Belongs to the NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31820 AT4G31820 |
| fragaria_vesca | FvH4_2g41130 FvH4_2g41130 FvH4_2g41130 FvH4_2g41130 |
| malus_domestica | MD08G1057100.v1.1 MD15G1040500.v1.1 MD15G1040600.v1.1 |
| prunus_persica | Prupe.1G393800_v2.0.a1 |
| pyrus_communis | pycom08g04650 pycom08g04660 pycom15g03780 |
| rosa_chinensis | RchiOBHm_Chr5g0077711 RchiOBHm_Chr6g0299411 |
| rosa_laevigata | RLG00000011434 |
| rosa_multiflora | Rmu_co8314217.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00168710 |
| rosa_rugosa | Rorug06G0288000 |
| rosa_samantha | Rh6AG399800 Rh6BG408200 Rh6CG413900 Rh6DG400900 |
| rosa_wichuraiana | Rw6G034990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 98 |
| Acc36I | ACCTGC | 1 cut(s) | 1441 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 627 |
| AccI | GTMKAC | 2 cut(s) | 519, 1162 |
| AclWI | GGATC | 4 cut(s) | 474, 956, 985, 1150 |
| AcsI | RAATTY | 5 cut(s) | 193, 246, 257, 1084, 1519 |
| AcuI | CTGAAG | 4 cut(s) | 219, 491, 1322, 1629 |
| AfaI | GTAC | 1 cut(s) | 1280 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 627 |
| AhlI | ACTAGT | 1 cut(s) | 169 |
| AjnI | CCWGG | 3 cut(s) | 223, 620, 1795 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1616, 1648 |
| Alw21I | GWGCWC | 2 cut(s) | 1311, 1754 |
| Alw26I | GTCTC | 2 cut(s) | 563, 1751 |
| AlwI | GGATC | 4 cut(s) | 474, 956, 985, 1150 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 572, 767, 1060 |
| AoxI | GGCC | 4 cut(s) | 180, 230, 729, 1259 |
| ApeKI | GCWGC | 7 cut(s) | 305, 317, 1394, 1408, 1463, 1478, 1732 |
| ApoI | RAATTY | 5 cut(s) | 193, 246, 257, 1084, 1519 |
| AseI | ATTAAT | 1 cut(s) | 1352 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 615, 1035 |
| AspLEI | GCGC | 1 cut(s) | 317 |
| AspS9I | GGNCC | 4 cut(s) | 21, 230, 540, 730 |
| AsuHPI | GGTGA | 2 cut(s) | 952, 1811 |
| AvaII | GGWCC | 2 cut(s) | 21, 540 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 379, 412 |
| BanII | GRGCYC | 1 cut(s) | 1754 |
| Bbv12I | GWGCWC | 2 cut(s) | 1311, 1754 |
| BbvCI | CCTCAGC | 1 cut(s) | 462 |
| BbvI | GCAGC | 7 cut(s) | 292, 304, 1381, 1395, 1465, 1475, 1744 |
| BccI | CCATC | 8 cut(s) | 41, 704, 747, 1166, 1265, 1381, 1497, 1537 |
| BceAI | ACGGC | 1 cut(s) | 1666 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 953, 987 |
| BciT130I | CCWGG | 3 cut(s) | 225, 622, 1797 |
| BcoDI | GTCTC | 2 cut(s) | 563, 1751 |
| BcuI | ACTAGT | 1 cut(s) | 169 |
| BfaI | CTAG | 6 cut(s) | 170, 362, 1218, 1314, 1686, 1849 |
| BfmI | CTRYAG | 2 cut(s) | 516, 1461 |
| BfuAI | ACCTGC | 1 cut(s) | 1441 |
| BglII | AGATCT | 1 cut(s) | 1457 |
| BisI | GCNGC | 7 cut(s) | 306, 318, 1395, 1409, 1464, 1479, 1733 |
| BlsI | GCNGC | 7 cut(s) | 307, 319, 1396, 1410, 1465, 1480, 1734 |
| Bme1390I | CCNGG | 3 cut(s) | 225, 622, 1797 |
| Bme18I | GGWCC | 2 cut(s) | 21, 540 |
| BmgT120I | GGNCC | 4 cut(s) | 21, 230, 540, 730 |
| BmiI | GGNNCC | 1 cut(s) | 22 |
| BmrFI | CCNGG | 3 cut(s) | 225, 622, 1797 |
| BmrI | ACTGGG | 1 cut(s) | 1488 |
| BmsI | GCATC | 6 cut(s) | 22, 476, 763, 1053, 1381, 1489 |
| BmuI | ACTGGG | 1 cut(s) | 1488 |
| BpmI | CTGGAG | 1 cut(s) | 350 |
| Bpu10I | CCTNAGC | 1 cut(s) | 462 |
| BpuEI | CTTGAG | 2 cut(s) | 376, 820 |
| BsaBI | GATNNNNATC | 3 cut(s) | 348, 660, 1176 |
| BsaJI | CCNNGG | 2 cut(s) | 620, 621 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 627 |
| Bse1I | ACTGG | 2 cut(s) | 1085, 1494 |
| Bse8I | GATNNNNATC | 3 cut(s) | 348, 660, 1176 |
| BseBI | CCWGG | 3 cut(s) | 225, 622, 1797 |
| BseDI | CCNNGG | 2 cut(s) | 620, 621 |
| BseGI | GGATG | 7 cut(s) | 349, 600, 715, 1096, 1396, 1489, 1531 |
| BseJI | GATNNNNATC | 3 cut(s) | 348, 660, 1176 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 627 |
| BseMII | CTCAG | 6 cut(s) | 312, 330, 453, 1239, 1746, 1787 |
| BseNI | ACTGG | 2 cut(s) | 1085, 1494 |
| BseRI | GAGGAG | 1 cut(s) | 996 |
| BseXI | GCAGC | 7 cut(s) | 292, 304, 1381, 1395, 1465, 1475, 1744 |
| BseYI | CCCAGC | 1 cut(s) | 994 |
| BsgI | GTGCAG | 1 cut(s) | 1380 |
| BshFI | GGCC | 4 cut(s) | 182, 232, 731, 1261 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1311, 1754 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 627 |
| BsmAI | GTCTC | 2 cut(s) | 563, 1751 |
| BsmI | GAATGC | 2 cut(s) | 1538, 1837 |
| BsnI | GGCC | 4 cut(s) | 182, 232, 731, 1261 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1311, 1754 |
| Bsp1407I | TGTACA | 1 cut(s) | 1278 |
| Bsp143I | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| BspANI | GGCC | 4 cut(s) | 182, 232, 731, 1261 |
| BspCNI | CTCAG | 6 cut(s) | 313, 331, 454, 1240, 1747, 1786 |
| BspHI | TCATGA | 1 cut(s) | 1267 |
| BspLI | GGNNCC | 1 cut(s) | 22 |
| BspMAI | CTGCAG | 1 cut(s) | 1465 |
| BspMI | ACCTGC | 1 cut(s) | 1441 |
| BspPI | GGATC | 4 cut(s) | 474, 956, 985, 1150 |
| BsrGI | TGTACA | 1 cut(s) | 1278 |
| BsrI | ACTGG | 2 cut(s) | 1085, 1494 |
| BssECI | CCNNGG | 2 cut(s) | 620, 621 |
| BssMI | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| Bst2UI | CCWGG | 3 cut(s) | 225, 622, 1797 |
| Bst4CI | ACNGT | 2 cut(s) | 277, 1658 |
| Bst6I | CTCTTC | 4 cut(s) | 183, 453, 938, 1605 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1678 |
| BstAUI | TGTACA | 1 cut(s) | 1278 |
| BstC8I | GCNNGC | 3 cut(s) | 161, 795, 1468 |
| BstDEI | CTNAG | 7 cut(s) | 177, 321, 339, 462, 1248, 1755, 1773 |
| BstF5I | GGATG | 7 cut(s) | 349, 600, 715, 1096, 1396, 1489, 1531 |
| BstHHI | GCGC | 1 cut(s) | 317 |
| BstKTI | GATC | 8 cut(s) | 352, 469, 664, 951, 993, 1004, 1145, 1460 |
| BstMAI | GTCTC | 2 cut(s) | 563, 1751 |
| BstMBI | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 41, 314, 1190, 1678 |
| BstNI | CCWGG | 3 cut(s) | 225, 622, 1797 |
| BstNSI | RCATGY | 2 cut(s) | 797, 1739 |
| BstSCI | CCNGG | 3 cut(s) | 223, 620, 1795 |
| BstSFI | CTRYAG | 2 cut(s) | 516, 1461 |
| BstV1I | GCAGC | 7 cut(s) | 292, 304, 1381, 1395, 1465, 1475, 1744 |
| BstX2I | RGATCY | 2 cut(s) | 466, 1457 |
| BstYI | RGATCY | 2 cut(s) | 466, 1457 |
| BsuRI | GGCC | 4 cut(s) | 182, 232, 731, 1261 |
| BtsCI | GGATG | 7 cut(s) | 349, 600, 715, 1096, 1396, 1489, 1531 |
| BtsIMutI | CAGTG | 2 cut(s) | 776, 1501 |
| BveI | ACCTGC | 1 cut(s) | 1441 |
| Cac8I | GCNNGC | 3 cut(s) | 161, 795, 1468 |
| CaiI | CAGNNNCTG | 3 cut(s) | 572, 767, 1060 |
| CciI | TCATGA | 1 cut(s) | 1267 |
| CfoI | GCGC | 1 cut(s) | 317 |
| Cfr13I | GGNCC | 4 cut(s) | 21, 230, 540, 730 |
| CseI | GACGC | 1 cut(s) | 1371 |
| Csp6I | GTAC | 1 cut(s) | 1279 |
| CviAII | CATG | 9 cut(s) | 211, 456, 794, 867, 1067, 1139, 1196, 1268, 1736 |
| CviQI | GTAC | 1 cut(s) | 1279 |
| DdeI | CTNAG | 7 cut(s) | 177, 321, 339, 462, 1248, 1755, 1773 |
| DpnI | GATC | 8 cut(s) | 351, 468, 663, 950, 992, 1003, 1144, 1459 |
| DpnII | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| Eam1104I | CTCTTC | 4 cut(s) | 183, 453, 938, 1605 |
| EarI | CTCTTC | 4 cut(s) | 183, 453, 938, 1605 |
| Ecl136II | GAGCTC | 1 cut(s) | 1752 |
| Eco24I | GRGCYC | 1 cut(s) | 1754 |
| Eco47I | GGWCC | 2 cut(s) | 21, 540 |
| Eco53kI | GAGCTC | 1 cut(s) | 1752 |
| Eco57I | CTGAAG | 4 cut(s) | 219, 491, 1322, 1629 |
| EcoICRI | GAGCTC | 1 cut(s) | 1752 |
| EcoO109I | RGGNCCY | 1 cut(s) | 730 |
| EcoRI | GAATTC | 1 cut(s) | 193 |
| EcoRII | CCWGG | 3 cut(s) | 223, 620, 1795 |
| EcoT22I | ATGCAT | 2 cut(s) | 491, 1068 |
| EcoT38I | GRGCYC | 1 cut(s) | 1754 |
| FaeI | CATG | 9 cut(s) | 214, 459, 797, 870, 1070, 1142, 1199, 1271, 1739 |
| FatI | CATG | 9 cut(s) | 210, 455, 793, 866, 1066, 1138, 1195, 1267, 1735 |
| FauNDI | CATATG | 1 cut(s) | 1587 |
| FblI | GTMKAC | 2 cut(s) | 519, 1162 |
| Fnu4HI | GCNGC | 7 cut(s) | 306, 318, 1395, 1409, 1464, 1479, 1733 |
| FokI | GGATG | 7 cut(s) | 356, 607, 722, 1103, 1403, 1476, 1538 |
| FriOI | GRGCYC | 1 cut(s) | 1754 |
| Fsp4HI | GCNGC | 7 cut(s) | 306, 318, 1395, 1409, 1464, 1479, 1733 |
| FspBI | CTAG | 6 cut(s) | 170, 362, 1218, 1314, 1686, 1849 |
| GlaI | GCGC | 1 cut(s) | 316 |
| GluI | GCNGC | 7 cut(s) | 306, 318, 1395, 1409, 1464, 1479, 1733 |
| GsaI | CCCAGC | 1 cut(s) | 998 |
| GsuI | CTGGAG | 1 cut(s) | 350 |
| HaeIII | GGCC | 4 cut(s) | 182, 232, 731, 1261 |
| HgaI | GACGC | 1 cut(s) | 1371 |
| HhaI | GCGC | 1 cut(s) | 317 |
| Hin1II | CATG | 9 cut(s) | 214, 459, 797, 870, 1070, 1142, 1199, 1271, 1739 |
| Hin6I | GCGC | 1 cut(s) | 315 |
| HinP1I | GCGC | 1 cut(s) | 315 |
| HinfI | GANTC | 8 cut(s) | 416, 494, 764, 1051, 1243, 1250, 1698, 1777 |
| HphI | GGTGA | 2 cut(s) | 952, 1811 |
| Hpy166II | GTNNAC | 3 cut(s) | 208, 520, 1163 |
| Hpy188III | TCNNGA | 6 cut(s) | 329, 1247, 1268, 1363, 1618, 1824 |
| Hpy8I | GTNNAC | 3 cut(s) | 208, 520, 1163 |
| Hpy99I | CGWCG | 1 cut(s) | 1387 |
| HpyAV | CCTTC | 3 cut(s) | 584, 852, 1297 |
| HpyCH4III | ACNGT | 2 cut(s) | 277, 1658 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 41, 314, 1190, 1678 |
| HpyF3I | CTNAG | 7 cut(s) | 177, 321, 339, 462, 1248, 1755, 1773 |
| Hsp92II | CATG | 9 cut(s) | 214, 459, 797, 870, 1070, 1142, 1199, 1271, 1739 |
| HspAI | GCGC | 1 cut(s) | 315 |
| Kzo9I | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| LmnI | GCTCC | 3 cut(s) | 911, 1306, 1749 |
| Lsp1109I | GCAGC | 7 cut(s) | 292, 304, 1381, 1395, 1465, 1475, 1744 |
| LweI | GCATC | 6 cut(s) | 22, 476, 763, 1053, 1381, 1489 |
| MaeI | CTAG | 6 cut(s) | 170, 362, 1218, 1314, 1686, 1849 |
| MaeIII | GTNAC | 4 cut(s) | 277, 356, 1076, 1603 |
| MalI | GATC | 8 cut(s) | 351, 468, 663, 950, 992, 1003, 1144, 1459 |
| MboI | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| MfeI | CAATTG | 4 cut(s) | 498, 1238, 1673, 1788 |
| MflI | RGATCY | 2 cut(s) | 466, 1457 |
| MhlI | GDGCHC | 2 cut(s) | 1311, 1754 |
| MlyI | GAGTC | 2 cut(s) | 1259, 1786 |
| MmeI | TCCRAC | 3 cut(s) | 460, 889, 1805 |
| Mph1103I | ATGCAT | 2 cut(s) | 491, 1068 |
| MroXI | GAANNNNTTC | 2 cut(s) | 615, 1035 |
| MseI | TTAA | 4 cut(s) | 387, 1209, 1352, 1599 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1494 |
| MspA1I | CMGCKG | 2 cut(s) | 537, 1466 |
| MspR9I | CCNGG | 3 cut(s) | 225, 622, 1797 |
| MunI | CAATTG | 4 cut(s) | 498, 1238, 1673, 1788 |
| Mva1269I | GAATGC | 2 cut(s) | 1538, 1837 |
| MvaI | CCWGG | 3 cut(s) | 225, 622, 1797 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 41, 314, 1190, 1678 |
| NdeI | CATATG | 1 cut(s) | 1587 |
| NdeII | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| NlaIII | CATG | 9 cut(s) | 214, 459, 797, 870, 1070, 1142, 1199, 1271, 1739 |
| NlaIV | GGNNCC | 1 cut(s) | 22 |
| NsiI | ATGCAT | 2 cut(s) | 491, 1068 |
| NspI | RCATGY | 2 cut(s) | 797, 1739 |
| PaeI | GCATGC | 1 cut(s) | 797 |
| PagI | TCATGA | 1 cut(s) | 1267 |
| PasI | CCCWGGG | 1 cut(s) | 621 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1511 |
| PctI | GAATGC | 2 cut(s) | 1538, 1837 |
| PdmI | GAANNNNTTC | 2 cut(s) | 615, 1035 |
| PfeI | GAWTC | 6 cut(s) | 416, 494, 764, 1051, 1243, 1698 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 627 |
| PkrI | GCNGC | 7 cut(s) | 307, 319, 1396, 1410, 1465, 1480, 1734 |
| PleI | GAGTC | 2 cut(s) | 1258, 1785 |
| PpsI | GAGTC | 2 cut(s) | 1258, 1785 |
| PshBI | ATTAAT | 1 cut(s) | 1352 |
| PsiI | TTATAA | 1 cut(s) | 98 |
| Psp124BI | GAGCTC | 1 cut(s) | 1754 |
| Psp6I | CCWGG | 3 cut(s) | 223, 620, 1795 |
| PspFI | CCCAGC | 1 cut(s) | 994 |
| PspGI | CCWGG | 3 cut(s) | 223, 620, 1795 |
| PspN4I | GGNNCC | 1 cut(s) | 22 |
| PspPI | GGNCC | 4 cut(s) | 21, 230, 540, 730 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 847, 879 |
| PstI | CTGCAG | 1 cut(s) | 1465 |
| PstNI | CAGNNNCTG | 3 cut(s) | 572, 767, 1060 |
| PsuI | RGATCY | 2 cut(s) | 466, 1457 |
| PvuII | CAGCTG | 2 cut(s) | 537, 1466 |
| RsaI | GTAC | 1 cut(s) | 1280 |
| RsaNI | GTAC | 1 cut(s) | 1279 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1494 |
| SacI | GAGCTC | 1 cut(s) | 1754 |
| SaqAI | TTAA | 4 cut(s) | 387, 1209, 1352, 1599 |
| SatI | GCNGC | 7 cut(s) | 306, 318, 1395, 1409, 1464, 1479, 1733 |
| Sau3AI | GATC | 8 cut(s) | 349, 466, 661, 948, 990, 1001, 1142, 1457 |
| Sau96I | GGNCC | 4 cut(s) | 21, 230, 540, 730 |
| SchI | GAGTC | 2 cut(s) | 1259, 1786 |
| ScrFI | CCNGG | 3 cut(s) | 225, 622, 1797 |
| SduI | GDGCHC | 2 cut(s) | 1311, 1754 |
| SfaNI | GCATC | 6 cut(s) | 22, 476, 763, 1053, 1381, 1489 |
| SfcI | CTRYAG | 2 cut(s) | 516, 1461 |
| SinI | GGWCC | 2 cut(s) | 21, 540 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1494 |
| SmlI | CTYRAG | 2 cut(s) | 391, 799 |
| SmoI | CTYRAG | 2 cut(s) | 391, 799 |
| SpeI | ACTAGT | 1 cut(s) | 169 |
| SphI | GCATGC | 1 cut(s) | 797 |
| SspMI | CTAG | 6 cut(s) | 170, 362, 1218, 1314, 1686, 1849 |
| SstI | GAGCTC | 1 cut(s) | 1754 |
| StyD4I | CCNGG | 3 cut(s) | 223, 620, 1795 |
| TaaI | ACNGT | 2 cut(s) | 277, 1658 |
| TaqI | TCGA | 4 cut(s) | 604, 1000, 1385, 1474 |
| TatI | WGTACW | 1 cut(s) | 1278 |
| TfiI | GAWTC | 6 cut(s) | 416, 494, 764, 1051, 1243, 1698 |
| Tru1I | TTAA | 4 cut(s) | 387, 1209, 1352, 1599 |
| Tru9I | TTAA | 4 cut(s) | 387, 1209, 1352, 1599 |
| TscAI | CASTG | 2 cut(s) | 783, 1501 |
| TseI | GCWGC | 7 cut(s) | 305, 317, 1394, 1408, 1463, 1478, 1732 |
| TspGWI | ACGGA | 1 cut(s) | 392 |
| TspRI | CASTG | 2 cut(s) | 783, 1501 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 627 |
| VpaK11BI | GGWCC | 2 cut(s) | 21, 540 |
| VspI | ATTAAT | 1 cut(s) | 1352 |
| XapI | RAATTY | 5 cut(s) | 193, 246, 257, 1084, 1519 |
| XceI | RCATGY | 2 cut(s) | 797, 1739 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1519 |
| XmiI | GTMKAC | 2 cut(s) | 519, 1162 |
| XmnI | GAANNNNTTC | 2 cut(s) | 615, 1035 |
| XspI | CTAG | 6 cut(s) | 170, 362, 1218, 1314, 1686, 1849 |
| Zsp2I | ATGCAT | 2 cut(s) | 491, 1068 |