Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008188

Physical Location & Seq

Genomic Coordinates Reverse (-)

12271090 .. 12274416

Gene Structure 3327 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011734

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGGGACTCTGTTTCACAAAATCCCACACCCATGATATCCCAATCTCTGCATCCTCCCAAATCGGACCAATTCTGGGCAGGCCTTACGCCGACGTAAATTCCGTTTATACCCTCGAGAAGAGGCTGGGCCGCGGCCAGTCCAGCGTCACGCGTCTCTGCACGGAGAAATCCACGGGCCGAAAATACGCGTGCAAGTCCATATCGTGCAAAAAACTCGTGACGAATGAGGACATTGAGGACTTGCGGAGAGAGGTTCTGATTCTGGAGCACTTAACGGGCCAACCCAATATAGTTGAATTCAAATGTGCTTTTGAGGACCGCCAGAATCTGCATTTGATTATGGAGCTCTGCACCGGCGGCAAGCTTTCTGATCGGATAATTGCCAAGGGAAGCTACACCGAGCGTGAAACGGCCAAGATTTTCCGGCAGATTGTGAATGTGGTGCATGTGTGTCACTTTATGGGAGTGATGCATAGGAATTTGCAGCCTGAGAATTTCTGGCTTGTAAGTAAGGATGAGGATGCACCCATAAAGGCCATTGGTTTTGGTCTCTCTGTCTTCATCGAGCAAGGCAAAGTTTACAGGGACATTGTTGGGAGTGCCTACTATGTGGCGCCAGAAGTGTTGCGGGGGAATTATGGGAAAGAGATAGATGTTTGGAGTGCTGGAGTCATCTTGTATATTCTTCTAAGTGGAGTACCTCCATTTTGGGCTGAGACCAAGAAAGGGATATTTGACTCAATTATAGAAGGAAAACTTGACTTGCATAGTGCACCATGGCCGTCTATATCTGATGCGGCAAAGGATCTCATCAGGAAAATGTTAACAGTGGACCCTAAGAAAAGGATTACAGCTGCTGACGTTCTTGAGCATCAATGGATGGAGAAAGATGGTGAAGCATCTGACAAACCGATTGATAGTGCTGTGCTGATTAGGATGAAACAGTTCAGAGCAATGAACAAGCTGAAGAAACTTGCTCTAAGGGTCATAGCAGAAACGCTTTCTGAAGAAGATATTCATGGCCTGAAACAAATGTTCAACAACATTGACACAGATGGTAGTGGTAATATCACAGTTGAAGAACTAAGAACTGGATTGTCAAGGCTGGGAGCTAAGCTTACAGAAGCAGAAATAAAGCAGCTGATGGATGCTGCTGACATAGACAATAATGGGACTATTGATTACACTGAATTCATTACTGCAACCATGAATCGACACAAACTGGAGAAGGAAGAAAACTTGCACAAGGCTTTCCTTTACTTTGACAAGAATCAGAGCGGGTTTATCACAAGAGATGAGCTAAGACAAGCAATGACTGAATATGGGATGGGGGATGAGGCTACGATAGATGAAGTCCTTGAAGACGTGGATACTGATAAAGATGGGAGAATCAGTTATGAGGAGTTCGTAGCCATGATGACACGGGGAGTTGCAGATTACGATGATAAACCAGATAGGGTGATTGTTCCACCTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0047484 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901000 GO:1901002 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

493

Amino Acids

55.51

Weight (kDa)

5.48

Isoelectric Point (pI)

39.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	36 - 294	7.5e-68	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	37 - 290	2.7e-21	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	342 - 402	1.7e-14	EF-hand domain pair
EF-hand_1	PF00036	342 - 368	4.7e-06	EF hand domain
EF-hand_6	PF13405	342 - 370	8.9e-06	EF-hand domain
EF-hand_5	PF13202	342 - 364	7.2e-06	EF hand
EF-hand_8	PF13833	354 - 401	4.5e-08	EF-hand domain pair
EF-hand_7	PF13499	411 - 474	7.1e-17	EF-hand domain pair
EF-hand_1	PF00036	414 - 440	1.7e-06	EF hand domain
EF-hand_6	PF13405	414 - 442	4.5e-07	EF-hand domain
EF-hand_8	PF13833	426 - 475	2.6e-06	EF-hand domain pair
EF-hand_1	PF00036	449 - 475	1.6e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76040 AT1G76040 AT1G76040 AT1G76040
fragaria_vesca	FvH4_2g38010 FvH4_2g38010
malus_domestica	MD15G1007200.v1.1
prunus_persica	Prupe.1G360100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0303601
rosa_laevigata	RLG00000011069 RLG00000011734
rosa_multiflora	Rmu_ssc0000114.1_g000023
rosa_roxburghii	Rroxscaffold_7G00164590
rosa_rugosa	Rorug06G0257300 Rorug06G0322800
rosa_samantha	Rh6AG437100 Rh6BG377600 Rh6BG377700 Rh6BG466100 Rh6CG449200 Rh6DG370300 Rh6DG435900
rosa_wichuraiana	Rw6G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	613
AccBSI	CCGCTC	1 cut(s)	1278
AccII	CGCG	3 cut(s)	132, 151, 188
AciI	CCGC	8 cut(s)	130, 132, 244, 319, 357, 628, 797, 1278
AclWI	GGATC	1 cut(s)	813
AcoI	YGGCCR	3 cut(s)	133, 411, 779
AcsI	RAATTY	5 cut(s)	97, 296, 478, 493, 1190
AcuI	CTGAAG	2 cut(s)	986, 1026
AcyI	GRCGYC	1 cut(s)	614
AfaI	GTAC	1 cut(s)	699
AfiI	CCNNNNNNNGG	2 cut(s)	74, 726
AflIII	ACRYGT	2 cut(s)	149, 186
AgsI	TTSAA	5 cut(s)	296, 301, 1039, 1079, 1361
AjiI	CACGTC	1 cut(s)	1366
AluBI	AGCT	9 cut(s)	346, 364, 393, 854, 964, 1112, 1117, 1141, 1300
AluI	AGCT	9 cut(s)	346, 364, 393, 854, 964, 1112, 1117, 1141, 1300
Alw21I	GWGCWC	3 cut(s)	270, 348, 775
Alw26I	GTCTC	3 cut(s)	158, 554, 710
Alw44I	GTGCAC	1 cut(s)	771
AlwI	GGATC	1 cut(s)	813
AlwNI	CAGNNNCTG	2 cut(s)	328, 857
Ama87I	CYCGRG	1 cut(s)	113
AoxI	GGCC	9 cut(s)	80, 127, 133, 175, 277, 411, 534, 779, 1021
ApaLI	GTGCAC	1 cut(s)	771
ApeKI	GCWGC	4 cut(s)	484, 854, 1138, 1151
ApoI	RAATTY	5 cut(s)	97, 296, 478, 493, 1190
Asp700I	GAANNNNTTC	2 cut(s)	944, 1014
AspLEI	GCGC	1 cut(s)	616
AspS9I	GGNCC	6 cut(s)	65, 127, 175, 277, 316, 832
AsuHPI	GGTGA	2 cut(s)	905, 1471
AvaI	CYCGRG	1 cut(s)	113
AvaII	GGWCC	3 cut(s)	65, 316, 832
BaeGI	GKGCMC	1 cut(s)	775
BanI	GGYRCC	1 cut(s)	613
BanII	GRGCYC	1 cut(s)	348
BauI	CACGAG	1 cut(s)	215
BbsI	GAAGAC	2 cut(s)	550, 1368
Bbv12I	GWGCWC	3 cut(s)	270, 348, 775
BbvI	GCAGC	4 cut(s)	496, 841, 1138, 1150
BccI	CCATC	6 cut(s)	874, 884, 1049, 1138, 1321, 1376
BceAI	ACGGC	2 cut(s)	426, 766
BcgI	CGANNNNNNTGC	2 cut(s)	196, 230
BciVI	GTATCC	1 cut(s)	1363
BcoDI	GTCTC	3 cut(s)	158, 554, 710
BfoI	RGCGCY	1 cut(s)	617
BfuI	GTATCC	1 cut(s)	1363
BisI	GCNGC	8 cut(s)	130, 133, 358, 485, 798, 855, 1139, 1152
BlpI	GCTNAGC	1 cut(s)	1113
BlsI	GCNGC	8 cut(s)	131, 134, 359, 486, 799, 856, 1140, 1153
Bme18I	GGWCC	3 cut(s)	65, 316, 832
BmeT110I	CYCGRG	1 cut(s)	113
BmgBI	CACGTC	1 cut(s)	1366
BmgT120I	GGNCC	6 cut(s)	65, 127, 175, 277, 316, 832
BmiI	GGNNCC	2 cut(s)	615, 834
BmsI	GCATC	7 cut(s)	59, 459, 511, 784, 880, 908, 1138
BpiI	GAAGAC	2 cut(s)	550, 1368
BpmI	CTGGAG	3 cut(s)	284, 687, 1244
Bpu1102I	GCTNAGC	1 cut(s)	1113
BpuEI	CTTGAG	1 cut(s)	887
BsaHI	GRCGYC	1 cut(s)	614
BsaI	GGTCTC	2 cut(s)	554, 710
BsaJI	CCNNGG	4 cut(s)	130, 171, 384, 776
BsaXI	ACNNNNNCTCC	2 cut(s)	1378, 1408
Bsc4I	CCNNNNNNNGG	2 cut(s)	74, 726
Bse118I	RCCGGY	1 cut(s)	353
Bse1I	ACTGG	3 cut(s)	136, 1096, 1227
Bse3DI	GCAATG	2 cut(s)	960, 1317
BseDI	CCNNGG	4 cut(s)	130, 171, 384, 776
BseGI	GGATG	8 cut(s)	50, 520, 526, 885, 942, 1153, 1332, 1339
BseLI	CCNNNNNNNGG	2 cut(s)	74, 726
BseMI	GCAATG	2 cut(s)	960, 1317
BseMII	CTCAG	2 cut(s)	480, 705
BseNI	ACTGG	3 cut(s)	136, 1096, 1227
BseRI	GAGGAG	1 cut(s)	1415
BseSI	GKGCMC	1 cut(s)	775
BseXI	GCAGC	4 cut(s)	496, 841, 1138, 1150
BseYI	CCCAGC	2 cut(s)	124, 1105
BsgI	GTGCAG	2 cut(s)	142, 334
Bsh1236I	CGCG	3 cut(s)	132, 151, 188
BshFI	GGCC	9 cut(s)	82, 129, 135, 177, 279, 413, 536, 781, 1023
BshNI	GGYRCC	1 cut(s)	613
BsiHKAI	GWGCWC	3 cut(s)	270, 348, 775
BsiHKCI	CYCGRG	1 cut(s)	113
BsiSI	CCGG	2 cut(s)	354, 424
BslFI	GGGAC	3 cut(s)	18, 599, 1186
BslI	CCNNNNNNNGG	2 cut(s)	74, 726
BsmAI	GTCTC	3 cut(s)	158, 554, 710
BsmBI	CGTCTC	1 cut(s)	158
BsmFI	GGGAC	3 cut(s)	18, 599, 1186
BsnI	GGCC	9 cut(s)	82, 129, 135, 177, 279, 413, 536, 781, 1023
Bso31I	GGTCTC	2 cut(s)	554, 710
BsoBI	CYCGRG	1 cut(s)	113
Bsp1286I	GDGCHC	3 cut(s)	270, 348, 775
Bsp143I	GATC	2 cut(s)	370, 805
Bsp1720I	GCTNAGC	1 cut(s)	1113
Bsp19I	CCATGG	1 cut(s)	776
BspACI	CCGC	8 cut(s)	130, 132, 244, 319, 357, 628, 797, 1278
BspANI	GGCC	9 cut(s)	82, 129, 135, 177, 279, 413, 536, 781, 1023
BspCNI	CTCAG	2 cut(s)	481, 706
BspFNI	CGCG	3 cut(s)	132, 151, 188
BspLI	GGNNCC	2 cut(s)	615, 834
BspPI	GGATC	1 cut(s)	813
BspT107I	GGYRCC	1 cut(s)	613
BspTNI	GGTCTC	2 cut(s)	554, 710
BsrBI	CCGCTC	1 cut(s)	1278
BsrDI	GCAATG	2 cut(s)	960, 1317
BsrFI	RCCGGY	1 cut(s)	353
BsrI	ACTGG	3 cut(s)	136, 1096, 1227
BssAI	RCCGGY	1 cut(s)	353
BssECI	CCNNGG	4 cut(s)	130, 171, 384, 776
BssMI	GATC	2 cut(s)	370, 805
BssNI	GRCGYC	1 cut(s)	614
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	2 cut(s)	384, 776
Bst2BI	CACGAG	1 cut(s)	215
Bst4CI	ACNGT	3 cut(s)	829, 945, 1075
Bst6I	CTCTTC	1 cut(s)	113
BstACI	GRCGYC	1 cut(s)	614
BstC8I	GCNNGC	3 cut(s)	80, 190, 362
BstDEI	CTNAG	8 cut(s)	489, 689, 714, 837, 980, 1085, 1113, 1301
BstDSI	CCRYGG	3 cut(s)	130, 171, 776
BstF5I	GGATG	8 cut(s)	50, 520, 526, 885, 942, 1153, 1332, 1339
BstFNI	CGCG	3 cut(s)	132, 151, 188
BstH2I	RGCGCY	1 cut(s)	617
BstHHI	GCGC	1 cut(s)	616
BstKTI	GATC	2 cut(s)	373, 808
BstMAI	GTCTC	3 cut(s)	158, 554, 710
BstMBI	GATC	2 cut(s)	370, 805
BstMWI	GCNNNNNNNGC	2 cut(s)	141, 357
BstNSI	RCATGY	1 cut(s)	449
BstSLI	GKGCMC	1 cut(s)	775
BstUI	CGCG	3 cut(s)	132, 151, 188
BstV1I	GCAGC	4 cut(s)	496, 841, 1138, 1150
BstV2I	GAAGAC	2 cut(s)	550, 1368
BstX2I	RGATCY	1 cut(s)	805
BstYI	RGATCY	1 cut(s)	805
BsuI	GTATCC	1 cut(s)	1363
BsuRI	GGCC	9 cut(s)	82, 129, 135, 177, 279, 413, 536, 781, 1023
BtgI	CCRYGG	3 cut(s)	130, 171, 776
BtrI	CACGTC	1 cut(s)	1366
BtsCI	GGATG	8 cut(s)	50, 520, 526, 885, 942, 1153, 1332, 1339
BtsIMutI	CAGTG	2 cut(s)	834, 1185
Cac8I	GCNNGC	3 cut(s)	80, 190, 362
CaiI	CAGNNNCTG	2 cut(s)	328, 857
CfoI	GCGC	1 cut(s)	616
Cfr10I	RCCGGY	1 cut(s)	353
Cfr13I	GGNCC	6 cut(s)	65, 127, 175, 277, 316, 832
Cfr42I	CCGCGG	1 cut(s)	133
CseI	GACGC	2 cut(s)	133, 140
Csp6I	GTAC	1 cut(s)	698
CviAII	CATG	6 cut(s)	32, 446, 777, 1019, 1207, 1414
CviQI	GTAC	1 cut(s)	698
DdeI	CTNAG	8 cut(s)	489, 689, 714, 837, 980, 1085, 1113, 1301
DinI	GGCGCC	1 cut(s)	615
DpnI	GATC	2 cut(s)	372, 807
DpnII	GATC	2 cut(s)	370, 805
EaeI	YGGCCR	3 cut(s)	133, 411, 779
Eam1104I	CTCTTC	1 cut(s)	113
EarI	CTCTTC	1 cut(s)	113
Ecl136II	GAGCTC	1 cut(s)	346
Eco130I	CCWWGG	2 cut(s)	384, 776
Eco147I	AGGCCT	1 cut(s)	82
Eco24I	GRGCYC	1 cut(s)	348
Eco31I	GGTCTC	2 cut(s)	554, 710
Eco32I	GATATC	1 cut(s)	37
Eco47I	GGWCC	3 cut(s)	65, 316, 832
Eco53kI	GAGCTC	1 cut(s)	346
Eco57I	CTGAAG	2 cut(s)	986, 1026
Eco88I	CYCGRG	1 cut(s)	113
EcoICRI	GAGCTC	1 cut(s)	346
EcoRI	GAATTC	2 cut(s)	296, 1190
EcoRV	GATATC	1 cut(s)	37
EcoT14I	CCWWGG	2 cut(s)	384, 776
EcoT22I	ATGCAT	1 cut(s)	474
EcoT38I	GRGCYC	1 cut(s)	348
EgeI	GGCGCC	1 cut(s)	615
EheI	GGCGCC	1 cut(s)	615
ErhI	CCWWGG	2 cut(s)	384, 776
Esp3I	CGTCTC	1 cut(s)	158
FaeI	CATG	6 cut(s)	35, 449, 780, 1022, 1210, 1417
FalI	AAGNNNNNCTT	2 cut(s)	741, 773
FaqI	GGGAC	3 cut(s)	18, 599, 1186
FatI	CATG	6 cut(s)	31, 445, 776, 1018, 1206, 1413
FauI	CCCGC	2 cut(s)	621, 1271
Fnu4HI	GCNGC	8 cut(s)	130, 133, 358, 485, 798, 855, 1139, 1152
FokI	GGATG	8 cut(s)	37, 527, 533, 892, 949, 1160, 1339, 1346
FriOI	GRGCYC	1 cut(s)	348
Fsp4HI	GCNGC	8 cut(s)	130, 133, 358, 485, 798, 855, 1139, 1152
GlaI	GCGC	1 cut(s)	615
GluI	GCNGC	8 cut(s)	130, 133, 358, 485, 798, 855, 1139, 1152
GsaI	CCCAGC	2 cut(s)	128, 1109
GsuI	CTGGAG	3 cut(s)	284, 687, 1244
HaeII	RGCGCY	1 cut(s)	617
HaeIII	GGCC	9 cut(s)	82, 129, 135, 177, 279, 413, 536, 781, 1023
HapII	CCGG	2 cut(s)	354, 424
HgaI	GACGC	2 cut(s)	133, 140
HhaI	GCGC	1 cut(s)	616
Hin1I	GRCGYC	1 cut(s)	614
Hin1II	CATG	6 cut(s)	35, 449, 780, 1022, 1210, 1417
Hin6I	GCGC	1 cut(s)	614
HinP1I	GCGC	1 cut(s)	614
HincII	GTYRAC	1 cut(s)	825
HindII	GTYRAC	1 cut(s)	825
HindIII	AAGCTT	2 cut(s)	362, 1115
HinfI	GANTC	8 cut(s)	6, 259, 325, 669, 737, 1210, 1270, 1389
HpaI	GTTAAC	1 cut(s)	825
HpaII	CCGG	2 cut(s)	354, 424
HphI	GGTGA	2 cut(s)	905, 1471
Hpy166II	GTNNAC	4 cut(s)	580, 773, 825, 832
Hpy188I	TCNGA	9 cut(s)	65, 258, 370, 375, 793, 904, 950, 1006, 1275
Hpy188III	TCNNGA	5 cut(s)	115, 217, 263, 814, 866
Hpy8I	GTNNAC	4 cut(s)	580, 773, 825, 832
Hpy99I	CGWCG	1 cut(s)	95
HpyAV	CCTTC	2 cut(s)	743, 1222
HpyCH4III	ACNGT	3 cut(s)	829, 945, 1075
HpyCH4IV	ACGT	3 cut(s)	93, 861, 1365
HpyF10VI	GCNNNNNNNGC	2 cut(s)	141, 357
HpyF3I	CTNAG	8 cut(s)	489, 689, 714, 837, 980, 1085, 1113, 1301
HpySE526I	ACGT	3 cut(s)	93, 861, 1365
Hsp92I	GRCGYC	1 cut(s)	614
Hsp92II	CATG	6 cut(s)	35, 449, 780, 1022, 1210, 1417
HspAI	GCGC	1 cut(s)	614
KasI	GGCGCC	1 cut(s)	613
KspAI	GTTAAC	1 cut(s)	825
KspI	CCGCGG	1 cut(s)	133
Kzo9I	GATC	2 cut(s)	370, 805
LmnI	GCTCC	3 cut(s)	265, 343, 1109
Lsp1109I	GCAGC	4 cut(s)	496, 841, 1138, 1150
LweI	GCATC	7 cut(s)	59, 459, 511, 784, 880, 908, 1138
MaeII	ACGT	3 cut(s)	93, 861, 1365
MaeIII	GTNAC	3 cut(s)	145, 217, 452
MalI	GATC	2 cut(s)	372, 807
MbiI	CCGCTC	1 cut(s)	1278
MboI	GATC	2 cut(s)	370, 805
MboII	GAAGA	9 cut(s)	130, 550, 677, 979, 1019, 1022, 1091, 1244, 1373
MflI	RGATCY	1 cut(s)	805
MhlI	GDGCHC	3 cut(s)	270, 348, 775
MluCI	AATT	9 cut(s)	69, 97, 296, 378, 478, 493, 634, 741, 1190
MluI	ACGCGT	2 cut(s)	149, 186
Mly113I	GGCGCC	1 cut(s)	614
MlyI	GAGTC	2 cut(s)	678, 731
Mph1103I	ATGCAT	1 cut(s)	474
MroXI	GAANNNNTTC	2 cut(s)	944, 1014
MseI	TTAA	2 cut(s)	272, 824
MslI	CAYNNNNRTG	1 cut(s)	30
MspA1I	CMGCKG	3 cut(s)	132, 854, 1141
MspI	CCGG	2 cut(s)	354, 424
MvnI	CGCG	3 cut(s)	132, 151, 188
MwoI	GCNNNNNNNGC	2 cut(s)	141, 357
NarI	GGCGCC	1 cut(s)	614
NcoI	CCATGG	1 cut(s)	776
NdeII	GATC	2 cut(s)	370, 805
NlaIII	CATG	6 cut(s)	35, 449, 780, 1022, 1210, 1417
NlaIV	GGNNCC	2 cut(s)	615, 834
NmuCI	GTSAC	3 cut(s)	145, 217, 452
NsiI	ATGCAT	1 cut(s)	474
NspI	RCATGY	1 cut(s)	449
PaeR7I	CTCGAG	1 cut(s)	113
PceI	AGGCCT	1 cut(s)	82
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PdmI	GAANNNNTTC	2 cut(s)	944, 1014
PfeI	GAWTC	5 cut(s)	259, 325, 1210, 1270, 1389
PkrI	GCNGC	8 cut(s)	131, 134, 359, 486, 799, 856, 1140, 1153
PleI	GAGTC	2 cut(s)	677, 731
PluTI	GGCGCC	1 cut(s)	617
PpsI	GAGTC	2 cut(s)	677, 731
Psp124BI	GAGCTC	1 cut(s)	348
PspFI	CCCAGC	2 cut(s)	124, 1105
PspN4I	GGNNCC	2 cut(s)	615, 834
PspPI	GGNCC	6 cut(s)	65, 127, 175, 277, 316, 832
PstNI	CAGNNNCTG	2 cut(s)	328, 857
PsuI	RGATCY	1 cut(s)	805
PvuII	CAGCTG	2 cut(s)	854, 1141
RsaI	GTAC	1 cut(s)	699
RsaNI	GTAC	1 cut(s)	698
RseI	CAYNNNNRTG	1 cut(s)	30
SacI	GAGCTC	1 cut(s)	348
SacII	CCGCGG	1 cut(s)	133
SaqAI	TTAA	2 cut(s)	272, 824
SatI	GCNGC	8 cut(s)	130, 133, 358, 485, 798, 855, 1139, 1152
Sau3AI	GATC	2 cut(s)	370, 805
Sau96I	GGNCC	6 cut(s)	65, 127, 175, 277, 316, 832
SchI	GAGTC	2 cut(s)	678, 731
SduI	GDGCHC	3 cut(s)	270, 348, 775
SfaNI	GCATC	7 cut(s)	59, 459, 511, 784, 880, 908, 1138
SfoI	GGCGCC	1 cut(s)	615
Sfr274I	CTCGAG	1 cut(s)	113
Sfr303I	CCGCGG	1 cut(s)	133
SgrAI	CRCCGGYG	1 cut(s)	353
SgrBI	CCGCGG	1 cut(s)	133
SinI	GGWCC	3 cut(s)	65, 316, 832
SlaI	CTCGAG	1 cut(s)	113
SmiMI	CAYNNNNRTG	1 cut(s)	30
SmlI	CTYRAG	2 cut(s)	113, 866
SmoI	CTYRAG	2 cut(s)	113, 866
Sse9I	AATT	9 cut(s)	69, 97, 296, 378, 478, 493, 634, 741, 1190
SseBI	AGGCCT	1 cut(s)	82
SsiI	CCGC	8 cut(s)	130, 132, 244, 319, 357, 628, 797, 1278
SspDI	GGCGCC	1 cut(s)	613
SstI	GAGCTC	1 cut(s)	348
StuI	AGGCCT	1 cut(s)	82
StyI	CCWWGG	2 cut(s)	384, 776
TaaI	ACNGT	3 cut(s)	829, 945, 1075
TaiI	ACGT	3 cut(s)	96, 864, 1368
TaqI	TCGA	3 cut(s)	114, 564, 1213
TasI	AATT	9 cut(s)	69, 97, 296, 378, 478, 493, 634, 741, 1190
TauI	GCSGC	4 cut(s)	132, 135, 360, 800
TfiI	GAWTC	5 cut(s)	259, 325, 1210, 1270, 1389
Tru1I	TTAA	2 cut(s)	272, 824
Tru9I	TTAA	2 cut(s)	272, 824
TscAI	CASTG	2 cut(s)	834, 1192
TseFI	GTSAC	3 cut(s)	145, 217, 452
TseI	GCWGC	4 cut(s)	484, 854, 1138, 1151
Tsp45I	GTSAC	3 cut(s)	145, 217, 452
TspDTI	ATGAA	7 cut(s)	550, 953, 971, 1007, 1183, 1223, 1365
TspGWI	ACGGA	2 cut(s)	91, 176
TspRI	CASTG	2 cut(s)	834, 1192
VneI	GTGCAC	1 cut(s)	771
VpaK11BI	GGWCC	3 cut(s)	65, 316, 832
XapI	RAATTY	5 cut(s)	97, 296, 478, 493, 1190
XceI	RCATGY	1 cut(s)	449
XhoI	CTCGAG	1 cut(s)	113
XmnI	GAANNNNTTC	2 cut(s)	944, 1014
Zsp2I	ATGCAT	1 cut(s)	474

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.