Prupe.1G408100_v2.0.a1

phosphatase 2C

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
35752324 .. 35756270
3947 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G408100.8

Sequence Viewer

Length: 1680 bp
ATGGAGGAGATGTCTCCGGCGGTCACGGTGCCATTTAGAGTAGGTAACTCAGTCTGTGATAACCCAAACATAGCTACCCACATGGATGTCACAAGACTTAAGCTAATGACAGACACGGCGGGTTTGCTATCTGATTCTGTCACCAGGGGTTCCAGTGAGACGGTTGCAGCTGGTGAAGAGGATTGTAATTGTAGTTATTTGGAGAATGAAGTTAGTTTTGTAGAAGTTTCAGTGCCAAAAGAGGACGAGGAAGGAGAAGCTCCTTTGTTGGATATGATATCTCAAGACGGAAGCAATTGGGTTTCTGCTGCTGATGAGATAGCTCGGGAAAGTGAGGAAGATGATTCCTTATCATTGGAAGGCGATCAGATTCTTGATAGCTCTTGTTCACTCTCTGTGGCTAGTGAGTCAAGTAGCTTATGTTTAGAAGACTTCCTCGTTTATGAGGCTAGTCCTGACATAGGGACATTGACTTCTGTAGACGTTGAGAAGGGCATTTGCTGTGTTGATGTTGCAAGGGCTTCAGATTTGGGTGATTCAAAAGTTGAGACAGAGATCACAACCGAACCCCTTGCTATGACGGTGAGCCTCGAGAAAGAAAATCGTGATGGGTCTGACCAAAAGCCATCTGAAGTTGTTCAATTGCCTGTGGAAACAGTGGTCAAAGAAACAGTAAGCCGCAGTGTTTTTGAGGTAGACTATGTGCCACTTTGGGGGTTTACGTCCATGATTGGAAGAAGACCAGAGATGGAAGACGCACTTGCCACTGTACCTCAACTTTTAAAAATTCCAATTCAAATGCTGATTGGCGACCGGGTACTTGATGGCATGAGCAAGTGTTTAAACCAGACTGTTCATTTCTTTGGAGTCTATGATGGTCATGGAGGCTCTCAGGTTGCAAACTATTGTCGTGATCGTGCACATTTGGCTTTGGTTGAAGAGATAGAGTCCGTTAAGGAAGGCCTTATTCATGAAAGTGTCAAAGATAATTGCCAAGAGCAATGGAGAAAAGCATTTACCAATTGTTTTCATAAGGTTGATGCTGAAGTTGGAGGGAAGGCTAGTCTTGAGCCTGTTGCCCCGGAAACTGTTGGTTCCACTGCTGTTGTTGCCCTTATTTGTTCGTCTCATATAATAGTAGCAAACTGTGGAGATTCAAGAGCAGTTCTGTGTCGTGGTAAAGAACCCATGGCATTATCAGTGGATCATAAACCAAATCGGGAAGATGAATATGCAAGGATTGAGGCAGCTGGGGGCAAGGTCATACAATGGAATGGGCATCGTGTTTTTGGTGTTCTTGCTATGTCGAGGTCTATAGGCACAAACTTATTTTCTAACGAAGGCGATAGATATTTAAAACCGTGGATCATTCCAGAACCAGAAGTGATGTTTATTCCTCGAACAAAAGATGACGAATGCCTCATTTTAGCCAGTGATGGTTTATGGGATGTTATGTCAAATGAAGAAGTGTGTGACCTTGCTCGGAGACGAATACTTCTCTGGCACAAGAAGAATGGCATTACTCCACTTACGCTGGAAAGAGGCGAAGGAATTGATCCCGCAGCTCAGGCAGCTGCGGAGTTGCTTTCGAACCGTGCTCTTCAAAAAGGAAGTAAGGACAACATTACTGTAATTGTGGTGGATTTGAAAGCTCAAAGGAAGTTTAAAAGCAAAACATGA

Protein Analysis

560

Amino Acids

61.1

Weight (kDa)

4.6

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 28
AccI GTMKAC 2 cut(s) 480, 696
AciI CCGC 5 cut(s) 20, 119, 679, 1560, 1577
AclWI GGATC 3 cut(s) 1212, 1373, 1550
AcsI RAATTY 1 cut(s) 786
AcuI CTGAAG 3 cut(s) 507, 651, 1065
AfaI GTAC 2 cut(s) 771, 819
AfiI CCNNNNNNNGG 2 cut(s) 461, 713
AflII CTTAAG 1 cut(s) 98
AgsI TTSAA 7 cut(s) 540, 641, 797, 938, 1158, 1604, 1648
AjnI CCWGG 1 cut(s) 143
Alw21I GWGCWC 2 cut(s) 922, 1600
Alw26I GTCTC 5 cut(s) 18, 152, 542, 1131, 1480
Alw44I GTGCAC 1 cut(s) 918
AlwI GGATC 3 cut(s) 1212, 1373, 1550
Ama87I CYCGRG 2 cut(s) 324, 590
AoxI GGCC 1 cut(s) 961
ApaLI GTGCAC 1 cut(s) 918
ApeKI GCWGC 6 cut(s) 167, 308, 1247, 1562, 1571, 1574
ApoI RAATTY 1 cut(s) 786
Asp700I GAANNNNTTC 1 cut(s) 636
AsuC2I CCSGG 2 cut(s) 815, 1082
AsuHPI GGTGA 4 cut(s) 133, 185, 545, 595
AsuII TTCGAA 1 cut(s) 1589
AvaI CYCGRG 2 cut(s) 324, 590
BaeGI GKGCMC 1 cut(s) 922
BanI GGYRCC 1 cut(s) 28
BbsI GAAGAC 3 cut(s) 435, 745, 759
Bbv12I GWGCWC 2 cut(s) 922, 1600
BbvI GCAGC 6 cut(s) 179, 295, 1259, 1561, 1574, 1583
BccI CCATC 6 cut(s) 602, 634, 742, 818, 869, 1430
BceAI ACGGC 1 cut(s) 132
BcgI CGANNNNNNTGC 2 cut(s) 554, 588
BciT130I CCWGG 1 cut(s) 145
BcnI CCSGG 2 cut(s) 815, 1082
BcoDI GTCTC 5 cut(s) 18, 152, 542, 1131, 1480
BfaI CTAG 3 cut(s) 402, 450, 1062
BfmI CTRYAG 2 cut(s) 477, 1314
BfrI CTTAAG 1 cut(s) 98
BisI GCNGC 7 cut(s) 168, 309, 679, 1248, 1563, 1572, 1575
BlsI GCNGC 7 cut(s) 169, 310, 680, 1249, 1564, 1573, 1576
Bme1390I CCNGG 3 cut(s) 145, 815, 1082
BmeT110I CYCGRG 2 cut(s) 324, 590
BmiI GGNNCC 3 cut(s) 30, 151, 1096
BmrFI CCNGG 3 cut(s) 145, 815, 1082
BmsI GCATC 2 cut(s) 1030, 1288
BpiI GAAGAC 3 cut(s) 435, 745, 759
Bpu10I CCTNAGC 1 cut(s) 1566
Bpu14I TTCGAA 1 cut(s) 1589
BpuEI CTTGAG 2 cut(s) 267, 1088
BpuMI CCSGG 2 cut(s) 815, 1082
BsaJI CCNNGG 4 cut(s) 144, 1080, 1188, 1361
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 2 cut(s) 461, 713
Bse1I ACTGG 2 cut(s) 153, 1431
Bse3DI GCAATG 1 cut(s) 1007
BseBI CCWGG 1 cut(s) 145
BseDI CCNNGG 4 cut(s) 144, 1080, 1188, 1361
BseGI GGATG 2 cut(s) 91, 1453
BseLI CCNNNNNNNGG 2 cut(s) 461, 713
BseMI GCAATG 1 cut(s) 1007
BseMII CTCAG 3 cut(s) 63, 905, 1580
BseNI ACTGG 2 cut(s) 153, 1431
BseRI GAGGAG 1 cut(s) 20
BseSI GKGCMC 1 cut(s) 922
BseXI GCAGC 6 cut(s) 179, 295, 1259, 1561, 1574, 1583
BseYI CCCAGC 1 cut(s) 1250
Bsh1285I CGRYCG 1 cut(s) 814
BshFI GGCC 1 cut(s) 963
BshNI GGYRCC 1 cut(s) 28
BsiEI CGRYCG 1 cut(s) 814
BsiHKAI GWGCWC 2 cut(s) 922, 1600
BsiHKCI CYCGRG 2 cut(s) 324, 590
BsiSI CCGG 3 cut(s) 17, 814, 1082
BslFI GGGAC 1 cut(s) 478
BslI CCNNNNNNNGG 2 cut(s) 461, 713
BsmAI GTCTC 5 cut(s) 18, 152, 542, 1131, 1480
BsmBI CGTCTC 3 cut(s) 152, 1131, 1480
BsmFI GGGAC 1 cut(s) 478
BsmI GAATGC 1 cut(s) 1421
BsnI GGCC 1 cut(s) 963
BsoBI CYCGRG 2 cut(s) 324, 590
Bsp119I TTCGAA 1 cut(s) 1589
Bsp1286I GDGCHC 2 cut(s) 922, 1600
Bsp143I GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
Bsp19I CCATGG 1 cut(s) 1188
BspACI CCGC 5 cut(s) 20, 119, 679, 1560, 1577
BspANI GGCC 1 cut(s) 963
BspCNI CTCAG 3 cut(s) 62, 904, 1579
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 3 cut(s) 30, 151, 1096
BspPI GGATC 3 cut(s) 1212, 1373, 1550
BspQI GCTCTTC 1 cut(s) 1605
BspT104I TTCGAA 1 cut(s) 1589
BspT107I GGYRCC 1 cut(s) 28
BspTI CTTAAG 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 1007
BsrI ACTGG 2 cut(s) 153, 1431
BssECI CCNNGG 4 cut(s) 144, 1080, 1188, 1361
BssMI GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
BssT1I CCWWGG 1 cut(s) 1188
Bst2UI CCWGG 1 cut(s) 145
Bst6I CTCTTC 3 cut(s) 171, 933, 1605
BstAFI CTTAAG 1 cut(s) 98
BstBI TTCGAA 1 cut(s) 1589
BstDEI CTNAG 3 cut(s) 49, 891, 1566
BstDSI CCRYGG 2 cut(s) 1188, 1361
BstENI CCTNNNNNAGG 1 cut(s) 459
BstF5I GGATG 2 cut(s) 91, 1453
BstKTI GATC 6 cut(s) 367, 558, 916, 1207, 1368, 1558
BstMAI GTCTC 5 cut(s) 18, 152, 542, 1131, 1480
BstMBI GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
BstMCI CGRYCG 1 cut(s) 814
BstMWI GCNNNNNNNGC 4 cut(s) 926, 1109, 1568, 1571
BstNI CCWGG 1 cut(s) 145
BstSCI CCNGG 3 cut(s) 143, 813, 1080
BstSFI CTRYAG 2 cut(s) 477, 1314
BstSLI GKGCMC 1 cut(s) 922
BstV1I GCAGC 6 cut(s) 179, 295, 1259, 1561, 1574, 1583
BstV2I GAAGAC 3 cut(s) 435, 745, 759
BsuRI GGCC 1 cut(s) 963
BtgI CCRYGG 2 cut(s) 1188, 1361
BtsCI GGATG 2 cut(s) 91, 1453
BtsI GCAGTG 2 cut(s) 688, 1098
BtsIMutI CAGTG 8 cut(s) 160, 237, 663, 688, 765, 1098, 1206, 1438
CciI TCATGA 1 cut(s) 970
CseI GACGC 1 cut(s) 764
Csp6I GTAC 2 cut(s) 770, 818
CspCI CAANNNNNGTGG 2 cut(s) 1087, 1122
CviAII CATG 7 cut(s) 82, 727, 829, 881, 971, 1189, 1677
CviQI GTAC 2 cut(s) 770, 818
DdeI CTNAG 3 cut(s) 49, 891, 1566
DpnI GATC 6 cut(s) 366, 557, 915, 1206, 1367, 1557
DpnII GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
DraI TTTAAA 4 cut(s) 783, 843, 1356, 1666
Eam1104I CTCTTC 3 cut(s) 171, 933, 1605
EarI CTCTTC 3 cut(s) 171, 933, 1605
Eco130I CCWWGG 1 cut(s) 1188
Eco147I AGGCCT 1 cut(s) 963
Eco32I GATATC 1 cut(s) 279
Eco57I CTGAAG 3 cut(s) 507, 651, 1065
Eco88I CYCGRG 2 cut(s) 324, 590
EcoNI CCTNNNNNAGG 1 cut(s) 459
EcoRII CCWGG 1 cut(s) 143
EcoRV GATATC 1 cut(s) 279
EcoT14I CCWWGG 1 cut(s) 1188
ErhI CCWWGG 1 cut(s) 1188
Esp3I CGTCTC 3 cut(s) 152, 1131, 1480
FaeI CATG 7 cut(s) 85, 730, 832, 884, 974, 1192, 1680
FalI AAGNNNNNCTT 2 cut(s) 744, 776
FaqI GGGAC 1 cut(s) 478
FatI CATG 7 cut(s) 81, 726, 828, 880, 970, 1188, 1676
FauI CCCGC 2 cut(s) 112, 1567
FblI GTMKAC 2 cut(s) 480, 696
Fnu4HI GCNGC 7 cut(s) 168, 309, 679, 1248, 1563, 1572, 1575
FokI GGATG 2 cut(s) 98, 1460
Fsp4HI GCNGC 7 cut(s) 168, 309, 679, 1248, 1563, 1572, 1575
FspBI CTAG 3 cut(s) 402, 450, 1062
GluI GCNGC 7 cut(s) 168, 309, 679, 1248, 1563, 1572, 1575
GsaI CCCAGC 1 cut(s) 1254
HaeIII GGCC 1 cut(s) 963
HapII CCGG 3 cut(s) 17, 814, 1082
HgaI GACGC 1 cut(s) 764
Hin1II CATG 7 cut(s) 85, 730, 832, 884, 974, 1192, 1680
HinfI GANTC 8 cut(s) 134, 344, 370, 407, 536, 867, 947, 1154
HpaII CCGG 3 cut(s) 17, 814, 1082
HphI GGTGA 4 cut(s) 133, 185, 545, 595
Hpy166II GTNNAC 5 cut(s) 389, 481, 697, 720, 920
Hpy188I TCNGA 6 cut(s) 133, 369, 526, 616, 631, 1485
Hpy8I GTNNAC 5 cut(s) 389, 481, 697, 720, 920
HpyAV CCTTC 7 cut(s) 245, 353, 484, 953, 1051, 1334, 1541
HpyCH4IV ACGT 2 cut(s) 483, 722
HpyCH4V TGCA 5 cut(s) 167, 515, 899, 920, 1235
HpyF10VI GCNNNNNNNGC 4 cut(s) 926, 1109, 1568, 1571
HpyF3I CTNAG 3 cut(s) 49, 891, 1566
HpySE526I ACGT 2 cut(s) 483, 722
Hsp92II CATG 7 cut(s) 85, 730, 832, 884, 974, 1192, 1680
Kzo9I GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
LguI GCTCTTC 1 cut(s) 1605
LmnI GCTCC 1 cut(s) 265
Lsp1109I GCAGC 6 cut(s) 179, 295, 1259, 1561, 1574, 1583
LweI GCATC 2 cut(s) 1030, 1288
MaeI CTAG 3 cut(s) 402, 450, 1062
MaeII ACGT 2 cut(s) 483, 722
MaeIII GTNAC 5 cut(s) 22, 44, 88, 139, 1472
MalI GATC 6 cut(s) 366, 557, 915, 1206, 1367, 1557
MboI GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
MfeI CAATTG 3 cut(s) 295, 641, 1021
MhlI GDGCHC 2 cut(s) 922, 1600
MluCI AATT 9 cut(s) 187, 295, 641, 786, 792, 988, 1021, 1551, 1632
MlyI GAGTC 3 cut(s) 416, 876, 956
MmeI TCCRAC 2 cut(s) 249, 1030
MroXI GAANNNNTTC 1 cut(s) 636
MseI TTAA 6 cut(s) 99, 782, 842, 954, 1355, 1665
MslI CAYNNNNRTG 2 cut(s) 84, 975
MspA1I CMGCKG 3 cut(s) 170, 1250, 1574
MspCI CTTAAG 1 cut(s) 98
MspI CCGG 3 cut(s) 17, 814, 1082
MspR9I CCNGG 3 cut(s) 145, 815, 1082
MssI GTTTAAAC 1 cut(s) 843
MunI CAATTG 3 cut(s) 295, 641, 1021
Mva1269I GAATGC 1 cut(s) 1421
MvaI CCWGG 1 cut(s) 145
MwoI GCNNNNNNNGC 4 cut(s) 926, 1109, 1568, 1571
NciI CCSGG 2 cut(s) 815, 1082
NcoI CCATGG 1 cut(s) 1188
NdeII GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
NlaIII CATG 7 cut(s) 85, 730, 832, 884, 974, 1192, 1680
NlaIV GGNNCC 3 cut(s) 30, 151, 1096
NmuCI GTSAC 4 cut(s) 22, 88, 139, 1472
NspV TTCGAA 1 cut(s) 1589
PaeR7I CTCGAG 1 cut(s) 590
PagI TCATGA 1 cut(s) 970
PceI AGGCCT 1 cut(s) 963
PciSI GCTCTTC 1 cut(s) 1605
PctI GAATGC 1 cut(s) 1421
PdmI GAANNNNTTC 1 cut(s) 636
PfeI GAWTC 5 cut(s) 134, 344, 370, 536, 1154
PkrI GCNGC 7 cut(s) 169, 310, 680, 1249, 1564, 1573, 1576
PleI GAGTC 3 cut(s) 415, 875, 955
PmeI GTTTAAAC 1 cut(s) 843
PpsI GAGTC 3 cut(s) 415, 875, 955
Psp6I CCWGG 1 cut(s) 143
PspFI CCCAGC 1 cut(s) 1250
PspGI CCWGG 1 cut(s) 143
PspN4I GGNNCC 3 cut(s) 30, 151, 1096
PvuII CAGCTG 3 cut(s) 170, 1250, 1574
RsaI GTAC 2 cut(s) 771, 819
RsaNI GTAC 2 cut(s) 770, 818
RseI CAYNNNNRTG 2 cut(s) 84, 975
SapI GCTCTTC 1 cut(s) 1605
SaqAI TTAA 6 cut(s) 99, 782, 842, 954, 1355, 1665
SatI GCNGC 7 cut(s) 168, 309, 679, 1248, 1563, 1572, 1575
Sau3AI GATC 6 cut(s) 364, 555, 913, 1204, 1365, 1555
SchI GAGTC 3 cut(s) 416, 876, 956
ScrFI CCNGG 3 cut(s) 145, 815, 1082
SduI GDGCHC 2 cut(s) 922, 1600
SfaNI GCATC 2 cut(s) 1030, 1288
SfcI CTRYAG 2 cut(s) 477, 1314
Sfr274I CTCGAG 1 cut(s) 590
SfuI TTCGAA 1 cut(s) 1589
SlaI CTCGAG 1 cut(s) 590
SmiMI CAYNNNNRTG 2 cut(s) 84, 975
SmlI CTYRAG 4 cut(s) 98, 282, 590, 1067
SmoI CTYRAG 4 cut(s) 98, 282, 590, 1067
Sse9I AATT 9 cut(s) 187, 295, 641, 786, 792, 988, 1021, 1551, 1632
SseBI AGGCCT 1 cut(s) 963
SsiI CCGC 5 cut(s) 20, 119, 679, 1560, 1577
SspMI CTAG 3 cut(s) 402, 450, 1062
StuI AGGCCT 1 cut(s) 963
StyD4I CCNGG 3 cut(s) 143, 813, 1080
StyI CCWWGG 1 cut(s) 1188
TaiI ACGT 2 cut(s) 486, 725
TaqI TCGA 4 cut(s) 591, 1307, 1399, 1589
TasI AATT 9 cut(s) 187, 295, 641, 786, 792, 988, 1021, 1551, 1632
TauI GCSGC 1 cut(s) 681
TfiI GAWTC 5 cut(s) 134, 344, 370, 536, 1154
Tru1I TTAA 6 cut(s) 99, 782, 842, 954, 1355, 1665
Tru9I TTAA 6 cut(s) 99, 782, 842, 954, 1355, 1665
TscAI CASTG 8 cut(s) 160, 237, 663, 688, 772, 1105, 1206, 1438
TseFI GTSAC 4 cut(s) 22, 88, 139, 1472
TseI GCWGC 6 cut(s) 167, 308, 1247, 1562, 1571, 1574
Tsp45I GTSAC 4 cut(s) 22, 88, 139, 1472
TspDTI ATGAA 7 cut(s) 222, 845, 959, 987, 1019, 1242, 1476
TspGWI ACGGA 2 cut(s) 303, 940
TspRI CASTG 8 cut(s) 160, 237, 663, 688, 772, 1105, 1206, 1438
Vha464I CTTAAG 1 cut(s) 98
VneI GTGCAC 1 cut(s) 918
XagI CCTNNNNNAGG 1 cut(s) 459
XapI RAATTY 1 cut(s) 786
XhoI CTCGAG 1 cut(s) 590
XmiI GTMKAC 2 cut(s) 480, 696
XmnI GAANNNNTTC 1 cut(s) 636
XspI CTAG 3 cut(s) 402, 450, 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.