Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006917

Physical Location & Seq

Genomic Coordinates Forward (+)

36610493 .. 36612464

Gene Structure 1972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G425200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 849 bp

ATGGAGCTAGTACAGGACCTGTTTTTGACGGCGTCTTTCGCGCTGATTCTCTCTTTCCTGGTTGCGAAGCTCGTTGCCATGGCGGTGGCTGGCCGTCAATCGGAAGCGGAGTTCAGAGAGTGTGAGAATGCCGGTGGAGGTGTTGTTTTGGAGGAGGTGAGTTTCGAAGAGAGGAGACTGAAAGTGGAAAAGGCTTTTCACGGCCAGAGGAGGGTTGAGTTCGTCGGAGAAGTAAAGGAGGTCGATCAATTTCAATTCGAAGACAAACCGGTTCATCGAGTTGAGGAAATTGAAGAAACACTGCAGCATCATGAAGAAGGTCGTGAATTGACGGAGAAGGTGTTGGAGGAAGAAGGTTTGGGAGGAGAAGAGTCGGTGGCCGTCGGATTGCCGGAGAATCCATCGTACGGCGAGGAGAAGGTGTCGGTTGAGAAAGCGAGAGACTTCGATCATCAAAACTTGGAGAACAGAGAAGTTGAAGAAATTGGGGCGGAATCAGCAACGAACGACGTCGTTACTGCACAATCTGAGGAGCTTAGTGCTGTGGCTTTCGATGAAGCAAAGGGAAAGAGCGAAGCGAATGAGATTAAACTGAAAGCTACCGACTTTGATCGTGAACGTGGCCACGAGGCTCAGCAAAGCTCGGAGAAGAGAGGAGTTGAAGAAATTGGCGCTGAATCAGCAACAAACGATGTCGTTTCTGCACAACCTGAGGAAGTTAGGGCTGAGGCACACGTGGCCAGTGAGGTTAAATTCAACAATTATAGTGATGAGGATGATTGGGAAGGGATTGAGAAGAGTGAGTTGGATGATGATTTTACTGCTGCTGTGAAATTTGAAGGACGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000062 GO:0000166 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005615 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033218 GO:0036094 GO:0043167 GO:0043168 GO:0044421 GO:0048037 GO:0050662 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901567 GO:1901681

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ACBP

Protein Analysis

283

Amino Acids

31.49

Weight (kDa)

4.41

Isoelectric Point (pI)

50.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006917)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g33320
malus_domestica	MD08G1087700.v1.1 MD15G1072600.v1.1
prunus_persica	Prupe.1G425200_v2.0.a1
pyrus_communis	pycom08g07150
rosa_chinensis	RchiOBHm_Chr6g0309301
rosa_laevigata	RLG00000010575 RLG00000029443
rosa_multiflora	Rmu_sc0007504.1_g000003 Rmu_sc0007504.1_g000004 Rmu_sc0015692.1_g000004
rosa_roxburghii	Rroxscaffold_7G00159510
rosa_rugosa	Rorug06G0370700
rosa_samantha	Rh1DG111900 Rh3BG311700 Rh3BG334700 Rh4AG060200 Rh5BG475300 Rh5CG498900 Rh6AG131300 Rh6AG484200 Rh6BG493300 Rh6CG498100 Rh6DG484700 Rh7DG430900
rosa_wichuraiana	Rw6G042150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	513
AccII	CGCG	1 cut(s)	41
AciI	CCGC	3 cut(s)	83, 107, 491
AcoI	YGGCCR	5 cut(s)	91, 202, 378, 622, 738
AcsI	RAATTY	2 cut(s)	752, 833
AcvI	CACGTG	1 cut(s)	736
AcyI	GRCGYC	2 cut(s)	32, 510
AfaI	GTAC	2 cut(s)	12, 407
AfiI	CCNNNNNNNGG	3 cut(s)	100, 211, 407
AflIII	ACRYGT	1 cut(s)	733
AgeI	ACCGGT	1 cut(s)	268
AgsI	TTSAA	6 cut(s)	254, 293, 479, 662, 757, 839
AjnI	CCWGG	1 cut(s)	57
AjuI	GAANNNNNNNTTGG	2 cut(s)	788, 820
AloI	GAACNNNNNNTCC	2 cut(s)	95, 127
AluBI	AGCT	5 cut(s)	7, 70, 535, 599, 642
AluI	AGCT	5 cut(s)	7, 70, 535, 599, 642
Alw26I	GTCTC	2 cut(s)	169, 435
AlwNI	CAGNNNCTG	1 cut(s)	19
AoxI	GGCC	5 cut(s)	91, 202, 378, 622, 738
ApeKI	GCWGC	2 cut(s)	304, 824
ApoI	RAATTY	2 cut(s)	752, 833
AsiGI	ACCGGT	1 cut(s)	268
AspLEI	GCGC	2 cut(s)	43, 674
AspS9I	GGNCC	1 cut(s)	16
AsuHPI	GGTGA	1 cut(s)	169
AsuII	TTCGAA	2 cut(s)	165, 258
AvaII	GGWCC	1 cut(s)	16
AxyI	CCTNAGG	1 cut(s)	711
BalI	TGGCCA	2 cut(s)	624, 740
BauI	CACGAG	1 cut(s)	626
BbrPI	CACGTG	1 cut(s)	736
BbsI	GAAGAC	1 cut(s)	267
BbvCI	CCTCAGC	1 cut(s)	726
BbvI	GCAGC	2 cut(s)	316, 811
BccI	CCATC	1 cut(s)	409
BceAI	ACGGC	5 cut(s)	45, 78, 217, 365, 424
BciT130I	CCWGG	1 cut(s)	59
BcoDI	GTCTC	2 cut(s)	169, 435
BfaI	CTAG	1 cut(s)	8
BfmI	CTRYAG	1 cut(s)	302
BfoI	RGCGCY	1 cut(s)	675
BisI	GCNGC	2 cut(s)	305, 825
BlpI	GCTNAGC	1 cut(s)	633
BlsI	GCNGC	2 cut(s)	306, 826
Bme1390I	CCNGG	1 cut(s)	59
Bme18I	GGWCC	1 cut(s)	16
BmgT120I	GGNCC	1 cut(s)	16
BmrFI	CCNGG	1 cut(s)	59
BmsI	GCATC	1 cut(s)	316
BpiI	GAAGAC	1 cut(s)	267
Bpu10I	CCTNAGC	1 cut(s)	726
Bpu1102I	GCTNAGC	1 cut(s)	633
Bpu14I	TTCGAA	2 cut(s)	165, 258
BsaAI	YACGTR	1 cut(s)	736
BsaHI	GRCGYC	2 cut(s)	32, 510
BsaJI	CCNNGG	1 cut(s)	78
BsaWI	WCCGGW	1 cut(s)	268
BsaXI	ACNNNNNCTCC	6 cut(s)	129, 159, 326, 356, 407, 437
Bsc4I	CCNNNNNNNGG	3 cut(s)	100, 211, 407
Bse118I	RCCGGY	2 cut(s)	131, 268
Bse1I	ACTGG	1 cut(s)	741
Bse21I	CCTNAGG	1 cut(s)	711
BseBI	CCWGG	1 cut(s)	59
BseDI	CCNNGG	1 cut(s)	78
BseGI	GGATG	2 cut(s)	781, 814
BseLI	CCNNNNNNNGG	3 cut(s)	100, 211, 407
BseMII	CTCAG	4 cut(s)	519, 647, 702, 717
BseNI	ACTGG	1 cut(s)	741
BseRI	GAGGAG	7 cut(s)	167, 187, 223, 378, 428, 545, 669
BseXI	GCAGC	2 cut(s)	316, 811
BsgI	GTGCAG	2 cut(s)	504, 687
Bsh1236I	CGCG	1 cut(s)	41
BshFI	GGCC	5 cut(s)	93, 204, 380, 624, 740
BshTI	ACCGGT	1 cut(s)	268
BsiSI	CCGG	3 cut(s)	132, 269, 392
BsiWI	CGTACG	1 cut(s)	405
BslI	CCNNNNNNNGG	3 cut(s)	100, 211, 407
BsmAI	GTCTC	2 cut(s)	169, 435
BsmI	GAATGC	1 cut(s)	133
BsnI	GGCC	5 cut(s)	93, 204, 380, 624, 740
Bsp119I	TTCGAA	2 cut(s)	165, 258
Bsp143I	GATC	3 cut(s)	244, 448, 610
Bsp1720I	GCTNAGC	1 cut(s)	633
Bsp19I	CCATGG	1 cut(s)	78
BspACI	CCGC	3 cut(s)	83, 107, 491
BspANI	GGCC	5 cut(s)	93, 204, 380, 624, 740
BspCNI	CTCAG	4 cut(s)	520, 646, 703, 718
BspFNI	CGCG	1 cut(s)	41
BspHI	TCATGA	1 cut(s)	310
BspMAI	CTGCAG	1 cut(s)	306
BspT104I	TTCGAA	2 cut(s)	165, 258
BsrFI	RCCGGY	2 cut(s)	131, 268
BsrI	ACTGG	1 cut(s)	741
BssAI	RCCGGY	2 cut(s)	131, 268
BssECI	CCNNGG	1 cut(s)	78
BssMI	GATC	3 cut(s)	244, 448, 610
BssNI	GRCGYC	2 cut(s)	32, 510
BssSI	CACGAG	1 cut(s)	626
BssT1I	CCWWGG	1 cut(s)	78
Bst2BI	CACGAG	1 cut(s)	626
Bst2UI	CCWGG	1 cut(s)	59
Bst6I	CTCTTC	4 cut(s)	162, 363, 644, 791
BstACI	GRCGYC	2 cut(s)	32, 510
BstBAI	YACGTR	1 cut(s)	736
BstBI	TTCGAA	2 cut(s)	165, 258
BstC8I	GCNNGC	1 cut(s)	91
BstDEI	CTNAG	5 cut(s)	528, 536, 633, 711, 726
BstDSI	CCRYGG	1 cut(s)	78
BstF5I	GGATG	2 cut(s)	781, 814
BstFNI	CGCG	1 cut(s)	41
BstH2I	RGCGCY	1 cut(s)	675
BstHHI	GCGC	2 cut(s)	43, 674
BstKTI	GATC	3 cut(s)	247, 451, 613
BstMAI	GTCTC	2 cut(s)	169, 435
BstMBI	GATC	3 cut(s)	244, 448, 610
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 497, 680, 737
BstNI	CCWGG	1 cut(s)	59
BstSCI	CCNGG	1 cut(s)	57
BstSFI	CTRYAG	1 cut(s)	302
BstUI	CGCG	1 cut(s)	41
BstV1I	GCAGC	2 cut(s)	316, 811
BstV2I	GAAGAC	1 cut(s)	267
BstXI	CCANNNNNNTGG	1 cut(s)	85
Bsu36I	CCTNAGG	1 cut(s)	711
BsuRI	GGCC	5 cut(s)	93, 204, 380, 624, 740
BtgI	CCRYGG	1 cut(s)	78
BtsCI	GGATG	2 cut(s)	781, 814
BtsI	GCAGTG	1 cut(s)	299
BtsIMutI	CAGTG	2 cut(s)	299, 748
Cac8I	GCNNGC	1 cut(s)	91
CaiI	CAGNNNCTG	1 cut(s)	19
CciI	TCATGA	1 cut(s)	310
CfoI	GCGC	2 cut(s)	43, 674
Cfr10I	RCCGGY	2 cut(s)	131, 268
Cfr13I	GGNCC	1 cut(s)	16
CseI	GACGC	1 cut(s)	21
Csp6I	GTAC	2 cut(s)	11, 406
CspAI	ACCGGT	1 cut(s)	268
CviAII	CATG	2 cut(s)	79, 311
CviQI	GTAC	2 cut(s)	11, 406
DdeI	CTNAG	5 cut(s)	528, 536, 633, 711, 726
DpnI	GATC	3 cut(s)	246, 450, 612
DpnII	GATC	3 cut(s)	244, 448, 610
EaeI	YGGCCR	5 cut(s)	91, 202, 378, 622, 738
Eam1104I	CTCTTC	4 cut(s)	162, 363, 644, 791
EarI	CTCTTC	4 cut(s)	162, 363, 644, 791
EciI	GGCGGA	1 cut(s)	506
Eco130I	CCWWGG	1 cut(s)	78
Eco47I	GGWCC	1 cut(s)	16
Eco72I	CACGTG	1 cut(s)	736
Eco81I	CCTNAGG	1 cut(s)	711
EcoO109I	RGGNCCY	1 cut(s)	16
EcoRII	CCWGG	1 cut(s)	57
EcoT14I	CCWWGG	1 cut(s)	78
ErhI	CCWWGG	1 cut(s)	78
FaeI	CATG	2 cut(s)	82, 314
FaiI	YATR	3 cut(s)	80, 312, 765
FatI	CATG	2 cut(s)	78, 310
Fnu4HI	GCNGC	2 cut(s)	305, 825
FokI	GGATG	2 cut(s)	788, 821
Fsp4HI	GCNGC	2 cut(s)	305, 825
FspBI	CTAG	1 cut(s)	8
GlaI	GCGC	2 cut(s)	42, 673
GluI	GCNGC	2 cut(s)	305, 825
HaeII	RGCGCY	1 cut(s)	675
HaeIII	GGCC	5 cut(s)	93, 204, 380, 624, 740
HapII	CCGG	3 cut(s)	132, 269, 392
HgaI	GACGC	1 cut(s)	21
HhaI	GCGC	2 cut(s)	43, 674
Hin1I	GRCGYC	2 cut(s)	32, 510
Hin1II	CATG	2 cut(s)	82, 314
Hin6I	GCGC	2 cut(s)	41, 672
HinP1I	GCGC	2 cut(s)	41, 672
HinfI	GANTC	5 cut(s)	46, 371, 397, 494, 677
HpaII	CCGG	3 cut(s)	132, 269, 392
HphI	GGTGA	1 cut(s)	169
Hpy166II	GTNNAC	1 cut(s)	617
Hpy188I	TCNGA	6 cut(s)	103, 116, 227, 386, 529, 646
Hpy188III	TCNNGA	3 cut(s)	311, 323, 614
Hpy8I	GTNNAC	1 cut(s)	617
Hpy99I	CGWCG	4 cut(s)	227, 386, 512, 515
HpyAV	CCTTC	6 cut(s)	311, 331, 347, 412, 779, 833
HpyCH4IV	ACGT	3 cut(s)	510, 619, 735
HpyCH4V	TGCA	3 cut(s)	304, 521, 704
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 497, 680, 737
HpyF3I	CTNAG	5 cut(s)	528, 536, 633, 711, 726
HpySE526I	ACGT	3 cut(s)	510, 619, 735
Hsp92I	GRCGYC	2 cut(s)	32, 510
Hsp92II	CATG	2 cut(s)	82, 314
HspAI	GCGC	2 cut(s)	41, 672
Kzo9I	GATC	3 cut(s)	244, 448, 610
LmnI	GCTCC	2 cut(s)	4, 532
Lsp1109I	GCAGC	2 cut(s)	316, 811
LweI	GCATC	1 cut(s)	316
MaeI	CTAG	1 cut(s)	8
MaeII	ACGT	3 cut(s)	510, 619, 735
MaeIII	GTNAC	1 cut(s)	514
MalI	GATC	3 cut(s)	246, 450, 612
MboI	GATC	3 cut(s)	244, 448, 610
MlsI	TGGCCA	2 cut(s)	624, 740
MluCI	AATT	9 cut(s)	248, 254, 288, 326, 483, 666, 752, 760, 833
MluNI	TGGCCA	2 cut(s)	624, 740
MlyI	GAGTC	1 cut(s)	380
MmeI	TCCRAC	4 cut(s)	205, 324, 364, 786
Mox20I	TGGCCA	2 cut(s)	624, 740
MscI	TGGCCA	2 cut(s)	624, 740
MseI	TTAA	2 cut(s)	588, 750
MslI	CAYNNNNRTG	1 cut(s)	83
Msp20I	TGGCCA	2 cut(s)	624, 740
MspI	CCGG	3 cut(s)	132, 269, 392
MspR9I	CCNGG	1 cut(s)	59
Mva1269I	GAATGC	1 cut(s)	133
MvaI	CCWGG	1 cut(s)	59
MvnI	CGCG	1 cut(s)	41
MwoI	GCNNNNNNNGC	4 cut(s)	38, 497, 680, 737
NcoI	CCATGG	1 cut(s)	78
NdeII	GATC	3 cut(s)	244, 448, 610
NlaIII	CATG	2 cut(s)	82, 314
NspV	TTCGAA	2 cut(s)	165, 258
PagI	TCATGA	1 cut(s)	310
PctI	GAATGC	1 cut(s)	133
PfeI	GAWTC	4 cut(s)	46, 397, 494, 677
Pfl23II	CGTACG	1 cut(s)	405
PflFI	GACNNNGTC	1 cut(s)	31
PinAI	ACCGGT	1 cut(s)	268
PkrI	GCNGC	2 cut(s)	306, 826
PleI	GAGTC	1 cut(s)	379
PmaCI	CACGTG	1 cut(s)	736
PmlI	CACGTG	1 cut(s)	736
PpsI	GAGTC	1 cut(s)	379
Ppu21I	YACGTR	1 cut(s)	736
PpuMI	RGGWCCY	1 cut(s)	16
Psp5II	RGGWCCY	1 cut(s)	16
Psp6I	CCWGG	1 cut(s)	57
PspCI	CACGTG	1 cut(s)	736
PspGI	CCWGG	1 cut(s)	57
PspLI	CGTACG	1 cut(s)	405
PspPI	GGNCC	1 cut(s)	16
PspPPI	RGGWCCY	1 cut(s)	16
PstI	CTGCAG	1 cut(s)	306
PstNI	CAGNNNCTG	1 cut(s)	19
PsyI	GACNNNGTC	1 cut(s)	31
RsaI	GTAC	2 cut(s)	12, 407
RsaNI	GTAC	2 cut(s)	11, 406
RseI	CAYNNNNRTG	1 cut(s)	83
SaqAI	TTAA	2 cut(s)	588, 750
SatI	GCNGC	2 cut(s)	305, 825
Sau3AI	GATC	3 cut(s)	244, 448, 610
Sau96I	GGNCC	1 cut(s)	16
SchI	GAGTC	1 cut(s)	380
ScrFI	CCNGG	1 cut(s)	59
SfaNI	GCATC	1 cut(s)	316
SfcI	CTRYAG	1 cut(s)	302
SfuI	TTCGAA	2 cut(s)	165, 258
SinI	GGWCC	1 cut(s)	16
SmiMI	CAYNNNNRTG	1 cut(s)	83
Sse9I	AATT	9 cut(s)	248, 254, 288, 326, 483, 666, 752, 760, 833
SsiI	CCGC	3 cut(s)	83, 107, 491
SspMI	CTAG	1 cut(s)	8
StyD4I	CCNGG	1 cut(s)	57
StyI	CCWWGG	1 cut(s)	78
TaiI	ACGT	3 cut(s)	513, 622, 738
TaqI	TCGA	6 cut(s)	165, 243, 258, 277, 447, 552
TasI	AATT	9 cut(s)	248, 254, 288, 326, 483, 666, 752, 760, 833
TatI	WGTACW	1 cut(s)	10
TfiI	GAWTC	4 cut(s)	46, 397, 494, 677
Tru1I	TTAA	2 cut(s)	588, 750
Tru9I	TTAA	2 cut(s)	588, 750
TscAI	CASTG	2 cut(s)	306, 748
TseI	GCWGC	2 cut(s)	304, 824
TspDTI	ATGAA	3 cut(s)	263, 327, 570
TspGWI	ACGGA	1 cut(s)	347
TspRI	CASTG	2 cut(s)	306, 748
Tth111I	GACNNNGTC	1 cut(s)	31
VpaK11BI	GGWCC	1 cut(s)	16
XapI	RAATTY	2 cut(s)	752, 833
XspI	CTAG	1 cut(s)	8
ZraI	GACGTC	1 cut(s)	511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.