Rmu_sc0026329.1_g000001

Methyladenine glycosylase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0026329.1
Physical Location & Seq
Reverse (-)
2 .. 645
644 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0026329.1_g000001.1.cds

Sequence Viewer

Length: 400 bp
ctgtttgaactactcgtcctttcgcaatctctagcagaactcagttggcctgaaattcttaccaagagggacatattcaggaatctttttgacaactttgatccttcatccattgcaaagtttgatgagaagaagttactgtcactcaaagtaaatggcatcccaattctatcccaacaaaagcttcgtgcaatcgttgacaatgctatacaagtggtcaagattcagcaagaggttggttccttcagtaaatattgctggagctttgtgaaccagaaggcgatcaacaatggagttcgttatggccgtcaagtaccagtaaagtcaccaaaagctgaagttataagcaaggatttgatgaagagaggcttccgttgtgttggtcctactgttgtctatt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

15.15

Weight (kDa)

9.7

Isoelectric Point (pI)

32.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012176)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 344
AclWI GGATC 1 cut(s) 95
AcoI YGGCCR 1 cut(s) 304
AcsI RAATTY 1 cut(s) 54
AcuI CTGAAG 2 cut(s) 229, 357
AfaI GTAC 1 cut(s) 315
AgsI TTSAA 1 cut(s) 8
AjuI GAANNNNNNNTTGG 2 cut(s) 168, 200
AloI GAACNNNNNNTCC 1 cut(s) 32
AluBI AGCT 3 cut(s) 184, 264, 335
AluI AGCT 3 cut(s) 184, 264, 335
AlwI GGATC 1 cut(s) 95
AoxI GGCC 2 cut(s) 47, 304
ApoI RAATTY 1 cut(s) 54
AspS9I GGNCC 1 cut(s) 383
AsuHPI GGTGA 1 cut(s) 318
AvaII GGWCC 1 cut(s) 383
BceAI ACGGC 1 cut(s) 291
BfaI CTAG 1 cut(s) 32
Bme18I GGWCC 1 cut(s) 383
BmgT120I GGNCC 1 cut(s) 383
BmiI GGNNCC 1 cut(s) 241
BmsI GCATC 1 cut(s) 168
BpmI CTGGAG 1 cut(s) 280
Bse1I ACTGG 1 cut(s) 317
Bse3DI GCAATG 1 cut(s) 111
BseGI GGATG 2 cut(s) 107, 159
BseMI GCAATG 1 cut(s) 111
BseMII CTCAG 1 cut(s) 55
BseNI ACTGG 1 cut(s) 317
BshFI GGCC 2 cut(s) 49, 306
BslFI GGGAC 1 cut(s) 83
BsmFI GGGAC 1 cut(s) 83
BsnI GGCC 2 cut(s) 49, 306
Bsp143I GATC 2 cut(s) 100, 282
BspANI GGCC 2 cut(s) 49, 306
BspCNI CTCAG 1 cut(s) 54
BspLI GGNNCC 1 cut(s) 241
BspPI GGATC 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 111
BsrI ACTGG 1 cut(s) 317
BssMI GATC 2 cut(s) 100, 282
Bst4CI ACNGT 2 cut(s) 141, 391
Bst6I CTCTTC 1 cut(s) 356
BstDEI CTNAG 1 cut(s) 41
BstF5I GGATG 2 cut(s) 107, 159
BstKTI GATC 2 cut(s) 103, 285
BstMBI GATC 2 cut(s) 100, 282
BsuRI GGCC 2 cut(s) 49, 306
BtsCI GGATG 2 cut(s) 107, 159
Cfr13I GGNCC 1 cut(s) 383
Csp6I GTAC 1 cut(s) 314
CviJI RGCY 6 cut(s) 49, 184, 264, 306, 335, 369
CviKI_1 RGCY 6 cut(s) 49, 184, 264, 306, 335, 369
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 1 cut(s) 41
DpnI GATC 2 cut(s) 102, 284
DpnII GATC 2 cut(s) 100, 282
EaeI YGGCCR 1 cut(s) 304
Eam1104I CTCTTC 1 cut(s) 356
EarI CTCTTC 1 cut(s) 356
Eco47I GGWCC 1 cut(s) 383
Eco57I CTGAAG 2 cut(s) 229, 357
FaiI YATR 4 cut(s) 74, 209, 303, 344
FalI AAGNNNNNCTT 2 cut(s) 353, 385
FaqI GGGAC 1 cut(s) 83
FokI GGATG 2 cut(s) 94, 146
FspBI CTAG 1 cut(s) 32
GsuI CTGGAG 1 cut(s) 280
HaeIII GGCC 2 cut(s) 49, 306
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HindIII AAGCTT 1 cut(s) 182
HinfI GANTC 2 cut(s) 82, 223
HphI GGTGA 1 cut(s) 318
Hpy166II GTNNAC 2 cut(s) 199, 271
Hpy188III TCNNGA 2 cut(s) 79, 220
Hpy8I GTNNAC 2 cut(s) 199, 271
HpyAV CCTTC 3 cut(s) 114, 253, 271
HpyCH4III ACNGT 2 cut(s) 141, 391
HpyCH4V TGCA 2 cut(s) 116, 191
HpyF3I CTNAG 1 cut(s) 41
Kzo9I GATC 2 cut(s) 100, 282
LmnI GCTCC 1 cut(s) 261
LpnPI CCDG 5 cut(s) 63, 64, 244, 287, 330
LweI GCATC 1 cut(s) 168
MaeI CTAG 1 cut(s) 32
MaeIII GTNAC 3 cut(s) 135, 141, 324
MalI GATC 2 cut(s) 102, 284
MboI GATC 2 cut(s) 100, 282
MboII GAAGA 2 cut(s) 142, 373
MluCI AATT 2 cut(s) 54, 165
MnlI CCTC 3 cut(s) 60, 226, 359
NdeII GATC 2 cut(s) 100, 282
NlaIV GGNNCC 1 cut(s) 241
NmuCI GTSAC 2 cut(s) 141, 324
PcsI WCGNNNNNNNCGW 1 cut(s) 304
PfeI GAWTC 2 cut(s) 82, 223
PsiI TTATAA 1 cut(s) 344
PspN4I GGNNCC 1 cut(s) 241
PspPI GGNCC 1 cut(s) 383
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
Sau3AI GATC 2 cut(s) 100, 282
Sau96I GGNCC 1 cut(s) 383
SetI ASST 4 cut(s) 186, 237, 266, 337
SfaNI GCATC 1 cut(s) 168
SinI GGWCC 1 cut(s) 383
Sse9I AATT 2 cut(s) 54, 165
SspI AATATT 1 cut(s) 254
SspMI CTAG 1 cut(s) 32
TaaI ACNGT 2 cut(s) 141, 391
TasI AATT 2 cut(s) 54, 165
TfiI GAWTC 2 cut(s) 82, 223
TseFI GTSAC 2 cut(s) 141, 324
Tsp45I GTSAC 2 cut(s) 141, 324
TspDTI ATGAA 2 cut(s) 96, 374
TspGWI ACGGA 1 cut(s) 362
VpaK11BI GGWCC 1 cut(s) 383
XapI RAATTY 1 cut(s) 54
XspI CTAG 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.