Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007597

Physical Location & Seq

Genomic Coordinates Forward (+)

59523276 .. 59528541

Gene Structure 5266 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G034990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGAAGTTTATGAAGTTAGGGTCCAAGCCTGATGCGTTTCAAGCTGATGGCAAGTTGATCAGATATGTAACATCTGAGTTGGATTCAGATGTCATCGTAAAGGTTGGGGAAGTGCAATTTTACCTTCACAAGTTCCCTCTCCTTTCCAAGAGTAATCGCTTGCAAAAACTAGTACCTAAAGCCAATGAGGAGAAAGTCGTTGAAGTTTGCATGGATGATTTCCCTGGTGGGGCAAATTCCTTTGAAATCTGTGCAAAATTTTGCTATGGAATGACTGTTACTCTCAATGCCTACAATGTTGTGGCTGCTTGTTGTGCCGCTGAGTATCTGGAGATGACCGAGGATGTTGATCGCAGTAACCTGATATATAAAATTGAAGTATTCCTGAATTCAAGTATATTTCGTAGCTGGAAAGATACCATTATTGTTCTCCAAACCACCAAACCTCTTCTGTCATGGTCCGAGGGTCTGAAGATTGTCGGAAGATGCATAGATTCAATCGCTTCTAAAACTTCTGTAGACCCTGCAAATATCAGCTGGTCCTACACATACAACCGAAAATTAACAGAGCTTGATAAAATTATTGAAGAAGGGATTAATTATCGAGACAAAATGGAAAATATTCCAAGGGATTGGTGGGTTGAAGATATATGTGAGCTAGATATTGATCTCTACAGGCGTGTCATGATTGCTGTGAAATCAAAAGGACGAATGGATGGTGCTGTTATTGGGGAGGCTCTGAAAACTTATGCACTTAGATGGTTGCCAGATTCTGTTGATGTGTTGATTTCTGATGATCATGCATTGAGAAACAAATCTCTGGTAGAAACTATTATTTGTTTGTTGCCATCTGACAAAGGTGTGGGTTGTTCATGCAGTTTCTTGCTGAAACTTTTGAAAGTTAGTACTTTGGTTGGAGCAGATGAGTCATTGAGGGAGGTTCTGGTTAACAGGATTGGTTTGAAGTTACCTGAAGCTCGTGTTGGTGATTTATTGATCCCTGCTCGGTCTCCTCAAATTACTATTTATGATGTTGAATTGGTTCAGTCCATTGTGAATCGGTTTGTGATACATGAAAAGAGTAACTGGGATTTAGATGTTGTTCGGAAGAATGAAAAGGGTACTGATAATTTTATCTTGGGGCATGGATCCTTGGTGGGTGTTGGTAGACTGATTGATGGGTATCTTGCCGAAATTGCTCATGACCCTAATCTTAACCTTAGTAGTTTCATAGACTTGTCACAATTGCTTCCCGAGCTAGCGAGGCCAATTCATGATGGATTGTACAAAGCCATTGATATCTACCTGAAGGAGCACCCTAGTCTGACAAAGGCTGAAAGGAAAAGAATATGTGGATTAATGGATGCCAAGAAACTGACAATGGAGGCATCCATGGATGCCGCACAGAACGAGCAGCTTCCACTGCGAGTTGTTGTCCAAGTTCTCTTTTTTGAGCAGGTGAGATCTTCAGCTGCTGCTCGGTCCCTTAACAACCATCCATCCGATGCTTCACATTCCACCACAAATTTGGATGAAGAATGTGACAAGACAGCAGCAGAAGAAAACTGCAAGCCTTTAGGAAAACAGCTGAGTCAAATGAAGGCAAGCGAAGAGTTGCAGAAGAATGGGAAATTGGGTAAGAAGAACAGCAAGAATAGTAGAAGTGGTGTGCAGTTGTTGCCGTCTAGGTCAAGGAGGATATTTGACAAGTTATGGTCTGTGGGGAAGGGGGGGCATGGAGAGAACAAGAGCTCGGAGACTTCTGGGAGTTCTCAGAGCCCAACTTCTATAGTTCCTGGTGATTCCAAGTCTGTTTCATCGAGACACAGGAGGCATTCTATATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005886 GO:0006810 GO:0007275 GO:0008104 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009911 GO:0009914 GO:0009926 GO:0010154 GO:0010229 GO:0010540 GO:0010817 GO:0012505 GO:0016020 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0033036 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0045176 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051094 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071944 GO:0090567 GO:0097708 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

615

Amino Acids

68.63

Weight (kDa)

7.52

Isoelectric Point (pI)

41.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	27 - 117	5.4e-06	BTB/POZ domain
NPH3	PF03000	211 - 464	6.9e-84	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31820 AT4G31820
fragaria_vesca	FvH4_2g41130 FvH4_2g41130 FvH4_2g41130 FvH4_2g41130
malus_domestica	MD08G1057100.v1.1 MD15G1040500.v1.1 MD15G1040600.v1.1
prunus_persica	Prupe.1G393800_v2.0.a1
pyrus_communis	pycom08g04650 pycom08g04660 pycom15g03780
rosa_chinensis	RchiOBHm_Chr5g0077711 RchiOBHm_Chr6g0299411
rosa_laevigata	RLG00000011434
rosa_multiflora	Rmu_co8314217.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168710
rosa_rugosa	Rorug06G0288000
rosa_samantha	Rh6AG399800 Rh6BG408200 Rh6CG413900 Rh6DG400900
rosa_wichuraiana	Rw6G034990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1447
Acc36I	ACCTGC	1 cut(s)	1447
AccI	GTMKAC	2 cut(s)	519, 1168
AciI	CCGC	2 cut(s)	318, 1401
AclWI	GGATC	3 cut(s)	991, 1143, 1156
AcsI	RAATTY	4 cut(s)	235, 257, 388, 1525
AcuI	CTGAAG	4 cut(s)	491, 993, 1328, 1452
AfaI	GTAC	4 cut(s)	174, 907, 1123, 1286
AfiI	CCNNNNNNNGG	1 cut(s)	229
AhlI	ACTAGT	1 cut(s)	169
AjnI	CCWGG	2 cut(s)	223, 1795
AjuI	GAANNNNNNNTTGG	4 cut(s)	966, 998, 1616, 1648
Alw21I	GWGCWC	2 cut(s)	1317, 1754
Alw26I	GTCTC	4 cut(s)	600, 1014, 1751, 1816
AlwI	GGATC	3 cut(s)	991, 1143, 1156
AlwNI	CAGNNNCTG	2 cut(s)	773, 1475
Ama87I	CYCGRG	1 cut(s)	1253
AoxI	GGCC	1 cut(s)	1265
ApeKI	GCWGC	5 cut(s)	305, 1414, 1472, 1475, 1553
ApoI	RAATTY	4 cut(s)	235, 257, 388, 1525
AseI	ATTAAT	2 cut(s)	597, 1358
Asp700I	GAANNNNTTC	2 cut(s)	621, 1041
AspS9I	GGNCC	4 cut(s)	21, 459, 540, 1482
AsuHPI	GGTGA	3 cut(s)	998, 1471, 1811
AsuNHI	GCTAGC	1 cut(s)	1258
AvaI	CYCGRG	1 cut(s)	1253
AvaII	GGWCC	4 cut(s)	21, 459, 540, 1482
BamHI	GGATCC	1 cut(s)	1148
BanII	GRGCYC	2 cut(s)	1754, 1781
BauI	CACGAG	1 cut(s)	978
Bbv12I	GWGCWC	2 cut(s)	1317, 1754
BbvI	GCAGC	5 cut(s)	292, 1426, 1459, 1462, 1565
BccI	CCATC	8 cut(s)	41, 710, 753, 856, 1172, 1271, 1503, 1507
BceAI	ACGGC	1 cut(s)	1666
BciT130I	CCWGG	2 cut(s)	225, 1797
BclI	TGATCA	2 cut(s)	57, 796
BcoDI	GTCTC	4 cut(s)	600, 1014, 1751, 1816
BcuI	ACTAGT	1 cut(s)	169
BfaI	CTAG	6 cut(s)	170, 659, 1259, 1320, 1686, 1846
BfmI	CTRYAG	3 cut(s)	516, 673, 1788
BfuAI	ACCTGC	1 cut(s)	1447
BglII	AGATCT	1 cut(s)	1463
BisI	GCNGC	7 cut(s)	306, 318, 1401, 1415, 1473, 1476, 1554
BlsI	GCNGC	7 cut(s)	307, 319, 1402, 1416, 1474, 1477, 1555
BmcAI	AGTACT	1 cut(s)	907
Bme1390I	CCNGG	2 cut(s)	225, 1797
Bme18I	GGWCC	4 cut(s)	21, 459, 540, 1482
BmeT110I	CYCGRG	1 cut(s)	1253
BmgT120I	GGNCC	4 cut(s)	21, 459, 540, 1482
BmiI	GGNNCC	3 cut(s)	22, 1150, 1484
BmrFI	CCNGG	2 cut(s)	225, 1797
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	6 cut(s)	22, 476, 1354, 1387, 1397, 1495
BmtI	GCTAGC	1 cut(s)	1262
BmuI	ACTGGG	1 cut(s)	1096
BpmI	CTGGAG	1 cut(s)	350
BsaBI	GATNNNNATC	3 cut(s)	348, 666, 1182
BsaI	GGTCTC	1 cut(s)	1014
BsaJI	CCNNGG	6 cut(s)	223, 339, 462, 626, 1152, 1392
Bsc4I	CCNNNNNNNGG	1 cut(s)	229
Bse1I	ACTGG	1 cut(s)	1091
Bse8I	GATNNNNATC	3 cut(s)	348, 666, 1182
BseBI	CCWGG	2 cut(s)	225, 1797
BseDI	CCNNGG	6 cut(s)	223, 339, 462, 626, 1152, 1392
BseGI	GGATG	9 cut(s)	220, 349, 721, 1369, 1388, 1402, 1495, 1499, 1537
BseJI	GATNNNNATC	3 cut(s)	348, 666, 1182
BseLI	CCNNNNNNNGG	1 cut(s)	229
BseMII	CTCAG	4 cut(s)	66, 312, 1580, 1787
BseNI	ACTGG	1 cut(s)	1091
BseRI	GAGGAG	2 cut(s)	203, 1002
BseXI	GCAGC	5 cut(s)	292, 1426, 1459, 1462, 1565
BsgI	GTGCAG	1 cut(s)	1691
BshFI	GGCC	1 cut(s)	1267
BsiHKAI	GWGCWC	2 cut(s)	1317, 1754
BsiHKCI	CYCGRG	1 cut(s)	1253
BslFI	GGGAC	1 cut(s)	1468
BslI	CCNNNNNNNGG	1 cut(s)	229
BsmAI	GTCTC	4 cut(s)	600, 1014, 1751, 1816
BsmFI	GGGAC	1 cut(s)	1468
BsmI	GAATGC	1 cut(s)	1834
BsnI	GGCC	1 cut(s)	1267
Bso31I	GGTCTC	1 cut(s)	1014
BsoBI	CYCGRG	1 cut(s)	1253
Bsp1286I	GDGCHC	3 cut(s)	1317, 1754, 1781
Bsp1407I	TGTACA	1 cut(s)	1284
Bsp143I	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
Bsp19I	CCATGG	1 cut(s)	1392
BspACI	CCGC	2 cut(s)	318, 1401
BspANI	GGCC	1 cut(s)	1267
BspCNI	CTCAG	4 cut(s)	67, 313, 1581, 1786
BspHI	TCATGA	3 cut(s)	684, 1201, 1273
BspLI	GGNNCC	3 cut(s)	22, 1150, 1484
BspMI	ACCTGC	1 cut(s)	1447
BspOI	GCTAGC	1 cut(s)	1262
BspPI	GGATC	3 cut(s)	991, 1143, 1156
BspTNI	GGTCTC	1 cut(s)	1014
BsrGI	TGTACA	1 cut(s)	1284
BsrI	ACTGG	1 cut(s)	1091
BssECI	CCNNGG	6 cut(s)	223, 339, 462, 626, 1152, 1392
BssMI	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
BssSI	CACGAG	1 cut(s)	978
BssT1I	CCWWGG	3 cut(s)	626, 1152, 1392
Bst2BI	CACGAG	1 cut(s)	978
Bst2UI	CCWGG	2 cut(s)	225, 1797
Bst4CI	ACNGT	1 cut(s)	277
Bst6I	CTCTTC	2 cut(s)	453, 1605
BstAPI	GCANNNNNTGC	1 cut(s)	1678
BstAUI	TGTACA	1 cut(s)	1284
BstC8I	GCNNGC	4 cut(s)	161, 1260, 1571, 1606
BstDEI	CTNAG	6 cut(s)	75, 321, 755, 1220, 1589, 1773
BstDSI	CCRYGG	1 cut(s)	1392
BstF5I	GGATG	9 cut(s)	220, 349, 721, 1369, 1388, 1402, 1495, 1499, 1537
BstKTI	GATC	7 cut(s)	60, 352, 670, 799, 999, 1151, 1466
BstMAI	GTCTC	4 cut(s)	600, 1014, 1751, 1816
BstMBI	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 314, 1196, 1255, 1264, 1423, 1678
BstNI	CCWGG	2 cut(s)	225, 1797
BstSCI	CCNGG	2 cut(s)	223, 1795
BstSFI	CTRYAG	3 cut(s)	516, 673, 1788
BstV1I	GCAGC	5 cut(s)	292, 1426, 1459, 1462, 1565
BstX2I	RGATCY	2 cut(s)	1148, 1463
BstXI	CCANNNNNNTGG	2 cut(s)	633, 1528
BstYI	RGATCY	2 cut(s)	1148, 1463
BsuRI	GGCC	1 cut(s)	1267
BtgI	CCRYGG	1 cut(s)	1392
BtsCI	GGATG	9 cut(s)	220, 349, 721, 1369, 1388, 1402, 1495, 1499, 1537
BtsI	GCAGTG	1 cut(s)	1421
BtsIMutI	CAGTG	1 cut(s)	1421
BveI	ACCTGC	1 cut(s)	1447
Cac8I	GCNNGC	4 cut(s)	161, 1260, 1571, 1606
CaiI	CAGNNNCTG	2 cut(s)	773, 1475
CciI	TCATGA	3 cut(s)	684, 1201, 1273
Cfr13I	GGNCC	4 cut(s)	21, 459, 540, 1482
Csp6I	GTAC	4 cut(s)	173, 906, 1122, 1285
CviQI	GTAC	4 cut(s)	173, 906, 1122, 1285
DdeI	CTNAG	6 cut(s)	75, 321, 755, 1220, 1589, 1773
DpnI	GATC	7 cut(s)	59, 351, 669, 798, 998, 1150, 1465
DpnII	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
Eam1104I	CTCTTC	2 cut(s)	453, 1605
EarI	CTCTTC	2 cut(s)	453, 1605
Ecl136II	GAGCTC	1 cut(s)	1752
Eco130I	CCWWGG	3 cut(s)	626, 1152, 1392
Eco24I	GRGCYC	2 cut(s)	1754, 1781
Eco31I	GGTCTC	1 cut(s)	1014
Eco32I	GATATC	1 cut(s)	1300
Eco47I	GGWCC	4 cut(s)	21, 459, 540, 1482
Eco53kI	GAGCTC	1 cut(s)	1752
Eco57I	CTGAAG	4 cut(s)	491, 993, 1328, 1452
Eco88I	CYCGRG	1 cut(s)	1253
EcoICRI	GAGCTC	1 cut(s)	1752
EcoRI	GAATTC	1 cut(s)	388
EcoRII	CCWGG	2 cut(s)	223, 1795
EcoRV	GATATC	1 cut(s)	1300
EcoT14I	CCWWGG	3 cut(s)	626, 1152, 1392
EcoT22I	ATGCAT	2 cut(s)	491, 805
EcoT38I	GRGCYC	2 cut(s)	1754, 1781
ErhI	CCWWGG	3 cut(s)	626, 1152, 1392
FaqI	GGGAC	1 cut(s)	1468
FbaI	TGATCA	2 cut(s)	57, 796
FblI	GTMKAC	2 cut(s)	519, 1168
Fnu4HI	GCNGC	7 cut(s)	306, 318, 1401, 1415, 1473, 1476, 1554
FokI	GGATG	9 cut(s)	227, 356, 728, 1375, 1376, 1409, 1482, 1486, 1544
FriOI	GRGCYC	2 cut(s)	1754, 1781
Fsp4HI	GCNGC	7 cut(s)	306, 318, 1401, 1415, 1473, 1476, 1554
FspBI	CTAG	6 cut(s)	170, 659, 1259, 1320, 1686, 1846
GluI	GCNGC	7 cut(s)	306, 318, 1401, 1415, 1473, 1476, 1554
GsuI	CTGGAG	1 cut(s)	350
HaeIII	GGCC	1 cut(s)	1267
HincII	GTYRAC	1 cut(s)	949
HindII	GTYRAC	1 cut(s)	949
HinfI	GANTC	7 cut(s)	83, 494, 770, 926, 1057, 1591, 1802
HpaI	GTTAAC	1 cut(s)	949
HphI	GGTGA	3 cut(s)	998, 1471, 1811
Hpy166II	GTNNAC	3 cut(s)	520, 949, 1169
Hpy188III	TCNNGA	8 cut(s)	329, 385, 605, 685, 1202, 1253, 1274, 1821
Hpy8I	GTNNAC	3 cut(s)	520, 949, 1169
HpyAV	CCTTC	5 cut(s)	134, 584, 1303, 1594, 1720
HpyCH4III	ACNGT	1 cut(s)	277
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 314, 1196, 1255, 1264, 1423, 1678
HpyF3I	CTNAG	6 cut(s)	75, 321, 755, 1220, 1589, 1773
Ksp22I	TGATCA	2 cut(s)	57, 796
KspAI	GTTAAC	1 cut(s)	949
Kzo9I	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
LmnI	GCTCC	2 cut(s)	917, 1312
Lsp1109I	GCAGC	5 cut(s)	292, 1426, 1459, 1462, 1565
LweI	GCATC	6 cut(s)	22, 476, 1354, 1387, 1397, 1495
MaeI	CTAG	6 cut(s)	170, 659, 1259, 1320, 1686, 1846
MaeIII	GTNAC	7 cut(s)	67, 277, 356, 966, 1082, 1239, 1541
MalI	GATC	7 cut(s)	59, 351, 669, 798, 998, 1150, 1465
MboI	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
MfeI	CAATTG	1 cut(s)	1244
MflI	RGATCY	2 cut(s)	1148, 1463
MhlI	GDGCHC	3 cut(s)	1317, 1754, 1781
MlyI	GAGTC	2 cut(s)	935, 1600
MmeI	TCCRAC	3 cut(s)	60, 460, 895
Mph1103I	ATGCAT	2 cut(s)	491, 805
MroXI	GAANNNNTTC	2 cut(s)	621, 1041
MseI	TTAA	6 cut(s)	563, 597, 948, 1215, 1358, 1488
MslI	CAYNNNNRTG	1 cut(s)	757
MspA1I	CMGCKG	4 cut(s)	320, 537, 1472, 1588
MspR9I	CCNGG	2 cut(s)	225, 1797
MunI	CAATTG	1 cut(s)	1244
Mva1269I	GAATGC	1 cut(s)	1834
MvaI	CCWGG	2 cut(s)	225, 1797
MwoI	GCNNNNNNNGC	7 cut(s)	41, 314, 1196, 1255, 1264, 1423, 1678
NcoI	CCATGG	1 cut(s)	1392
NdeII	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
NheI	GCTAGC	1 cut(s)	1258
NlaIV	GGNNCC	3 cut(s)	22, 1150, 1484
NmuCI	GTSAC	2 cut(s)	1239, 1541
NsiI	ATGCAT	2 cut(s)	491, 805
PagI	TCATGA	3 cut(s)	684, 1201, 1273
PaqCI	CACCTGC	1 cut(s)	1447
PctI	GAATGC	1 cut(s)	1834
PdmI	GAANNNNTTC	2 cut(s)	621, 1041
PfeI	GAWTC	5 cut(s)	83, 494, 770, 1057, 1802
PkrI	GCNGC	7 cut(s)	307, 319, 1402, 1416, 1474, 1477, 1555
PleI	GAGTC	2 cut(s)	934, 1599
PpsI	GAGTC	2 cut(s)	934, 1599
PshBI	ATTAAT	2 cut(s)	597, 1358
Psp124BI	GAGCTC	1 cut(s)	1754
Psp6I	CCWGG	2 cut(s)	223, 1795
PspGI	CCWGG	2 cut(s)	223, 1795
PspN4I	GGNNCC	3 cut(s)	22, 1150, 1484
PspPI	GGNCC	4 cut(s)	21, 459, 540, 1482
PstNI	CAGNNNCTG	2 cut(s)	773, 1475
PsuI	RGATCY	2 cut(s)	1148, 1463
PvuII	CAGCTG	3 cut(s)	537, 1472, 1588
RsaI	GTAC	4 cut(s)	174, 907, 1123, 1286
RsaNI	GTAC	4 cut(s)	173, 906, 1122, 1285
RseI	CAYNNNNRTG	1 cut(s)	757
SacI	GAGCTC	1 cut(s)	1754
SaqAI	TTAA	6 cut(s)	563, 597, 948, 1215, 1358, 1488
SatI	GCNGC	7 cut(s)	306, 318, 1401, 1415, 1473, 1476, 1554
Sau3AI	GATC	7 cut(s)	57, 349, 667, 796, 996, 1148, 1463
Sau96I	GGNCC	4 cut(s)	21, 459, 540, 1482
ScaI	AGTACT	1 cut(s)	907
SchI	GAGTC	2 cut(s)	935, 1600
ScrFI	CCNGG	2 cut(s)	225, 1797
SduI	GDGCHC	3 cut(s)	1317, 1754, 1781
SfaNI	GCATC	6 cut(s)	22, 476, 1354, 1387, 1397, 1495
SfcI	CTRYAG	3 cut(s)	516, 673, 1788
SinI	GGWCC	4 cut(s)	21, 459, 540, 1482
SmiMI	CAYNNNNRTG	1 cut(s)	757
SpeI	ACTAGT	1 cut(s)	169
SsiI	CCGC	2 cut(s)	318, 1401
SspI	AATATT	1 cut(s)	622
SspMI	CTAG	6 cut(s)	170, 659, 1259, 1320, 1686, 1846
SstI	GAGCTC	1 cut(s)	1754
StyD4I	CCNGG	2 cut(s)	223, 1795
StyI	CCWWGG	3 cut(s)	626, 1152, 1392
TaaI	ACNGT	1 cut(s)	277
TaqI	TCGA	2 cut(s)	604, 1820
TaqII	GACCGA	3 cut(s)	353, 996, 1470
TatI	WGTACW	2 cut(s)	905, 1284
TauI	GCSGC	2 cut(s)	320, 1403
TfiI	GAWTC	5 cut(s)	83, 494, 770, 1057, 1802
Tru1I	TTAA	6 cut(s)	563, 597, 948, 1215, 1358, 1488
Tru9I	TTAA	6 cut(s)	563, 597, 948, 1215, 1358, 1488
TscAI	CASTG	1 cut(s)	1428
TseFI	GTSAC	2 cut(s)	1239, 1541
TseI	GCWGC	5 cut(s)	305, 1414, 1472, 1475, 1553
Tsp45I	GTSAC	2 cut(s)	1239, 1541
TspRI	CASTG	1 cut(s)	1428
VpaK11BI	GGWCC	4 cut(s)	21, 459, 540, 1482
VspI	ATTAAT	2 cut(s)	597, 1358
XapI	RAATTY	4 cut(s)	235, 257, 388, 1525
XcmI	CCANNNNNNNNNTGG	2 cut(s)	633, 1525
XmiI	GTMKAC	2 cut(s)	519, 1168
XmnI	GAANNNNTTC	2 cut(s)	621, 1041
XspI	CTAG	6 cut(s)	170, 659, 1259, 1320, 1686, 1846
ZrmI	AGTACT	1 cut(s)	907
Zsp2I	ATGCAT	2 cut(s)	491, 805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.