Rmu_sc0021182.1_g000001

Methyladenine glycosylase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021182.1
Physical Location & Seq
Forward (+)
1 .. 1332
1332 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021182.1_g000001.1.cds

Sequence Viewer

Length: 560 bp
aatggggagttccagtatatgatgataagaagctgtttgaactactcgtcctttcgcaatctctagcagaactcagttggcctgaaattcttaccaagagggacatattcaggaatctttttgacaactttgatccttcgtccattgcaaagtttgatgagaagaagttactgtcactcaaagtaaatggcatcccaattctatcccaacaaaagcttcgtgcaatcgttgacaatgctatacaagtggtcaagattcagcaagaggttggttccttcagtaaatattgctggagctttgtgaaccagaaggcgatcaacaatggagttcgttatggccgtcaagtaccagtaaagtcaccaaaagctgaagttataagcaaggatttgatgaagagaggcttccgttgtgttggtcctactgttgtctattcattcatgcaagtagctgggattgtgaatgatcatcttgtaacatgcttcaggcacaaagtgtgcgatgtcaacgccaagttcgatccgaaacttgatatcgagaagtccaaggatctaccaaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

185

Amino Acids

21.1

Weight (kDa)

9.41

Isoelectric Point (pI)

32.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012176)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 376
AclWI GGATC 3 cut(s) 127, 511, 554
AcoI YGGCCR 1 cut(s) 336
AcsI RAATTY 1 cut(s) 86
AcuI CTGAAG 3 cut(s) 261, 389, 465
AdeI CACNNNGTG 1 cut(s) 492
AfaI GTAC 1 cut(s) 347
AgsI TTSAA 1 cut(s) 40
AjuI GAANNNNNNNTTGG 2 cut(s) 200, 232
AloI GAACNNNNNNTCC 2 cut(s) 32, 64
AluBI AGCT 5 cut(s) 33, 216, 296, 367, 448
AluI AGCT 5 cut(s) 33, 216, 296, 367, 448
AlwI GGATC 3 cut(s) 127, 511, 554
AoxI GGCC 2 cut(s) 79, 336
ApoI RAATTY 1 cut(s) 86
AspS9I GGNCC 1 cut(s) 415
AsuHPI GGTGA 1 cut(s) 350
AvaII GGWCC 1 cut(s) 415
BceAI ACGGC 1 cut(s) 323
BclI TGATCA 1 cut(s) 462
BfaI CTAG 1 cut(s) 64
Bme18I GGWCC 1 cut(s) 415
BmgT120I GGNCC 1 cut(s) 415
BmiI GGNNCC 1 cut(s) 273
BmsI GCATC 1 cut(s) 200
BpmI CTGGAG 1 cut(s) 312
BsaJI CCNNGG 1 cut(s) 542
BsaXI ACNNNNNCTCC 1 cut(s) 29
Bse1I ACTGG 2 cut(s) 13, 349
Bse3DI GCAATG 1 cut(s) 143
BseDI CCNNGG 1 cut(s) 542
BseGI GGATG 1 cut(s) 191
BseMI GCAATG 1 cut(s) 143
BseMII CTCAG 1 cut(s) 87
BseNI ACTGG 2 cut(s) 13, 349
BseYI CCCAGC 1 cut(s) 448
BshFI GGCC 2 cut(s) 81, 338
BslFI GGGAC 1 cut(s) 115
BsmFI GGGAC 1 cut(s) 115
BsnI GGCC 2 cut(s) 81, 338
Bsp143I GATC 5 cut(s) 132, 314, 462, 516, 546
BspANI GGCC 2 cut(s) 81, 338
BspCNI CTCAG 1 cut(s) 86
BspLI GGNNCC 1 cut(s) 273
BspPI GGATC 3 cut(s) 127, 511, 554
BsrDI GCAATG 1 cut(s) 143
BsrI ACTGG 2 cut(s) 13, 349
BssECI CCNNGG 1 cut(s) 542
BssMI GATC 5 cut(s) 132, 314, 462, 516, 546
BssT1I CCWWGG 1 cut(s) 542
Bst4CI ACNGT 2 cut(s) 173, 423
Bst6I CTCTTC 1 cut(s) 388
BstDEI CTNAG 1 cut(s) 73
BstF5I GGATG 1 cut(s) 191
BstKTI GATC 5 cut(s) 135, 317, 465, 519, 549
BstMBI GATC 5 cut(s) 132, 314, 462, 516, 546
BstNSI RCATGY 1 cut(s) 479
BstX2I RGATCY 1 cut(s) 546
BstYI RGATCY 1 cut(s) 546
BsuRI GGCC 2 cut(s) 81, 338
BtgZI GCGATG 1 cut(s) 512
BtsCI GGATG 1 cut(s) 191
Cfr13I GGNCC 1 cut(s) 415
Csp6I GTAC 1 cut(s) 346
CviAII CATG 2 cut(s) 438, 476
CviJI RGCY 8 cut(s) 33, 81, 216, 296, 338, 367, 401, 448
CviKI_1 RGCY 8 cut(s) 33, 81, 216, 296, 338, 367, 401, 448
CviQI GTAC 1 cut(s) 346
DdeI CTNAG 1 cut(s) 73
DpnI GATC 5 cut(s) 134, 316, 464, 518, 548
DpnII GATC 5 cut(s) 132, 314, 462, 516, 546
DraIII CACNNNGTG 1 cut(s) 492
EaeI YGGCCR 1 cut(s) 336
Eam1104I CTCTTC 1 cut(s) 388
EarI CTCTTC 1 cut(s) 388
Eco130I CCWWGG 1 cut(s) 542
Eco32I GATATC 1 cut(s) 531
Eco47I GGWCC 1 cut(s) 415
Eco57I CTGAAG 3 cut(s) 261, 389, 465
EcoRV GATATC 1 cut(s) 531
EcoT14I CCWWGG 1 cut(s) 542
ErhI CCWWGG 1 cut(s) 542
FaeI CATG 2 cut(s) 441, 479
FaiI YATR 8 cut(s) 18, 20, 106, 241, 335, 376, 439, 477
FalI AAGNNNNNCTT 2 cut(s) 385, 417
FaqI GGGAC 1 cut(s) 115
FatI CATG 2 cut(s) 437, 475
FbaI TGATCA 1 cut(s) 462
FokI GGATG 1 cut(s) 178
FspBI CTAG 1 cut(s) 64
GsaI CCCAGC 1 cut(s) 452
GsuI CTGGAG 1 cut(s) 312
HaeIII GGCC 2 cut(s) 81, 338
Hin1II CATG 2 cut(s) 441, 479
HincII GTYRAC 2 cut(s) 231, 504
HindII GTYRAC 2 cut(s) 231, 504
HindIII AAGCTT 1 cut(s) 214
HinfI GANTC 2 cut(s) 114, 255
HphI GGTGA 1 cut(s) 350
Hpy166II GTNNAC 3 cut(s) 231, 303, 504
Hpy188I TCNGA 1 cut(s) 521
Hpy188III TCNNGA 3 cut(s) 111, 252, 534
Hpy8I GTNNAC 3 cut(s) 231, 303, 504
HpyAV CCTTC 3 cut(s) 146, 285, 303
HpyCH4III ACNGT 2 cut(s) 173, 423
HpyCH4V TGCA 3 cut(s) 148, 223, 441
HpyF3I CTNAG 1 cut(s) 73
Hsp92II CATG 2 cut(s) 441, 479
Ksp22I TGATCA 1 cut(s) 462
Kzo9I GATC 5 cut(s) 132, 314, 462, 516, 546
LmnI GCTCC 1 cut(s) 293
LpnPI CCDG 8 cut(s) 26, 95, 96, 276, 319, 362, 434, 468
LweI GCATC 1 cut(s) 200
MaeI CTAG 1 cut(s) 64
MaeIII GTNAC 4 cut(s) 167, 173, 356, 471
MalI GATC 5 cut(s) 134, 316, 464, 518, 548
MboI GATC 5 cut(s) 132, 314, 462, 516, 546
MboII GAAGA 2 cut(s) 174, 405
MflI RGATCY 1 cut(s) 546
MluCI AATT 2 cut(s) 86, 197
MnlI CCTC 3 cut(s) 92, 258, 391
NdeII GATC 5 cut(s) 132, 314, 462, 516, 546
NlaIII CATG 2 cut(s) 441, 479
NlaIV GGNNCC 1 cut(s) 273
NmuCI GTSAC 2 cut(s) 173, 356
NspI RCATGY 1 cut(s) 479
PcsI WCGNNNNNNNCGW 2 cut(s) 336, 512
PfeI GAWTC 2 cut(s) 114, 255
PsiI TTATAA 1 cut(s) 376
PspFI CCCAGC 1 cut(s) 448
PspN4I GGNNCC 1 cut(s) 273
PspPI GGNCC 1 cut(s) 415
PsuI RGATCY 1 cut(s) 546
RsaI GTAC 1 cut(s) 347
RsaNI GTAC 1 cut(s) 346
Sau3AI GATC 5 cut(s) 132, 314, 462, 516, 546
Sau96I GGNCC 1 cut(s) 415
SetI ASST 6 cut(s) 35, 218, 269, 298, 369, 450
SfaNI GCATC 1 cut(s) 200
SinI GGWCC 1 cut(s) 415
Sse9I AATT 2 cut(s) 86, 197
SspI AATATT 1 cut(s) 286
SspMI CTAG 1 cut(s) 64
StyI CCWWGG 1 cut(s) 542
TaaI ACNGT 2 cut(s) 173, 423
TaqI TCGA 2 cut(s) 515, 533
TasI AATT 2 cut(s) 86, 197
TfiI GAWTC 2 cut(s) 114, 255
TseFI GTSAC 2 cut(s) 173, 356
Tsp45I GTSAC 2 cut(s) 173, 356
TspDTI ATGAA 3 cut(s) 406, 422, 426
TspGWI ACGGA 1 cut(s) 394
VpaK11BI GGWCC 1 cut(s) 415
XapI RAATTY 1 cut(s) 86
XceI RCATGY 1 cut(s) 479
XspI CTAG 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.