Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0009780

Physical Location & Seq

Genomic Coordinates Forward (+)

33886939 .. 33889868

Gene Structure 2930 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G372000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGAGGAAGGTAACAGGGAGATTGAACAGTGCTGGGCTTGTAGGTATGTTACTGGTTGTCCTGGAGGTCTGTGAGGGTGGGATAACAAGTAGTTATGTTAGAAATGATGACTTGTCCCTTGATATGCCTTTAGACAGTGATGTGTTCCAAGTGCCTCCCGGATATAATGCCCCTCAGCAGGTTCATATAACACAAGGAGATCATGAGGGGAGGGGTGTGATTGTCTCTTGGGTCACTCCAGATGAACCTGGTTCAAGTACAGTGCTTTACTGGGCAGAAAATAATACCAACCTCAAAAACCAAGCTCAAGGCACTCTTCTCACTTACCACTACTTCAATTACATTTCTGGTTACATTCATCACTGCACCATTCACAATTTGGAGTTTGACACCAAATACTACTATGAAGTCGGGATTGGTAATACCACGCGGCGGTTTTGGTTCACAACCCCTCCTGGCGTTGGTCCTGATGTTGCTTATACGTTTGGCCTCATAGGGGATCTTGGTCAAACTCACGATTCAAATCGAACACTTACCCATTATGAATTGAACCCAACAAAAGGGCAGACGGTATTGTTTGTTGGGGACCTCTCTTATGCAGATGATTATCCGTTTCATGACAATAACAGGTGGGATACATGGGGGAGGTTCACAGAGAGAAATGCTGCTTATCAACCCTGGATATGGACTGCAGGAAACCACGAAATCGATTTTGTTCCTGAACTTGGTGAAAGCAAACCCTTCAAACCCTACACAAACCGGTATTTTGTTCCATACGAAGCTTCACATAGTACATCTCCTCTCTGGTACTCCATCAAGAGAGCTTCAGCATATATCATAGTCTTGTCCTCTTACTCCGCATATGGGAAATATACTCCTCAATACAAGTGGCTTGAAAAGGAGCTGCCAAAAGTGAACAGAACAGAGACACCATGGCTTATTGTTCTTATGCATTCTCCACTATATAATAGCTATGCACATCACTATATGGAAGGAGAATCCATGAGAGTGATGTACGAGCAATGGTTTGTCAAGTACAAAGTAGACATTATCTTTGCTGGTCATGTTCATGCCTATGAAAGATCCGAGCGGATATCAAATATTGCGTACAACATTGTGAATGGACTGTGCAGCCCTATAAGTGACGAATCAGCCCCAGTTTACATAACCATTGGAGATGGAGGAAATCTAGAAGGATTGGTTACTGAAATGACAGAACCGCAGCCAAGCTACTCAGCTTTCCGGGAAGCTAGCTTTGGTCATGGGATTTTCGACATAAAAAACAGAAGTCATGCATTTTTCAGTTGGCATCGGAATCAAGATGGGTATGCAGTAGAAGCTGATTCTCTATGGTTGAAAAACAGATACTGGAAATCTCTGGAAGAGCAGCTCCTAGCCGCCATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006793 GO:0006796 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009505 GO:0009605 GO:0009987 GO:0009991 GO:0016036 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0030312 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0042578 GO:0042594 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0071496 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

469

Amino Acids

53.69

Weight (kDa)

5.59

Isoelectric Point (pI)

36.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009780)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52940 AT2G27190
fragaria_vesca	FvH4_2g38890 FvH4_2g38890 FvH4_2g38890 FvH4_2g38890 FvH4_2g38890 FvH4_2g38890
malus_domestica	MD15G1020000.v1.1
prunus_persica	Prupe.1G372000_v2.0.a1
pyrus_communis	pycom15g01660
rosa_chinensis	RchiOBHm_Chr6g0301991
rosa_laevigata	RLG00000011210
rosa_multiflora	Rmu_sc0006892.1_g000004
rosa_roxburghii	Rroxscaffold_7G00166210
rosa_rugosa	Rorug06G0310900
rosa_samantha	Rh6AG423400 Rh6BG430100 Rh6CG436500 Rh6DG423500
rosa_wichuraiana	Rw6G036680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	169
AccBSI	CCGCTC	1 cut(s)	1090
AccI	GTMKAC	1 cut(s)	1044
AccII	CGCG	1 cut(s)	430
AciI	CCGC	6 cut(s)	430, 433, 858, 1090, 1220, 1398
AclWI	GGATC	2 cut(s)	507, 1077
AcuI	CTGAAG	1 cut(s)	810
AfaI	GTAC	6 cut(s)	259, 793, 809, 1016, 1037, 1109
AfiI	CCNNNNNNNGG	8 cut(s)	178, 432, 461, 496, 560, 684, 725, 864
AgeI	ACCGGT	1 cut(s)	759
AgsI	TTSAA	8 cut(s)	25, 255, 337, 522, 550, 745, 896, 1357
AjnI	CCWGG	4 cut(s)	60, 247, 454, 677
AjuI	GAANNNNNNNTTGG	4 cut(s)	399, 431, 1239, 1271
Alw26I	GTCTC	2 cut(s)	229, 920
AlwI	GGATC	2 cut(s)	507, 1077
AlwNI	CAGNNNCTG	1 cut(s)	1368
AoxI	GGCC	1 cut(s)	487
ApeKI	GCWGC	5 cut(s)	665, 904, 1131, 1222, 1387
ArsI	GACNNNNNNTTYG	2 cut(s)	1037, 1069
AsiGI	ACCGGT	1 cut(s)	759
AspS9I	GGNCC	2 cut(s)	464, 586
AsuC2I	CCSGG	2 cut(s)	159, 1244
AsuHPI	GGTGA	1 cut(s)	740
AsuNHI	GCTAGC	1 cut(s)	1250
AvaII	GGWCC	2 cut(s)	464, 586
BbvCI	CCTCAGC	1 cut(s)	174
BbvI	GCAGC	5 cut(s)	652, 891, 1143, 1234, 1399
BccI	CCATC	3 cut(s)	821, 1172, 1316
BciT130I	CCWGG	4 cut(s)	62, 249, 456, 679
BciVI	GTATCC	1 cut(s)	628
BcnI	CCSGG	2 cut(s)	159, 1244
BcoDI	GTCTC	2 cut(s)	229, 920
BfaI	CTAG	3 cut(s)	1190, 1251, 1394
BfmI	CTRYAG	1 cut(s)	690
BfuAI	ACCTGC	1 cut(s)	169
BfuI	GTATCC	1 cut(s)	628
BisI	GCNGC	7 cut(s)	431, 666, 905, 1132, 1223, 1388, 1398
BlsI	GCNGC	7 cut(s)	432, 667, 906, 1133, 1224, 1389, 1399
Bme1390I	CCNGG	6 cut(s)	62, 159, 249, 456, 679, 1244
Bme18I	GGWCC	2 cut(s)	464, 586
BmgT120I	GGNCC	2 cut(s)	464, 586
BmiI	GGNNCC	1 cut(s)	587
BmrFI	CCNGG	6 cut(s)	62, 159, 249, 456, 679, 1244
BmrI	ACTGGG	2 cut(s)	280, 1151
BmsI	GCATC	1 cut(s)	1318
BmtI	GCTAGC	1 cut(s)	1254
BmuI	ACTGGG	2 cut(s)	280, 1151
BpmI	CTGGAG	2 cut(s)	83, 222
Bpu10I	CCTNAGC	1 cut(s)	174
BpuEI	CTTGAG	1 cut(s)	291
BpuMI	CCSGG	2 cut(s)	159, 1244
Bsa29I	ATCGAT	1 cut(s)	708
BsaBI	GATNNNNATC	2 cut(s)	522, 606
BsaJI	CCNNGG	2 cut(s)	677, 932
BsaWI	WCCGGW	1 cut(s)	759
BsaXI	ACNNNNNCTCC	2 cut(s)	436, 466
Bsc4I	CCNNNNNNNGG	8 cut(s)	178, 432, 461, 496, 560, 684, 725, 864
Bse118I	RCCGGY	1 cut(s)	759
Bse1I	ACTGG	4 cut(s)	57, 275, 1157, 1373
Bse3DI	GCAATG	1 cut(s)	1028
Bse8I	GATNNNNATC	2 cut(s)	522, 606
BseBI	CCWGG	4 cut(s)	62, 249, 456, 679
BseCI	ATCGAT	1 cut(s)	708
BseDI	CCNNGG	2 cut(s)	677, 932
BseJI	GATNNNNATC	2 cut(s)	522, 606
BseLI	CCNNNNNNNGG	8 cut(s)	178, 432, 461, 496, 560, 684, 725, 864
BseMI	GCAATG	1 cut(s)	1028
BseMII	CTCAG	2 cut(s)	188, 1248
BseNI	ACTGG	4 cut(s)	57, 275, 1157, 1373
BseRI	GAGGAG	2 cut(s)	789, 867
BseXI	GCAGC	5 cut(s)	652, 891, 1143, 1234, 1399
BseYI	CCCAGC	1 cut(s)	32
BsgI	GTGCAG	2 cut(s)	349, 1150
Bsh1236I	CGCG	1 cut(s)	430
BshFI	GGCC	1 cut(s)	489
BshTI	ACCGGT	1 cut(s)	759
BshVI	ATCGAT	1 cut(s)	708
BsiSI	CCGG	3 cut(s)	159, 760, 1243
BslFI	GGGAC	2 cut(s)	100, 599
BslI	CCNNNNNNNGG	8 cut(s)	178, 432, 461, 496, 560, 684, 725, 864
BsmAI	GTCTC	2 cut(s)	229, 920
BsmFI	GGGAC	2 cut(s)	100, 599
BsmI	GAATGC	1 cut(s)	952
BsnI	GGCC	1 cut(s)	489
Bsp143I	GATC	3 cut(s)	199, 499, 1082
Bsp19I	CCATGG	1 cut(s)	932
BspACI	CCGC	6 cut(s)	430, 433, 858, 1090, 1220, 1398
BspANI	GGCC	1 cut(s)	489
BspCNI	CTCAG	2 cut(s)	187, 1247
BspDI	ATCGAT	1 cut(s)	708
BspFNI	CGCG	1 cut(s)	430
BspHI	TCATGA	2 cut(s)	202, 616
BspLI	GGNNCC	1 cut(s)	587
BspMAI	CTGCAG	1 cut(s)	694
BspMI	ACCTGC	1 cut(s)	169
BspOI	GCTAGC	1 cut(s)	1254
BspPI	GGATC	2 cut(s)	507, 1077
BspQI	GCTCTTC	1 cut(s)	1377
BsrBI	CCGCTC	1 cut(s)	1090
BsrDI	GCAATG	1 cut(s)	1028
BsrFI	RCCGGY	1 cut(s)	759
BsrI	ACTGG	4 cut(s)	57, 275, 1157, 1373
BssAI	RCCGGY	1 cut(s)	759
BssECI	CCNNGG	2 cut(s)	677, 932
BssMI	GATC	3 cut(s)	199, 499, 1082
BssT1I	CCWWGG	1 cut(s)	932
Bst2UI	CCWGG	4 cut(s)	62, 249, 456, 679
Bst4CI	ACNGT	5 cut(s)	29, 137, 262, 571, 1128
Bst6I	CTCTTC	2 cut(s)	321, 1377
BstC8I	GCNNGC	1 cut(s)	1252
BstDEI	CTNAG	2 cut(s)	174, 1234
BstDSI	CCRYGG	1 cut(s)	932
BstFNI	CGCG	1 cut(s)	430
BstKTI	GATC	3 cut(s)	202, 502, 1085
BstMAI	GTCTC	2 cut(s)	229, 920
BstMBI	GATC	3 cut(s)	199, 499, 1082
BstMWI	GCNNNNNNNGC	1 cut(s)	1337
BstNI	CCWGG	4 cut(s)	62, 249, 456, 679
BstSCI	CCNGG	6 cut(s)	60, 157, 247, 454, 677, 1242
BstSFI	CTRYAG	1 cut(s)	690
BstUI	CGCG	1 cut(s)	430
BstV1I	GCAGC	5 cut(s)	652, 891, 1143, 1234, 1399
BstX2I	RGATCY	2 cut(s)	499, 1082
BstYI	RGATCY	2 cut(s)	499, 1082
Bsu15I	ATCGAT	1 cut(s)	708
BsuI	GTATCC	1 cut(s)	628
BsuRI	GGCC	1 cut(s)	489
BsuTUI	ATCGAT	1 cut(s)	708
BtgI	CCRYGG	1 cut(s)	932
BtsI	GCAGTG	1 cut(s)	361
BtsIMutI	CAGTG	4 cut(s)	34, 142, 267, 361
BveI	ACCTGC	1 cut(s)	169
Cac8I	GCNNGC	1 cut(s)	1252
CaiI	CAGNNNCTG	1 cut(s)	1368
CciI	TCATGA	2 cut(s)	202, 616
Cfr10I	RCCGGY	1 cut(s)	759
Cfr13I	GGNCC	2 cut(s)	464, 586
ClaI	ATCGAT	1 cut(s)	708
CsiI	ACCWGGT	1 cut(s)	247
Csp6I	GTAC	6 cut(s)	258, 792, 808, 1015, 1036, 1108
CspAI	ACCGGT	1 cut(s)	759
CspCI	CAANNNNNGTGG	2 cut(s)	869, 904
CviQI	GTAC	6 cut(s)	258, 792, 808, 1015, 1036, 1108
DdeI	CTNAG	2 cut(s)	174, 1234
DpnI	GATC	3 cut(s)	201, 501, 1084
DpnII	GATC	3 cut(s)	199, 499, 1082
Eam1104I	CTCTTC	2 cut(s)	321, 1377
EarI	CTCTTC	2 cut(s)	321, 1377
Eco130I	CCWWGG	1 cut(s)	932
Eco32I	GATATC	1 cut(s)	1095
Eco47I	GGWCC	2 cut(s)	464, 586
Eco57I	CTGAAG	1 cut(s)	810
EcoO109I	RGGNCCY	1 cut(s)	586
EcoRII	CCWGG	4 cut(s)	60, 247, 454, 677
EcoRV	GATATC	1 cut(s)	1095
EcoT14I	CCWWGG	1 cut(s)	932
EcoT22I	ATGCAT	2 cut(s)	954, 1297
ErhI	CCWWGG	1 cut(s)	932
FalI	AAGNNNNNCTT	2 cut(s)	300, 332
FaqI	GGGAC	2 cut(s)	100, 599
FauNDI	CATATG	1 cut(s)	862
FblI	GTMKAC	1 cut(s)	1044
Fnu4HI	GCNGC	7 cut(s)	431, 666, 905, 1132, 1223, 1388, 1398
Fsp4HI	GCNGC	7 cut(s)	431, 666, 905, 1132, 1223, 1388, 1398
FspBI	CTAG	3 cut(s)	1190, 1251, 1394
GluI	GCNGC	7 cut(s)	431, 666, 905, 1132, 1223, 1388, 1398
GsaI	CCCAGC	1 cut(s)	36
GsuI	CTGGAG	2 cut(s)	83, 222
HaeIII	GGCC	1 cut(s)	489
HapII	CCGG	3 cut(s)	159, 760, 1243
HindIII	AAGCTT	1 cut(s)	780
HinfI	GANTC	5 cut(s)	518, 998, 1148, 1315, 1343
HpaII	CCGG	3 cut(s)	159, 760, 1243
HphI	GGTGA	1 cut(s)	740
Hpy166II	GTNNAC	5 cut(s)	444, 651, 916, 1045, 1162
Hpy188I	TCNGA	2 cut(s)	1087, 1314
Hpy8I	GTNNAC	5 cut(s)	444, 651, 916, 1045, 1162
HpyAV	CCTTC	3 cut(s)	751, 986, 1187
HpyCH4III	ACNGT	5 cut(s)	29, 137, 262, 571, 1128
HpyCH4IV	ACGT	1 cut(s)	482
HpyCH4V	TGCA	8 cut(s)	366, 599, 692, 952, 977, 1131, 1295, 1331
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1337
HpyF3I	CTNAG	2 cut(s)	174, 1234
HpySE526I	ACGT	1 cut(s)	482
Kzo9I	GATC	3 cut(s)	199, 499, 1082
LguI	GCTCTTC	1 cut(s)	1377
LmnI	GCTCC	2 cut(s)	901, 1395
Lsp1109I	GCAGC	5 cut(s)	652, 891, 1143, 1234, 1399
LweI	GCATC	1 cut(s)	1318
MabI	ACCWGGT	1 cut(s)	247
MaeI	CTAG	3 cut(s)	1190, 1251, 1394
MaeII	ACGT	1 cut(s)	482
MaeIII	GTNAC	6 cut(s)	10, 48, 232, 350, 1142, 1201
MalI	GATC	3 cut(s)	201, 501, 1084
MbiI	CCGCTC	1 cut(s)	1090
MboI	GATC	3 cut(s)	199, 499, 1082
MboII	GAAGA	2 cut(s)	308, 1394
MflI	RGATCY	2 cut(s)	499, 1082
MluCI	AATT	3 cut(s)	337, 376, 545
Mph1103I	ATGCAT	2 cut(s)	954, 1297
MslI	CAYNNNNRTG	3 cut(s)	1007, 1068, 1074
MspI	CCGG	3 cut(s)	159, 760, 1243
MspR9I	CCNGG	6 cut(s)	62, 159, 249, 456, 679, 1244
Mva1269I	GAATGC	1 cut(s)	952
MvaI	CCWGG	4 cut(s)	62, 249, 456, 679
MvnI	CGCG	1 cut(s)	430
MwoI	GCNNNNNNNGC	1 cut(s)	1337
NciI	CCSGG	2 cut(s)	159, 1244
NcoI	CCATGG	1 cut(s)	932
NdeI	CATATG	1 cut(s)	862
NdeII	GATC	3 cut(s)	199, 499, 1082
NheI	GCTAGC	1 cut(s)	1250
NlaIV	GGNNCC	1 cut(s)	587
NmuCI	GTSAC	2 cut(s)	232, 1142
NsiI	ATGCAT	2 cut(s)	954, 1297
PagI	TCATGA	2 cut(s)	202, 616
PciSI	GCTCTTC	1 cut(s)	1377
PctI	GAATGC	1 cut(s)	952
PfeI	GAWTC	5 cut(s)	518, 998, 1148, 1315, 1343
PfoI	TCCNGGA	3 cut(s)	60, 157, 1242
PinAI	ACCGGT	1 cut(s)	759
PkrI	GCNGC	7 cut(s)	432, 667, 906, 1133, 1224, 1389, 1399
PpuMI	RGGWCCY	1 cut(s)	586
Psp5II	RGGWCCY	1 cut(s)	586
Psp6I	CCWGG	4 cut(s)	60, 247, 454, 677
PspFI	CCCAGC	1 cut(s)	32
PspGI	CCWGG	4 cut(s)	60, 247, 454, 677
PspN4I	GGNNCC	1 cut(s)	587
PspPI	GGNCC	2 cut(s)	464, 586
PspPPI	RGGWCCY	1 cut(s)	586
PstI	CTGCAG	1 cut(s)	694
PstNI	CAGNNNCTG	1 cut(s)	1368
PsuI	RGATCY	2 cut(s)	499, 1082
RsaI	GTAC	6 cut(s)	259, 793, 809, 1016, 1037, 1109
RsaNI	GTAC	6 cut(s)	258, 792, 808, 1015, 1036, 1108
RseI	CAYNNNNRTG	3 cut(s)	1007, 1068, 1074
SapI	GCTCTTC	1 cut(s)	1377
SatI	GCNGC	7 cut(s)	431, 666, 905, 1132, 1223, 1388, 1398
Sau3AI	GATC	3 cut(s)	199, 499, 1082
Sau96I	GGNCC	2 cut(s)	464, 586
ScrFI	CCNGG	6 cut(s)	62, 159, 249, 456, 679, 1244
SexAI	ACCWGGT	1 cut(s)	247
SfaNI	GCATC	1 cut(s)	1318
SfcI	CTRYAG	1 cut(s)	690
SinI	GGWCC	2 cut(s)	464, 586
SmiMI	CAYNNNNRTG	3 cut(s)	1007, 1068, 1074
SmlI	CTYRAG	1 cut(s)	306
SmoI	CTYRAG	1 cut(s)	306
Sse9I	AATT	3 cut(s)	337, 376, 545
SsiI	CCGC	6 cut(s)	430, 433, 858, 1090, 1220, 1398
SspI	AATATT	1 cut(s)	1102
SspMI	CTAG	3 cut(s)	1190, 1251, 1394
StyD4I	CCNGG	6 cut(s)	60, 157, 247, 454, 677, 1242
StyI	CCWWGG	1 cut(s)	932
TaaI	ACNGT	5 cut(s)	29, 137, 262, 571, 1128
TaiI	ACGT	1 cut(s)	485
TaqI	TCGA	3 cut(s)	526, 708, 1272
TasI	AATT	3 cut(s)	337, 376, 545
TatI	WGTACW	3 cut(s)	257, 791, 1035
TauI	GCSGC	2 cut(s)	433, 1400
TfiI	GAWTC	5 cut(s)	518, 998, 1148, 1315, 1343
TscAI	CASTG	4 cut(s)	34, 142, 267, 368
TseFI	GTSAC	2 cut(s)	232, 1142
TseI	GCWGC	5 cut(s)	665, 904, 1131, 1222, 1387
Tsp45I	GTSAC	2 cut(s)	232, 1142
TspDTI	ATGAA	8 cut(s)	173, 258, 347, 420, 558, 605, 1058, 1092
TspGWI	ACGGA	1 cut(s)	600
TspRI	CASTG	4 cut(s)	34, 142, 267, 368
VpaK11BI	GGWCC	2 cut(s)	464, 586
XbaI	TCTAGA	1 cut(s)	1189
XcmI	CCANNNNNNNNNTGG	1 cut(s)	376
XmiI	GTMKAC	1 cut(s)	1044
XspI	CTAG	3 cut(s)	1190, 1251, 1394
Zsp2I	ATGCAT	2 cut(s)	954, 1297

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.