsiSI	CCGG	3 cut(s)	150, 480, 550
BslFI	GGGAC	2 cut(s)	18, 725
BslI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
BsmAI	GTCTC	2 cut(s)	680, 836
BsmFI	GGGAC	2 cut(s)	18, 725
BsnI	GGCC	7 cut(s)	255, 261, 303, 405, 539, 662, 907
Bso31I	GGTCTC	2 cut(s)	680, 836
BsoBI	CYCGRG	1 cut(s)	239
Bsp1286I	GDGCHC	4 cut(s)	173, 287, 396, 474
Bsp13I	TCCGGA	1 cut(s)	149
Bsp143I	GATC	3 cut(s)	462, 496, 931
Bsp19I	CCATGG	1 cut(s)	902
BspACI	CCGC	9 cut(s)	256, 258, 370, 445, 483, 536, 757, 839, 923
BspANI	GGCC	7 cut(s)	255, 261, 303, 405, 539, 662, 907
BspCNI	CTCAG	1 cut(s)	607
BspEI	TCCGGA	1 cut(s)	149
BspFNI	CGCG	3 cut(s)	258, 277, 314
BspLI	GGNNCC	2 cut(s)	741, 960
BspPI	GGATC	1 cut(s)	939
BspT107I	GGYRCC	1 cut(s)	739
BspTNI	GGTCTC	2 cut(s)	680, 836
BsrDI	GCAATG	1 cut(s)	1086
BsrFI	RCCGGY	1 cut(s)	479
BsrI	ACTGG	1 cut(s)	262
BssAI	RCCGGY	1 cut(s)	479
BssECI	CCNNGG	3 cut(s)	256, 510, 902
BssMI	GATC	3 cut(s)	462, 496, 931
BssNI	GRCGYC	2 cut(s)	270, 740
BssSI	CACGAG	1 cut(s)	341
BssT1I	CCWWGG	2 cut(s)	510, 902
Bst2BI	CACGAG	1 cut(s)	341
Bst4CI	ACNGT	1 cut(s)	1071
Bst6I	CTCTTC	1 cut(s)	52
BstACI	GRCGYC	2 cut(s)	270, 740
BstC8I	GCNNGC	5 cut(s)	123, 206, 316, 407, 488
BstDEI	CTNAG	3 cut(s)	615, 815, 963
BstDSI	CCRYGG	2 cut(s)	256, 902
BstENI	CCTNNNNNAGG	1 cut(s)	242
BstF5I	GGATG	4 cut(s)	646, 652, 1011, 1068
BstFNI	CGCG	3 cut(s)	258, 277, 314
BstH2I	RGCGCY	1 cut(s)	743
BstHHI	GCGC	2 cut(s)	742, 901
BstKTI	GATC	3 cut(s)	465, 499, 934
BstMAI	GTCTC	2 cut(s)	680, 836
BstMBI	GATC	3 cut(s)	462, 496, 931
BstMWI	GCNNNNNNNGC	4 cut(s)	162, 267, 483, 898
BstNSI	RCATGY	1 cut(s)	575
BstSLI	GKGCMC	1 cut(s)	287
BstUI	CGCG	3 cut(s)	258, 277, 314
BstV1I	GCAGC	2 cut(s)	766, 967
BstV2I	GAAGAC	1 cut(s)	676
BstX2I	RGATCY	1 cut(s)	931
BstYI	RGATCY	1 cut(s)	931
BsuRI	GGCC	7 cut(s)	255, 261, 303, 405, 539, 662, 907
BtgI	CCRYGG	2 cut(s)	256, 902
BtsCI	GGATG	4 cut(s)	646, 652, 1011, 1068
Cac8I	GCNNGC	5 cut(s)	123, 206, 316, 407, 488
CaiI	CAGNNNCTG	2 cut(s)	454, 983
CfoI	GCGC	2 cut(s)	742, 901
Cfr10I	RCCGGY	1 cut(s)	479
Cfr13I	GGNCC	5 cut(s)	191, 253, 403, 442, 958
Cfr42I	CCGCGG	1 cut(s)	259
CseI	GACGC	2 cut(s)	259, 266
Csp6I	GTAC	1 cut(s)	824
CviAII	CATG	4 cut(s)	32, 466, 572, 903
CviQI	GTAC	1 cut(s)	824
DdeI	CTNAG	3 cut(s)	615, 815, 963
DinI	GGCGCC	1 cut(s)	741
DpnI	GATC	3 cut(s)	464, 498, 933
DpnII	GATC	3 cut(s)	462, 496, 931
EaeI	YGGCCR	2 cut(s)	259, 537
Eam1104I	CTCTTC	1 cut(s)	52
EarI	CTCTTC	1 cut(s)	52
EciI	GGCGGA	1 cut(s)	854
Ecl136II	GAGCTC	1 cut(s)	472
Eco130I	CCWWGG	2 cut(s)	510, 902
Eco24I	GRGCYC	2 cut(s)	173, 474
Eco31I	GGTCTC	2 cut(s)	680, 836
Eco32I	GATATC	1 cut(s)	37
Eco47I	GGWCC	3 cut(s)	191, 442, 958
Eco53kI	GAGCTC	1 cut(s)	472
Eco57I	CTGAAG	1 cut(s)	1005
Eco88I	CYCGRG	1 cut(s)	239
EcoICRI	GAGCTC	1 cut(s)	472
EcoNI	CCTNNNNNAGG	1 cut(s)	242
EcoRI	GAATTC	1 cut(s)	422
EcoRV	GATATC	1 cut(s)	37
EcoT14I	CCWWGG	2 cut(s)	510, 902
EcoT22I	ATGCAT	1 cut(s)	600
EcoT38I	GRGCYC	2 cut(s)	173, 474
EgeI	GGCGCC	1 cut(s)	741
EheI	GGCGCC	1 cut(s)	741
ErhI	CCWWGG	2 cut(s)	510, 902
FaeI	CATG	4 cut(s)	35, 469, 575, 906
FalI	AAGNNNNNCTT	2 cut(s)	867, 899
FaqI	GGGAC	2 cut(s)	18, 725
FatI	CATG	4 cut(s)	31, 465, 571, 902
FbaI	TGATCA	1 cut(s)	462
Fnu4HI	GCNGC	7 cut(s)	256, 259, 484, 537, 755, 924, 981
FokI	GGATG	4 cut(s)	653, 659, 1018, 1075
FriOI	GRGCYC	2 cut(s)	173, 474
Fsp4HI	GCNGC	7 cut(s)	256, 259, 484, 537, 755, 924, 981
GlaI	GCGC	2 cut(s)	741, 900
GluI	GCNGC	7 cut(s)	256, 259, 484, 537, 755, 924, 981
GsaI	CCCAGC	2 cut(s)	141, 254
GsuI	CTGGAG	2 cut(s)	410, 813
HaeII	RGCGCY	1 cut(s)	743
HaeIII	GGCC	7 cut(s)	255, 261, 303, 405, 539, 662, 907
HapII	CCGG	3 cut(s)	150, 480, 550
HgaI	GACGC	2 cut(s)	259, 266
HhaI	GCGC	2 cut(s)	742, 901
Hin1I	GRCGYC	2 cut(s)	270, 740
Hin1II	CATG	4 cut(s)	35, 469, 575, 906
Hin6I	GCGC	2 cut(s)	740, 899
HinP1I	GCGC	2 cut(s)	740, 899
HincII	GTYRAC	1 cut(s)	951
HindII	GTYRAC	1 cut(s)	951
HinfI	GANTC	6 cut(s)	6, 59, 385, 451, 795, 863
HpaI	GTTAAC	1 cut(s)	951
HpaII	CCGG	3 cut(s)	150, 480, 550
HphI	GGTGA	5 cut(s)	45, 54, 62, 107, 1031
Hpy166II	GTNNAC	3 cut(s)	285, 706, 951
Hpy188I	TCNGA	6 cut(s)	191, 384, 501, 919, 1030, 1076
Hpy188III	TCNNGA	6 cut(s)	150, 241, 343, 389, 940, 992
Hpy8I	GTNNAC	3 cut(s)	285, 706, 951
Hpy99I	CGWCG	1 cut(s)	221
HpyAV	CCTTC	3 cut(s)	238, 869, 918
HpyCH4III	ACNGT	1 cut(s)	1071
HpyCH4IV	ACGT	1 cut(s)	219
HpyF10VI	GCNNNNNNNGC	4 cut(s)	162, 267, 483, 898
HpyF3I	CTNAG	3 cut(s)	615, 815, 963
HpySE526I	ACGT	1 cut(s)	219
Hsp92I	GRCGYC	2 cut(s)	270, 740
Hsp92II	CATG	4 cut(s)	35, 469, 575, 906
HspAI	GCGC	2 cut(s)	740, 899
KasI	GGCGCC	1 cut(s)	739
Kpn2I	TCCGGA	1 cut(s)	149
Ksp22I	TGATCA	1 cut(s)	462
KspAI	GTTAAC	1 cut(s)	951
KspI	CCGCGG	1 cut(s)	259
Kzo9I	GATC	3 cut(s)	462, 496, 931
LmnI	GCTCC	3 cut(s)	247, 391, 469
Lsp1109I	GCAGC	2 cut(s)	766, 967
LweI	GCATC	5 cut(s)	585, 637, 910, 1006, 1034
MaeII	ACGT	1 cut(s)	219
MaeIII	GTNAC	3 cut(s)	271, 343, 578
MalI	GATC	3 cut(s)	464, 498, 933
MboI	GATC	3 cut(s)	462, 496, 931
MboII	GAAGA	5 cut(s)	39, 676, 803, 1021, 1105
MflI	RGATCY	1 cut(s)	931
MhlI	GDGCHC	4 cut(s)	173, 287, 396, 474
MluCI	AATT	6 cut(s)	195, 223, 422, 619, 760, 867
MluI	ACGCGT	2 cut(s)	275, 312
Mly113I	GGCGCC	1 cut(s)	740
MlyI	GAGTC	2 cut(s)	804, 857
MmeI	TCCRAC	1 cut(s)	103
Mph1103I	ATGCAT	1 cut(s)	600
MroI	TCCGGA	1 cut(s)	149
MroXI	GAANNNNTTC	1 cut(s)	1070
MseI	TTAA	2 cut(s)	398, 950
MslI	CAYNNNNRTG	1 cut(s)	30
MspA1I	CMGCKG	3 cut(s)	258, 757, 980
MspI	CCGG	3 cut(s)	150, 480, 550
MvnI	CGCG	3 cut(s)	258, 277, 314
MwoI	GCNNNNNNNGC	4 cut(s)	162, 267, 483, 898
NarI	GGCGCC	1 cut(s)	740
NcoI	CCATGG	1 cut(s)	902
NdeII	GATC	3 cut(s)	462, 496, 931
NlaIII	CATG	4 cut(s)	35, 469, 575, 906
NlaIV	GGNNCC	2 cut(s)	741, 960
NmeAIII	GCCGAG	1 cut(s)	141
NmuCI	GTSAC	3 cut(s)	271, 343, 578
NsiI	ATGCAT	1 cut(s)	600
NspI	RCATGY	1 cut(s)	575
PaeR7I	CTCGAG	1 cut(s)	239
PcsI	WCGNNNNNNNCGW	1 cut(s)	225
PdmI	GAANNNNTTC	1 cut(s)	1070
PfeI	GAWTC	3 cut(s)	59, 385, 451
PkrI	GCNGC	7 cut(s)	257, 260, 485, 538, 756, 925, 982
PleI	GAGTC	2 cut(s)	803, 857
PluTI	GGCGCC	1 cut(s)	743
PpsI	GAGTC	2 cut(s)	803, 857
Psp124BI	GAGCTC	1 cut(s)	474
PspFI	CCCAGC	2 cut(s)	137, 250
PspN4I	GGNNCC	2 cut(s)	741, 960
PspPI	GGNCC	5 cut(s)	191, 253, 403, 442, 958
PstNI	CAGNNNCTG	2 cut(s)	454, 983
PsuI	RGATCY	1 cut(s)	931
PvuII	CAGCTG	1 cut(s)	980
RsaI	GTAC	1 cut(s)	825
RsaNI	GTAC	1 cut(s)	824
RseI	CAYNNNNRTG	1 cut(s)	30
SacI	GAGCTC	1 cut(s)	474
SacII	CCGCGG	1 cut(s)	259
SaqAI	TTAA	2 cut(s)	398, 950
SatI	GCNGC	7 cut(s)	256, 259, 484, 537, 755, 924, 981
Sau3AI	GATC	3 cut(s)	462, 496, 931
Sau96I	GGNCC	5 cut(s)	191, 253, 403, 442, 958
SchI	GAGTC	2 cut(s)	804, 857
SduI	GDGCHC	4 cut(s)	173, 287, 396, 474
SfaNI	GCATC	5 cut(s)	585, 637, 910, 1006, 1034
SfoI	GGCGCC	1 cut(s)	741
Sfr274I	CTCGAG	1 cut(s)	239
Sfr303I	CCGCGG	1 cut(s)	259
SgrAI	CRCCGGYG	1 cut(s)	479
SgrBI	CCGCGG	1 cut(s)	259
SinI	GGWCC	3 cut(s)	191, 442, 958
SlaI	CTCGAG	1 cut(s)	239
SmiMI	CAYNNNNRTG	1 cut(s)	30
SmlI	CTYRAG	2 cut(s)	239, 992
SmoI	CTYRAG	2 cut(s)	239, 992
Sse9I	AATT	6 cut(s)	195, 223, 422, 619, 760, 867
SsiI	CCGC	9 cut(s)	256, 258, 370, 445, 483, 536, 757, 839, 923
SspDI	GGCGCC	1 cut(s)	739
SstI	GAGCTC	1 cut(s)	474
StyI	CCWWGG	2 cut(s)	510, 902
TaaI	ACNGT	1 cut(s)	1071
TaiI	ACGT	1 cut(s)	222
TaqI	TCGA	2 cut(s)	240, 690
TaqII	GACCGA	1 cut(s)	860
TasI	AATT	6 cut(s)	195, 223, 422, 619, 760, 867
TauI	GCSGC	5 cut(s)	258, 261, 486, 539, 926
TfiI	GAWTC	3 cut(s)	59, 385, 451
Tru1I	TTAA	2 cut(s)	398, 950
Tru9I	TTAA	2 cut(s)	398, 950
TseFI	GTSAC	3 cut(s)	271, 343, 578
TseI	GCWGC	2 cut(s)	754, 980
Tsp45I	GTSAC	3 cut(s)	271, 343, 578
TspDTI	ATGAA	5 cut(s)	39, 676, 1022, 1079, 1097
TspGWI	ACGGA	1 cut(s)	217
VneI	GTGCAC	1 cut(s)	283
VpaK11BI	GGWCC	3 cut(s)	191, 442, 958
XagI	CCTNNNNNAGG	1 cut(s)	242
XapI	RAATTY	3 cut(s)	223, 422, 619
XceI	RCATGY	1 cut(s)	575
XhoI	CTCGAG	1 cut(s)	239
XmnI	GAANNNNTTC	1 cut(s)	1070
Zsp2I	ATGCAT	1 cut(s)	600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.