PITH domain-containing protein 1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25950 AT2G25950 |
| fragaria_vesca | FvH4_2g32150 |
| malus_domestica | MD08G1044700.v1.1 MD08G1045300.v1.1 |
| prunus_persica | Prupe.1G414600_v2.0.a1 |
| pyrus_communis | pycom08g03600 pycom15g05770 |
| rosa_chinensis | RchiOBHm_Chr6g0310531 |
| rosa_laevigata | RLG00000010475 |
| rosa_multiflora | Rmu_sc0001801.1_g000025 Rmu_sc0016392.1_g000005 Rmu_sc0020729.1_g000002 Rmu_sc0035020.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00158450 |
| rosa_rugosa | Rorug06G0381300 |
| rosa_samantha | Rh1BG171900 Rh1BG221900 Rh6AG495200 Rh6BG504800 Rh6CG510100 Rh6DG496100 |
| rosa_wichuraiana | Rw6G043070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 104, 258 |
| AclWI | GGATC | 1 cut(s) | 185 |
| AcoI | YGGCCR | 1 cut(s) | 423 |
| AcsI | RAATTY | 2 cut(s) | 154, 370 |
| AcuI | CTGAAG | 1 cut(s) | 603 |
| AfaI | GTAC | 2 cut(s) | 392, 482 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 82 |
| AflIII | ACRYGT | 1 cut(s) | 601 |
| AgsI | TTSAA | 5 cut(s) | 97, 332, 377, 416, 514 |
| AjnI | CCWGG | 1 cut(s) | 109 |
| AluBI | AGCT | 2 cut(s) | 24, 137 |
| AluI | AGCT | 2 cut(s) | 24, 137 |
| Alw26I | GTCTC | 1 cut(s) | 60 |
| AlwI | GGATC | 1 cut(s) | 185 |
| Ama87I | CYCGRG | 1 cut(s) | 194 |
| AoxI | GGCC | 2 cut(s) | 423, 551 |
| ApeKI | GCWGC | 1 cut(s) | 24 |
| ApoI | RAATTY | 2 cut(s) | 154, 370 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 372 |
| AsuHPI | GGTGA | 2 cut(s) | 200, 473 |
| AvaI | CYCGRG | 1 cut(s) | 194 |
| BalI | TGGCCA | 1 cut(s) | 425 |
| BbvI | GCAGC | 1 cut(s) | 11 |
| BccI | CCATC | 1 cut(s) | 302 |
| BceAI | ACGGC | 1 cut(s) | 164 |
| BciT130I | CCWGG | 1 cut(s) | 111 |
| BcoDI | GTCTC | 1 cut(s) | 60 |
| BfaI | CTAG | 1 cut(s) | 279 |
| BisI | GCNGC | 1 cut(s) | 25 |
| BlsI | GCNGC | 1 cut(s) | 26 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| BmeT110I | CYCGRG | 1 cut(s) | 194 |
| BmiI | GGNNCC | 1 cut(s) | 108 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BmrI | ACTGGG | 1 cut(s) | 171 |
| BmsI | GCATC | 1 cut(s) | 438 |
| BmuI | ACTGGG | 1 cut(s) | 171 |
| BsaI | GGTCTC | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 1 cut(s) | 81 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 82 |
| Bse1I | ACTGG | 1 cut(s) | 166 |
| Bse3DI | GCAATG | 2 cut(s) | 187, 434 |
| BseBI | CCWGG | 1 cut(s) | 111 |
| BseDI | CCNNGG | 1 cut(s) | 81 |
| BseGI | GGATG | 1 cut(s) | 526 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BseMI | GCAATG | 2 cut(s) | 187, 434 |
| BseMII | CTCAG | 2 cut(s) | 521, 562 |
| BseNI | ACTGG | 1 cut(s) | 166 |
| BseXI | GCAGC | 1 cut(s) | 11 |
| BshFI | GGCC | 2 cut(s) | 425, 553 |
| BsiHKCI | CYCGRG | 1 cut(s) | 194 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 82 |
| BsmAI | GTCTC | 1 cut(s) | 60 |
| BsmI | GAATGC | 1 cut(s) | 342 |
| BsnI | GGCC | 2 cut(s) | 425, 553 |
| Bso31I | GGTCTC | 1 cut(s) | 60 |
| BsoBI | CYCGRG | 1 cut(s) | 194 |
| Bsp143I | GATC | 3 cut(s) | 190, 234, 565 |
| BspACI | CCGC | 2 cut(s) | 104, 258 |
| BspANI | GGCC | 2 cut(s) | 425, 553 |
| BspCNI | CTCAG | 2 cut(s) | 520, 561 |
| BspLI | GGNNCC | 1 cut(s) | 108 |
| BspPI | GGATC | 1 cut(s) | 185 |
| BspQI | GCTCTTC | 1 cut(s) | 24 |
| BspTNI | GGTCTC | 1 cut(s) | 60 |
| BsrDI | GCAATG | 2 cut(s) | 187, 434 |
| BsrI | ACTGG | 1 cut(s) | 166 |
| BssECI | CCNNGG | 1 cut(s) | 81 |
| BssMI | GATC | 3 cut(s) | 190, 234, 565 |
| BssT1I | CCWWGG | 1 cut(s) | 81 |
| Bst2UI | CCWGG | 1 cut(s) | 111 |
| Bst6I | CTCTTC | 2 cut(s) | 24, 509 |
| BstC8I | GCNNGC | 3 cut(s) | 7, 342, 427 |
| BstDEI | CTNAG | 3 cut(s) | 471, 507, 548 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 80 |
| BstF5I | GGATG | 1 cut(s) | 526 |
| BstKTI | GATC | 3 cut(s) | 193, 237, 568 |
| BstMAI | GTCTC | 1 cut(s) | 60 |
| BstMBI | GATC | 3 cut(s) | 190, 234, 565 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 495 |
| BstNI | CCWGG | 1 cut(s) | 111 |
| BstNSI | RCATGY | 1 cut(s) | 605 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BstV1I | GCAGC | 1 cut(s) | 11 |
| BsuRI | GGCC | 2 cut(s) | 425, 553 |
| BtsCI | GGATG | 1 cut(s) | 526 |
| Cac8I | GCNNGC | 3 cut(s) | 7, 342, 427 |
| Csp6I | GTAC | 2 cut(s) | 391, 481 |
| CviAII | CATG | 3 cut(s) | 14, 35, 602 |
| CviQI | GTAC | 2 cut(s) | 391, 481 |
| DdeI | CTNAG | 3 cut(s) | 471, 507, 548 |
| DpnI | GATC | 3 cut(s) | 192, 236, 567 |
| DpnII | GATC | 3 cut(s) | 190, 234, 565 |
| DraI | TTTAAA | 2 cut(s) | 133, 493 |
| EaeI | YGGCCR | 1 cut(s) | 423 |
| Eam1104I | CTCTTC | 2 cut(s) | 24, 509 |
| EarI | CTCTTC | 2 cut(s) | 24, 509 |
| Eco130I | CCWWGG | 1 cut(s) | 81 |
| Eco31I | GGTCTC | 1 cut(s) | 60 |
| Eco57I | CTGAAG | 1 cut(s) | 603 |
| Eco88I | CYCGRG | 1 cut(s) | 194 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 80 |
| EcoRI | GAATTC | 1 cut(s) | 154 |
| EcoRII | CCWGG | 1 cut(s) | 109 |
| EcoT14I | CCWWGG | 1 cut(s) | 81 |
| ErhI | CCWWGG | 1 cut(s) | 81 |
| FaeI | CATG | 3 cut(s) | 17, 38, 605 |
| FaiI | YATR | 7 cut(s) | 15, 36, 69, 71, 245, 543, 603 |
| FatI | CATG | 3 cut(s) | 13, 34, 601 |
| Fnu4HI | GCNGC | 1 cut(s) | 25 |
| FokI | GGATG | 1 cut(s) | 533 |
| Fsp4HI | GCNGC | 1 cut(s) | 25 |
| FspBI | CTAG | 1 cut(s) | 279 |
| GluI | GCNGC | 1 cut(s) | 25 |
| HaeIII | GGCC | 2 cut(s) | 425, 553 |
| Hin1II | CATG | 3 cut(s) | 17, 38, 605 |
| HindIII | AAGCTT | 1 cut(s) | 135 |
| HphI | GGTGA | 2 cut(s) | 200, 473 |
| Hpy166II | GTNNAC | 1 cut(s) | 208 |
| Hpy188I | TCNGA | 4 cut(s) | 49, 226, 325, 565 |
| Hpy188III | TCNNGA | 5 cut(s) | 194, 232, 238, 350, 446 |
| Hpy8I | GTNNAC | 1 cut(s) | 208 |
| HpyAV | CCTTC | 2 cut(s) | 570, 578 |
| HpyCH4IV | ACGT | 1 cut(s) | 420 |
| HpyCH4V | TGCA | 3 cut(s) | 340, 439, 530 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 495 |
| HpyF3I | CTNAG | 3 cut(s) | 471, 507, 548 |
| HpySE526I | ACGT | 1 cut(s) | 420 |
| Hsp92II | CATG | 3 cut(s) | 17, 38, 605 |
| Kzo9I | GATC | 3 cut(s) | 190, 234, 565 |
| LguI | GCTCTTC | 1 cut(s) | 24 |
| LmnI | GCTCC | 1 cut(s) | 142 |
| LpnPI | CCDG | 8 cut(s) | 96, 123, 147, 335, 407, 439, 459, 535 |
| Lsp1109I | GCAGC | 1 cut(s) | 11 |
| LweI | GCATC | 1 cut(s) | 438 |
| MaeI | CTAG | 1 cut(s) | 279 |
| MaeII | ACGT | 1 cut(s) | 420 |
| MaeIII | GTNAC | 1 cut(s) | 198 |
| MalI | GATC | 3 cut(s) | 192, 236, 567 |
| MboI | GATC | 3 cut(s) | 190, 234, 565 |
| MboII | GAAGA | 3 cut(s) | 36, 41, 526 |
| MfeI | CAATTG | 1 cut(s) | 534 |
| MlsI | TGGCCA | 1 cut(s) | 425 |
| MluCI | AATT | 4 cut(s) | 154, 249, 370, 534 |
| MluNI | TGGCCA | 1 cut(s) | 425 |
| MmeI | TCCRAC | 1 cut(s) | 366 |
| MnlI | CCTC | 6 cut(s) | 86, 94, 178, 282, 493, 510 |
| Mox20I | TGGCCA | 1 cut(s) | 425 |
| MroXI | GAANNNNTTC | 1 cut(s) | 372 |
| MscI | TGGCCA | 1 cut(s) | 425 |
| MseI | TTAA | 2 cut(s) | 132, 492 |
| Msp20I | TGGCCA | 1 cut(s) | 425 |
| MspA1I | CMGCKG | 1 cut(s) | 24 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MunI | CAATTG | 1 cut(s) | 534 |
| Mva1269I | GAATGC | 1 cut(s) | 342 |
| MvaI | CCWGG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 495 |
| NdeII | GATC | 3 cut(s) | 190, 234, 565 |
| NlaIII | CATG | 3 cut(s) | 17, 38, 605 |
| NlaIV | GGNNCC | 1 cut(s) | 108 |
| NspI | RCATGY | 1 cut(s) | 605 |
| PciI | ACATGT | 1 cut(s) | 601 |
| PciSI | GCTCTTC | 1 cut(s) | 24 |
| PctI | GAATGC | 1 cut(s) | 342 |
| PdmI | GAANNNNTTC | 1 cut(s) | 372 |
| PfoI | TCCNGGA | 1 cut(s) | 109 |
| PkrI | GCNGC | 1 cut(s) | 26 |
| PscI | ACATGT | 1 cut(s) | 601 |
| Psp6I | CCWGG | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 109 |
| PspN4I | GGNNCC | 1 cut(s) | 108 |
| PvuII | CAGCTG | 1 cut(s) | 24 |
| RsaI | GTAC | 2 cut(s) | 392, 482 |
| RsaNI | GTAC | 2 cut(s) | 391, 481 |
| SapI | GCTCTTC | 1 cut(s) | 24 |
| SaqAI | TTAA | 2 cut(s) | 132, 492 |
| SatI | GCNGC | 1 cut(s) | 25 |
| Sau3AI | GATC | 3 cut(s) | 190, 234, 565 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SetI | ASST | 7 cut(s) | 26, 78, 87, 139, 404, 423, 589 |
| SfaNI | GCATC | 1 cut(s) | 438 |
| Sse9I | AATT | 4 cut(s) | 154, 249, 370, 534 |
| SsiI | CCGC | 2 cut(s) | 104, 258 |
| SspMI | CTAG | 1 cut(s) | 279 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| StyI | CCWWGG | 1 cut(s) | 81 |
| TaiI | ACGT | 1 cut(s) | 423 |
| TaqI | TCGA | 1 cut(s) | 366 |
| TasI | AATT | 4 cut(s) | 154, 249, 370, 534 |
| TatI | WGTACW | 1 cut(s) | 480 |
| Tru1I | TTAA | 2 cut(s) | 132, 492 |
| Tru9I | TTAA | 2 cut(s) | 132, 492 |
| TseI | GCWGC | 1 cut(s) | 24 |
| TspDTI | ATGAA | 2 cut(s) | 286, 558 |
| TspGWI | ACGGA | 1 cut(s) | 282 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 80 |
| XapI | RAATTY | 2 cut(s) | 154, 370 |
| XceI | RCATGY | 1 cut(s) | 605 |
| XmnI | GAANNNNTTC | 1 cut(s) | 372 |
| XspI | CTAG | 1 cut(s) | 279 |