Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0007597

Physical Location & Seq

Genomic Coordinates Forward (+)

63416582 .. 63420612

Gene Structure 4031 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG408200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGAAGTTTATGAAGTTAGGGTCCAAGCCTGATGCGTTTCAAGCTGATGGCAAGTTGATCAGATATGTAACATCTGAGTTGGATTCAGATGTCATCGTAAAGGTTGGGGAAGTGCAATTTTACCTTCACAAGTTCCCTCTCCTTTCCAAGAGTAATCGCTTGCAAAAACTAGTACCTAAAGCCAATGAGGAGAAAGTCGTCGAAGTTTGCATGGATGATTTCCCTGGTGGGGCAAATTCCTTTGAAGTCTGTGCAAAATTTTGCTATGGAATGACTGTTACTCTCAATGCTTACAATGTTGTGGCTGCTCGTTGTGCCGCTGAGTATCTGGAGATGACTGAGGATGTTGATCGCAGTAACCTGATATATAAAATTGAAGTATTCCTGAATTCAAGTATATTTCGTAGCTGGAAAGATACCATTATTGTTCTCCAAACCACCAAACCTCTTCTGTCATGGTCCGAGGATCTGAAGATTGTCGGAAGATGCATAGATTCAATCGCTTCTAAAACTTCTGTCGACCCTGCAAATATCAGCTGGTCCTACACATACAACCGAAAATTAACAGAGCCTGATAAAATTATTGAAGGGATTAATTATCGAGACAAAATGGAAAATATTCCAAGGGATTGGTGGGTTGAAGATATATGTGAGCTAGATATTGATCTCTACAGGCGTGTCATGATTGCTGTGAAATCAAAAGGAAGAATGGATGGTGCCATTATTGGGGAGGCTCTGAAAACTTATGCACTTAGATGGTTGCCAGATTCTGTTGATGCGTTGATTTCTGATGATCATGCATTGAGAAACAAATCTCTGGTAGAAACTATTATTTGTTTATTGCCATCTGACAAAGGTGTGGGTTGTTCATGCAGTTTCTTACTGAAACTTTTGAAAGTTAGTACTTTGGTTGGAGCAGATGAGTCATTGAGGGAGGTTCTGGTTAACAGGATTGGTTTGAAGTTACCTGAAGCTCGTGTTGGTGATTTATTGATCCCTGCTCGGTCTCCTCAAATTACTATTTATGATGTTGAATTGGTTCAGTCCATTGTGAATCGGTTTGTGATACATGAAAAGAGTAACTGGGATTTAGATGTTGTTCGGAAGAATGGAAGGGGTACTGATAATTTTATCTTGGGGCATGGATCCTTGGTGGGTGTTGGTAGACTGATTGATGGGTATCTTGCCGAAATTGCTCATGACCCTAATCTTAACCTTGGTAGTTTCATAGACTTGTCACAATTGCTTCCTGAGTTAGCGAGGCCAATTCATGATGGATTGTACAAAGCCATTGATATCTACCTGAAGGAGCACCCTAGTCTGACAAAGGCTGAAAGGAAAAGAATATGTGGATTAATGGATGTCAAGAAACTGACAATGGAGGCATCCATGGATGCTGCACAGAACGAGCAGCTTCCACTGCGAGTTGTTGTCCAAGTTCTCTTTTTTGAGCAGGTGAGATCTTCAGCTGCTGCTCGGTCCCTTAACAACCATCCATCCGATGCTTCACATTCCACCACAAATTTGGATGAAGAATGTGACAAGACAGCAGAAGAAAACTGCAAACCTTTAGGAAAACAGCTGAGTCAAATGAAGGTAAGCGAAGAGTTGCAGAAGAATGGGAAATTGGGTAAGAAGAACAGCAAGAATAGTAGAAGTGGTGCACAGTTGTTGCCGTCTAGGTCAAGGAGGATATTTGACAAGTTATGGTCTGTGGGGAAGGGGGGGCATGGAGAGAACAAGAGCTCGGAGACTTCTGGGAGTTCTCAGAGCCCAACTTCTATAGTTCCTGGTGATTCCAAGTCTGTTTCATCAAGACACAGGAGGCATTCTATATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005886 GO:0006810 GO:0007275 GO:0008104 GO:0008150 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0009909 GO:0009911 GO:0009914 GO:0009926 GO:0010154 GO:0010229 GO:0010540 GO:0010817 GO:0012505 GO:0016020 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0033036 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0045176 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051094 GO:0051179 GO:0051234 GO:0051239 GO:0051240 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071944 GO:0090567 GO:0097708 GO:0099402 GO:2000026 GO:2000241 GO:2000243

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BTB NPH3

Protein Analysis

613

Amino Acids

68.45

Weight (kDa)

8.11

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NPH3	PF03000	210 - 463	2.8e-83	NPH3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007597)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31820 AT4G31820
fragaria_vesca	FvH4_2g41130 FvH4_2g41130 FvH4_2g41130 FvH4_2g41130
malus_domestica	MD08G1057100.v1.1 MD15G1040500.v1.1 MD15G1040600.v1.1
prunus_persica	Prupe.1G393800_v2.0.a1
pyrus_communis	pycom08g04650 pycom08g04660 pycom15g03780
rosa_chinensis	RchiOBHm_Chr5g0077711 RchiOBHm_Chr6g0299411
rosa_laevigata	RLG00000011434
rosa_multiflora	Rmu_co8314217.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168710
rosa_rugosa	Rorug06G0288000
rosa_samantha	Rh6AG399800 Rh6BG408200 Rh6CG413900 Rh6DG400900
rosa_wichuraiana	Rw6G034990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1444
Acc36I	ACCTGC	1 cut(s)	1444
AccB1I	GGYRCC	1 cut(s)	716
AccI	GTMKAC	2 cut(s)	519, 1165
AciI	CCGC	1 cut(s)	318
AclWI	GGATC	4 cut(s)	474, 988, 1140, 1153
AcsI	RAATTY	4 cut(s)	235, 257, 388, 1522
AcuI	CTGAAG	4 cut(s)	491, 990, 1325, 1449
AfaI	GTAC	4 cut(s)	174, 904, 1120, 1283
AfiI	CCNNNNNNNGG	2 cut(s)	229, 726
AhlI	ACTAGT	1 cut(s)	169
AjnI	CCWGG	2 cut(s)	223, 1789
AjuI	GAANNNNNNNTTGG	4 cut(s)	963, 995, 1610, 1642
AluBI	AGCT	9 cut(s)	44, 408, 537, 655, 974, 1414, 1469, 1582, 1746
AluI	AGCT	9 cut(s)	44, 408, 537, 655, 974, 1414, 1469, 1582, 1746
Alw21I	GWGCWC	3 cut(s)	1314, 1666, 1748
Alw26I	GTCTC	3 cut(s)	597, 1011, 1745
Alw44I	GTGCAC	1 cut(s)	1662
AlwI	GGATC	4 cut(s)	474, 988, 1140, 1153
AlwNI	CAGNNNCTG	3 cut(s)	572, 770, 1472
AoxI	GGCC	1 cut(s)	1262
ApaLI	GTGCAC	1 cut(s)	1662
ApeKI	GCWGC	5 cut(s)	305, 1397, 1411, 1469, 1472
ApoI	RAATTY	4 cut(s)	235, 257, 388, 1522
AseI	ATTAAT	2 cut(s)	594, 1355
Asp700I	GAANNNNTTC	2 cut(s)	618, 1038
AspS9I	GGNCC	4 cut(s)	21, 459, 540, 1479
AsuHPI	GGTGA	3 cut(s)	995, 1468, 1805
AvaII	GGWCC	4 cut(s)	21, 459, 540, 1479
BaeGI	GKGCMC	1 cut(s)	1666
BamHI	GGATCC	1 cut(s)	1145
BanI	GGYRCC	1 cut(s)	716
BanII	GRGCYC	2 cut(s)	1748, 1775
BauI	CACGAG	1 cut(s)	975
Bbv12I	GWGCWC	3 cut(s)	1314, 1666, 1748
BbvI	GCAGC	5 cut(s)	292, 1384, 1423, 1456, 1459
BccI	CCATC	8 cut(s)	41, 707, 750, 853, 1169, 1268, 1500, 1504
BceAI	ACGGC	1 cut(s)	1660
BciT130I	CCWGG	2 cut(s)	225, 1791
BclI	TGATCA	2 cut(s)	57, 793
BcoDI	GTCTC	3 cut(s)	597, 1011, 1745
BcuI	ACTAGT	1 cut(s)	169
BfaI	CTAG	5 cut(s)	170, 656, 1317, 1680, 1840
BfmI	CTRYAG	2 cut(s)	670, 1782
BfuAI	ACCTGC	1 cut(s)	1444
BglII	AGATCT	1 cut(s)	1460
BisI	GCNGC	6 cut(s)	306, 318, 1398, 1412, 1470, 1473
BlsI	GCNGC	6 cut(s)	307, 319, 1399, 1413, 1471, 1474
BmcAI	AGTACT	1 cut(s)	904
Bme1390I	CCNGG	2 cut(s)	225, 1791
Bme18I	GGWCC	4 cut(s)	21, 459, 540, 1479
BmgT120I	GGNCC	4 cut(s)	21, 459, 540, 1479
BmiI	GGNNCC	4 cut(s)	22, 718, 1147, 1481
BmrFI	CCNGG	2 cut(s)	225, 1791
BmrI	ACTGGG	1 cut(s)	1093
BmsI	GCATC	6 cut(s)	22, 476, 766, 1384, 1394, 1492
BmuI	ACTGGG	1 cut(s)	1093
BpmI	CTGGAG	1 cut(s)	350
BsaBI	GATNNNNATC	3 cut(s)	348, 663, 1179
BsaI	GGTCTC	1 cut(s)	1011
BsaJI	CCNNGG	6 cut(s)	223, 462, 623, 1149, 1216, 1389
Bsc4I	CCNNNNNNNGG	2 cut(s)	229, 726
Bse1I	ACTGG	1 cut(s)	1088
Bse8I	GATNNNNATC	3 cut(s)	348, 663, 1179
BseBI	CCWGG	2 cut(s)	225, 1791
BseDI	CCNNGG	6 cut(s)	223, 462, 623, 1149, 1216, 1389
BseGI	GGATG	9 cut(s)	220, 349, 718, 1366, 1385, 1399, 1492, 1496, 1534
BseJI	GATNNNNATC	3 cut(s)	348, 663, 1179
BseLI	CCNNNNNNNGG	2 cut(s)	229, 726
BseMII	CTCAG	6 cut(s)	66, 312, 330, 1242, 1574, 1781
BseNI	ACTGG	1 cut(s)	1088
BseRI	GAGGAG	2 cut(s)	203, 999
BseSI	GKGCMC	1 cut(s)	1666
BseXI	GCAGC	5 cut(s)	292, 1384, 1423, 1456, 1459
BsgI	GTGCAG	1 cut(s)	1383
BshFI	GGCC	1 cut(s)	1264
BshNI	GGYRCC	1 cut(s)	716
BsiHKAI	GWGCWC	3 cut(s)	1314, 1666, 1748
BslFI	GGGAC	1 cut(s)	1465
BslI	CCNNNNNNNGG	2 cut(s)	229, 726
BsmAI	GTCTC	3 cut(s)	597, 1011, 1745
BsmFI	GGGAC	1 cut(s)	1465
BsmI	GAATGC	1 cut(s)	1828
BsnI	GGCC	1 cut(s)	1264
Bso31I	GGTCTC	1 cut(s)	1011
Bsp1286I	GDGCHC	4 cut(s)	1314, 1666, 1748, 1775
Bsp1407I	TGTACA	1 cut(s)	1281
Bsp143I	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
Bsp19I	CCATGG	1 cut(s)	1389
BspACI	CCGC	1 cut(s)	318
BspANI	GGCC	1 cut(s)	1264
BspCNI	CTCAG	6 cut(s)	67, 313, 331, 1243, 1575, 1780
BspHI	TCATGA	3 cut(s)	681, 1198, 1270
BspLI	GGNNCC	4 cut(s)	22, 718, 1147, 1481
BspMI	ACCTGC	1 cut(s)	1444
BspPI	GGATC	4 cut(s)	474, 988, 1140, 1153
BspT107I	GGYRCC	1 cut(s)	716
BspTNI	GGTCTC	1 cut(s)	1011
BsrGI	TGTACA	1 cut(s)	1281
BsrI	ACTGG	1 cut(s)	1088
BssECI	CCNNGG	6 cut(s)	223, 462, 623, 1149, 1216, 1389
BssMI	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
BssSI	CACGAG	1 cut(s)	975
BssT1I	CCWWGG	4 cut(s)	623, 1149, 1216, 1389
Bst2BI	CACGAG	1 cut(s)	975
Bst2UI	CCWGG	2 cut(s)	225, 1791
Bst4CI	ACNGT	2 cut(s)	277, 1668
Bst6I	CTCTTC	2 cut(s)	453, 1599
BstAUI	TGTACA	1 cut(s)	1281
BstC8I	GCNNGC	1 cut(s)	161
BstDEI	CTNAG	7 cut(s)	75, 321, 339, 752, 1251, 1583, 1767
BstDSI	CCRYGG	1 cut(s)	1389
BstF5I	GGATG	9 cut(s)	220, 349, 718, 1366, 1385, 1399, 1492, 1496, 1534
BstKTI	GATC	8 cut(s)	60, 352, 469, 667, 796, 996, 1148, 1463
BstMAI	GTCTC	3 cut(s)	597, 1011, 1745
BstMBI	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
BstMWI	GCNNNNNNNGC	4 cut(s)	41, 314, 1193, 1420
BstNI	CCWGG	2 cut(s)	225, 1791
BstSCI	CCNGG	2 cut(s)	223, 1789
BstSFI	CTRYAG	2 cut(s)	670, 1782
BstSLI	GKGCMC	1 cut(s)	1666
BstV1I	GCAGC	5 cut(s)	292, 1384, 1423, 1456, 1459
BstX2I	RGATCY	3 cut(s)	466, 1145, 1460
BstXI	CCANNNNNNTGG	2 cut(s)	630, 1525
BstYI	RGATCY	3 cut(s)	466, 1145, 1460
BsuRI	GGCC	1 cut(s)	1264
BtgI	CCRYGG	1 cut(s)	1389
BtsCI	GGATG	9 cut(s)	220, 349, 718, 1366, 1385, 1399, 1492, 1496, 1534
BtsI	GCAGTG	1 cut(s)	1418
BtsIMutI	CAGTG	1 cut(s)	1418
BveI	ACCTGC	1 cut(s)	1444
Cac8I	GCNNGC	1 cut(s)	161
CaiI	CAGNNNCTG	3 cut(s)	572, 770, 1472
CciI	TCATGA	3 cut(s)	681, 1198, 1270
Cfr13I	GGNCC	4 cut(s)	21, 459, 540, 1479
Csp6I	GTAC	4 cut(s)	173, 903, 1119, 1282
CviQI	GTAC	4 cut(s)	173, 903, 1119, 1282
DdeI	CTNAG	7 cut(s)	75, 321, 339, 752, 1251, 1583, 1767
DpnI	GATC	8 cut(s)	59, 351, 468, 666, 795, 995, 1147, 1462
DpnII	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
Eam1104I	CTCTTC	2 cut(s)	453, 1599
EarI	CTCTTC	2 cut(s)	453, 1599
Ecl136II	GAGCTC	1 cut(s)	1746
Eco130I	CCWWGG	4 cut(s)	623, 1149, 1216, 1389
Eco24I	GRGCYC	2 cut(s)	1748, 1775
Eco31I	GGTCTC	1 cut(s)	1011
Eco32I	GATATC	1 cut(s)	1297
Eco47I	GGWCC	4 cut(s)	21, 459, 540, 1479
Eco53kI	GAGCTC	1 cut(s)	1746
Eco57I	CTGAAG	4 cut(s)	491, 990, 1325, 1449
EcoICRI	GAGCTC	1 cut(s)	1746
EcoRI	GAATTC	1 cut(s)	388
EcoRII	CCWGG	2 cut(s)	223, 1789
EcoRV	GATATC	1 cut(s)	1297
EcoT14I	CCWWGG	4 cut(s)	623, 1149, 1216, 1389
EcoT22I	ATGCAT	2 cut(s)	491, 802
EcoT38I	GRGCYC	2 cut(s)	1748, 1775
ErhI	CCWWGG	4 cut(s)	623, 1149, 1216, 1389
FaqI	GGGAC	1 cut(s)	1465
FbaI	TGATCA	2 cut(s)	57, 793
FblI	GTMKAC	2 cut(s)	519, 1165
Fnu4HI	GCNGC	6 cut(s)	306, 318, 1398, 1412, 1470, 1473
FokI	GGATG	9 cut(s)	227, 356, 725, 1372, 1373, 1406, 1479, 1483, 1541
FriOI	GRGCYC	2 cut(s)	1748, 1775
Fsp4HI	GCNGC	6 cut(s)	306, 318, 1398, 1412, 1470, 1473
FspBI	CTAG	5 cut(s)	170, 656, 1317, 1680, 1840
GluI	GCNGC	6 cut(s)	306, 318, 1398, 1412, 1470, 1473
GsuI	CTGGAG	1 cut(s)	350
HaeIII	GGCC	1 cut(s)	1264
HincII	GTYRAC	2 cut(s)	520, 946
HindII	GTYRAC	2 cut(s)	520, 946
HinfI	GANTC	7 cut(s)	83, 494, 767, 923, 1054, 1585, 1796
HpaI	GTTAAC	1 cut(s)	946
HphI	GGTGA	3 cut(s)	995, 1468, 1805
Hpy166II	GTNNAC	4 cut(s)	520, 946, 1166, 1664
Hpy188III	TCNNGA	9 cut(s)	329, 385, 602, 682, 1199, 1250, 1271, 1366, 1815
Hpy8I	GTNNAC	4 cut(s)	520, 946, 1166, 1664
Hpy99I	CGWCG	1 cut(s)	203
HpyAV	CCTTC	6 cut(s)	134, 581, 1107, 1300, 1588, 1714
HpyCH4III	ACNGT	2 cut(s)	277, 1668
HpyF10VI	GCNNNNNNNGC	4 cut(s)	41, 314, 1193, 1420
HpyF3I	CTNAG	7 cut(s)	75, 321, 339, 752, 1251, 1583, 1767
Ksp22I	TGATCA	2 cut(s)	57, 793
KspAI	GTTAAC	1 cut(s)	946
Kzo9I	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
LmnI	GCTCC	2 cut(s)	914, 1309
Lsp1109I	GCAGC	5 cut(s)	292, 1384, 1423, 1456, 1459
LweI	GCATC	6 cut(s)	22, 476, 766, 1384, 1394, 1492
MaeI	CTAG	5 cut(s)	170, 656, 1317, 1680, 1840
MaeIII	GTNAC	7 cut(s)	67, 277, 356, 963, 1079, 1236, 1538
MalI	GATC	8 cut(s)	59, 351, 468, 666, 795, 995, 1147, 1462
MboI	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
MfeI	CAATTG	1 cut(s)	1241
MflI	RGATCY	3 cut(s)	466, 1145, 1460
MhlI	GDGCHC	4 cut(s)	1314, 1666, 1748, 1775
MlyI	GAGTC	2 cut(s)	932, 1594
MmeI	TCCRAC	3 cut(s)	60, 460, 892
Mph1103I	ATGCAT	2 cut(s)	491, 802
MroXI	GAANNNNTTC	2 cut(s)	618, 1038
MseI	TTAA	6 cut(s)	563, 594, 945, 1212, 1355, 1485
MslI	CAYNNNNRTG	1 cut(s)	754
MspA1I	CMGCKG	4 cut(s)	320, 537, 1469, 1582
MspR9I	CCNGG	2 cut(s)	225, 1791
MunI	CAATTG	1 cut(s)	1241
Mva1269I	GAATGC	1 cut(s)	1828
MvaI	CCWGG	2 cut(s)	225, 1791
MwoI	GCNNNNNNNGC	4 cut(s)	41, 314, 1193, 1420
NcoI	CCATGG	1 cut(s)	1389
NdeII	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
NlaIV	GGNNCC	4 cut(s)	22, 718, 1147, 1481
NmuCI	GTSAC	2 cut(s)	1236, 1538
NsiI	ATGCAT	2 cut(s)	491, 802
PagI	TCATGA	3 cut(s)	681, 1198, 1270
PaqCI	CACCTGC	1 cut(s)	1444
PctI	GAATGC	1 cut(s)	1828
PdmI	GAANNNNTTC	2 cut(s)	618, 1038
PfeI	GAWTC	5 cut(s)	83, 494, 767, 1054, 1796
PkrI	GCNGC	6 cut(s)	307, 319, 1399, 1413, 1471, 1474
PleI	GAGTC	2 cut(s)	931, 1593
PpsI	GAGTC	2 cut(s)	931, 1593
PshBI	ATTAAT	2 cut(s)	594, 1355
Psp124BI	GAGCTC	1 cut(s)	1748
Psp6I	CCWGG	2 cut(s)	223, 1789
PspGI	CCWGG	2 cut(s)	223, 1789
PspN4I	GGNNCC	4 cut(s)	22, 718, 1147, 1481
PspPI	GGNCC	4 cut(s)	21, 459, 540, 1479
PstNI	CAGNNNCTG	3 cut(s)	572, 770, 1472
PsuI	RGATCY	3 cut(s)	466, 1145, 1460
PvuII	CAGCTG	3 cut(s)	537, 1469, 1582
RsaI	GTAC	4 cut(s)	174, 904, 1120, 1283
RsaNI	GTAC	4 cut(s)	173, 903, 1119, 1282
RseI	CAYNNNNRTG	1 cut(s)	754
SacI	GAGCTC	1 cut(s)	1748
SalI	GTCGAC	1 cut(s)	518
SaqAI	TTAA	6 cut(s)	563, 594, 945, 1212, 1355, 1485
SatI	GCNGC	6 cut(s)	306, 318, 1398, 1412, 1470, 1473
Sau3AI	GATC	8 cut(s)	57, 349, 466, 664, 793, 993, 1145, 1460
Sau96I	GGNCC	4 cut(s)	21, 459, 540, 1479
ScaI	AGTACT	1 cut(s)	904
SchI	GAGTC	2 cut(s)	932, 1594
ScrFI	CCNGG	2 cut(s)	225, 1791
SduI	GDGCHC	4 cut(s)	1314, 1666, 1748, 1775
SfaNI	GCATC	6 cut(s)	22, 476, 766, 1384, 1394, 1492
SfcI	CTRYAG	2 cut(s)	670, 1782
SinI	GGWCC	4 cut(s)	21, 459, 540, 1479
SmiMI	CAYNNNNRTG	1 cut(s)	754
SpeI	ACTAGT	1 cut(s)	169
SsiI	CCGC	1 cut(s)	318
SspI	AATATT	1 cut(s)	619
SspMI	CTAG	5 cut(s)	170, 656, 1317, 1680, 1840
SstI	GAGCTC	1 cut(s)	1748
StyD4I	CCNGG	2 cut(s)	223, 1789
StyI	CCWWGG	4 cut(s)	623, 1149, 1216, 1389
TaaI	ACNGT	2 cut(s)	277, 1668
TaqI	TCGA	3 cut(s)	201, 519, 601
TaqII	GACCGA	2 cut(s)	993, 1467
TatI	WGTACW	2 cut(s)	902, 1281
TauI	GCSGC	1 cut(s)	320
TfiI	GAWTC	5 cut(s)	83, 494, 767, 1054, 1796
Tru1I	TTAA	6 cut(s)	563, 594, 945, 1212, 1355, 1485
Tru9I	TTAA	6 cut(s)	563, 594, 945, 1212, 1355, 1485
TscAI	CASTG	1 cut(s)	1425
TseFI	GTSAC	2 cut(s)	1236, 1538
TseI	GCWGC	5 cut(s)	305, 1397, 1411, 1469, 1472
Tsp45I	GTSAC	2 cut(s)	1236, 1538
TspDTI	ATGAA	9 cut(s)	17, 26, 858, 1086, 1216, 1259, 1545, 1607, 1800
TspRI	CASTG	1 cut(s)	1425
VneI	GTGCAC	1 cut(s)	1662
VpaK11BI	GGWCC	4 cut(s)	21, 459, 540, 1479
VspI	ATTAAT	2 cut(s)	594, 1355
XapI	RAATTY	4 cut(s)	235, 257, 388, 1522
XcmI	CCANNNNNNNNNTGG	2 cut(s)	630, 1522
XmiI	GTMKAC	2 cut(s)	519, 1165
XmnI	GAANNNNTTC	2 cut(s)	618, 1038
XspI	CTAG	5 cut(s)	170, 656, 1317, 1680, 1840
ZrmI	AGTACT	1 cut(s)	904
Zsp2I	ATGCAT	2 cut(s)	491, 802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.