Rh6AG502500

phosphatase 2C

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
67606329 .. 67610685
4357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG502500.1

Sequence Viewer

Length: 1452 bp
ATGGAGGAGATGTCACCGGCGGTCGCGGTGCCATTTAGAGTAGGTAACTCAGTCTGTGATAACCCAACTATAGCTACCCACATGAATATTACAAGTCTTAAGCTAATGACAGACAGTGCGGGGTTGCTATCTGATTCTGTCACCAGGAGTTCCACTGAGGCGGTTGCAGCTGGTGAAGAGGATTGTAATTGTAGTCATTCAGGGAATGAAGTTACTGTTGTTGCAGTATCGGTTGCAGAAGAGGAAAAAGGAGGAGGAGATCCATTGTTAGATATGATACCTCAAGACGAAAGCGATCGGGTTGCTACTGGTAACGTGATGGCTGGGGAAAGTGAGGAAGATGATTGCTTATCATTGGAGGGTGATCAGATACTTGATAGCTCTTGTTCATTCTCAGTGGCGAGTGAGTCAAGTAGCTTATGTTTAGAGGACTTCCTGGTGTACGAGACAACCTCTGAAGGAGTAACACTGAGTTCTATAGACATTGACAGGAACAGCTGTTTTGGTGATGTTGCTAAGGTGGCTGATATAGGTGATTCAAAAATTGAGACAGAGATCACTACTGATCCACTTTCTTTGTCAGTGAGCCTTGGGGAAGAAACTGGTCATGGGTCTGACCCAAAGCCATCTGATGTTGTTGTTCAATTGCCTGTGGAAGTAGGGGTCAAAGAAACAGTCAGCCGCAGTGTTTTTGAGGTAGAATATGTTCCACTTTGGGGGTTTACATCCTTGTGTGGGAGAAGACCAGAGATGGAAGATGCATTAGCAACTGTACCTCAGTTTTCAAAGATTCCAATTCAAATGCTGATAGGTGACCGAGTACTGGATGGCATGAGCAAGTGTATAAATCAGACTGTTCATTTCTTTGGAGTCTATGATGGTCATGGAGGCTCTCAGGTGGCAAATTATTGTCGTGATCGTATGCATTTGGCTTTGGCGGAGGAGATAGAATTTGTTAAGGAGGGCCTAGTTCACACAAGTATCAAAGATAATTGCCTAGAGCAATGGAATAAGGCATTTACCAACTGTTTTCTTAAGGTTGATGCTGAAGTTGGAGGGAAGGATAGTCTTGATCCTGTTGCCCCTGAAACAGTTGGTTCCACTGCTGTTGTGGCCCTTATTTGTTCGTCTCATATCATAGTGGCAAACTGTGGTGATTCAAGAGCAGTTCTGTGTCGTGGGAAAGAACCCATGGCATTGTCAGTGGATCATAAACCAAATCGAGAAGATGAATATGCAAGAATTGAGGCAGCTGGAGGCAAGGTCATACAATGGAATGGGCATCGTGTGTTTGGTGTTCTTGCTATGTCAAGGTCAATAGGTATGTGCTTCAACATTAATTTTTTTTTCCTCCTTCTAAATTCATGCTCTCCAGATGGTATTTACTTAAATTTCACGAATCACCAACAAGTTTGCTGTTTGTATGTAATTACTAAAGTAGCAAGCAGATAG

Protein Analysis

483

Amino Acids

51.99

Weight (kDa)

4.47

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 243 - 442 1e-40 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 28
AccII CGCG 1 cut(s) 26
AciI CCGC 6 cut(s) 20, 26, 119, 161, 682, 938
AclWI GGATC 4 cut(s) 254, 560, 1067, 1215
AcsI RAATTY 3 cut(s) 950, 1360, 1390
AcuI CTGAAG 2 cut(s) 477, 1068
AfaI GTAC 3 cut(s) 443, 774, 822
AfiI CCNNNNNNNGG 3 cut(s) 716, 735, 823
AflII CTTAAG 2 cut(s) 98, 1034
AgsI TTSAA 6 cut(s) 540, 644, 786, 800, 1161, 1333
AjnI CCWGG 2 cut(s) 143, 435
AluBI AGCT 7 cut(s) 74, 103, 170, 381, 417, 498, 1253
AluI AGCT 7 cut(s) 74, 103, 170, 381, 417, 498, 1253
Alw26I GTCTC 3 cut(s) 440, 542, 1134
AlwI GGATC 4 cut(s) 254, 560, 1067, 1215
AoxI GGCC 2 cut(s) 964, 1113
ApeKI GCWGC 2 cut(s) 167, 1250
ApoI RAATTY 3 cut(s) 950, 1360, 1390
ArsI GACNNNNNNTTYG 2 cut(s) 660, 692
AseI ATTAAT 1 cut(s) 1338
Asp700I GAANNNNTTC 1 cut(s) 705
AspS9I GGNCC 2 cut(s) 964, 1114
AsuHPI GGTGA 9 cut(s) 6, 133, 185, 374, 518, 545, 824, 1166, 1394
BaeI ACNNNNGTAYC 2 cut(s) 964, 997
BanI GGYRCC 1 cut(s) 28
BbsI GAAGAC 1 cut(s) 748
BbvI GCAGC 2 cut(s) 179, 1262
BccI CCATC 6 cut(s) 313, 634, 745, 821, 872, 1370
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BciT130I CCWGG 2 cut(s) 145, 437
BclI TGATCA 1 cut(s) 364
BcoDI GTCTC 3 cut(s) 440, 542, 1134
BfaI CTAG 2 cut(s) 968, 998
BfmI CTRYAG 2 cut(s) 69, 477
BfrI CTTAAG 2 cut(s) 98, 1034
BisI GCNGC 3 cut(s) 168, 682, 1251
BlsI GCNGC 3 cut(s) 169, 683, 1252
BmcAI AGTACT 1 cut(s) 822
Bme1390I CCNGG 2 cut(s) 145, 437
BmgT120I GGNCC 2 cut(s) 964, 1114
BmiI GGNNCC 2 cut(s) 30, 1099
BmrFI CCNGG 2 cut(s) 145, 437
BmsI GCATC 3 cut(s) 748, 1033, 1291
BpiI GAAGAC 1 cut(s) 748
BplI GAGNNNNNCTC 2 cut(s) 437, 469
BpmI CTGGAG 2 cut(s) 1275, 1356
Bpu10I CCTNAGC 1 cut(s) 516
BpuEI CTTGAG 1 cut(s) 267
BsaJI CCNNGG 2 cut(s) 589, 1191
BsaXI ACNNNNNCTCC 3 cut(s) 26, 1248, 1278
Bsc4I CCNNNNNNNGG 3 cut(s) 716, 735, 823
Bse118I RCCGGY 1 cut(s) 16
Bse1I ACTGG 3 cut(s) 313, 607, 828
Bse3DI GCAATG 1 cut(s) 1010
BseBI CCWGG 2 cut(s) 145, 437
BseDI CCNNGG 2 cut(s) 589, 1191
BseGI GGATG 2 cut(s) 725, 832
BseLI CCNNNNNNNGG 3 cut(s) 716, 735, 823
BseMI GCAATG 1 cut(s) 1010
BseMII CTCAG 6 cut(s) 63, 147, 408, 461, 791, 908
BseNI ACTGG 3 cut(s) 313, 607, 828
BseRI GAGGAG 4 cut(s) 20, 267, 270, 956
BseXI GCAGC 2 cut(s) 179, 1262
BseYI CCCAGC 1 cut(s) 323
Bsh1236I CGCG 1 cut(s) 26
Bsh1285I CGRYCG 2 cut(s) 24, 298
BshFI GGCC 2 cut(s) 966, 1115
BshNI GGYRCC 1 cut(s) 28
BsiEI CGRYCG 2 cut(s) 24, 298
BsiSI CCGG 1 cut(s) 17
BslI CCNNNNNNNGG 3 cut(s) 716, 735, 823
BsmAI GTCTC 3 cut(s) 440, 542, 1134
BsmBI CGTCTC 1 cut(s) 1134
BsnI GGCC 2 cut(s) 966, 1115
Bsp143I GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
Bsp19I CCATGG 1 cut(s) 1191
BspACI CCGC 6 cut(s) 20, 26, 119, 161, 682, 938
BspANI GGCC 2 cut(s) 966, 1115
BspCNI CTCAG 6 cut(s) 62, 148, 407, 462, 790, 907
BspFNI CGCG 1 cut(s) 26
BspLI GGNNCC 2 cut(s) 30, 1099
BspPI GGATC 4 cut(s) 254, 560, 1067, 1215
BspT107I GGYRCC 1 cut(s) 28
BspTI CTTAAG 2 cut(s) 98, 1034
BsrDI GCAATG 1 cut(s) 1010
BsrFI RCCGGY 1 cut(s) 16
BsrI ACTGG 3 cut(s) 313, 607, 828
BssAI RCCGGY 1 cut(s) 16
BssECI CCNNGG 2 cut(s) 589, 1191
BssMI GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
BssT1I CCWWGG 2 cut(s) 589, 1191
Bst2UI CCWGG 2 cut(s) 145, 437
Bst4CI ACNGT 8 cut(s) 116, 217, 676, 772, 856, 1028, 1093, 1151
Bst6I CTCTTC 2 cut(s) 171, 234
BstAFI CTTAAG 2 cut(s) 98, 1034
BstC8I GCNNGC 1 cut(s) 1444
BstDEI CTNAG 7 cut(s) 49, 156, 394, 470, 516, 777, 894
BstDSI CCRYGG 1 cut(s) 1191
BstEII GGTNACC 1 cut(s) 812
BstF5I GGATG 2 cut(s) 725, 832
BstFNI CGCG 1 cut(s) 26
BstKTI GATC 8 cut(s) 262, 298, 367, 558, 568, 919, 1075, 1210
BstMAI GTCTC 3 cut(s) 440, 542, 1134
BstMBI GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
BstMCI CGRYCG 2 cut(s) 24, 298
BstMWI GCNNNNNNNGC 3 cut(s) 167, 521, 1112
BstNI CCWGG 2 cut(s) 145, 437
BstPI GGTNACC 1 cut(s) 812
BstSCI CCNGG 2 cut(s) 143, 435
BstSFI CTRYAG 2 cut(s) 69, 477
BstUI CGCG 1 cut(s) 26
BstV1I GCAGC 2 cut(s) 179, 1262
BstV2I GAAGAC 1 cut(s) 748
BstX2I RGATCY 1 cut(s) 259
BstYI RGATCY 1 cut(s) 259
BsuRI GGCC 2 cut(s) 966, 1115
BtgI CCRYGG 1 cut(s) 1191
BtsCI GGATG 2 cut(s) 725, 832
BtsI GCAGTG 2 cut(s) 691, 1101
BtsIMutI CAGTG 8 cut(s) 121, 153, 402, 467, 588, 691, 1101, 1209
Cac8I GCNNGC 1 cut(s) 1444
Cfr10I RCCGGY 1 cut(s) 16
Cfr13I GGNCC 2 cut(s) 964, 1114
Csp6I GTAC 3 cut(s) 442, 773, 821
CspCI CAANNNNNGTGG 4 cut(s) 558, 593, 1090, 1125
CviAII CATG 6 cut(s) 82, 608, 832, 884, 1192, 1365
CviQI GTAC 3 cut(s) 442, 773, 821
DdeI CTNAG 7 cut(s) 49, 156, 394, 470, 516, 777, 894
DpnI GATC 8 cut(s) 261, 297, 366, 557, 567, 918, 1074, 1209
DpnII GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
Eam1104I CTCTTC 2 cut(s) 171, 234
EarI CTCTTC 2 cut(s) 171, 234
EciI GGCGGA 1 cut(s) 953
Eco130I CCWWGG 2 cut(s) 589, 1191
Eco57I CTGAAG 2 cut(s) 477, 1068
Eco91I GGTNACC 1 cut(s) 812
EcoO109I RGGNCCY 1 cut(s) 964
EcoO65I GGTNACC 1 cut(s) 812
EcoRII CCWGG 2 cut(s) 143, 435
EcoT14I CCWWGG 2 cut(s) 589, 1191
EcoT22I ATGCAT 2 cut(s) 763, 927
ErhI CCWWGG 2 cut(s) 589, 1191
Esp3I CGTCTC 1 cut(s) 1134
FaeI CATG 6 cut(s) 85, 611, 835, 887, 1195, 1368
FatI CATG 6 cut(s) 81, 607, 831, 883, 1191, 1364
FauI CCCGC 1 cut(s) 112
FbaI TGATCA 1 cut(s) 364
Fnu4HI GCNGC 3 cut(s) 168, 682, 1251
FokI GGATG 2 cut(s) 712, 839
Fsp4HI GCNGC 3 cut(s) 168, 682, 1251
FspBI CTAG 2 cut(s) 968, 998
GluI GCNGC 3 cut(s) 168, 682, 1251
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 2 cut(s) 1275, 1356
HaeIII GGCC 2 cut(s) 966, 1115
HapII CCGG 1 cut(s) 17
Hin1II CATG 6 cut(s) 85, 611, 835, 887, 1195, 1368
HinfI GANTC 7 cut(s) 134, 407, 536, 790, 870, 1157, 1399
HpaII CCGG 1 cut(s) 17
HphI GGTGA 9 cut(s) 6, 133, 185, 374, 518, 545, 824, 1166, 1394
Hpy166II GTNNAC 3 cut(s) 442, 723, 973
Hpy188I TCNGA 6 cut(s) 133, 369, 457, 616, 631, 852
Hpy188III TCNNGA 7 cut(s) 284, 914, 1070, 1161, 1223, 1373, 1396
Hpy8I GTNNAC 3 cut(s) 442, 723, 973
HpyAV CCTTC 3 cut(s) 452, 1054, 1364
HpyCH4III ACNGT 8 cut(s) 116, 217, 676, 772, 856, 1028, 1093, 1151
HpyCH4IV ACGT 1 cut(s) 315
HpyCH4V TGCA 6 cut(s) 167, 224, 236, 761, 925, 1238
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 521, 1112
HpyF3I CTNAG 7 cut(s) 49, 156, 394, 470, 516, 777, 894
HpySE526I ACGT 1 cut(s) 315
Hsp92II CATG 6 cut(s) 85, 611, 835, 887, 1195, 1368
Ksp22I TGATCA 1 cut(s) 364
Kzo9I GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
Lsp1109I GCAGC 2 cut(s) 179, 1262
LweI GCATC 3 cut(s) 748, 1033, 1291
MaeI CTAG 2 cut(s) 968, 998
MaeII ACGT 1 cut(s) 315
MaeIII GTNAC 7 cut(s) 12, 44, 139, 211, 311, 463, 812
MalI GATC 8 cut(s) 261, 297, 366, 557, 567, 918, 1074, 1209
MboI GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
MboII GAAGA 7 cut(s) 188, 251, 350, 608, 753, 767, 1238
MfeI CAATTG 1 cut(s) 644
MflI RGATCY 1 cut(s) 259
MlyI GAGTC 2 cut(s) 416, 879
MmeI TCCRAC 1 cut(s) 1033
Mph1103I ATGCAT 2 cut(s) 763, 927
MroXI GAANNNNTTC 1 cut(s) 705
MseI TTAA 5 cut(s) 99, 957, 1035, 1338, 1388
MslI CAYNNNNRTG 1 cut(s) 730
MspA1I CMGCKG 3 cut(s) 170, 498, 1253
MspCI CTTAAG 2 cut(s) 98, 1034
MspI CCGG 1 cut(s) 17
MspR9I CCNGG 2 cut(s) 145, 437
MunI CAATTG 1 cut(s) 644
MvaI CCWGG 2 cut(s) 145, 437
MvnI CGCG 1 cut(s) 26
MwoI GCNNNNNNNGC 3 cut(s) 167, 521, 1112
NcoI CCATGG 1 cut(s) 1191
NdeII GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
NlaIII CATG 6 cut(s) 85, 611, 835, 887, 1195, 1368
NlaIV GGNNCC 2 cut(s) 30, 1099
NmuCI GTSAC 3 cut(s) 12, 139, 812
NsiI ATGCAT 2 cut(s) 763, 927
PdmI GAANNNNTTC 1 cut(s) 705
PfeI GAWTC 5 cut(s) 134, 536, 790, 1157, 1399
PkrI GCNGC 3 cut(s) 169, 683, 1252
Ple19I CGATCG 1 cut(s) 298
PleI GAGTC 2 cut(s) 415, 878
PpsI GAGTC 2 cut(s) 415, 878
PshBI ATTAAT 1 cut(s) 1338
Psp6I CCWGG 2 cut(s) 143, 435
PspEI GGTNACC 1 cut(s) 812
PspFI CCCAGC 1 cut(s) 323
PspGI CCWGG 2 cut(s) 143, 435
PspN4I GGNNCC 2 cut(s) 30, 1099
PspPI GGNCC 2 cut(s) 964, 1114
PsrI GAACNNNNNNTAC 2 cut(s) 690, 722
PsuI RGATCY 1 cut(s) 259
PvuI CGATCG 1 cut(s) 298
PvuII CAGCTG 3 cut(s) 170, 498, 1253
RsaI GTAC 3 cut(s) 443, 774, 822
RsaNI GTAC 3 cut(s) 442, 773, 821
RseI CAYNNNNRTG 1 cut(s) 730
SaqAI TTAA 5 cut(s) 99, 957, 1035, 1338, 1388
SatI GCNGC 3 cut(s) 168, 682, 1251
Sau3AI GATC 8 cut(s) 259, 295, 364, 555, 565, 916, 1072, 1207
Sau96I GGNCC 2 cut(s) 964, 1114
ScaI AGTACT 1 cut(s) 822
SchI GAGTC 2 cut(s) 416, 879
ScrFI CCNGG 2 cut(s) 145, 437
SfaNI GCATC 3 cut(s) 748, 1033, 1291
SfcI CTRYAG 2 cut(s) 69, 477
SgrAI CRCCGGYG 1 cut(s) 16
SmiMI CAYNNNNRTG 1 cut(s) 730
SmlI CTYRAG 3 cut(s) 98, 282, 1034
SmoI CTYRAG 3 cut(s) 98, 282, 1034
SsiI CCGC 6 cut(s) 20, 26, 119, 161, 682, 938
SspI AATATT 1 cut(s) 88
SspMI CTAG 2 cut(s) 968, 998
StyD4I CCNGG 2 cut(s) 143, 435
StyI CCWWGG 2 cut(s) 589, 1191
TaaI ACNGT 8 cut(s) 116, 217, 676, 772, 856, 1028, 1093, 1151
TaiI ACGT 1 cut(s) 318
TaqI TCGA 1 cut(s) 1222
TaqII GACCGA 1 cut(s) 831
TatI WGTACW 1 cut(s) 820
TauI GCSGC 1 cut(s) 684
TfiI GAWTC 5 cut(s) 134, 536, 790, 1157, 1399
Tru1I TTAA 5 cut(s) 99, 957, 1035, 1338, 1388
Tru9I TTAA 5 cut(s) 99, 957, 1035, 1338, 1388
TscAI CASTG 8 cut(s) 121, 160, 402, 474, 588, 691, 1108, 1209
TseFI GTSAC 3 cut(s) 12, 139, 812
TseI GCWGC 2 cut(s) 167, 1250
Tsp45I GTSAC 3 cut(s) 12, 139, 812
TspDTI ATGAA 6 cut(s) 98, 222, 378, 848, 1245, 1353
TspRI CASTG 8 cut(s) 121, 160, 402, 474, 588, 691, 1108, 1209
Vha464I CTTAAG 2 cut(s) 98, 1034
VspI ATTAAT 1 cut(s) 1338
XapI RAATTY 3 cut(s) 950, 1360, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XmnI GAANNNNTTC 1 cut(s) 705
XspI CTAG 2 cut(s) 968, 998
ZrmI AGTACT 1 cut(s) 822
Zsp2I ATGCAT 2 cut(s) 763, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.