Prupe.1G382800_v2.0.a1

Methyladenine glycosylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012176
Physical Location & Seq
Forward (+)
34408561 .. 34411054
2494 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G382800.1

Sequence Viewer

Length: 990 bp
ATGTCTGTGGCTACAAAGCTTCAATCTTCGATTTGTGAGCCCCGAGCTGTACTCGGTCCCGGCGGGAACAGAGTTAGGGTTTCAGAGGCCCCGAAACGCAAGAACGAGGGCTTGAAGAAGCCACCGCAGAGGCCGAGAAAACCTGTATCGGAAATTCCAGAAGCGGTTGTACGGAACAACGTTTCGGTGGACAGCACCTGCTCTTCTGATACCTCGTCGAGCTGTTCATCTGCTAAAACGGTGAGTCCTAGAAGGACTGTGAGGCACAAGAGCTTGAGGCCTGCGAAGCTTGTTTCGGACGATATGGAGGTCGTCAAGCCCGCGGGTCCACCTAAACGGTGTGAATGGATTACACCAAACTCTGACCCAGTTTATACTTGTTTCCACGATGAAGAATGGGGGGTTCCAGTTTATGATGATAAGAAGCTGTTTGAGTTGCTCGTCCTTTCACAAGCTCTAGCCGAACTCAGTTGGCCAGAAATTCTACACAAGAGAGACATGTTCCGGAAACTTTTTGACGACTTTGATCCGTCATCCATAGCAAAGTTCGAAGAGAAGAAGCTACTGTCTCTCAAAATAAATGGCATTCCATTGCTATCTGAACAAAAGCTTCGTGCAGTTGTGGAGAATGCTATGCAAATGCTCAAGGTTCAGCAGGAGTTTGGTTCCTTCAGTAACTACTGCTGGAGCTTTGTGAACCACAAGCCAATAAGAAACAGATTTCGTTATGGACGCCAAGTACCGGTGAAGTCGCCAAAAGCTGAAGTCATAAGCAAAGATTTGATGAAGAGAGGCTTCCGTTGTGTTGGTCCTACTGTGATTTACTCGTTTATGCAAGTGGCAGGGATTGTGAACGATCATCTCATAACATGCTTCAGATACAAGGAGTGCGATGCAAATGACAACAAATTAGACCTGAAACTTAAGACGGAAGAGAAGACGGAGGTGCTAAAACTAAGTGAAGCTATGGAGATTGGAGAGCACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03410 map03410
Pfam Domains
Protein Families
Adenine_glyco

Protein Analysis

330

Amino Acids

37.37

Weight (kDa)

9.27

Isoelectric Point (pI)

45.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012176)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15970 AT1G15970 AT1G75090 AT1G80850
fragaria_vesca FvH4_2g40160
malus_domestica MD08G1035300.v1.1
prunus_persica Prupe.1G382800_v2.0.a1
pyrus_communis pycom08g02790
rosa_chinensis RchiOBHm_Chr6g0300571
rosa_laevigata RLG00000011323
rosa_multiflora Rmu_sc0021182.1_g000001 Rmu_sc0026329.1_g000001
rosa_roxburghii Rroxscaffold_7G00167660
rosa_rugosa Rorug06G0297300
rosa_samantha Rh6AG409800 Rh6BG416900 Rh6CG424800 Rh6DG410300
rosa_wichuraiana Rw6G035860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 206
Acc36I ACCTGC 1 cut(s) 206
AccII CGCG 1 cut(s) 323
AccIII TCCGGA 1 cut(s) 504
AciI CCGC 5 cut(s) 63, 125, 164, 321, 323
AclI AACGTT 1 cut(s) 180
AclWI GGATC 1 cut(s) 521
AcoI YGGCCR 1 cut(s) 473
AcsI RAATTY 2 cut(s) 153, 480
AcuI CTGAAG 3 cut(s) 655, 783, 859
AcyI GRCGYC 1 cut(s) 733
AfaI GTAC 3 cut(s) 51, 171, 741
AfiI CCNNNNNNNGG 1 cut(s) 742
AflII CTTAAG 1 cut(s) 923
AflIII ACRYGT 1 cut(s) 498
AgeI ACCGGT 1 cut(s) 742
AgsI TTSAA 2 cut(s) 23, 115
Alw21I GWGCWC 1 cut(s) 984
Alw26I GTCTC 2 cut(s) 489, 573
AlwI GGATC 1 cut(s) 521
AlwNI CAGNNNCTG 1 cut(s) 198
Ama87I CYCGRG 1 cut(s) 42
Aor13HI TCCGGA 1 cut(s) 504
AoxI GGCC 4 cut(s) 87, 131, 278, 473
ApoI RAATTY 2 cut(s) 153, 480
AsiGI ACCGGT 1 cut(s) 742
AspS9I GGNCC 4 cut(s) 56, 88, 326, 809
AsuC2I CCSGG 1 cut(s) 60
AsuHPI GGTGA 2 cut(s) 253, 757
AsuII TTCGAA 1 cut(s) 549
AvaI CYCGRG 1 cut(s) 42
AvaII GGWCC 3 cut(s) 56, 326, 809
BalI TGGCCA 1 cut(s) 475
BanII GRGCYC 1 cut(s) 42
BarI GAAGNNNNNNTAC 2 cut(s) 153, 185
BbsI GAAGAC 1 cut(s) 944
Bbv12I GWGCWC 1 cut(s) 984
BcnI CCSGG 1 cut(s) 60
BcoDI GTCTC 2 cut(s) 489, 573
BfaI CTAG 2 cut(s) 249, 458
BfrI CTTAAG 1 cut(s) 923
BfuAI ACCTGC 1 cut(s) 206
Bme1390I CCNGG 1 cut(s) 60
Bme18I GGWCC 3 cut(s) 56, 326, 809
BmeT110I CYCGRG 1 cut(s) 42
BmgT120I GGNCC 4 cut(s) 56, 88, 326, 809
BmiI GGNNCC 5 cut(s) 58, 90, 327, 405, 667
BmrFI CCNGG 1 cut(s) 60
BmrI ACTGGG 1 cut(s) 362
BmsI GCATC 1 cut(s) 883
BmuI ACTGGG 1 cut(s) 362
BpiI GAAGAC 1 cut(s) 944
BplI GAGNNNNNCTC 2 cut(s) 36, 68
BpmI CTGGAG 1 cut(s) 706
Bpu14I TTCGAA 1 cut(s) 549
BpuEI CTTGAG 2 cut(s) 295, 629
BpuMI CCSGG 1 cut(s) 60
BsaHI GRCGYC 1 cut(s) 733
BsaJI CCNNGG 1 cut(s) 321
BsaWI WCCGGW 2 cut(s) 504, 742
Bsc4I CCNNNNNNNGG 1 cut(s) 742
Bse118I RCCGGY 1 cut(s) 742
Bse1I ACTGG 2 cut(s) 368, 407
Bse3DI GCAATG 1 cut(s) 590
BseAI TCCGGA 1 cut(s) 504
BseDI CCNNGG 1 cut(s) 321
BseGI GGATG 1 cut(s) 533
BseLI CCNNNNNNNGG 1 cut(s) 742
BseMI GCAATG 1 cut(s) 590
BseMII CTCAG 1 cut(s) 481
BseNI ACTGG 2 cut(s) 368, 407
BsgI GTGCAG 1 cut(s) 636
Bsh1236I CGCG 1 cut(s) 323
BshFI GGCC 4 cut(s) 89, 133, 280, 475
BshTI ACCGGT 1 cut(s) 742
BsiHKAI GWGCWC 1 cut(s) 984
BsiHKCI CYCGRG 1 cut(s) 42
BsiSI CCGG 3 cut(s) 60, 505, 743
BslFI GGGAC 1 cut(s) 42
BslI CCNNNNNNNGG 1 cut(s) 742
BsmAI GTCTC 2 cut(s) 489, 573
BsmFI GGGAC 1 cut(s) 42
BsmI GAATGC 2 cut(s) 585, 634
BsnI GGCC 4 cut(s) 89, 133, 280, 475
BsoBI CYCGRG 1 cut(s) 42
Bsp119I TTCGAA 1 cut(s) 549
Bsp1286I GDGCHC 2 cut(s) 42, 984
Bsp13I TCCGGA 1 cut(s) 504
Bsp143I GATC 2 cut(s) 526, 856
BspACI CCGC 5 cut(s) 63, 125, 164, 321, 323
BspANI GGCC 4 cut(s) 89, 133, 280, 475
BspCNI CTCAG 1 cut(s) 480
BspEI TCCGGA 1 cut(s) 504
BspFNI CGCG 1 cut(s) 323
BspLI GGNNCC 5 cut(s) 58, 90, 327, 405, 667
BspMI ACCTGC 1 cut(s) 206
BspPI GGATC 1 cut(s) 521
BspQI GCTCTTC 1 cut(s) 208
BspT104I TTCGAA 1 cut(s) 549
BspTI CTTAAG 1 cut(s) 923
BsrDI GCAATG 1 cut(s) 590
BsrFI RCCGGY 1 cut(s) 742
BsrI ACTGG 2 cut(s) 368, 407
BssAI RCCGGY 1 cut(s) 742
BssECI CCNNGG 1 cut(s) 321
BssMI GATC 2 cut(s) 526, 856
BssNI GRCGYC 1 cut(s) 733
Bst4CI ACNGT 5 cut(s) 241, 259, 339, 567, 817
Bst6I CTCTTC 4 cut(s) 208, 546, 782, 927
BstACI GRCGYC 1 cut(s) 733
BstAFI CTTAAG 1 cut(s) 923
BstBI TTCGAA 1 cut(s) 549
BstC8I GCNNGC 2 cut(s) 282, 321
BstDEI CTNAG 2 cut(s) 467, 956
BstDSI CCRYGG 1 cut(s) 321
BstF5I GGATG 1 cut(s) 533
BstFNI CGCG 1 cut(s) 323
BstKTI GATC 2 cut(s) 529, 859
BstMAI GTCTC 2 cut(s) 489, 573
BstMBI GATC 2 cut(s) 526, 856
BstMWI GCNNNNNNNGC 1 cut(s) 286
BstNSI RCATGY 2 cut(s) 502, 873
BstSCI CCNGG 1 cut(s) 58
BstUI CGCG 1 cut(s) 323
BstV2I GAAGAC 1 cut(s) 944
BsuRI GGCC 4 cut(s) 89, 133, 280, 475
BtgI CCRYGG 1 cut(s) 321
BtgZI GCGATG 1 cut(s) 906
BtsCI GGATG 1 cut(s) 533
BveI ACCTGC 1 cut(s) 206
Cac8I GCNNGC 2 cut(s) 282, 321
CaiI CAGNNNCTG 1 cut(s) 198
Cfr10I RCCGGY 1 cut(s) 742
Cfr13I GGNCC 4 cut(s) 56, 88, 326, 809
Cfr42I CCGCGG 1 cut(s) 324
CseI GACGC 1 cut(s) 741
Csp6I GTAC 3 cut(s) 50, 170, 740
CspAI ACCGGT 1 cut(s) 742
CviAII CATG 2 cut(s) 499, 870
CviQI GTAC 3 cut(s) 50, 170, 740
DdeI CTNAG 2 cut(s) 467, 956
DpnI GATC 2 cut(s) 528, 858
DpnII GATC 2 cut(s) 526, 856
EaeI YGGCCR 1 cut(s) 473
Eam1104I CTCTTC 4 cut(s) 208, 546, 782, 927
EarI CTCTTC 4 cut(s) 208, 546, 782, 927
Eco147I AGGCCT 1 cut(s) 280
Eco24I GRGCYC 1 cut(s) 42
Eco47I GGWCC 3 cut(s) 56, 326, 809
Eco57I CTGAAG 3 cut(s) 655, 783, 859
Eco88I CYCGRG 1 cut(s) 42
EcoO109I RGGNCCY 1 cut(s) 88
EcoT38I GRGCYC 1 cut(s) 42
FaeI CATG 2 cut(s) 502, 873
FalI AAGNNNNNCTT 2 cut(s) 779, 811
FaqI GGGAC 1 cut(s) 42
FatI CATG 2 cut(s) 498, 869
FauI CCCGC 3 cut(s) 56, 316, 328
FokI GGATG 1 cut(s) 520
FriOI GRGCYC 1 cut(s) 42
FspBI CTAG 2 cut(s) 249, 458
GsuI CTGGAG 1 cut(s) 706
HaeIII GGCC 4 cut(s) 89, 133, 280, 475
HapII CCGG 3 cut(s) 60, 505, 743
HgaI GACGC 1 cut(s) 741
Hin1I GRCGYC 1 cut(s) 733
Hin1II CATG 2 cut(s) 502, 873
HindIII AAGCTT 3 cut(s) 17, 287, 608
HinfI GANTC 1 cut(s) 244
HpaII CCGG 3 cut(s) 60, 505, 743
HphI GGTGA 2 cut(s) 253, 757
Hpy166II GTNNAC 4 cut(s) 190, 329, 697, 853
Hpy188I TCNGA 7 cut(s) 85, 151, 208, 298, 364, 601, 878
Hpy188III TCNNGA 2 cut(s) 158, 505
Hpy8I GTNNAC 4 cut(s) 190, 329, 697, 853
Hpy99I CGWCG 1 cut(s) 220
HpyAV CCTTC 2 cut(s) 246, 679
HpyCH4III ACNGT 5 cut(s) 241, 259, 339, 567, 817
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 4 cut(s) 617, 637, 835, 896
HpyF10VI GCNNNNNNNGC 1 cut(s) 286
HpyF3I CTNAG 2 cut(s) 467, 956
HpySE526I ACGT 1 cut(s) 180
Hsp92I GRCGYC 1 cut(s) 733
Hsp92II CATG 2 cut(s) 502, 873
Kpn2I TCCGGA 1 cut(s) 504
KspI CCGCGG 1 cut(s) 324
Kzo9I GATC 2 cut(s) 526, 856
LguI GCTCTTC 1 cut(s) 208
LmnI GCTCC 1 cut(s) 687
LweI GCATC 1 cut(s) 883
MaeI CTAG 2 cut(s) 249, 458
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 1 cut(s) 674
MalI GATC 2 cut(s) 528, 858
MboI GATC 2 cut(s) 526, 856
MboII GAAGA 9 cut(s) 18, 127, 195, 404, 563, 568, 799, 944, 949
MhlI GDGCHC 2 cut(s) 42, 984
MlsI TGGCCA 1 cut(s) 475
MluCI AATT 3 cut(s) 153, 480, 908
MluNI TGGCCA 1 cut(s) 475
MlyI GAGTC 1 cut(s) 253
MnlI CCTC 9 cut(s) 79, 100, 123, 223, 255, 270, 301, 785, 937
Mox20I TGGCCA 1 cut(s) 475
MroI TCCGGA 1 cut(s) 504
MscI TGGCCA 1 cut(s) 475
MseI TTAA 1 cut(s) 924
Msp20I TGGCCA 1 cut(s) 475
MspA1I CMGCKG 1 cut(s) 323
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 3 cut(s) 60, 505, 743
MspR9I CCNGG 1 cut(s) 60
Mva1269I GAATGC 2 cut(s) 585, 634
MvnI CGCG 1 cut(s) 323
MwoI GCNNNNNNNGC 1 cut(s) 286
NciI CCSGG 1 cut(s) 60
NdeII GATC 2 cut(s) 526, 856
NlaIII CATG 2 cut(s) 502, 873
NlaIV GGNNCC 5 cut(s) 58, 90, 327, 405, 667
NmeAIII GCCGAG 1 cut(s) 159
NspI RCATGY 2 cut(s) 502, 873
NspV TTCGAA 1 cut(s) 549
PaqCI CACCTGC 1 cut(s) 206
PceI AGGCCT 1 cut(s) 280
PciI ACATGT 1 cut(s) 498
PciSI GCTCTTC 1 cut(s) 208
PctI GAATGC 2 cut(s) 585, 634
PinAI ACCGGT 1 cut(s) 742
PleI GAGTC 1 cut(s) 252
PpsI GAGTC 1 cut(s) 252
PscI ACATGT 1 cut(s) 498
Psp1406I AACGTT 1 cut(s) 180
PspN4I GGNNCC 5 cut(s) 58, 90, 327, 405, 667
PspPI GGNCC 4 cut(s) 56, 88, 326, 809
PstNI CAGNNNCTG 1 cut(s) 198
RsaI GTAC 3 cut(s) 51, 171, 741
RsaNI GTAC 3 cut(s) 50, 170, 740
SacII CCGCGG 1 cut(s) 324
SapI GCTCTTC 1 cut(s) 208
SaqAI TTAA 1 cut(s) 924
Sau3AI GATC 2 cut(s) 526, 856
Sau96I GGNCC 4 cut(s) 56, 88, 326, 809
SchI GAGTC 1 cut(s) 253
ScrFI CCNGG 1 cut(s) 60
SduI GDGCHC 2 cut(s) 42, 984
SfaNI GCATC 1 cut(s) 883
Sfr303I CCGCGG 1 cut(s) 324
SfuI TTCGAA 1 cut(s) 549
SgrBI CCGCGG 1 cut(s) 324
SinI GGWCC 3 cut(s) 56, 326, 809
SmlI CTYRAG 3 cut(s) 274, 644, 923
SmoI CTYRAG 3 cut(s) 274, 644, 923
Sse9I AATT 3 cut(s) 153, 480, 908
SseBI AGGCCT 1 cut(s) 280
SsiI CCGC 5 cut(s) 63, 125, 164, 321, 323
SspMI CTAG 2 cut(s) 249, 458
StuI AGGCCT 1 cut(s) 280
StyD4I CCNGG 1 cut(s) 58
TaaI ACNGT 5 cut(s) 241, 259, 339, 567, 817
TaiI ACGT 1 cut(s) 183
TaqI TCGA 3 cut(s) 29, 218, 549
TaqII GACCGA 1 cut(s) 44
TasI AATT 3 cut(s) 153, 480, 908
TatI WGTACW 1 cut(s) 49
Tru1I TTAA 1 cut(s) 924
Tru9I TTAA 1 cut(s) 924
TspDTI ATGAA 3 cut(s) 216, 405, 800
TspGWI ACGGA 5 cut(s) 187, 519, 788, 944, 956
Vha464I CTTAAG 1 cut(s) 923
VpaK11BI GGWCC 3 cut(s) 56, 326, 809
XapI RAATTY 2 cut(s) 153, 480
XceI RCATGY 2 cut(s) 502, 873
XspI CTAG 2 cut(s) 249, 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.