Rh6DG505200

phosphatase 2C

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
65992467 .. 65995102
2636 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG505200.1

Sequence Viewer

Length: 1656 bp
ATGGAGGAGATGTCACCGGCGGTCGCGGTGCCATTTAGAGTAGGTAACTCAGTCTGTGATAACCCAACTATAGCTACCCACATGAATATTACAAGTCTTAAGCTAATGACAGACAGTGCGGGGTTGCTATCTGATTCTGTCACCAGGAGTTCCACTGAGGCGGTTGCAGCTGGCGAAGAGGATTGTAATTGTAGTCATTCAGGGAATGAAGTTAGTGTTGTTGCAGTATCGGTCGCAGAAGAGGAAAAAGGAGGAGGAGATCCATTGTTAGATATGATACCTCAAGACGAAAGCAATCGGGTTGCTACTGGTAATGTGATGGCTGGGGAAAGTGAGGAAGATGATTGCTTATCATTGGAGGGTGATCAGATACTTGATAGCTCTTGTTCATTCTCAGTGGCGAGTGAGTCAAGTAGCTTATGTTTAGAGGACTTCCTGGTGTATGAGACAACCTCTGAAGGAGTAACACTGAGTTCTATAGACATTGACAGGAACAGTTGTTTTGGTGATGTTACTAAGGTGGCTGATATAGGTGATTCAAAAATTGAGACAGAGATCACTACTGATCCACTTTCTTTCTCAGTGAGCCTTGGGGAAGAAACTGGTCATGGGTCTGACCCAATGCCATCTGATGTTGTTGTTCAACTGCCTGTGGAAGTAGGGGTCAAAGAAACAGTCAGCCGCAGTGTTTTTGAGGTAGAATATGTTCCACTTTGGGGGTTTACATCCTTGTGTGGGAGAAGACCAGAGATGGAAGATGCATTAGCAACTGTACCTCAGTTTTCAAAGATTCCAATTCAAATGCTGATAGGTGACCGAGTACTGGATGGCATGAGCAAGTGTATAAATCAGACTGTTCATTTCTTTGGAGTCTATGATGGTCATGGAGGCTCTCAGGTGGCAAATTATTGTCGTGATCGTATGCATTTGGCTTTGGCGGAGGAGATAGAATTTGTTAAGGAGGGCCTAGTTCACACAAGTATCAAAGATAATTGCCTAGAGCAATGGAATAAGGCATTTACCAACTGTTTTCTTAAGGTTGATGCTGAAGTTGGAGGGAAGGATAGTCTTGATCCTGTTGCCCCTGAAACAGTTGGTTCCACTGCTGTTGTGGCCCTTATTTGTTCGTCTCATATCATAGTGTCAAACTGTGGTGATTCAAGAGCAGTTCTGTGTCGTGGGAAAGAACCCATGGCATTGTCAGTGGATCATAAACCAAATCGAGAAGATGAATATGCAAGAATTGAGGCAGCTGGAGGCAAGGTCATACAATGGAATGGGCATCGTGTGTTTGGTGTTCTTGCTATGTCAAGGTCAATAGGCGATAGATATTTAAAACCATGGATCATTCCAGATCCAGAAGTGATGTTTATTCCTCGAACCAAAGATGATGAATGCCTCATTTTAGCCAGTGATGGTTTATGGGATGTTATGACGAATGAAGAAGCGTGTGACCTTGCTCGGAGACGAATACTCTTATGGCACAAGAAGAATGGTGTTACACTTCCACTGGAAAGAGGTGAGGGAATTGATCCTGCTGCTCAAGCAGCGGCGGAGTTCCTCTCCAGCCGTGCCCTTCAAAAAGGAAGTAAGGACAACATCACGGTGATTGTGATAGATTTGAAGGCTCAGAGGAAGTTTAAAAGCAAAACATGA

Protein Analysis

551

Amino Acids

59.67

Weight (kDa)

4.6

Isoelectric Point (pI)

49.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 243 - 534 2.5e-64 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 28
AccII CGCG 1 cut(s) 26
AciI CCGC 8 cut(s) 20, 26, 119, 161, 682, 938, 1550, 1553
AclWI GGATC 7 cut(s) 254, 560, 1067, 1215, 1349, 1352, 1526
AcsI RAATTY 1 cut(s) 950
AcuI CTGAAG 2 cut(s) 477, 1068
AfaI GTAC 2 cut(s) 774, 822
AfiI CCNNNNNNNGG 3 cut(s) 716, 735, 823
AflII CTTAAG 2 cut(s) 98, 1034
AgsI TTSAA 7 cut(s) 540, 644, 786, 800, 1161, 1580, 1624
AjnI CCWGG 2 cut(s) 143, 435
AluBI AGCT 6 cut(s) 74, 103, 170, 381, 417, 1253
AluI AGCT 6 cut(s) 74, 103, 170, 381, 417, 1253
Alw26I GTCTC 4 cut(s) 440, 542, 1134, 1459
AlwI GGATC 7 cut(s) 254, 560, 1067, 1215, 1349, 1352, 1526
AoxI GGCC 2 cut(s) 964, 1113
ApeKI GCWGC 4 cut(s) 167, 1250, 1538, 1547
ApoI RAATTY 1 cut(s) 950
ArsI GACNNNNNNTTYG 2 cut(s) 660, 692
Asp700I GAANNNNTTC 1 cut(s) 705
AspS9I GGNCC 2 cut(s) 964, 1114
AsuHPI GGTGA 9 cut(s) 6, 133, 374, 518, 545, 824, 1166, 1532, 1618
BaeGI GKGCMC 1 cut(s) 1576
BaeI ACNNNNGTAYC 2 cut(s) 964, 997
BanI GGYRCC 1 cut(s) 28
BbsI GAAGAC 1 cut(s) 748
BbvI GCAGC 4 cut(s) 179, 1262, 1525, 1559
BccI CCATC 6 cut(s) 313, 634, 745, 821, 872, 1409
BceAI ACGGC 1 cut(s) 1554
BciT130I CCWGG 2 cut(s) 145, 437
BclI TGATCA 1 cut(s) 364
BcoDI GTCTC 4 cut(s) 440, 542, 1134, 1459
BfaI CTAG 2 cut(s) 968, 998
BfmI CTRYAG 2 cut(s) 69, 477
BfrI CTTAAG 2 cut(s) 98, 1034
BisI GCNGC 6 cut(s) 168, 682, 1251, 1539, 1548, 1551
BlsI GCNGC 6 cut(s) 169, 683, 1252, 1540, 1549, 1552
BmcAI AGTACT 1 cut(s) 822
Bme1390I CCNGG 2 cut(s) 145, 437
BmgT120I GGNCC 2 cut(s) 964, 1114
BmiI GGNNCC 2 cut(s) 30, 1099
BmrFI CCNGG 2 cut(s) 145, 437
BmsI GCATC 3 cut(s) 748, 1033, 1291
BpiI GAAGAC 1 cut(s) 748
BplI GAGNNNNNCTC 4 cut(s) 437, 469, 1547, 1579
BpmI CTGGAG 2 cut(s) 1275, 1549
BpuEI CTTGAG 2 cut(s) 267, 1527
BsaJI CCNNGG 3 cut(s) 589, 1191, 1340
BsaXI ACNNNNNCTCC 3 cut(s) 26, 1248, 1278
Bsc4I CCNNNNNNNGG 3 cut(s) 716, 735, 823
Bse118I RCCGGY 1 cut(s) 16
Bse1I ACTGG 5 cut(s) 313, 607, 828, 1410, 1515
Bse3DI GCAATG 1 cut(s) 1010
BseBI CCWGG 2 cut(s) 145, 437
BseDI CCNNGG 3 cut(s) 589, 1191, 1340
BseGI GGATG 3 cut(s) 725, 832, 1432
BseLI CCNNNNNNNGG 3 cut(s) 716, 735, 823
BseMI GCAATG 1 cut(s) 1010
BseMII CTCAG 8 cut(s) 63, 147, 408, 461, 594, 791, 908, 1643
BseNI ACTGG 5 cut(s) 313, 607, 828, 1410, 1515
BseRI GAGGAG 4 cut(s) 20, 267, 270, 956
BseSI GKGCMC 1 cut(s) 1576
BseXI GCAGC 4 cut(s) 179, 1262, 1525, 1559
BseYI CCCAGC 1 cut(s) 323
Bsh1236I CGCG 1 cut(s) 26
Bsh1285I CGRYCG 2 cut(s) 24, 234
BshFI GGCC 2 cut(s) 966, 1115
BshNI GGYRCC 1 cut(s) 28
BsiEI CGRYCG 2 cut(s) 24, 234
BsiSI CCGG 1 cut(s) 17
BslI CCNNNNNNNGG 3 cut(s) 716, 735, 823
BsmAI GTCTC 4 cut(s) 440, 542, 1134, 1459
BsmBI CGTCTC 2 cut(s) 1134, 1459
BsmI GAATGC 1 cut(s) 1400
BsnI GGCC 2 cut(s) 966, 1115
Bsp1286I GDGCHC 1 cut(s) 1576
Bsp19I CCATGG 2 cut(s) 1191, 1340
BspACI CCGC 8 cut(s) 20, 26, 119, 161, 682, 938, 1550, 1553
BspANI GGCC 2 cut(s) 966, 1115
BspCNI CTCAG 8 cut(s) 62, 148, 407, 462, 593, 790, 907, 1642
BspFNI CGCG 1 cut(s) 26
BspLI GGNNCC 2 cut(s) 30, 1099
BspPI GGATC 7 cut(s) 254, 560, 1067, 1215, 1349, 1352, 1526
BspT107I GGYRCC 1 cut(s) 28
BspTI CTTAAG 2 cut(s) 98, 1034
BsrDI GCAATG 1 cut(s) 1010
BsrFI RCCGGY 1 cut(s) 16
BsrI ACTGG 5 cut(s) 313, 607, 828, 1410, 1515
BssAI RCCGGY 1 cut(s) 16
BssECI CCNNGG 3 cut(s) 589, 1191, 1340
BssT1I CCWWGG 3 cut(s) 589, 1191, 1340
Bst2UI CCWGG 2 cut(s) 145, 437
Bst4CI ACNGT 9 cut(s) 116, 497, 676, 772, 856, 1028, 1093, 1151, 1606
Bst6I CTCTTC 2 cut(s) 171, 234
BstAFI CTTAAG 2 cut(s) 98, 1034
BstC8I GCNNGC 1 cut(s) 172
BstDEI CTNAG 9 cut(s) 49, 156, 394, 470, 516, 580, 777, 894, 1629
BstDSI CCRYGG 2 cut(s) 1191, 1340
BstEII GGTNACC 1 cut(s) 812
BstF5I GGATG 3 cut(s) 725, 832, 1432
BstFNI CGCG 1 cut(s) 26
BstMAI GTCTC 4 cut(s) 440, 542, 1134, 1459
BstMCI CGRYCG 2 cut(s) 24, 234
BstMWI GCNNNNNNNGC 4 cut(s) 167, 1112, 1544, 1547
BstNI CCWGG 2 cut(s) 145, 437
BstPI GGTNACC 1 cut(s) 812
BstSCI CCNGG 2 cut(s) 143, 435
BstSFI CTRYAG 2 cut(s) 69, 477
BstSLI GKGCMC 1 cut(s) 1576
BstUI CGCG 1 cut(s) 26
BstV1I GCAGC 4 cut(s) 179, 1262, 1525, 1559
BstV2I GAAGAC 1 cut(s) 748
BstX2I RGATCY 2 cut(s) 259, 1354
BstYI RGATCY 2 cut(s) 259, 1354
BsuRI GGCC 2 cut(s) 966, 1115
BtgI CCRYGG 2 cut(s) 1191, 1340
BtsCI GGATG 3 cut(s) 725, 832, 1432
BtsI GCAGTG 2 cut(s) 691, 1101
Cac8I GCNNGC 1 cut(s) 172
Cfr10I RCCGGY 1 cut(s) 16
Cfr13I GGNCC 2 cut(s) 964, 1114
Csp6I GTAC 2 cut(s) 773, 821
CspCI CAANNNNNGTGG 2 cut(s) 1090, 1125
CviAII CATG 7 cut(s) 82, 608, 832, 884, 1192, 1341, 1653
CviQI GTAC 2 cut(s) 773, 821
DdeI CTNAG 9 cut(s) 49, 156, 394, 470, 516, 580, 777, 894, 1629
DraI TTTAAA 2 cut(s) 1335, 1642
Eam1104I CTCTTC 2 cut(s) 171, 234
EarI CTCTTC 2 cut(s) 171, 234
EciI GGCGGA 2 cut(s) 953, 1568
Eco130I CCWWGG 3 cut(s) 589, 1191, 1340
Eco57I CTGAAG 2 cut(s) 477, 1068
Eco91I GGTNACC 1 cut(s) 812
EcoO109I RGGNCCY 1 cut(s) 964
EcoO65I GGTNACC 1 cut(s) 812
EcoRII CCWGG 2 cut(s) 143, 435
EcoT14I CCWWGG 3 cut(s) 589, 1191, 1340
EcoT22I ATGCAT 2 cut(s) 763, 927
ErhI CCWWGG 3 cut(s) 589, 1191, 1340
Esp3I CGTCTC 2 cut(s) 1134, 1459
FaeI CATG 7 cut(s) 85, 611, 835, 887, 1195, 1344, 1656
FatI CATG 7 cut(s) 81, 607, 831, 883, 1191, 1340, 1652
FauI CCCGC 1 cut(s) 112
FbaI TGATCA 1 cut(s) 364
Fnu4HI GCNGC 6 cut(s) 168, 682, 1251, 1539, 1548, 1551
FokI GGATG 3 cut(s) 712, 839, 1439
Fsp4HI GCNGC 6 cut(s) 168, 682, 1251, 1539, 1548, 1551
FspBI CTAG 2 cut(s) 968, 998
GluI GCNGC 6 cut(s) 168, 682, 1251, 1539, 1548, 1551
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 2 cut(s) 1275, 1549
HaeIII GGCC 2 cut(s) 966, 1115
HapII CCGG 1 cut(s) 17
Hin1II CATG 7 cut(s) 85, 611, 835, 887, 1195, 1344, 1656
HinfI GANTC 6 cut(s) 134, 407, 536, 790, 870, 1157
HpaII CCGG 1 cut(s) 17
HphI GGTGA 9 cut(s) 6, 133, 374, 518, 545, 824, 1166, 1532, 1618
Hpy166II GTNNAC 2 cut(s) 723, 973
Hpy188I TCNGA 8 cut(s) 133, 369, 457, 616, 631, 852, 1464, 1632
Hpy188III TCNNGA 7 cut(s) 284, 914, 1070, 1161, 1223, 1352, 1358
Hpy8I GTNNAC 2 cut(s) 723, 973
HpyAV CCTTC 4 cut(s) 452, 1054, 1586, 1618
HpyCH4III ACNGT 9 cut(s) 116, 497, 676, 772, 856, 1028, 1093, 1151, 1606
HpyCH4V TGCA 5 cut(s) 167, 224, 761, 925, 1238
HpyF10VI GCNNNNNNNGC 4 cut(s) 167, 1112, 1544, 1547
HpyF3I CTNAG 9 cut(s) 49, 156, 394, 470, 516, 580, 777, 894, 1629
Hsp92II CATG 7 cut(s) 85, 611, 835, 887, 1195, 1344, 1656
Ksp22I TGATCA 1 cut(s) 364
Lsp1109I GCAGC 4 cut(s) 179, 1262, 1525, 1559
LweI GCATC 3 cut(s) 748, 1033, 1291
MaeI CTAG 2 cut(s) 968, 998
MaeIII GTNAC 8 cut(s) 12, 44, 139, 463, 511, 812, 1451, 1498
MboII GAAGA 9 cut(s) 188, 251, 350, 608, 753, 767, 1238, 1454, 1501
MflI RGATCY 2 cut(s) 259, 1354
MhlI GDGCHC 1 cut(s) 1576
MluCI AATT 8 cut(s) 187, 543, 795, 904, 950, 991, 1242, 1527
MlyI GAGTC 2 cut(s) 416, 879
MmeI TCCRAC 1 cut(s) 1033
Mph1103I ATGCAT 2 cut(s) 763, 927
MroXI GAANNNNTTC 1 cut(s) 705
MseI TTAA 5 cut(s) 99, 957, 1035, 1334, 1641
MslI CAYNNNNRTG 2 cut(s) 730, 1604
MspA1I CMGCKG 3 cut(s) 170, 1253, 1550
MspCI CTTAAG 2 cut(s) 98, 1034
MspI CCGG 1 cut(s) 17
MspR9I CCNGG 2 cut(s) 145, 437
Mva1269I GAATGC 1 cut(s) 1400
MvaI CCWGG 2 cut(s) 145, 437
MvnI CGCG 1 cut(s) 26
MwoI GCNNNNNNNGC 4 cut(s) 167, 1112, 1544, 1547
NcoI CCATGG 2 cut(s) 1191, 1340
NlaIII CATG 7 cut(s) 85, 611, 835, 887, 1195, 1344, 1656
NlaIV GGNNCC 2 cut(s) 30, 1099
NmuCI GTSAC 4 cut(s) 12, 139, 812, 1451
NsiI ATGCAT 2 cut(s) 763, 927
PctI GAATGC 1 cut(s) 1400
PdmI GAANNNNTTC 1 cut(s) 705
PfeI GAWTC 4 cut(s) 134, 536, 790, 1157
PkrI GCNGC 6 cut(s) 169, 683, 1252, 1540, 1549, 1552
PleI GAGTC 2 cut(s) 415, 878
PpsI GAGTC 2 cut(s) 415, 878
Psp6I CCWGG 2 cut(s) 143, 435
PspEI GGTNACC 1 cut(s) 812
PspFI CCCAGC 1 cut(s) 323
PspGI CCWGG 2 cut(s) 143, 435
PspN4I GGNNCC 2 cut(s) 30, 1099
PspPI GGNCC 2 cut(s) 964, 1114
PsrI GAACNNNNNNTAC 2 cut(s) 690, 722
PsuI RGATCY 2 cut(s) 259, 1354
PvuII CAGCTG 2 cut(s) 170, 1253
RsaI GTAC 2 cut(s) 774, 822
RsaNI GTAC 2 cut(s) 773, 821
RseI CAYNNNNRTG 2 cut(s) 730, 1604
SaqAI TTAA 5 cut(s) 99, 957, 1035, 1334, 1641
SatI GCNGC 6 cut(s) 168, 682, 1251, 1539, 1548, 1551
Sau96I GGNCC 2 cut(s) 964, 1114
ScaI AGTACT 1 cut(s) 822
SchI GAGTC 2 cut(s) 416, 879
ScrFI CCNGG 2 cut(s) 145, 437
SduI GDGCHC 1 cut(s) 1576
SfaNI GCATC 3 cut(s) 748, 1033, 1291
SfcI CTRYAG 2 cut(s) 69, 477
SgrAI CRCCGGYG 1 cut(s) 16
SmiMI CAYNNNNRTG 2 cut(s) 730, 1604
SmlI CTYRAG 4 cut(s) 98, 282, 1034, 1542
SmoI CTYRAG 4 cut(s) 98, 282, 1034, 1542
Sse9I AATT 8 cut(s) 187, 543, 795, 904, 950, 991, 1242, 1527
SsiI CCGC 8 cut(s) 20, 26, 119, 161, 682, 938, 1550, 1553
SspI AATATT 1 cut(s) 88
SspMI CTAG 2 cut(s) 968, 998
StyD4I CCNGG 2 cut(s) 143, 435
StyI CCWWGG 3 cut(s) 589, 1191, 1340
TaaI ACNGT 9 cut(s) 116, 497, 676, 772, 856, 1028, 1093, 1151, 1606
TaqI TCGA 2 cut(s) 1222, 1378
TaqII GACCGA 2 cut(s) 220, 831
TasI AATT 8 cut(s) 187, 543, 795, 904, 950, 991, 1242, 1527
TatI WGTACW 1 cut(s) 820
TauI GCSGC 2 cut(s) 684, 1553
TfiI GAWTC 4 cut(s) 134, 536, 790, 1157
Tru1I TTAA 5 cut(s) 99, 957, 1035, 1334, 1641
Tru9I TTAA 5 cut(s) 99, 957, 1035, 1334, 1641
TseFI GTSAC 4 cut(s) 12, 139, 812, 1451
TseI GCWGC 4 cut(s) 167, 1250, 1538, 1547
Tsp45I GTSAC 4 cut(s) 12, 139, 812, 1451
TspDTI ATGAA 7 cut(s) 98, 222, 378, 848, 1245, 1407, 1455
Vha464I CTTAAG 2 cut(s) 98, 1034
XapI RAATTY 1 cut(s) 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 1108
XmnI GAANNNNTTC 1 cut(s) 705
XspI CTAG 2 cut(s) 968, 998
ZrmI AGTACT 1 cut(s) 822
Zsp2I ATGCAT 2 cut(s) 763, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.