Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007597

Physical Location & Seq

Genomic Coordinates Reverse (-)

9423607 .. 9427634

Gene Structure 4028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011434

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1845 bp

ATGAAGTTTATGAAGTTAGGGTCCAAGCCTGATGCGTTTCAAGCTGATGGCAAGTTGATCAGATATGTAACATCTGAGTTGGATTCAGATGTCATCGTAAAGGTTGGGGAAGTGCAATTTTACCTTCACAAGTTCCCTCTCCTTTCCAAGAGTAATCGCTTGCAAAAACTAGTACCTAAAGCCAATGAGGAGAAAGTCGTCGAAGTTTGCATGGATGATTTCCCTGGTGGGGCAAATTCCTTTGAAGTCTGTGCAAAATTTTGCTATGGAATGACTGTTACTCTCAATGCTTACAATGTTGTGGCTGCTCGTTGTGCTGCTGAGTATCTGGAGATGACCGAGGATGTTGATCGCAGTAACCTGATATATAAAATTGAAGTATTCCTTAATTCAAGTATATTTCGTAGCTGGAAAGATACCATTATTGTTCTCCAAACCACCAAACCTCTTCTGTCATGGTCTGAGGATCTGAAGATTGTCGGAAGATGCATAGATTCAATCGCTTCTAAAACTTCTGTCGACCCTGCAAATATCAGCTGGTCCTACACATACAACCGAAAATTAACAGAGCCTGATAAAATTATTGAAGAAGGGATTAATTATCGAGACAAAATGGAAAATATTCCAAGGGATTGGTGGGTTGAAGATATATGTGAGCTAGATATTGATCTCTACAGGCGTGTCATGATTGCTGTGAAATCAAAAGGAAGGATGGATGGTGCCGTTATTGGGGAGGCTCTGAAAACTTATGCACTTAGATGGTTGCCAGATTCTGTTGATGCGTTGATTTCTGATGATCATGCATTGAGAAACAAATCTCTGGTAGAAACTATTATTTGTTTATTGCCATCTGACAAAGGTGTGGGTTGTTCATGCAGTTTCTTGCTGAAACTTTTGAAAGTTAGTACTTTGGTTGGAGCAGATGAGTCATTGAGGGAGGTTCTGGTTAACAGGATTGGTTTGAAGTTACCTGAAGCTCGTGTTGGTGATTTATTGATCCCTGCTCGGTCTCCTCAAATTACTATTTATGATGTTGAATTGGTTCAGTCCATTGTGAATCGGTTTGTGATACATGAAAAGAGTAACTGGGATTTAGATGTTATTCGGAAGAATGAAAAGGGTACTAATAATTTTCTCTTGGGGCATGGATCCTTGGTGGGTGTTGGTAGACTGATTGATGGGTATCTTGCCGAAATTGCTCATGACCCTAATCTTAACCTTGGTAGTTTCATAGACTTGTCACAATTGCTTCCCGAGTTATCGAGGCCAATTCATGATGGATTGTACAAAGCCATTGATATCTACCTGAAGGAGCACCCTAGTCTGACAAAGGCTGAAAGGAAAAGAATATGTGGATTAATGGATGTCAAGAAACTGACAATGGAGGCATCCATGGATGCTGCACAGAACGAGCAGCTTCCACTGCGAGTTGTTGTCCAAGTTCTCTTTTTTGAGCAGGTGAGATCTTCAGCTGCTGCTCAGTCCCTTAACAACCATCCAGCCGATGCTTCACATTCCACCACAAATTTGGATGAAGAATGTGACAAGACAGCAGAAGAAAACTGCAAACCTCTAGGAAAACAGCTGAGTCAAATGAAGGTAAGTGAAGAGTTGCAGAAGAATGGGAAATTGGGTAAGAAGCACAGCAAGAATAGCAGAAGTGGTGCGCAGTTGTTGCCGTCTAGGTCAAGGAGGATATTTGACAAGTTATGGTCTGTGGGGAAGGGGGGGCATGGAGAGAACAAGAGCTCGGAGACTTCTGGGAGTTCTCAGAGCCCAACTTCTATAGTTCCTGGTGATTCCAAGTCCGTTTCATCAAGACACAGGAGGCACTCTATATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005886 GO:0006810 GO:0007275 GO:0008104 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009911 GO:0009914 GO:0009926 GO:0010154 GO:0010229 GO:0010540 GO:0010817 GO:0012505 GO:0016020 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0033036 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0045176 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051094 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071944 GO:0090567 GO:0097708 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

615

Amino Acids

68.62

Weight (kDa)

7.54

Isoelectric Point (pI)

40.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	211 - 464	2e-83	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31820 AT4G31820
fragaria_vesca	FvH4_2g41130 FvH4_2g41130 FvH4_2g41130 FvH4_2g41130
malus_domestica	MD08G1057100.v1.1 MD15G1040500.v1.1 MD15G1040600.v1.1
prunus_persica	Prupe.1G393800_v2.0.a1
pyrus_communis	pycom08g04650 pycom08g04660 pycom15g03780
rosa_chinensis	RchiOBHm_Chr5g0077711 RchiOBHm_Chr6g0299411
rosa_laevigata	RLG00000011434
rosa_multiflora	Rmu_co8314217.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168710
rosa_rugosa	Rorug06G0288000
rosa_samantha	Rh6AG399800 Rh6BG408200 Rh6CG413900 Rh6DG400900
rosa_wichuraiana	Rw6G034990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1447
Acc16I	TGCGCA	1 cut(s)	1668
Acc36I	ACCTGC	1 cut(s)	1447
AccB1I	GGYRCC	1 cut(s)	719
AccI	GTMKAC	2 cut(s)	519, 1168
AclWI	GGATC	4 cut(s)	474, 991, 1143, 1156
AcsI	RAATTY	3 cut(s)	235, 257, 1525
AcuI	CTGAAG	4 cut(s)	491, 993, 1328, 1452
AfaI	GTAC	4 cut(s)	174, 907, 1123, 1286
AfiI	CCNNNNNNNGG	2 cut(s)	229, 729
AhlI	ACTAGT	1 cut(s)	169
AjnI	CCWGG	2 cut(s)	223, 1792
AjuI	GAANNNNNNNTTGG	4 cut(s)	966, 998, 1613, 1645
AluBI	AGCT	9 cut(s)	44, 408, 537, 658, 977, 1417, 1472, 1585, 1749
AluI	AGCT	9 cut(s)	44, 408, 537, 658, 977, 1417, 1472, 1585, 1749
Alw21I	GWGCWC	2 cut(s)	1317, 1751
Alw26I	GTCTC	3 cut(s)	600, 1014, 1748
AlwI	GGATC	4 cut(s)	474, 991, 1143, 1156
AlwNI	CAGNNNCTG	3 cut(s)	572, 773, 1475
Ama87I	CYCGRG	1 cut(s)	1253
AoxI	GGCC	1 cut(s)	1265
ApeKI	GCWGC	6 cut(s)	305, 317, 1400, 1414, 1472, 1475
ApoI	RAATTY	3 cut(s)	235, 257, 1525
AseI	ATTAAT	2 cut(s)	597, 1358
Asp700I	GAANNNNTTC	2 cut(s)	621, 1041
AspLEI	GCGC	1 cut(s)	1669
AspS9I	GGNCC	2 cut(s)	21, 540
AsuHPI	GGTGA	3 cut(s)	998, 1471, 1808
AvaI	CYCGRG	1 cut(s)	1253
AvaII	GGWCC	2 cut(s)	21, 540
BamHI	GGATCC	1 cut(s)	1148
BanI	GGYRCC	1 cut(s)	719
BanII	GRGCYC	2 cut(s)	1751, 1778
BauI	CACGAG	1 cut(s)	978
Bbv12I	GWGCWC	2 cut(s)	1317, 1751
BbvI	GCAGC	6 cut(s)	292, 304, 1387, 1426, 1459, 1462
BccI	CCATC	8 cut(s)	41, 706, 710, 753, 856, 1172, 1271, 1503
BceAI	ACGGC	2 cut(s)	707, 1663
BciT130I	CCWGG	2 cut(s)	225, 1794
BclI	TGATCA	2 cut(s)	57, 796
BcoDI	GTCTC	3 cut(s)	600, 1014, 1748
BcuI	ACTAGT	1 cut(s)	169
BfaI	CTAG	6 cut(s)	170, 659, 1320, 1574, 1683, 1843
BfmI	CTRYAG	2 cut(s)	673, 1785
BfuAI	ACCTGC	1 cut(s)	1447
BglII	AGATCT	1 cut(s)	1463
BisI	GCNGC	6 cut(s)	306, 318, 1401, 1415, 1473, 1476
BlsI	GCNGC	6 cut(s)	307, 319, 1402, 1416, 1474, 1477
BmcAI	AGTACT	1 cut(s)	907
Bme1390I	CCNGG	2 cut(s)	225, 1794
Bme18I	GGWCC	2 cut(s)	21, 540
BmeT110I	CYCGRG	1 cut(s)	1253
BmgT120I	GGNCC	2 cut(s)	21, 540
BmiI	GGNNCC	3 cut(s)	22, 721, 1150
BmrFI	CCNGG	2 cut(s)	225, 1794
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	6 cut(s)	22, 476, 769, 1387, 1397, 1495
BmuI	ACTGGG	1 cut(s)	1096
BpmI	CTGGAG	1 cut(s)	350
BsaBI	GATNNNNATC	3 cut(s)	348, 666, 1182
BsaI	GGTCTC	1 cut(s)	1014
BsaJI	CCNNGG	6 cut(s)	223, 339, 626, 1152, 1219, 1392
Bsc4I	CCNNNNNNNGG	2 cut(s)	229, 729
Bse1I	ACTGG	1 cut(s)	1091
Bse8I	GATNNNNATC	3 cut(s)	348, 666, 1182
BseBI	CCWGG	2 cut(s)	225, 1794
BseDI	CCNNGG	6 cut(s)	223, 339, 626, 1152, 1219, 1392
BseGI	GGATG	9 cut(s)	220, 349, 717, 721, 1369, 1388, 1402, 1495, 1537
BseJI	GATNNNNATC	3 cut(s)	348, 666, 1182
BseLI	CCNNNNNNNGG	2 cut(s)	229, 729
BseMII	CTCAG	6 cut(s)	66, 312, 453, 1493, 1577, 1784
BseNI	ACTGG	1 cut(s)	1091
BseRI	GAGGAG	2 cut(s)	203, 1002
BseXI	GCAGC	6 cut(s)	292, 304, 1387, 1426, 1459, 1462
BsgI	GTGCAG	1 cut(s)	1386
BshFI	GGCC	1 cut(s)	1267
BshNI	GGYRCC	1 cut(s)	719
BsiHKAI	GWGCWC	2 cut(s)	1317, 1751
BsiHKCI	CYCGRG	1 cut(s)	1253
BslFI	GGGAC	1 cut(s)	1468
BslI	CCNNNNNNNGG	2 cut(s)	229, 729
BsmAI	GTCTC	3 cut(s)	600, 1014, 1748
BsmFI	GGGAC	1 cut(s)	1468
BsnI	GGCC	1 cut(s)	1267
Bso31I	GGTCTC	1 cut(s)	1014
BsoBI	CYCGRG	1 cut(s)	1253
Bsp1286I	GDGCHC	3 cut(s)	1317, 1751, 1778
Bsp1407I	TGTACA	1 cut(s)	1284
Bsp143I	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
Bsp19I	CCATGG	1 cut(s)	1392
BspANI	GGCC	1 cut(s)	1267
BspCNI	CTCAG	6 cut(s)	67, 313, 454, 1492, 1578, 1783
BspHI	TCATGA	3 cut(s)	684, 1201, 1273
BspLI	GGNNCC	3 cut(s)	22, 721, 1150
BspMI	ACCTGC	1 cut(s)	1447
BspPI	GGATC	4 cut(s)	474, 991, 1143, 1156
BspT107I	GGYRCC	1 cut(s)	719
BspTNI	GGTCTC	1 cut(s)	1014
BsrGI	TGTACA	1 cut(s)	1284
BsrI	ACTGG	1 cut(s)	1091
BssECI	CCNNGG	6 cut(s)	223, 339, 626, 1152, 1219, 1392
BssMI	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
BssSI	CACGAG	1 cut(s)	978
BssT1I	CCWWGG	4 cut(s)	626, 1152, 1219, 1392
Bst2BI	CACGAG	1 cut(s)	978
Bst2UI	CCWGG	2 cut(s)	225, 1794
Bst4CI	ACNGT	1 cut(s)	277
Bst6I	CTCTTC	2 cut(s)	453, 1602
BstAPI	GCANNNNNTGC	1 cut(s)	1675
BstAUI	TGTACA	1 cut(s)	1284
BstC8I	GCNNGC	1 cut(s)	161
BstDEI	CTNAG	7 cut(s)	75, 321, 462, 755, 1479, 1586, 1770
BstDSI	CCRYGG	1 cut(s)	1392
BstF5I	GGATG	9 cut(s)	220, 349, 717, 721, 1369, 1388, 1402, 1495, 1537
BstHHI	GCGC	1 cut(s)	1669
BstKTI	GATC	8 cut(s)	60, 352, 469, 670, 799, 999, 1151, 1466
BstMAI	GTCTC	3 cut(s)	600, 1014, 1748
BstMBI	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
BstMWI	GCNNNNNNNGC	6 cut(s)	41, 314, 1196, 1423, 1653, 1675
BstNI	CCWGG	2 cut(s)	225, 1794
BstSCI	CCNGG	2 cut(s)	223, 1792
BstSFI	CTRYAG	2 cut(s)	673, 1785
BstV1I	GCAGC	6 cut(s)	292, 304, 1387, 1426, 1459, 1462
BstX2I	RGATCY	3 cut(s)	466, 1148, 1463
BstXI	CCANNNNNNTGG	2 cut(s)	633, 1528
BstYI	RGATCY	3 cut(s)	466, 1148, 1463
BsuRI	GGCC	1 cut(s)	1267
BtgI	CCRYGG	1 cut(s)	1392
BtsCI	GGATG	9 cut(s)	220, 349, 717, 721, 1369, 1388, 1402, 1495, 1537
BtsI	GCAGTG	1 cut(s)	1421
BtsIMutI	CAGTG	1 cut(s)	1421
BveI	ACCTGC	1 cut(s)	1447
Cac8I	GCNNGC	1 cut(s)	161
CaiI	CAGNNNCTG	3 cut(s)	572, 773, 1475
CciI	TCATGA	3 cut(s)	684, 1201, 1273
CfoI	GCGC	1 cut(s)	1669
Cfr13I	GGNCC	2 cut(s)	21, 540
Csp6I	GTAC	4 cut(s)	173, 906, 1122, 1285
CviQI	GTAC	4 cut(s)	173, 906, 1122, 1285
DdeI	CTNAG	7 cut(s)	75, 321, 462, 755, 1479, 1586, 1770
DpnI	GATC	8 cut(s)	59, 351, 468, 669, 798, 998, 1150, 1465
DpnII	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
Eam1104I	CTCTTC	2 cut(s)	453, 1602
EarI	CTCTTC	2 cut(s)	453, 1602
Ecl136II	GAGCTC	1 cut(s)	1749
Eco130I	CCWWGG	4 cut(s)	626, 1152, 1219, 1392
Eco24I	GRGCYC	2 cut(s)	1751, 1778
Eco31I	GGTCTC	1 cut(s)	1014
Eco32I	GATATC	1 cut(s)	1300
Eco47I	GGWCC	2 cut(s)	21, 540
Eco53kI	GAGCTC	1 cut(s)	1749
Eco57I	CTGAAG	4 cut(s)	491, 993, 1328, 1452
Eco88I	CYCGRG	1 cut(s)	1253
EcoICRI	GAGCTC	1 cut(s)	1749
EcoRII	CCWGG	2 cut(s)	223, 1792
EcoRV	GATATC	1 cut(s)	1300
EcoT14I	CCWWGG	4 cut(s)	626, 1152, 1219, 1392
EcoT22I	ATGCAT	2 cut(s)	491, 805
EcoT38I	GRGCYC	2 cut(s)	1751, 1778
ErhI	CCWWGG	4 cut(s)	626, 1152, 1219, 1392
FalI	AAGNNNNNCTT	2 cut(s)	369, 401
FaqI	GGGAC	1 cut(s)	1468
FbaI	TGATCA	2 cut(s)	57, 796
FblI	GTMKAC	2 cut(s)	519, 1168
Fnu4HI	GCNGC	6 cut(s)	306, 318, 1401, 1415, 1473, 1476
FokI	GGATG	9 cut(s)	227, 356, 724, 728, 1375, 1376, 1409, 1482, 1544
FriOI	GRGCYC	2 cut(s)	1751, 1778
Fsp4HI	GCNGC	6 cut(s)	306, 318, 1401, 1415, 1473, 1476
FspBI	CTAG	6 cut(s)	170, 659, 1320, 1574, 1683, 1843
FspI	TGCGCA	1 cut(s)	1668
GlaI	GCGC	1 cut(s)	1668
GluI	GCNGC	6 cut(s)	306, 318, 1401, 1415, 1473, 1476
GsuI	CTGGAG	1 cut(s)	350
HaeIII	GGCC	1 cut(s)	1267
HhaI	GCGC	1 cut(s)	1669
Hin6I	GCGC	1 cut(s)	1667
HinP1I	GCGC	1 cut(s)	1667
HincII	GTYRAC	2 cut(s)	520, 949
HindII	GTYRAC	2 cut(s)	520, 949
HinfI	GANTC	7 cut(s)	83, 494, 770, 926, 1057, 1588, 1799
HpaI	GTTAAC	1 cut(s)	949
HphI	GGTGA	3 cut(s)	998, 1471, 1808
Hpy166II	GTNNAC	3 cut(s)	520, 949, 1169
Hpy188III	TCNNGA	8 cut(s)	329, 605, 685, 1202, 1253, 1274, 1369, 1818
Hpy8I	GTNNAC	3 cut(s)	520, 949, 1169
Hpy99I	CGWCG	1 cut(s)	203
HpyAV	CCTTC	6 cut(s)	134, 584, 702, 1303, 1591, 1717
HpyCH4III	ACNGT	1 cut(s)	277
HpyF10VI	GCNNNNNNNGC	6 cut(s)	41, 314, 1196, 1423, 1653, 1675
HpyF3I	CTNAG	7 cut(s)	75, 321, 462, 755, 1479, 1586, 1770
HspAI	GCGC	1 cut(s)	1667
Ksp22I	TGATCA	2 cut(s)	57, 796
KspAI	GTTAAC	1 cut(s)	949
Kzo9I	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
LmnI	GCTCC	2 cut(s)	917, 1312
Lsp1109I	GCAGC	6 cut(s)	292, 304, 1387, 1426, 1459, 1462
LweI	GCATC	6 cut(s)	22, 476, 769, 1387, 1397, 1495
MaeI	CTAG	6 cut(s)	170, 659, 1320, 1574, 1683, 1843
MaeIII	GTNAC	7 cut(s)	67, 277, 356, 966, 1082, 1239, 1541
MalI	GATC	8 cut(s)	59, 351, 468, 669, 798, 998, 1150, 1465
MboI	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
MfeI	CAATTG	1 cut(s)	1244
MflI	RGATCY	3 cut(s)	466, 1148, 1463
MhlI	GDGCHC	3 cut(s)	1317, 1751, 1778
MlyI	GAGTC	2 cut(s)	935, 1597
MmeI	TCCRAC	3 cut(s)	60, 460, 895
Mph1103I	ATGCAT	2 cut(s)	491, 805
MroXI	GAANNNNTTC	2 cut(s)	621, 1041
MseI	TTAA	7 cut(s)	387, 563, 597, 948, 1215, 1358, 1488
MslI	CAYNNNNRTG	1 cut(s)	757
MspA1I	CMGCKG	3 cut(s)	537, 1472, 1585
MspR9I	CCNGG	2 cut(s)	225, 1794
MunI	CAATTG	1 cut(s)	1244
MvaI	CCWGG	2 cut(s)	225, 1794
MwoI	GCNNNNNNNGC	6 cut(s)	41, 314, 1196, 1423, 1653, 1675
NcoI	CCATGG	1 cut(s)	1392
NdeII	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
NlaIV	GGNNCC	3 cut(s)	22, 721, 1150
NmuCI	GTSAC	2 cut(s)	1239, 1541
NsbI	TGCGCA	1 cut(s)	1668
NsiI	ATGCAT	2 cut(s)	491, 805
PagI	TCATGA	3 cut(s)	684, 1201, 1273
PaqCI	CACCTGC	1 cut(s)	1447
PdmI	GAANNNNTTC	2 cut(s)	621, 1041
PfeI	GAWTC	5 cut(s)	83, 494, 770, 1057, 1799
PkrI	GCNGC	6 cut(s)	307, 319, 1402, 1416, 1474, 1477
PleI	GAGTC	2 cut(s)	934, 1596
PpsI	GAGTC	2 cut(s)	934, 1596
PshBI	ATTAAT	2 cut(s)	597, 1358
Psp124BI	GAGCTC	1 cut(s)	1751
Psp6I	CCWGG	2 cut(s)	223, 1792
PspGI	CCWGG	2 cut(s)	223, 1792
PspN4I	GGNNCC	3 cut(s)	22, 721, 1150
PspPI	GGNCC	2 cut(s)	21, 540
PstNI	CAGNNNCTG	3 cut(s)	572, 773, 1475
PsuI	RGATCY	3 cut(s)	466, 1148, 1463
PvuII	CAGCTG	3 cut(s)	537, 1472, 1585
RsaI	GTAC	4 cut(s)	174, 907, 1123, 1286
RsaNI	GTAC	4 cut(s)	173, 906, 1122, 1285
RseI	CAYNNNNRTG	1 cut(s)	757
SacI	GAGCTC	1 cut(s)	1751
SalI	GTCGAC	1 cut(s)	518
SaqAI	TTAA	7 cut(s)	387, 563, 597, 948, 1215, 1358, 1488
SatI	GCNGC	6 cut(s)	306, 318, 1401, 1415, 1473, 1476
Sau3AI	GATC	8 cut(s)	57, 349, 466, 667, 796, 996, 1148, 1463
Sau96I	GGNCC	2 cut(s)	21, 540
ScaI	AGTACT	1 cut(s)	907
SchI	GAGTC	2 cut(s)	935, 1597
ScrFI	CCNGG	2 cut(s)	225, 1794
SduI	GDGCHC	3 cut(s)	1317, 1751, 1778
SfaNI	GCATC	6 cut(s)	22, 476, 769, 1387, 1397, 1495
SfcI	CTRYAG	2 cut(s)	673, 1785
SinI	GGWCC	2 cut(s)	21, 540
SmiMI	CAYNNNNRTG	1 cut(s)	757
SpeI	ACTAGT	1 cut(s)	169
SspI	AATATT	1 cut(s)	622
SspMI	CTAG	6 cut(s)	170, 659, 1320, 1574, 1683, 1843
SstI	GAGCTC	1 cut(s)	1751
StyD4I	CCNGG	2 cut(s)	223, 1792
StyI	CCWWGG	4 cut(s)	626, 1152, 1219, 1392
TaaI	ACNGT	1 cut(s)	277
TaqI	TCGA	4 cut(s)	201, 519, 604, 1262
TaqII	GACCGA	2 cut(s)	353, 996
TatI	WGTACW	2 cut(s)	905, 1284
TfiI	GAWTC	5 cut(s)	83, 494, 770, 1057, 1799
Tru1I	TTAA	7 cut(s)	387, 563, 597, 948, 1215, 1358, 1488
Tru9I	TTAA	7 cut(s)	387, 563, 597, 948, 1215, 1358, 1488
TscAI	CASTG	1 cut(s)	1428
TseFI	GTSAC	2 cut(s)	1239, 1541
TseI	GCWGC	6 cut(s)	305, 317, 1400, 1414, 1472, 1475
Tsp45I	GTSAC	2 cut(s)	1239, 1541
TspGWI	ACGGA	1 cut(s)	1798
TspRI	CASTG	1 cut(s)	1428
VpaK11BI	GGWCC	2 cut(s)	21, 540
VspI	ATTAAT	2 cut(s)	597, 1358
XapI	RAATTY	3 cut(s)	235, 257, 1525
XcmI	CCANNNNNNNNNTGG	2 cut(s)	633, 1525
XmiI	GTMKAC	2 cut(s)	519, 1168
XmnI	GAANNNNTTC	2 cut(s)	621, 1041
XspI	CTAG	6 cut(s)	170, 659, 1320, 1574, 1683, 1843
ZrmI	AGTACT	1 cut(s)	907
Zsp2I	ATGCAT	2 cut(s)	491, 805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.