Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0008188

Physical Location & Seq

Genomic Coordinates Reverse (-)

6460911 .. 6464349

Gene Structure 3439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011069

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGGACTCTGTTTCACAAAATCCCACACCCATGATATCCCAATCTCTTCATCATCAGAATCACCACCTCACCACTTCCAACAAACACAACCCAACAAAAAACCCGACCCGTTTCACCAGCCAGCTCCACCCAGACCCAGCCCCTACTCCGGAGGCTCTTTTGGCAAGAGCCTCTCGTCCTCCCAAATCGGACCAATTCTGGGCAAGCCTTACGCCGACGTAAATTCCGTTTACACCCTCGAGAAGGAGCTGGGCCGCGGCCAGTTCGGCGTCACGAGTCTCTGCACCGAGAAATCCACGGGCCGAAAATACGCGTGCAAGTCCATATCGTGCAAAAAACTCGTGACGAATAAGGACATTGAGGACATGCGGAGAGAGGTTCTGATTCTGGAGCACTTAACGGGCCAGCCCAATATAGTTGAATTCAAAGGTGCTTTTGAGGACCGCCAGAATCTGCATTTGATTATGGAGCTCTGCACCGGCGGCGAGCTTTTTGATAGGATTATTGCCAAGGGAAGCTACACCGAGCGTGAAGCGGCCAAGATTTTCCGGCAGATTGTGAATGTGGTGCATGTGTGTCACTTTATGGGAGTGATGCATAGGGATTTGAAGCCTGAGAATTTCTTGCTTGTAAGTAAGGACGAGGATGCACCGATAAAGGCCATTGATTTTGGTCTCTCTGTCTTCATCGAGCAAGGCAAAGTTTACAGGGACATTATTGGGAGTGCCTACTATGTGGCGCCAGAAGTGTTGCGGCGGAATTATGGGAAAGAGATAGATGTTTGGAGTGCTGGAGTCATCTTGTATATTCTTCTAAGTGGAGTACCTCCATTTTGGGCGGAGACCGAGAAAGGGATATTTGACTCAATTATAGAAGGAAAACTTGACTTGCATAGTGCGCCATGGCCTTCTATATCTGATGCGGCAAAGGATCTCATCAGGAAAATGTTAACAATGGACCCTAAGAAAAGGATTACAGCTGCTGAAGTTCTTGAGCATCATTGGATGAAGAAAGATGGTGAAGCATCTGACAAACCTATTGATAGTGCTGTGCTGATTAGGATGAAACAGTTCAGAGCAATGAATAAGTTGAAGAAACTTGCTCTAAAGGTCATAGCAGAAACGCTTTCTGAAGAAGAGATTCATGGCCTGAAACAAATGTTCAACAACATTGACACAGATGGTAGTGGTAATATCACAGTTGAAGAACTAAGAACTGGATTGTCAAGGCTGGGATCTAAGCTTACAGAAGCAGAAATAAAGCAGCTGATGGATGCTGCTGACATAGACAAAAATGGGACTATTGATTACACTGAATTCATTACTGCAACCATGCATCGACACAAACTGGAGAAGGAAGAAAACTTGCACAAGGCTTTCCTTTACTTTGACAAGGATCAAAGCGGGTTTATCACAAGAGATGAGCTAAGACAAGCAATGACTGAATATGGGATGGGGGATGAGGCTACGATAGATGAAGTCCTTGAAGATGTGGATACTGATAAAGATGGGAGAATCAATTATGAGGAGTTCGTAGCCATGATGACACGGGGAGTTGCAGATTACGATGATAAACCAGATAGGGTGATTGTTCTACCTGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0047484 GO:0048518 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080134 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901000 GO:1901002 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

535

Amino Acids

60.22

Weight (kDa)

5.66

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	78 - 336	6.1e-77	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	79 - 332	1.9e-27	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	384 - 444	1e-14	EF-hand domain pair
EF-hand_1	PF00036	384 - 410	5.2e-06	EF hand domain
EF-hand_6	PF13405	384 - 412	9.9e-06	EF-hand domain
EF-hand_5	PF13202	384 - 406	7.9e-06	EF hand
EF-hand_8	PF13833	396 - 443	2.4e-07	EF-hand domain pair
EF-hand_7	PF13499	453 - 516	3.5e-16	EF-hand domain pair
EF-hand_1	PF00036	456 - 482	1.2e-06	EF hand domain
EF-hand_6	PF13405	456 - 484	3.2e-07	EF-hand domain
EF-hand_8	PF13833	468 - 517	4.7e-06	EF-hand domain pair
EF-hand_1	PF00036	491 - 517	2.1e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76040 AT1G76040 AT1G76040 AT1G76040
fragaria_vesca	FvH4_2g38010 FvH4_2g38010
malus_domestica	MD15G1007200.v1.1
prunus_persica	Prupe.1G360100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0303601
rosa_laevigata	RLG00000011069 RLG00000011734
rosa_multiflora	Rmu_ssc0000114.1_g000023
rosa_roxburghii	Rroxscaffold_7G00164590
rosa_rugosa	Rorug06G0257300 Rorug06G0322800
rosa_samantha	Rh6AG437100 Rh6BG377600 Rh6BG377700 Rh6BG466100 Rh6CG449200 Rh6DG370300 Rh6DG435900
rosa_wichuraiana	Rw6G037840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	739
AccII	CGCG	2 cut(s)	258, 314
AccIII	TCCGGA	1 cut(s)	149
AclWI	GGATC	3 cut(s)	939, 1243, 1404
AcoI	YGGCCR	2 cut(s)	259, 537
AcsI	RAATTY	4 cut(s)	223, 422, 619, 1316
AcuI	CTGAAG	2 cut(s)	1005, 1152
AcyI	GRCGYC	2 cut(s)	270, 740
AfaI	GTAC	1 cut(s)	825
AfiI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
AflIII	ACRYGT	1 cut(s)	312
AgsI	TTSAA	7 cut(s)	422, 427, 610, 1093, 1165, 1205, 1487
AluBI	AGCT	9 cut(s)	125, 250, 472, 490, 519, 980, 1243, 1267, 1426
AluI	AGCT	9 cut(s)	125, 250, 472, 490, 519, 980, 1243, 1267, 1426
Alw21I	GWGCWC	2 cut(s)	396, 474
Alw26I	GTCTC	3 cut(s)	284, 680, 836
AlwI	GGATC	3 cut(s)	939, 1243, 1404
AlwNI	CAGNNNCTG	2 cut(s)	454, 983
Ama87I	CYCGRG	1 cut(s)	239
Aor13HI	TCCGGA	1 cut(s)	149
AoxI	GGCC	8 cut(s)	253, 259, 301, 403, 537, 660, 905, 1147
ApeKI	GCWGC	3 cut(s)	980, 1264, 1277
ApoI	RAATTY	4 cut(s)	223, 422, 619, 1316
Asp700I	GAANNNNTTC	2 cut(s)	1070, 1140
AspLEI	GCGC	2 cut(s)	742, 901
AspS9I	GGNCC	6 cut(s)	191, 253, 301, 403, 442, 958
AsuHPI	GGTGA	5 cut(s)	54, 62, 107, 1031, 1597
AvaI	CYCGRG	1 cut(s)	239
AvaII	GGWCC	3 cut(s)	191, 442, 958
BanI	GGYRCC	1 cut(s)	739
BanII	GRGCYC	1 cut(s)	474
BauI	CACGAG	2 cut(s)	274, 341
BbsI	GAAGAC	1 cut(s)	676
Bbv12I	GWGCWC	2 cut(s)	396, 474
BbvI	GCAGC	3 cut(s)	967, 1264, 1276
BccI	CCATC	5 cut(s)	1010, 1175, 1264, 1447, 1502
BcgI	CGANNNNNNTGC	2 cut(s)	322, 356
BciVI	GTATCC	1 cut(s)	1489
BcoDI	GTCTC	3 cut(s)	284, 680, 836
BfoI	RGCGCY	1 cut(s)	743
BfuI	GTATCC	1 cut(s)	1489
BglI	GCCNNNNNGGC	1 cut(s)	267
BisI	GCNGC	9 cut(s)	256, 259, 484, 537, 755, 924, 981, 1265, 1278
BlsI	GCNGC	9 cut(s)	257, 260, 485, 538, 756, 925, 982, 1266, 1279
Bme18I	GGWCC	3 cut(s)	191, 442, 958
BmeT110I	CYCGRG	1 cut(s)	239
BmgT120I	GGNCC	6 cut(s)	191, 253, 301, 403, 442, 958
BmiI	GGNNCC	2 cut(s)	741, 960
BmsI	GCATC	7 cut(s)	585, 637, 910, 1006, 1034, 1264, 1345
BpiI	GAAGAC	1 cut(s)	676
BpmI	CTGGAG	3 cut(s)	410, 813, 1370
BpuEI	CTTGAG	1 cut(s)	1013
BsaHI	GRCGYC	2 cut(s)	270, 740
BsaI	GGTCTC	2 cut(s)	680, 836
BsaJI	CCNNGG	4 cut(s)	256, 297, 510, 902
BsaWI	WCCGGW	1 cut(s)	149
Bsc4I	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
Bse118I	RCCGGY	1 cut(s)	479
Bse1I	ACTGG	3 cut(s)	262, 1222, 1353
Bse3DI	GCAATG	2 cut(s)	1086, 1443
BseAI	TCCGGA	1 cut(s)	149
BseDI	CCNNGG	4 cut(s)	256, 297, 510, 902
BseGI	GGATG	6 cut(s)	652, 1011, 1068, 1279, 1458, 1465
BseLI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
BseMI	GCAATG	2 cut(s)	1086, 1443
BseMII	CTCAG	1 cut(s)	606
BseNI	ACTGG	3 cut(s)	262, 1222, 1353
BseRI	GAGGAG	1 cut(s)	1541
BseXI	GCAGC	3 cut(s)	967, 1264, 1276
BseYI	CCCAGC	3 cut(s)	137, 250, 1231
BsgI	GTGCAG	2 cut(s)	268, 460
Bsh1236I	CGCG	2 cut(s)	258, 314
BshFI	GGCC	8 cut(s)	255, 261, 303, 405, 539, 662, 907, 1149
BshNI	GGYRCC	1 cut(s)	739
BsiHKAI	GWGCWC	2 cut(s)	396, 474
BsiHKCI	CYCGRG	1 cut(s)	239
BsiSI	CCGG	3 cut(s)	150, 480, 550
BslFI	GGGAC	3 cut(s)	18, 725, 1312
BslI	CCNNNNNNNGG	4 cut(s)	149, 200, 244, 852
BsmAI	GTCTC	3 cut(s)	284, 680, 836
BsmFI	GGGAC	3 cut(s)	18, 725, 1312
BsnI	GGCC	8 cut(s)	255, 261, 303, 405, 539, 662, 907, 1149
Bso31I	GGTCTC	2 cut(s)	680, 836
BsoBI	CYCGRG	1 cut(s)	239
Bsp1286I	GDGCHC	2 cut(s)	396, 474
Bsp13I	TCCGGA	1 cut(s)	149
Bsp143I	GATC	3 cut(s)	931, 1235, 1396
Bsp19I	CCATGG	1 cut(s)	902
BspANI	GGCC	8 cut(s)	255, 261, 303, 405, 539, 662, 907, 1149
BspCNI	CTCAG	1 cut(s)	607
BspEI	TCCGGA	1 cut(s)	149
BspFNI	CGCG	2 cut(s)	258, 314
BspLI	GGNNCC	2 cut(s)	741, 960
BspPI	GGATC	3 cut(s)	939, 1243, 1404
BspT107I	GGYRCC	1 cut(s)	739
BspTNI	GGTCTC	2 cut(s)	680, 836
BsrDI	GCAATG	2 cut(s)	1086, 1443
BsrFI	RCCGGY	1 cut(s)	479
BsrI	ACTGG	3 cut(s)	262, 1222, 1353
BssAI	RCCGGY	1 cut(s)	479
BssECI	CCNNGG	4 cut(s)	256, 297, 510, 902
BssMI	GATC	3 cut(s)	931, 1235, 1396
BssNI	GRCGYC	2 cut(s)	270, 740
BssSI	CACGAG	2 cut(s)	274, 341
BssT1I	CCWWGG	2 cut(s)	510, 902
Bst2BI	CACGAG	2 cut(s)	274, 341
Bst4CI	ACNGT	2 cut(s)	1071, 1201
Bst6I	CTCTTC	2 cut(s)	52, 1131
BstACI	GRCGYC	2 cut(s)	270, 740
BstC8I	GCNNGC	5 cut(s)	123, 206, 316, 407, 488
BstDEI	CTNAG	6 cut(s)	615, 815, 963, 1211, 1239, 1427
BstDSI	CCRYGG	3 cut(s)	256, 297, 902
BstENI	CCTNNNNNAGG	1 cut(s)	242
BstF5I	GGATG	6 cut(s)	652, 1011, 1068, 1279, 1458, 1465
BstFNI	CGCG	2 cut(s)	258, 314
BstH2I	RGCGCY	1 cut(s)	743
BstHHI	GCGC	2 cut(s)	742, 901
BstKTI	GATC	3 cut(s)	934, 1238, 1399
BstMAI	GTCTC	3 cut(s)	284, 680, 836
BstMBI	GATC	3 cut(s)	931, 1235, 1396
BstMWI	GCNNNNNNNGC	4 cut(s)	162, 267, 483, 898
BstNSI	RCATGY	2 cut(s)	370, 575
BstUI	CGCG	2 cut(s)	258, 314
BstV1I	GCAGC	3 cut(s)	967, 1264, 1276
BstV2I	GAAGAC	1 cut(s)	676
BstX2I	RGATCY	2 cut(s)	931, 1235
BstYI	RGATCY	2 cut(s)	931, 1235
BsuI	GTATCC	1 cut(s)	1489
BsuRI	GGCC	8 cut(s)	255, 261, 303, 405, 539, 662, 907, 1149
BtgI	CCRYGG	3 cut(s)	256, 297, 902
BtsCI	GGATG	6 cut(s)	652, 1011, 1068, 1279, 1458, 1465
BtsIMutI	CAGTG	1 cut(s)	1311
Cac8I	GCNNGC	5 cut(s)	123, 206, 316, 407, 488
CaiI	CAGNNNCTG	2 cut(s)	454, 983
CfoI	GCGC	2 cut(s)	742, 901
Cfr10I	RCCGGY	1 cut(s)	479
Cfr13I	GGNCC	6 cut(s)	191, 253, 301, 403, 442, 958
Cfr42I	CCGCGG	1 cut(s)	259
CseI	GACGC	1 cut(s)	259
Csp6I	GTAC	1 cut(s)	824
CviAII	CATG	7 cut(s)	32, 367, 572, 903, 1145, 1333, 1540
CviQI	GTAC	1 cut(s)	824
DdeI	CTNAG	6 cut(s)	615, 815, 963, 1211, 1239, 1427
DinI	GGCGCC	1 cut(s)	741
DpnI	GATC	3 cut(s)	933, 1237, 1398
DpnII	GATC	3 cut(s)	931, 1235, 1396
EaeI	YGGCCR	2 cut(s)	259, 537
Eam1104I	CTCTTC	2 cut(s)	52, 1131
EarI	CTCTTC	2 cut(s)	52, 1131
EciI	GGCGGA	2 cut(s)	772, 854
Ecl136II	GAGCTC	1 cut(s)	472
Eco130I	CCWWGG	2 cut(s)	510, 902
Eco24I	GRGCYC	1 cut(s)	474
Eco31I	GGTCTC	2 cut(s)	680, 836
Eco32I	GATATC	1 cut(s)	37
Eco47I	GGWCC	3 cut(s)	191, 442, 958
Eco53kI	GAGCTC	1 cut(s)	472
Eco57I	CTGAAG	2 cut(s)	1005, 1152
Eco88I	CYCGRG	1 cut(s)	239
EcoICRI	GAGCTC	1 cut(s)	472
EcoNI	CCTNNNNNAGG	1 cut(s)	242
EcoRI	GAATTC	2 cut(s)	422, 1316
EcoRV	GATATC	1 cut(s)	37
EcoT14I	CCWWGG	2 cut(s)	510, 902
EcoT22I	ATGCAT	2 cut(s)	600, 1338
EcoT38I	GRGCYC	1 cut(s)	474
EgeI	GGCGCC	1 cut(s)	741
EheI	GGCGCC	1 cut(s)	741
ErhI	CCWWGG	2 cut(s)	510, 902
FaeI	CATG	7 cut(s)	35, 370, 575, 906, 1148, 1336, 1543
FalI	AAGNNNNNCTT	2 cut(s)	867, 899
FaqI	GGGAC	3 cut(s)	18, 725, 1312
FatI	CATG	7 cut(s)	31, 366, 571, 902, 1144, 1332, 1539
FauI	CCCGC	1 cut(s)	1397
Fnu4HI	GCNGC	9 cut(s)	256, 259, 484, 537, 755, 924, 981, 1265, 1278
FokI	GGATG	6 cut(s)	659, 1018, 1075, 1286, 1465, 1472
FriOI	GRGCYC	1 cut(s)	474
Fsp4HI	GCNGC	9 cut(s)	256, 259, 484, 537, 755, 924, 981, 1265, 1278
GlaI	GCGC	2 cut(s)	741, 900
GluI	GCNGC	9 cut(s)	256, 259, 484, 537, 755, 924, 981, 1265, 1278
GsaI	CCCAGC	3 cut(s)	141, 254, 1235
GsuI	CTGGAG	3 cut(s)	410, 813, 1370
HaeII	RGCGCY	1 cut(s)	743
HaeIII	GGCC	8 cut(s)	255, 261, 303, 405, 539, 662, 907, 1149
HapII	CCGG	3 cut(s)	150, 480, 550
HgaI	GACGC	1 cut(s)	259
HhaI	GCGC	2 cut(s)	742, 901
Hin1I	GRCGYC	2 cut(s)	270, 740
Hin1II	CATG	7 cut(s)	35, 370, 575, 906, 1148, 1336, 1543
Hin6I	GCGC	2 cut(s)	740, 899
HinP1I	GCGC	2 cut(s)	740, 899
HincII	GTYRAC	1 cut(s)	951
HindII	GTYRAC	1 cut(s)	951
HindIII	AAGCTT	1 cut(s)	1241
HinfI	GANTC	9 cut(s)	6, 59, 277, 385, 451, 795, 863, 1141, 1515
HpaI	GTTAAC	1 cut(s)	951
HpaII	CCGG	3 cut(s)	150, 480, 550
HphI	GGTGA	5 cut(s)	54, 62, 107, 1031, 1597
Hpy166II	GTNNAC	3 cut(s)	232, 706, 951
Hpy188I	TCNGA	7 cut(s)	58, 191, 384, 919, 1030, 1076, 1132
Hpy188III	TCNNGA	7 cut(s)	150, 241, 274, 343, 389, 940, 992
Hpy8I	GTNNAC	3 cut(s)	232, 706, 951
Hpy99I	CGWCG	1 cut(s)	221
HpyAV	CCTTC	4 cut(s)	238, 869, 918, 1348
HpyCH4III	ACNGT	2 cut(s)	1071, 1201
HpyCH4IV	ACGT	1 cut(s)	219
HpyF10VI	GCNNNNNNNGC	4 cut(s)	162, 267, 483, 898
HpyF3I	CTNAG	6 cut(s)	615, 815, 963, 1211, 1239, 1427
HpySE526I	ACGT	1 cut(s)	219
Hsp92I	GRCGYC	2 cut(s)	270, 740
Hsp92II	CATG	7 cut(s)	35, 370, 575, 906, 1148, 1336, 1543
HspAI	GCGC	2 cut(s)	740, 899
KasI	GGCGCC	1 cut(s)	739
Kpn2I	TCCGGA	1 cut(s)	149
KspAI	GTTAAC	1 cut(s)	951
KspI	CCGCGG	1 cut(s)	259
Kzo9I	GATC	3 cut(s)	931, 1235, 1396
LmnI	GCTCC	4 cut(s)	130, 247, 391, 469
Lsp1109I	GCAGC	3 cut(s)	967, 1264, 1276
LweI	GCATC	7 cut(s)	585, 637, 910, 1006, 1034, 1264, 1345
MaeII	ACGT	1 cut(s)	219
MaeIII	GTNAC	3 cut(s)	271, 343, 578
MalI	GATC	3 cut(s)	933, 1237, 1398
MboI	GATC	3 cut(s)	931, 1235, 1396
MflI	RGATCY	2 cut(s)	931, 1235
MhlI	GDGCHC	2 cut(s)	396, 474
MluCI	AATT	8 cut(s)	195, 223, 422, 619, 760, 867, 1316, 1519
MluI	ACGCGT	1 cut(s)	312
Mly113I	GGCGCC	1 cut(s)	740
MlyI	GAGTC	3 cut(s)	286, 804, 857
MmeI	TCCRAC	1 cut(s)	103
Mph1103I	ATGCAT	2 cut(s)	600, 1338
MroI	TCCGGA	1 cut(s)	149
MroXI	GAANNNNTTC	2 cut(s)	1070, 1140
MseI	TTAA	2 cut(s)	398, 950
MslI	CAYNNNNRTG	1 cut(s)	30
MspA1I	CMGCKG	3 cut(s)	258, 980, 1267
MspI	CCGG	3 cut(s)	150, 480, 550
MvnI	CGCG	2 cut(s)	258, 314
MwoI	GCNNNNNNNGC	4 cut(s)	162, 267, 483, 898
NarI	GGCGCC	1 cut(s)	740
NcoI	CCATGG	1 cut(s)	902
NdeII	GATC	3 cut(s)	931, 1235, 1396
NlaIII	CATG	7 cut(s)	35, 370, 575, 906, 1148, 1336, 1543
NlaIV	GGNNCC	2 cut(s)	741, 960
NmuCI	GTSAC	3 cut(s)	271, 343, 578
NsiI	ATGCAT	2 cut(s)	600, 1338
NspI	RCATGY	2 cut(s)	370, 575
PaeR7I	CTCGAG	1 cut(s)	239
PcsI	WCGNNNNNNNCGW	1 cut(s)	225
PdmI	GAANNNNTTC	2 cut(s)	1070, 1140
PfeI	GAWTC	5 cut(s)	59, 385, 451, 1141, 1515
PkrI	GCNGC	9 cut(s)	257, 260, 485, 538, 756, 925, 982, 1266, 1279
PleI	GAGTC	3 cut(s)	285, 803, 857
PluTI	GGCGCC	1 cut(s)	743
PpsI	GAGTC	3 cut(s)	285, 803, 857
Psp124BI	GAGCTC	1 cut(s)	474
PspFI	CCCAGC	3 cut(s)	137, 250, 1231
PspN4I	GGNNCC	2 cut(s)	741, 960
PspPI	GGNCC	6 cut(s)	191, 253, 301, 403, 442, 958
PstNI	CAGNNNCTG	2 cut(s)	454, 983
PsuI	RGATCY	2 cut(s)	931, 1235
PvuII	CAGCTG	2 cut(s)	980, 1267
RsaI	GTAC	1 cut(s)	825
RsaNI	GTAC	1 cut(s)	824
RseI	CAYNNNNRTG	1 cut(s)	30
SacI	GAGCTC	1 cut(s)	474
SacII	CCGCGG	1 cut(s)	259
SaqAI	TTAA	2 cut(s)	398, 950
SatI	GCNGC	9 cut(s)	256, 259, 484, 537, 755, 924, 981, 1265, 1278
Sau3AI	GATC	3 cut(s)	931, 1235, 1396
Sau96I	GGNCC	6 cut(s)	191, 253, 301, 403, 442, 958
SchI	GAGTC	3 cut(s)	286, 804, 857
SduI	GDGCHC	2 cut(s)	396, 474
SfaNI	GCATC	7 cut(s)	585, 637, 910, 1006, 1034, 1264, 1345
SfoI	GGCGCC	1 cut(s)	741
Sfr274I	CTCGAG	1 cut(s)	239
Sfr303I	CCGCGG	1 cut(s)	259
SgrAI	CRCCGGYG	1 cut(s)	479
SgrBI	CCGCGG	1 cut(s)	259
SinI	GGWCC	3 cut(s)	191, 442, 958
SlaI	CTCGAG	1 cut(s)	239
SmiMI	CAYNNNNRTG	1 cut(s)	30
SmlI	CTYRAG	2 cut(s)	239, 992
SmoI	CTYRAG	2 cut(s)	239, 992
Sse9I	AATT	8 cut(s)	195, 223, 422, 619, 760, 867, 1316, 1519
SspDI	GGCGCC	1 cut(s)	739
SstI	GAGCTC	1 cut(s)	474
StyI	CCWWGG	2 cut(s)	510, 902
TaaI	ACNGT	2 cut(s)	1071, 1201
TaiI	ACGT	1 cut(s)	222
TaqI	TCGA	3 cut(s)	240, 690, 1339
TaqII	GACCGA	1 cut(s)	860
TasI	AATT	8 cut(s)	195, 223, 422, 619, 760, 867, 1316, 1519
TauI	GCSGC	6 cut(s)	258, 261, 486, 539, 757, 926
TfiI	GAWTC	5 cut(s)	59, 385, 451, 1141, 1515
Tru1I	TTAA	2 cut(s)	398, 950
Tru9I	TTAA	2 cut(s)	398, 950
TscAI	CASTG	1 cut(s)	1318
TseFI	GTSAC	3 cut(s)	271, 343, 578
TseI	GCWGC	3 cut(s)	980, 1264, 1277
Tsp45I	GTSAC	3 cut(s)	271, 343, 578
TspDTI	ATGAA	8 cut(s)	39, 676, 1022, 1079, 1097, 1133, 1309, 1491
TspGWI	ACGGA	1 cut(s)	217
TspRI	CASTG	1 cut(s)	1318
VpaK11BI	GGWCC	3 cut(s)	191, 442, 958
XagI	CCTNNNNNAGG	1 cut(s)	242
XapI	RAATTY	4 cut(s)	223, 422, 619, 1316
XceI	RCATGY	2 cut(s)	370, 575
XhoI	CTCGAG	1 cut(s)	239
XmnI	GAANNNNTTC	2 cut(s)	1070, 1140
Zsp2I	ATGCAT	2 cut(s)	600, 1338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.