Belongs to the GRAS family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25950 AT2G25950 |
| fragaria_vesca | FvH4_2g32150 |
| malus_domestica | MD08G1044700.v1.1 MD08G1045300.v1.1 |
| prunus_persica | Prupe.1G414600_v2.0.a1 |
| pyrus_communis | pycom08g03600 pycom15g05770 |
| rosa_chinensis | RchiOBHm_Chr6g0310531 |
| rosa_laevigata | RLG00000010475 |
| rosa_multiflora | Rmu_sc0001801.1_g000025 Rmu_sc0016392.1_g000005 Rmu_sc0020729.1_g000002 Rmu_sc0035020.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00158450 |
| rosa_rugosa | Rorug06G0381300 |
| rosa_samantha | Rh1BG171900 Rh1BG221900 Rh6AG495200 Rh6BG504800 Rh6CG510100 Rh6DG496100 |
| rosa_wichuraiana | Rw6G043070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 315 |
| AclWI | GGATC | 1 cut(s) | 12 |
| AcyI | GRCGYC | 2 cut(s) | 298, 310 |
| AfaI | GTAC | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 173 |
| AgsI | TTSAA | 2 cut(s) | 52, 153 |
| AjnI | CCWGG | 1 cut(s) | 304 |
| AluBI | AGCT | 1 cut(s) | 115 |
| AluI | AGCT | 1 cut(s) | 115 |
| AlwI | GGATC | 1 cut(s) | 12 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 227 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BciT130I | CCWGG | 1 cut(s) | 306 |
| BglII | AGATCT | 1 cut(s) | 124 |
| Bme1390I | CCNGG | 1 cut(s) | 306 |
| BmiI | GGNNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 306 |
| BpmI | CTGGAG | 1 cut(s) | 105 |
| Bpu10I | CCTNAGC | 1 cut(s) | 162 |
| BsaBI | GATNNNNATC | 1 cut(s) | 51 |
| BsaHI | GRCGYC | 2 cut(s) | 298, 310 |
| BsaWI | WCCGGW | 1 cut(s) | 173 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 207, 237 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 173 |
| Bse1I | ACTGG | 2 cut(s) | 22, 298 |
| Bse8I | GATNNNNATC | 1 cut(s) | 51 |
| BseBI | CCWGG | 1 cut(s) | 306 |
| BseJI | GATNNNNATC | 1 cut(s) | 51 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 173 |
| BseMII | CTCAG | 1 cut(s) | 153 |
| BseNI | ACTGG | 2 cut(s) | 22, 298 |
| BsiSI | CCGG | 2 cut(s) | 167, 174 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 173 |
| Bsp143I | GATC | 2 cut(s) | 4, 124 |
| BspCNI | CTCAG | 1 cut(s) | 154 |
| BspHI | TCATGA | 1 cut(s) | 33 |
| BspLI | GGNNCC | 1 cut(s) | 6 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BsrI | ACTGG | 2 cut(s) | 22, 298 |
| BssMI | GATC | 2 cut(s) | 4, 124 |
| BssNI | GRCGYC | 2 cut(s) | 298, 310 |
| Bst2UI | CCWGG | 1 cut(s) | 306 |
| Bst4CI | ACNGT | 2 cut(s) | 202, 241 |
| BstACI | GRCGYC | 2 cut(s) | 298, 310 |
| BstDEI | CTNAG | 1 cut(s) | 162 |
| BstKTI | GATC | 2 cut(s) | 7, 127 |
| BstMBI | GATC | 2 cut(s) | 4, 124 |
| BstNI | CCWGG | 1 cut(s) | 306 |
| BstSCI | CCNGG | 1 cut(s) | 304 |
| BstX2I | RGATCY | 2 cut(s) | 4, 124 |
| BstYI | RGATCY | 2 cut(s) | 4, 124 |
| BtsIMutI | CAGTG | 2 cut(s) | 15, 237 |
| CaiI | CAGNNNCTG | 1 cut(s) | 227 |
| CciI | TCATGA | 1 cut(s) | 33 |
| CseI | GACGC | 3 cut(s) | 306, 318, 351 |
| Csp6I | GTAC | 1 cut(s) | 100 |
| CviAII | CATG | 2 cut(s) | 34, 58 |
| CviJI | RGCY | 3 cut(s) | 115, 166, 246 |
| CviKI_1 | RGCY | 3 cut(s) | 115, 166, 246 |
| CviQI | GTAC | 1 cut(s) | 100 |
| DdeI | CTNAG | 1 cut(s) | 162 |
| DpnI | GATC | 2 cut(s) | 6, 126 |
| DpnII | GATC | 2 cut(s) | 4, 124 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 315 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 315 |
| EcoRII | CCWGG | 1 cut(s) | 304 |
| FaeI | CATG | 2 cut(s) | 37, 61 |
| FaiI | YATR | 2 cut(s) | 35, 59 |
| FatI | CATG | 2 cut(s) | 33, 57 |
| GsuI | CTGGAG | 1 cut(s) | 105 |
| HapII | CCGG | 2 cut(s) | 167, 174 |
| HgaI | GACGC | 3 cut(s) | 306, 318, 351 |
| Hin1I | GRCGYC | 2 cut(s) | 298, 310 |
| Hin1II | CATG | 2 cut(s) | 37, 61 |
| HincII | GTYRAC | 1 cut(s) | 320 |
| HindII | GTYRAC | 1 cut(s) | 320 |
| HinfI | GANTC | 5 cut(s) | 21, 170, 257, 352, 366 |
| HpaII | CCGG | 2 cut(s) | 167, 174 |
| Hpy166II | GTNNAC | 1 cut(s) | 320 |
| Hpy188I | TCNGA | 2 cut(s) | 271, 289 |
| Hpy188III | TCNNGA | 4 cut(s) | 34, 122, 339, 370 |
| Hpy8I | GTNNAC | 1 cut(s) | 320 |
| Hpy99I | CGWCG | 1 cut(s) | 345 |
| HpyAV | CCTTC | 1 cut(s) | 323 |
| HpyCH4III | ACNGT | 2 cut(s) | 202, 241 |
| HpyF3I | CTNAG | 1 cut(s) | 162 |
| Hsp92I | GRCGYC | 2 cut(s) | 298, 310 |
| Hsp92II | CATG | 2 cut(s) | 37, 61 |
| Kzo9I | GATC | 2 cut(s) | 4, 124 |
| MaeIII | GTNAC | 1 cut(s) | 60 |
| MalI | GATC | 2 cut(s) | 6, 126 |
| MboI | GATC | 2 cut(s) | 4, 124 |
| MflI | RGATCY | 2 cut(s) | 4, 124 |
| MluCI | AATT | 4 cut(s) | 67, 77, 153, 192 |
| MlyI | GAGTC | 2 cut(s) | 15, 361 |
| MmeI | TCCRAC | 1 cut(s) | 32 |
| MnlI | CCTC | 3 cut(s) | 205, 209, 277 |
| MseI | TTAA | 2 cut(s) | 108, 376 |
| MspI | CCGG | 2 cut(s) | 167, 174 |
| MspR9I | CCNGG | 1 cut(s) | 306 |
| MvaI | CCWGG | 1 cut(s) | 306 |
| NdeII | GATC | 2 cut(s) | 4, 124 |
| NlaIII | CATG | 2 cut(s) | 37, 61 |
| NlaIV | GGNNCC | 1 cut(s) | 6 |
| PagI | TCATGA | 1 cut(s) | 33 |
| PfeI | GAWTC | 3 cut(s) | 170, 257, 366 |
| PleI | GAGTC | 2 cut(s) | 15, 360 |
| PpsI | GAGTC | 2 cut(s) | 15, 360 |
| Psp6I | CCWGG | 1 cut(s) | 304 |
| PspGI | CCWGG | 1 cut(s) | 304 |
| PspN4I | GGNNCC | 1 cut(s) | 6 |
| PstNI | CAGNNNCTG | 1 cut(s) | 227 |
| PsuI | RGATCY | 2 cut(s) | 4, 124 |
| RsaI | GTAC | 1 cut(s) | 101 |
| RsaNI | GTAC | 1 cut(s) | 100 |
| SaqAI | TTAA | 2 cut(s) | 108, 376 |
| Sau3AI | GATC | 2 cut(s) | 4, 124 |
| SchI | GAGTC | 2 cut(s) | 15, 361 |
| ScrFI | CCNGG | 1 cut(s) | 306 |
| SetI | ASST | 4 cut(s) | 117, 163, 220, 307 |
| Sse9I | AATT | 4 cut(s) | 67, 77, 153, 192 |
| StyD4I | CCNGG | 1 cut(s) | 304 |
| TaaI | ACNGT | 2 cut(s) | 202, 241 |
| TaqI | TCGA | 2 cut(s) | 340, 369 |
| TasI | AATT | 4 cut(s) | 67, 77, 153, 192 |
| TfiI | GAWTC | 3 cut(s) | 170, 257, 366 |
| Tru1I | TTAA | 2 cut(s) | 108, 376 |
| Tru9I | TTAA | 2 cut(s) | 108, 376 |
| TscAI | CASTG | 2 cut(s) | 22, 244 |
| TspDTI | ATGAA | 3 cut(s) | 22, 50, 60 |
| TspGWI | ACGGA | 1 cut(s) | 252 |
| TspRI | CASTG | 2 cut(s) | 22, 244 |