Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008188

Physical Location & Seq

Genomic Coordinates Reverse (-)

6547089 .. 6550930

Gene Structure 3842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00164590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGGACTCTGTTTCACAAAATCCCACACCCATGATATCCCAATCTCTTCATCATCAGAATCACCACCTCACCACTTCCAACAAACACAACCCAACAAAAAACCCGGCCCGTTTCAGCAGCCAGCTCCACCCAAACCCAGCCCCTACTCTGGAGTCTCTTTCGGCAAGAGCCCCTCGTCCTCCCAAATCGGACCAATTCTGGGCAAGCCTTACGCCGACGTAAATTCCGTTTATACCCTCGAGAAGGAGCTGGGCCGCGGCCAGTTCGGCGTCACGCGTCTCTGCACCGAGAAATCCACTGGCCGAAAATACGCGTGCAAGTCCATATCGTGCAAAAAACTCGTGACGAATAAGGACATTGAGGACTTGCGGAGAGAGGTTCTGATTCTGGAGCACTTAACGGGCCAGCCCAATATAGTTGAATTCAAAGGTGCTTTTGAGGACCGCCAGAATCTGCATTTGATTATGGAGCTCTGCACCGGCGGCGAGCTTTTTGATCGGATTATTGCCAAGGGAAGCTACACCGAGCGTGAAGCGGCCAAGATTTTCCGGCAGATTGTGAATGTGGTGCATGTGTGTCACTTTATGGGAGTGATGCATAGGGATTTGAAGCCTGAGAATTTCTTGCTTGTAAGTAAGGATGAGGATGCACCGATAAAGGCTATTGATTTTGGACTCTCTGTCTTCATCGAGCAAGGCAAAGTTTACAGGGACATTGTTGGGAGTGCCTACTATGTGGCGCCAGAAGTGTTGCTGCGGAATTATGGGAAAGAGATAGACGTTTGGAGTGCTGGAGTCATCTTGTATATTCTTCTAAGTGGAGTACCTCCATTTTGGGCGGAGACCGAGAAAGGGATATTTGACTCAATTATAGAAGGAAAACTTGACTTGCAAAGTGCGCCATGGCCTTCTATATCTGATGCGGCAAAGGATCTCATCAGGAAAATGTTAACAATGGACCCTAAGAAAAGGATTACAGCTGCTGAAGTTCTTGAGCATCAATGGATGAAGAAAGATGGTGAAGCTTCTGACAAACCTATTGATAGTGCTGTGCTGATTAGGATGAAACAGTTCAGAGCAATGAACAAGTTGAAGAAACTTGCTCTAAAGGTCATAGCAGAAACGCTTTCTGAAGAAGAGATTCATGGCCTGAAACAAATGTTCAACAACATTGACACAGATGGTAGTGGTAATATCACAGTTGAAGAACTAAGAACTGGATTGTCAAGGCTGGGATCTAAGCTTACAGAAGCAGAAATAAAGCAGCTGATGGATGCTGCTGACATAGACAATAATGGGACTATTGATTACACTGAATTCATTACTGCAACCATGCATCGACACAAACTGGAGAAGGAAGAAAACTTGCACAAGGCTTTCCTTTACTTTGACAAGGATCAGAGCGGGTTTATCACAAGAGATGAGCTAAGACAAGCAATGACTGAATATGGGATGGGGGATGAGGCTACGATAGATGAAGTCCTTGAAGATGTGGATACTGATAAAGATGGGAGAATCAATTATGAGGAGTTCGTAGCCATGATGACACGGGGAATTGCAGATTACGAAGATAAACCAGATAGGGTGATTGTTCTACCTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0047484 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901000 GO:1901002 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

534

Amino Acids

60.14

Weight (kDa)

5.54

Isoelectric Point (pI)

44.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	78 - 336	6.7e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	79 - 332	5.5e-27	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	384 - 444	1.8e-14	EF-hand domain pair
EF-hand_1	PF00036	384 - 410	5.2e-06	EF hand domain
EF-hand_6	PF13405	384 - 412	9.9e-06	EF-hand domain
EF-hand_5	PF13202	384 - 406	7.9e-06	EF hand
EF-hand_8	PF13833	396 - 443	1e-07	EF-hand domain pair
EF-hand_7	PF13499	453 - 516	3.5e-16	EF-hand domain pair
EF-hand_1	PF00036	456 - 482	1.2e-06	EF hand domain
EF-hand_6	PF13405	456 - 484	3.2e-07	EF-hand domain
EF-hand_8	PF13833	468 - 517	4.7e-06	EF-hand domain pair
EF-hand_1	PF00036	491 - 517	2.1e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76040 AT1G76040 AT1G76040 AT1G76040
fragaria_vesca	FvH4_2g38010 FvH4_2g38010
malus_domestica	MD15G1007200.v1.1
prunus_persica	Prupe.1G360100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0303601
rosa_laevigata	RLG00000011069 RLG00000011734
rosa_multiflora	Rmu_ssc0000114.1_g000023
rosa_roxburghii	Rroxscaffold_7G00164590
rosa_rugosa	Rorug06G0257300 Rorug06G0322800
rosa_samantha	Rh6AG437100 Rh6BG377600 Rh6BG377700 Rh6BG466100 Rh6CG449200 Rh6DG370300 Rh6DG435900
rosa_wichuraiana	Rw6G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	739
AccBSI	CCGCTC	1 cut(s)	1404
AccII	CGCG	3 cut(s)	258, 277, 314
AclWI	GGATC	3 cut(s)	939, 1243, 1404
AcoI	YGGCCR	3 cut(s)	259, 301, 537
AcsI	RAATTY	4 cut(s)	223, 422, 619, 1316
AcuI	CTGAAG	2 cut(s)	1005, 1152
AcyI	GRCGYC	2 cut(s)	270, 740
AfaI	GTAC	1 cut(s)	825
AfiI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
AflIII	ACRYGT	2 cut(s)	275, 312
AgsI	TTSAA	7 cut(s)	422, 427, 610, 1093, 1165, 1205, 1487
AhdI	GACNNNNNGTC	1 cut(s)	680
Alw21I	GWGCWC	2 cut(s)	396, 474
Alw26I	GTCTC	3 cut(s)	160, 284, 836
AlwI	GGATC	3 cut(s)	939, 1243, 1404
AlwNI	CAGNNNCTG	2 cut(s)	454, 983
Ama87I	CYCGRG	1 cut(s)	239
AoxI	GGCC	8 cut(s)	106, 253, 259, 301, 403, 537, 905, 1147
ApeKI	GCWGC	5 cut(s)	118, 754, 980, 1264, 1277
ApoI	RAATTY	4 cut(s)	223, 422, 619, 1316
Asp700I	GAANNNNTTC	2 cut(s)	1070, 1140
AspLEI	GCGC	2 cut(s)	742, 901
AspS9I	GGNCC	6 cut(s)	107, 191, 253, 403, 442, 958
AsuC2I	CCSGG	1 cut(s)	105
AsuHPI	GGTGA	4 cut(s)	54, 62, 1031, 1597
AvaI	CYCGRG	1 cut(s)	239
AvaII	GGWCC	3 cut(s)	191, 442, 958
BanI	GGYRCC	1 cut(s)	739
BanII	GRGCYC	2 cut(s)	173, 474
BauI	CACGAG	1 cut(s)	341
BbsI	GAAGAC	1 cut(s)	676
Bbv12I	GWGCWC	2 cut(s)	396, 474
BbvI	GCAGC	5 cut(s)	130, 741, 967, 1264, 1276
BccI	CCATC	5 cut(s)	1010, 1175, 1264, 1447, 1502
BcgI	CGANNNNNNTGC	2 cut(s)	322, 356
BciVI	GTATCC	1 cut(s)	1489
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	3 cut(s)	160, 284, 836
BfoI	RGCGCY	1 cut(s)	743
BfuI	GTATCC	1 cut(s)	1489
BglI	GCCNNNNNGGC	1 cut(s)	267
Bme1390I	CCNGG	1 cut(s)	105
Bme18I	GGWCC	3 cut(s)	191, 442, 958
BmeRI	GACNNNNNGTC	1 cut(s)	680
BmeT110I	CYCGRG	1 cut(s)	239
BmgT120I	GGNCC	6 cut(s)	107, 191, 253, 403, 442, 958
BmiI	GGNNCC	2 cut(s)	741, 960
BmrFI	CCNGG	1 cut(s)	105
BmsI	GCATC	6 cut(s)	585, 637, 910, 1006, 1264, 1345
BpiI	GAAGAC	1 cut(s)	676
BpmI	CTGGAG	4 cut(s)	171, 410, 813, 1370
BpuEI	CTTGAG	1 cut(s)	1013
BpuMI	CCSGG	1 cut(s)	105
BsaHI	GRCGYC	2 cut(s)	270, 740
BsaI	GGTCTC	1 cut(s)	836
BsaJI	CCNNGG	3 cut(s)	256, 510, 902
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
Bse118I	RCCGGY	1 cut(s)	479
Bse1I	ACTGG	4 cut(s)	262, 304, 1222, 1353
Bse3DI	GCAATG	2 cut(s)	1086, 1443
BseDI	CCNNGG	3 cut(s)	256, 510, 902
BseGI	GGATG	7 cut(s)	646, 652, 1011, 1068, 1279, 1458, 1465
BseLI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
BseMI	GCAATG	2 cut(s)	1086, 1443
BseMII	CTCAG	1 cut(s)	606
BseNI	ACTGG	4 cut(s)	262, 304, 1222, 1353
BseRI	GAGGAG	1 cut(s)	1541
BseXI	GCAGC	5 cut(s)	130, 741, 967, 1264, 1276
BseYI	CCCAGC	3 cut(s)	137, 250, 1231
BsgI	GTGCAG	2 cut(s)	268, 460
Bsh1236I	CGCG	3 cut(s)	258, 277, 314
BshFI	GGCC	8 cut(s)	108, 255, 261, 303, 405, 539, 907, 1149
BshNI	GGYRCC	1 cut(s)	739
BsiHKAI	GWGCWC	2 cut(s)	396, 474
BsiHKCI	CYCGRG	1 cut(s)	239
BsiSI	CCGG	3 cut(s)	105, 480, 550
BslFI	GGGAC	3 cut(s)	18, 725, 1312
BslI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
BsmAI	GTCTC	3 cut(s)	160, 284, 836
BsmBI	CGTCTC	1 cut(s)	284
BsmFI	GGGAC	3 cut(s)	18, 725, 1312
BsnI	GGCC	8 cut(s)	108, 255, 261, 303, 405, 539, 907, 1149
Bso31I	GGTCTC	1 cut(s)	836
BsoBI	CYCGRG	1 cut(s)	239
Bsp1286I	GDGCHC	3 cut(s)	173, 396, 474
Bsp143I	GATC	4 cut(s)	496, 931, 1235, 1396
Bsp19I	CCATGG	1 cut(s)	902
BspANI	GGCC	8 cut(s)	108, 255, 261, 303, 405, 539, 907, 1149
BspCNI	CTCAG	1 cut(s)	607
BspFNI	CGCG	3 cut(s)	258, 277, 314
BspLI	GGNNCC	2 cut(s)	741, 960
BspPI	GGATC	3 cut(s)	939, 1243, 1404
BspT107I	GGYRCC	1 cut(s)	739
BspTNI	GGTCTC	1 cut(s)	836
BsrBI	CCGCTC	1 cut(s)	1404
BsrDI	GCAATG	2 cut(s)	1086, 1443
BsrFI	RCCGGY	1 cut(s)	479
BsrI	ACTGG	4 cut(s)	262, 304, 1222, 1353
BssAI	RCCGGY	1 cut(s)	479
BssECI	CCNNGG	3 cut(s)	256, 510, 902
BssMI	GATC	4 cut(s)	496, 931, 1235, 1396
BssNI	GRCGYC	2 cut(s)	270, 740
BssSI	CACGAG	1 cut(s)	341
BssT1I	CCWWGG	2 cut(s)	510, 902
Bst2BI	CACGAG	1 cut(s)	341
Bst4CI	ACNGT	2 cut(s)	1071, 1201
Bst6I	CTCTTC	2 cut(s)	52, 1131
BstACI	GRCGYC	2 cut(s)	270, 740
BstC8I	GCNNGC	5 cut(s)	123, 206, 316, 407, 488
BstDEI	CTNAG	6 cut(s)	615, 815, 963, 1211, 1239, 1427
BstDSI	CCRYGG	2 cut(s)	256, 902
BstENI	CCTNNNNNAGG	1 cut(s)	242
BstF5I	GGATG	7 cut(s)	646, 652, 1011, 1068, 1279, 1458, 1465
BstFNI	CGCG	3 cut(s)	258, 277, 314
BstH2I	RGCGCY	1 cut(s)	743
BstHHI	GCGC	2 cut(s)	742, 901
BstKTI	GATC	4 cut(s)	499, 934, 1238, 1399
BstMAI	GTCTC	3 cut(s)	160, 284, 836
BstMBI	GATC	4 cut(s)	496, 931, 1235, 1396
BstMWI	GCNNNNNNNGC	3 cut(s)	267, 483, 898
BstNSI	RCATGY	1 cut(s)	575
BstSCI	CCNGG	1 cut(s)	103
BstUI	CGCG	3 cut(s)	258, 277, 314
BstV1I	GCAGC	5 cut(s)	130, 741, 967, 1264, 1276
BstV2I	GAAGAC	1 cut(s)	676
BstX2I	RGATCY	2 cut(s)	931, 1235
BstYI	RGATCY	2 cut(s)	931, 1235
BsuI	GTATCC	1 cut(s)	1489
BsuRI	GGCC	8 cut(s)	108, 255, 261, 303, 405, 539, 907, 1149
BtgI	CCRYGG	2 cut(s)	256, 902
BtsCI	GGATG	7 cut(s)	646, 652, 1011, 1068, 1279, 1458, 1465
BtsIMutI	CAGTG	2 cut(s)	297, 1311
Cac8I	GCNNGC	5 cut(s)	123, 206, 316, 407, 488
CaiI	CAGNNNCTG	2 cut(s)	454, 983
CfoI	GCGC	2 cut(s)	742, 901
Cfr10I	RCCGGY	1 cut(s)	479
Cfr13I	GGNCC	6 cut(s)	107, 191, 253, 403, 442, 958
Cfr42I	CCGCGG	1 cut(s)	259
CseI	GACGC	2 cut(s)	259, 266
Csp6I	GTAC	1 cut(s)	824
CviAII	CATG	6 cut(s)	32, 572, 903, 1145, 1333, 1540
CviQI	GTAC	1 cut(s)	824
DdeI	CTNAG	6 cut(s)	615, 815, 963, 1211, 1239, 1427
DinI	GGCGCC	1 cut(s)	741
DpnI	GATC	4 cut(s)	498, 933, 1237, 1398
DpnII	GATC	4 cut(s)	496, 931, 1235, 1396
DriI	GACNNNNNGTC	1 cut(s)	680
EaeI	YGGCCR	3 cut(s)	259, 301, 537
Eam1104I	CTCTTC	2 cut(s)	52, 1131
Eam1105I	GACNNNNNGTC	1 cut(s)	680
EarI	CTCTTC	2 cut(s)	52, 1131
EciI	GGCGGA	1 cut(s)	854
Ecl136II	GAGCTC	1 cut(s)	472
Eco130I	CCWWGG	2 cut(s)	510, 902
Eco24I	GRGCYC	2 cut(s)	173, 474
Eco31I	GGTCTC	1 cut(s)	836
Eco32I	GATATC	1 cut(s)	37
Eco47I	GGWCC	3 cut(s)	191, 442, 958
Eco53kI	GAGCTC	1 cut(s)	472
Eco57I	CTGAAG	2 cut(s)	1005, 1152
Eco88I	CYCGRG	1 cut(s)	239
EcoICRI	GAGCTC	1 cut(s)	472
EcoNI	CCTNNNNNAGG	1 cut(s)	242
EcoRI	GAATTC	2 cut(s)	422, 1316
EcoRV	GATATC	1 cut(s)	37
EcoT14I	CCWWGG	2 cut(s)	510, 902
EcoT22I	ATGCAT	2 cut(s)	600, 1338
EcoT38I	GRGCYC	2 cut(s)	173, 474
EgeI	GGCGCC	1 cut(s)	741
EheI	GGCGCC	1 cut(s)	741
ErhI	CCWWGG	2 cut(s)	510, 902
Esp3I	CGTCTC	1 cut(s)	284
FaeI	CATG	6 cut(s)	35, 575, 906, 1148, 1336, 1543
FalI	AAGNNNNNCTT	2 cut(s)	867, 899
FaqI	GGGAC	3 cut(s)	18, 725, 1312
FatI	CATG	6 cut(s)	31, 571, 902, 1144, 1332, 1539
FauI	CCCGC	1 cut(s)	1397
FokI	GGATG	7 cut(s)	653, 659, 1018, 1075, 1286, 1465, 1472
FriOI	GRGCYC	2 cut(s)	173, 474
GlaI	GCGC	2 cut(s)	741, 900
GsaI	CCCAGC	3 cut(s)	141, 254, 1235
GsuI	CTGGAG	4 cut(s)	171, 410, 813, 1370
HaeII	RGCGCY	1 cut(s)	743
HaeIII	GGCC	8 cut(s)	108, 255, 261, 303, 405, 539, 907, 1149
HapII	CCGG	3 cut(s)	105, 480, 550
HgaI	GACGC	2 cut(s)	259, 266
HhaI	GCGC	2 cut(s)	742, 901
Hin1I	GRCGYC	2 cut(s)	270, 740
Hin1II	CATG	6 cut(s)	35, 575, 906, 1148, 1336, 1543
Hin6I	GCGC	2 cut(s)	740, 899
HinP1I	GCGC	2 cut(s)	740, 899
HincII	GTYRAC	1 cut(s)	951
HindII	GTYRAC	1 cut(s)	951
HindIII	AAGCTT	2 cut(s)	1023, 1241
HpaI	GTTAAC	1 cut(s)	951
HpaII	CCGG	3 cut(s)	105, 480, 550
HphI	GGTGA	4 cut(s)	54, 62, 1031, 1597
Hpy166II	GTNNAC	2 cut(s)	706, 951
Hpy188I	TCNGA	9 cut(s)	58, 191, 384, 501, 919, 1030, 1076, 1132, 1401
Hpy188III	TCNNGA	6 cut(s)	150, 241, 343, 389, 940, 992
Hpy8I	GTNNAC	2 cut(s)	706, 951
Hpy99I	CGWCG	1 cut(s)	221
HpyAV	CCTTC	4 cut(s)	238, 869, 918, 1348
HpyCH4III	ACNGT	2 cut(s)	1071, 1201
HpyCH4IV	ACGT	2 cut(s)	219, 780
HpyF10VI	GCNNNNNNNGC	3 cut(s)	267, 483, 898
HpyF3I	CTNAG	6 cut(s)	615, 815, 963, 1211, 1239, 1427
HpySE526I	ACGT	2 cut(s)	219, 780
Hsp92I	GRCGYC	2 cut(s)	270, 740
Hsp92II	CATG	6 cut(s)	35, 575, 906, 1148, 1336, 1543
HspAI	GCGC	2 cut(s)	740, 899
KasI	GGCGCC	1 cut(s)	739
KspAI	GTTAAC	1 cut(s)	951
KspI	CCGCGG	1 cut(s)	259
Kzo9I	GATC	4 cut(s)	496, 931, 1235, 1396
LmnI	GCTCC	4 cut(s)	130, 247, 391, 469
Lsp1109I	GCAGC	5 cut(s)	130, 741, 967, 1264, 1276
LweI	GCATC	6 cut(s)	585, 637, 910, 1006, 1264, 1345
MaeII	ACGT	2 cut(s)	219, 780
MaeIII	GTNAC	3 cut(s)	271, 343, 578
MalI	GATC	4 cut(s)	498, 933, 1237, 1398
MbiI	CCGCTC	1 cut(s)	1404
MboI	GATC	4 cut(s)	496, 931, 1235, 1396
MflI	RGATCY	2 cut(s)	931, 1235
MhlI	GDGCHC	3 cut(s)	173, 396, 474
MluCI	AATT	9 cut(s)	195, 223, 422, 619, 760, 867, 1316, 1519, 1554
MluI	ACGCGT	2 cut(s)	275, 312
Mly113I	GGCGCC	1 cut(s)	740
MlyI	GAGTC	4 cut(s)	162, 669, 804, 857
MmeI	TCCRAC	1 cut(s)	103
Mph1103I	ATGCAT	2 cut(s)	600, 1338
MroXI	GAANNNNTTC	2 cut(s)	1070, 1140
MseI	TTAA	2 cut(s)	398, 950
MslI	CAYNNNNRTG	1 cut(s)	30
MspA1I	CMGCKG	3 cut(s)	258, 980, 1267
MspI	CCGG	3 cut(s)	105, 480, 550
MspR9I	CCNGG	1 cut(s)	105
MvnI	CGCG	3 cut(s)	258, 277, 314
MwoI	GCNNNNNNNGC	3 cut(s)	267, 483, 898
NarI	GGCGCC	1 cut(s)	740
NciI	CCSGG	1 cut(s)	105
NcoI	CCATGG	1 cut(s)	902
NdeII	GATC	4 cut(s)	496, 931, 1235, 1396
NlaIII	CATG	6 cut(s)	35, 575, 906, 1148, 1336, 1543
NlaIV	GGNNCC	2 cut(s)	741, 960
NmuCI	GTSAC	3 cut(s)	271, 343, 578
NsiI	ATGCAT	2 cut(s)	600, 1338
NspI	RCATGY	1 cut(s)	575
PaeR7I	CTCGAG	1 cut(s)	239
PcsI	WCGNNNNNNNCGW	1 cut(s)	225
PdmI	GAANNNNTTC	2 cut(s)	1070, 1140
PfeI	GAWTC	5 cut(s)	59, 385, 451, 1141, 1515
PleI	GAGTC	4 cut(s)	161, 669, 803, 857
PluTI	GGCGCC	1 cut(s)	743
PpsI	GAGTC	4 cut(s)	161, 669, 803, 857
Psp124BI	GAGCTC	1 cut(s)	474
PspFI	CCCAGC	3 cut(s)	137, 250, 1231
PspN4I	GGNNCC	2 cut(s)	741, 960
PspPI	GGNCC	6 cut(s)	107, 191, 253, 403, 442, 958
PstNI	CAGNNNCTG	2 cut(s)	454, 983
PsuI	RGATCY	2 cut(s)	931, 1235
PvuII	CAGCTG	2 cut(s)	980, 1267
RsaI	GTAC	1 cut(s)	825
RsaNI	GTAC	1 cut(s)	824
RseI	CAYNNNNRTG	1 cut(s)	30
SacI	GAGCTC	1 cut(s)	474
SacII	CCGCGG	1 cut(s)	259
SaqAI	TTAA	2 cut(s)	398, 950
Sau3AI	GATC	4 cut(s)	496, 931, 1235, 1396
Sau96I	GGNCC	6 cut(s)	107, 191, 253, 403, 442, 958
SchI	GAGTC	4 cut(s)	162, 669, 804, 857
ScrFI	CCNGG	1 cut(s)	105
SduI	GDGCHC	3 cut(s)	173, 396, 474
SfaNI	GCATC	6 cut(s)	585, 637, 910, 1006, 1264, 1345
SfoI	GGCGCC	1 cut(s)	741
Sfr274I	CTCGAG	1 cut(s)	239
Sfr303I	CCGCGG	1 cut(s)	259
SgrAI	CRCCGGYG	1 cut(s)	479
SgrBI	CCGCGG	1 cut(s)	259
SinI	GGWCC	3 cut(s)	191, 442, 958
SlaI	CTCGAG	1 cut(s)	239
SmiMI	CAYNNNNRTG	1 cut(s)	30
SmlI	CTYRAG	2 cut(s)	239, 992
SmoI	CTYRAG	2 cut(s)	239, 992
Sse9I	AATT	9 cut(s)	195, 223, 422, 619, 760, 867, 1316, 1519, 1554
SspDI	GGCGCC	1 cut(s)	739
SstI	GAGCTC	1 cut(s)	474
StyD4I	CCNGG	1 cut(s)	103
StyI	CCWWGG	2 cut(s)	510, 902
TaaI	ACNGT	2 cut(s)	1071, 1201
TaiI	ACGT	2 cut(s)	222, 783
TaqI	TCGA	3 cut(s)	240, 690, 1339
TaqII	GACCGA	1 cut(s)	860
TasI	AATT	9 cut(s)	195, 223, 422, 619, 760, 867, 1316, 1519, 1554
TauI	GCSGC	5 cut(s)	258, 261, 486, 539, 926
TfiI	GAWTC	5 cut(s)	59, 385, 451, 1141, 1515
Tru1I	TTAA	2 cut(s)	398, 950
Tru9I	TTAA	2 cut(s)	398, 950
TscAI	CASTG	2 cut(s)	304, 1318
TseFI	GTSAC	3 cut(s)	271, 343, 578
TseI	GCWGC	5 cut(s)	118, 754, 980, 1264, 1277
Tsp45I	GTSAC	3 cut(s)	271, 343, 578
TspDTI	ATGAA	8 cut(s)	39, 676, 1022, 1079, 1097, 1133, 1309, 1491
TspGWI	ACGGA	1 cut(s)	217
TspRI	CASTG	2 cut(s)	304, 1318
VpaK11BI	GGWCC	3 cut(s)	191, 442, 958
XagI	CCTNNNNNAGG	1 cut(s)	242
XapI	RAATTY	4 cut(s)	223, 422, 619, 1316
XceI	RCATGY	1 cut(s)	575
XhoI	CTCGAG	1 cut(s)	239
XmnI	GAANNNNTTC	2 cut(s)	1070, 1140
Zsp2I	ATGCAT	2 cut(s)	600, 1338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.